miRNEST 2.0, an integrative microRNA resource :: BLAST
>41882_hvu-MIR159a:mirbase
Length = 178
Score = 353 bits (178), Expect = 3e-98
Identities = 178/178 (100%)
Strand = Plus / Plus
Query: 18 ggtggagctcctatcattccaatgaagggtctaccggaagggtttgtgcagctgcttgtt 77
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 ggtggagctcctatcattccaatgaagggtctaccggaagggtttgtgcagctgcttgtt 60
Query: 78 catggttcccactatcctatctccattagaacacgaggagataggcttgtggtttgcatg 137
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 catggttcccactatcctatctccattagaacacgaggagataggcttgtggtttgcatg 120
Query: 138 atcgaggagccgcttcgatccctcgctgaccgctgtttggattgaagggagctctgca 195
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 121 atcgaggagccgcttcgatccctcgctgaccgctgtttggattgaagggagctctgca 178
>42634_tae-MIR159a:mirbase
Length = 177
Score = 297 bits (150), Expect = 2e-81
Identities = 172/178 (96%), Gaps = 1/178 (0%)
Strand = Plus / Plus
Query: 19 gtggagctcctatcattccaatgaagggtctaccggaagggtttgtgcagctgcttgttc 78
||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||
Sbjct: 1 gtggagctcctatcattccaatgaagggtctaccggaagggtttgtgcagctgctcgttc 60
Query: 79 atggttcccactatcctatctccattagaacacgaggagataggcttgtggtttgcatga 138
|||||||||||||||||||||||| ||||| ||||||||| |||| ||||||||||||||
Sbjct: 61 atggttcccactatcctatctcca-tagaaaacgaggagagaggcctgtggtttgcatga 119
Query: 139 tcgaggagccgcttcgatccctcgctgaccgctgtttggattgaagggagctctgcat 196
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 120 ccgaggagccgcttcgatccctcgctgaccgctgtttggattgaagggagctctgcat 177
>41868_far-MIR159:mirbase
Length = 200
Score = 165 bits (83), Expect = 2e-41
Identities = 168/195 (86%), Gaps = 1/195 (0%)
Strand = Plus / Plus
Query: 7 tttggtttggaggtggagctcctatcattccaatgaagggtctaccg-gaagggtttgtg 65
|||||||| |||||||||||||||||||||||||||| ||||| | | |||| | ||
Sbjct: 2 tttggttttgaggtggagctcctatcattccaatgaaaggtcttgctaggaggggtggta 61
Query: 66 cagctgcttgttcatggttcccactatcctatctccattagaacacgaggagataggctt 125
|||||||| |||||||||||||||||||||| |||| || ||| | |||||||||| |
Sbjct: 62 cagctgctcgttcatggttcccactatcctacctccgtttgaaaccagggagataggcct 121
Query: 126 gtggtttgcatgatcgaggagccgcttcgatccctcgctgaccgctgtttggattgaagg 185
|||| | |||||| ||||||||||| ||| ||||||||| ||||| |||||||||||||
Sbjct: 122 gtggctagcatgaccgaggagccgcatcgtcccctcgctggccgctctttggattgaagg 181
Query: 186 gagctctgcatcttg 200
|||||||||||||||
Sbjct: 182 gagctctgcatcttg 196
>41918_osa-MIR159b:mirbase
Length = 188
Score = 119 bits (60), Expect = 9e-28
Identities = 156/185 (84%), Gaps = 6/185 (3%)
Strand = Plus / Plus
Query: 19 gtggagctcctatcattccaatgaagggtctaccggaagggtttgtgcagctgcttgttc 78
||||||||||| || |||||||||| ||| || | ||||||| | |||||||||||||
Sbjct: 10 gtggagctcctttcgttccaatgaaaggtttatctgaagggtga-tacagctgcttgttc 68
Query: 79 atggttcccactatcctatctccattagaacacgaggagataggcttgtggtttgcatga 138
|||||||||||||| ||||||| || ||| | ||||||||||||||||||||||||
Sbjct: 69 atggttcccactattctatctc-ataggaaaa----gagataggcttgtggtttgcatga 123
Query: 139 tcgaggagccgcttcgatccctcgctgaccgctgtttggattgaagggagctctgcatct 198
| |||||||| || | ||| ||||||| || ||||||||||||||||||||||||||
