miRNEST 2.0, an integrative microRNA resource :: BLAST
>40405_ahy-MIR408:mirbase
Length = 122
Score = 101 bits (51), Expect = 2e-22
Identities = 61/63 (96%), Gaps = 1/63 (1%)
Strand = Plus / Plus
Query: 16 agaagagatgacaaaga-ctggggacaggcagagcatgaatggaactatcaatagacaca 74
||||||||||||||||| ||||| ||||||||||||||||||||||||||||||||||||
Sbjct: 3 agaagagatgacaaagaactgggaacaggcagagcatgaatggaactatcaatagacaca 62
Query: 75 ttt 77
|||
Sbjct: 63 ttt 65
Score = 87.7 bits (44), Expect = 3e-18
Identities = 47/48 (97%)
Strand = Plus / Plus
Query: 162 acgctcatgcactgcctcttccctggctctctcgttctttttccttct 209
||||||||||||||||||||||||||||||||| ||||||||||||||
Sbjct: 75 acgctcatgcactgcctcttccctggctctctctttctttttccttct 122
>40404_ahy-MIR408:mirbase
Length = 122
Score = 101 bits (51), Expect = 2e-22
Identities = 61/63 (96%), Gaps = 1/63 (1%)
Strand = Plus / Plus
Query: 16 agaagagatgacaaaga-ctggggacaggcagagcatgaatggaactatcaatagacaca 74
||||||||||||||||| ||||| ||||||||||||||||||||||||||||||||||||
Sbjct: 3 agaagagatgacaaagaactgggaacaggcagagcatgaatggaactatcaatagacaca 62
Query: 75 ttt 77
|||
Sbjct: 63 ttt 65
Score = 87.7 bits (44), Expect = 3e-18
Identities = 47/48 (97%)
Strand = Plus / Plus
Query: 162 acgctcatgcactgcctcttccctggctctctcgttctttttccttct 209
||||||||||||||||||||||||||||||||| ||||||||||||||
Sbjct: 75 acgctcatgcactgcctcttccctggctctctctttctttttccttct 122
>41252_csi-MIR408:mirbase
Length = 153
Score = 54.0 bits (27), Expect = 5e-08
Identities = 27/27 (100%)
Strand = Plus / Plus
Query: 167 catgcactgcctcttccctggctctct 193
|||||||||||||||||||||||||||
Sbjct: 119 catgcactgcctcttccctggctctct 145
Score = 42.1 bits (21), Expect = 2e-04
Identities = 30/33 (90%)
Strand = Plus / Plus
Query: 28 aaagactggggacaggcagagcatgaatggaac 60
|||||| ||| |||||||||||||| |||||||
Sbjct: 56 aaagacggggaacaggcagagcatggatggaac 88
>41683_vvi-MIR408:mirbase
Length = 107
Score = 50.1 bits (25), Expect = 7e-07
Identities = 25/25 (100%)
Strand = Plus / Plus
Query: 167 catgcactgcctcttccctggctct 191
|||||||||||||||||||||||||
Sbjct: 76 catgcactgcctcttccctggctct 100
>39490_ppt-MIR408b:mirbase
Length = 144
Score = 50.1 bits (25), Expect = 7e-07
Identities = 25/25 (100%)
Strand = Plus / Plus
Query: 165 ctcatgcactgcctcttccctggct 189
|||||||||||||||||||||||||
Sbjct: 90 ctcatgcactgcctcttccctggct 114
>40108_ath-MIR408:mirbase
Length = 218
Score = 48.1 bits (24), Expect = 3e-06
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 167 catgcactgcctcttccctggctc 190
||||||||||||||||||||||||
Sbjct: 119 catgcactgcctcttccctggctc 142
>39897_aly-MIR408:mirbase
Length = 211
Score = 48.1 bits (24), Expect = 3e-06
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 167 catgcactgcctcttccctggctc 190
||||||||||||||||||||||||
Sbjct: 116 catgcactgcctcttccctggctc 139
>41463_ptc-MIR408:mirbase
Length = 105
Score = 46.1 bits (23), Expect = 1e-05
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 167 catgcactgcctcttccctggct 189
|||||||||||||||||||||||
Sbjct: 75 catgcactgcctcttccctggct 97
>41193_aqc-MIR408:mirbase
Length = 87
Score = 46.1 bits (23), Expect = 1e-05
Identities = 23/23 (100%)
Strand = Plus / Minus
Query: 167 catgcactgcctcttccctggct 189
|||||||||||||||||||||||
Sbjct: 23 catgcactgcctcttccctggct 1
>39428_pta-MIR408:mirbase
Length = 86
Score = 46.1 bits (23), Expect = 1e-05
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 168 atgcactgcctcttccctggctc 190
|||||||||||||||||||||||
Sbjct: 64 atgcactgcctcttccctggctc 86
>42830_zma-MIR408b:mirbase
Length = 147
Score = 44.1 bits (22), Expect = 4e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 169 tgcactgcctcttccctggctc 190
||||||||||||||||||||||
Sbjct: 126 tgcactgcctcttccctggctc 147
>42829_zma-MIR408:mirbase
Length = 191
Score = 44.1 bits (22), Expect = 4e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 169 tgcactgcctcttccctggctc 190
||||||||||||||||||||||
Sbjct: 153 tgcactgcctcttccctggctc 174
>42647_tae-MIR408:mirbase
Length = 187
Score = 44.1 bits (22), Expect = 4e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 169 tgcactgcctcttccctggctc 190
||||||||||||||||||||||
Sbjct: 137 tgcactgcctcttccctggctc 158
>42474_ssp-MIR408d:mirbase
Length = 180
Score = 44.1 bits (22), Expect = 4e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 169 tgcactgcctcttccctggctc 190
||||||||||||||||||||||
Sbjct: 159 tgcactgcctcttccctggctc 180
>42473_ssp-MIR408a:mirbase
Length = 248
Score = 44.1 bits (22), Expect = 4e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 169 tgcactgcctcttccctggctc 190
||||||||||||||||||||||
Sbjct: 227 tgcactgcctcttccctggctc 248
>42465_sof-MIR408d:mirbase
Length = 215
Score = 44.1 bits (22), Expect = 4e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 169 tgcactgcctcttccctggctc 190
||||||||||||||||||||||
Sbjct: 177 tgcactgcctcttccctggctc 198
>42464_sof-MIR408c:mirbase
Length = 286
Score = 44.1 bits (22), Expect = 4e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 169 tgcactgcctcttccctggctc 190
||||||||||||||||||||||
Sbjct: 248 tgcactgcctcttccctggctc 269
>42463_sof-MIR408b:mirbase
Length = 286
Score = 44.1 bits (22), Expect = 4e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 169 tgcactgcctcttccctggctc 190
||||||||||||||||||||||
Sbjct: 248 tgcactgcctcttccctggctc 269
>42462_sof-MIR408a:mirbase
Length = 283
Score = 44.1 bits (22), Expect = 4e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 169 tgcactgcctcttccctggctc 190
||||||||||||||||||||||
Sbjct: 245 tgcactgcctcttccctggctc 266
>42052_osa-MIR408:mirbase
Length = 213
Score = 44.1 bits (22), Expect = 4e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 169 tgcactgcctcttccctggctc 190
||||||||||||||||||||||
Sbjct: 154 tgcactgcctcttccctggctc 175
>39742_smo-MIR408:mirbase
Length = 109
Score = 44.1 bits (22), Expect = 4e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 168 atgcactgcctcttccctggct 189
||||||||||||||||||||||
Sbjct: 76 atgcactgcctcttccctggct 97
>42600_sbi-MIR408:mirbase
Length = 205
Score = 42.1 bits (21), Expect = 2e-04
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 169 tgcactgcctcttccctggct 189
|||||||||||||||||||||
Sbjct: 185 tgcactgcctcttccctggct 205
>40391_rco-MIR408:mirbase
Length = 92
Score = 42.1 bits (21), Expect = 2e-04
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 169 tgcactgcctcttccctggct 189
|||||||||||||||||||||
Sbjct: 68 tgcactgcctcttccctggct 88