Sbjct: 124 ccaaggagccgaatcaactccttgctgaccactctttggattgaagggagctctgcatct 183
Query: 199 tgatc 203
|||||
Sbjct: 184 tgatc 188
>42690_zma-MIR159a:mirbase
Length = 246
Score = 97.6 bits (49), Expect = 3e-21
Identities = 79/89 (88%)
Strand = Plus / Plus
Query: 115 gagataggcttgtggtttgcatgatcgaggagccgcttcgatccctcgctgaccgctgtt 174
|||||||||||||||||||||||| |||||||| || || |||| |||| ||||| ||
Sbjct: 149 gagataggcttgtggtttgcatgaccgaggagctgcaccgcccccttgctggccgctctt 208
Query: 175 tggattgaagggagctctgcatcttgatc 203
||||||||||||||||||||||| |||||
Sbjct: 209 tggattgaagggagctctgcatcctgatc 237
Score = 87.7 bits (44), Expect = 3e-18
Identities = 71/80 (88%)
Strand = Plus / Plus
Query: 21 ggagctcctatcattccaatgaagggtctaccggaagggtttgtgcagctgcttgttcat 80
|||||||||||||||||||||||||||| | |||||| | || | |||||| ||||||
Sbjct: 22 ggagctcctatcattccaatgaagggtcgttccgaagggctggttccgctgctcgttcat 81
Query: 81 ggttcccactatcctatctc 100
||||||||||||||||||||
Sbjct: 82 ggttcccactatcctatctc 101
>42468_ssp-MIR159a:mirbase
Length = 261
Score = 97.6 bits (49), Expect = 3e-21
Identities = 79/89 (88%)
Strand = Plus / Plus
Query: 115 gagataggcttgtggtttgcatgatcgaggagccgcttcgatccctcgctgaccgctgtt 174
|||||||||||||||||||||||| |||||||| || || |||| |||| ||||| ||
Sbjct: 165 gagataggcttgtggtttgcatgaccgaggagctgcaccgtccccttgctggccgctctt 224
Query: 175 tggattgaagggagctctgcatcttgatc 203
||||||||||||||||||||||| |||||
Sbjct: 225 tggattgaagggagctctgcatcctgatc 253
Score = 79.8 bits (40), Expect = 8e-16
Identities = 71/80 (88%), Gaps = 1/80 (1%)
Strand = Plus / Plus
Query: 21 ggagctcctatcattccaatgaagggtctaccggaagggtttgtgcagctgcttgttcat 80
|||||||||||||||||||||||||| | | |||||||| || | |||||| ||||||
Sbjct: 19 ggagctcctatcattccaatgaagggccgttctgaagggtt-gttccgctgctcgttcat 77
Query: 81 ggttcccactatcctatctc 100
||||||||||||||||||||
Sbjct: 78 ggttcccactatcctatctc 97
>42452_sof-MIR159a:mirbase
Length = 265
Score = 97.6 bits (49), Expect = 3e-21
Identities = 79/89 (88%)
Strand = Plus / Plus
Query: 115 gagataggcttgtggtttgcatgatcgaggagccgcttcgatccctcgctgaccgctgtt 174
|||||||||||||||||||||||| |||||||| || || |||| |||| ||||| ||
Sbjct: 168 gagataggcttgtggtttgcatgaccgaggagctgcaccgtccccttgctggccgctctt 227
Query: 175 tggattgaagggagctctgcatcttgatc 203
||||||||||||||||||||||| |||||
Sbjct: 228 tggattgaagggagctctgcatcctgatc 256
Score = 79.8 bits (40), Expect = 8e-16
Identities = 71/80 (88%), Gaps = 1/80 (1%)
Strand = Plus / Plus
Query: 21 ggagctcctatcattccaatgaagggtctaccggaagggtttgtgcagctgcttgttcat 80
|||||||||||||||||||||||||| | | |||||||| || | |||||| ||||||
Sbjct: 22 ggagctcctatcattccaatgaagggccgttctgaagggtt-gttccgctgctcgttcat 80
Query: 81 ggttcccactatcctatctc 100
||||||||||||||||||||
Sbjct: 81 ggttcccactatcctatctc 100
>41883_hvu-MIR159b:mirbase
Length = 122
Score = 97.6 bits (49), Expect = 3e-21
Identities = 49/49 (100%)
Strand = Plus / Plus
Query: 163 ctgaccgctgtttggattgaagggagctctgcatcttgatctattacta 211
|||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 ctgaccgctgtttggattgaagggagctctgcatcttgatctattacta 49
>42453_sof-MIR159b:mirbase
Length = 266
Score = 93.7 bits (47), Expect = 5e-20
Identities = 74/83 (89%)
Strand = Plus / Plus
Query: 115 gagataggcttgtggtttgcatgatcgaggagccgcttcgatccctcgctgaccgctgtt 174
|||||||||||||||||||||||| |||||||| || || |||| |||| ||||| ||
Sbjct: 169 gagataggcttgtggtttgcatgaccgaggagctgcaccgtccccttgctggccgctctt 228
Query: 175 tggattgaagggagctctgcatc 197
|||||||||||||||||||||||
Sbjct: 229 tggattgaagggagctctgcatc 251
Score = 71.9 bits (36), Expect = 2e-13
Identities = 70/80 (87%), Gaps = 1/80 (1%)
Strand = Plus / Plus
Query: 21 ggagctcctatcattccaatgaagggtctaccggaagggtttgtgcagctgcttgttcat 80
|||||||||||||||||||||||||| | | ||||||| || | |||||| ||||||
Sbjct: 22 ggagctcctatcattccaatgaagggccgttctgaagggtg-gttccgctgctcgttcat 80
Query: 81 ggttcccactatcctatctc 100
||||||||||||||||||||
Sbjct: 81 ggttcccactatcctatctc 100
>42700_zma-MIR159k:mirbase
Length = 200
Score = 89.7 bits (45), Expect = 8e-19
Identities = 73/81 (90%), Gaps = 1/81 (1%)
Strand = Plus / Plus
Query: 115 gagataggcttgtggtttgcatgatcgaggagccgcttcgatccct-cgctgaccgctgt 173
||||| |||||||||||||||||| |||||||| || ||| |||| || ||||||||||
Sbjct: 120 gagatgggcttgtggtttgcatgaccgaggagctgcatcgtccccttcgttgaccgctgt 179
Query: 174 ttggattgaagggagctctgc 194
|||||||||||||||||||||
Sbjct: 180 ttggattgaagggagctctgc 200
Score = 40.1 bits (20), Expect = 7e-04
Identities = 29/32 (90%)
Strand = Plus / Plus
Query: 69 ctgcttgttcatggttcccactatcctatctc 100
||||| |||||||||||||||| ||| |||||
Sbjct: 48 ctgctcgttcatggttcccactgtcccatctc 79
>42699_zma-MIR159j:mirbase
Length = 252
Score = 89.7 bits (45), Expect = 8e-19
Identities = 73/81 (90%), Gaps = 1/81 (1%)
Strand = Plus / Plus
Query: 115 gagataggcttgtggtttgcatgatcgaggagccgcttcgatccct-cgctgaccgctgt 173
||||| |||||||||||||||||| |||||||| || ||| |||| || ||||||||||
Sbjct: 172 gagatgggcttgtggtttgcatgaccgaggagctgcctcgtccccttcgttgaccgctgt 231
Query: 174 ttggattgaagggagctctgc 194
|||||||||||||||||||||
Sbjct: 232 ttggattgaagggagctctgc 252
Score = 46.1 bits (23), Expect = 1e-05
Identities = 32/35 (91%)
Strand = Plus / Plus
Query: 66 cagctgcttgttcatggttcccactatcctatctc 100
|||||||| |||||||||||||||| ||| |||||
Sbjct: 97 cagctgctcgttcatggttcccactgtcccatctc 131
>42494_sbi-MIR159:mirbase
Length = 226
Score = 89.7 bits (45), Expect = 8e-19
Identities = 72/81 (88%)
Strand = Plus / Plus
Query: 115 gagataggcttgtggtttgcatgatcgaggagccgcttcgatccctcgctgaccgctgtt 174
|||||||||||||||||||||||| |||||||| || || |||| |||| ||||| ||
Sbjct: 146 gagataggcttgtggtttgcatgaccgaggagctgcaccgtccccttgctggccgctctt 205
Query: 175 tggattgaagggagctctgca 195
|||||||||||||||||||||
Sbjct: 206 tggattgaagggagctctgca 226
Score = 58.0 bits (29), Expect = 3e-09
Identities = 32/33 (96%)
Strand = Plus / Plus
Query: 68 gctgcttgttcatggttcccactatcctatctc 100
|||||| ||||||||||||||||||||||||||
Sbjct: 50 gctgctcgttcatggttcccactatcctatctc 82
Score = 48.1 bits (24), Expect = 3e-06
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 23 agctcctatcattccaatgaaggg 46
||||||||||||||||||||||||
Sbjct: 6 agctcctatcattccaatgaaggg 29
>42695_zma-MIR159f:mirbase
Length = 215
Score = 87.7 bits (44), Expect = 3e-18
Identities = 71/80 (88%)
Strand = Plus / Plus
Query: 115 gagataggcttgtggtttgcatgatcgaggagccgcttcgatccctcgctgaccgctgtt 174
|||||||||||||||||||||||| |||||||| || ||| ||| |||| ||||| ||
Sbjct: 136 gagataggcttgtggtttgcatgaccgaggagctgcaccgaccccgtgctggccgctctt 195
Query: 175 tggattgaagggagctctgc 194
||||||||||||||||||||
Sbjct: 196 tggattgaagggagctctgc 215
Score = 71.9 bits (36), Expect = 2e-13
Identities = 70/80 (87%), Gaps = 1/80 (1%)
Strand = Plus / Plus
Query: 21 ggagctcctatcattccaatgaagggtctaccggaagggtttgtgcagctgcttgttcat 80
||||||||| |||||||||||||||||| | ||||||| || | |||||| ||||||
Sbjct: 1 ggagctcctctcattccaatgaagggtccttccgaagggtg-gttccgctgctcgttcat 59
Query: 81 ggttcccactatcctatctc 100
||||||||||||||||||||
Sbjct: 60 ggttcccactatcctatctc 79
>42691_zma-MIR159b:mirbase
Length = 221
Score = 85.7 bits (43), Expect = 1e-17
Identities = 78/87 (89%), Gaps = 2/87 (2%)
Strand = Plus / Plus
Query: 115 gagataggcttgtggtttgcatgatcgaggagccgcttcgatccct-cgctgaccgctgt 173
||||| |||||||||||||||||| |||||||| || || |||| || ||||||||||
Sbjct: 124 gagatgggcttgtggtttgcatgaccgaggagctgca-cgtccccttcgttgaccgctgt 182
Query: 174 ttggattgaagggagctctgcatcttg 200
|||||||||||||||||||||||||||
Sbjct: 183 ttggattgaagggagctctgcatcttg 209
>42698_zma-MIR159i:mirbase
Length = 252
Score = 81.8 bits (41), Expect = 2e-16
Identities = 72/81 (88%), Gaps = 1/81 (1%)
Strand = Plus / Plus
Query: 115 gagataggcttgtggtttgcatgatcgaggagccgcttcgatccct-cgctgaccgctgt 173
||||| |||||||||||||||||| |||||||| || ||| |||| || ||||||||||
Sbjct: 172 gagatgggcttgtggtttgcatgaccgaggagctgcctcgtccccttcgttgaccgctgt 231
Query: 174 ttggattgaagggagctctgc 194
||||| |||||||||||||||
Sbjct: 232 ttggagtgaagggagctctgc 252
Score = 46.1 bits (23), Expect = 1e-05
Identities = 32/35 (91%)
Strand = Plus / Plus
Query: 66 cagctgcttgttcatggttcccactatcctatctc 100
|||||||| |||||||||||||||| ||| |||||
Sbjct: 97 cagctgctcgttcatggttcccactgtcccatctc 131
>42697_zma-MIR159h:mirbase
Length = 200
Score = 81.8 bits (41), Expect = 2e-16
Identities = 72/81 (88%), Gaps = 1/81 (1%)
Strand = Plus / Plus
Query: 115 gagataggcttgtggtttgcatgatcgaggagccgcttcgatccct-cgctgaccgctgt 173
||||| |||||||||||||||||| |||||||| || ||| |||| || ||||||||||
Sbjct: 120 gagatgggcttgtggtttgcatgaccgaggagctgcctcgtccccttcgttgaccgctgt 179
Query: 174 ttggattgaagggagctctgc 194
||||| |||||||||||||||
Sbjct: 180 ttggagtgaagggagctctgc 200
Score = 46.1 bits (23), Expect = 1e-05
Identities = 32/35 (91%)
Strand = Plus / Plus
Query: 66 cagctgcttgttcatggttcccactatcctatctc 100
|||||||| |||||||||||||||| ||| |||||
Sbjct: 45 cagctgctcgttcatggttcccactgtcccatctc 79
>42455_sof-MIR159d:mirbase
Length = 265
Score = 81.8 bits (41), Expect = 2e-16
Identities = 77/89 (86%)
Strand = Plus / Plus
Query: 115 gagataggcttgtggtttgcatgatcgaggagccgcttcgatccctcgctgaccgctgtt 174
|||||| ||||||||||||||||| ||| |||| || || |||| |||| ||||| ||
Sbjct: 168 gagatacgcttgtggtttgcatgaccgatgagctgcaccgtccccttgctggccgctctt 227
Query: 175 tggattgaagggagctctgcatcttgatc 203
||||||||||||||||||||||| |||||
Sbjct: 228 tggattgaagggagctctgcatcctgatc 256
Score = 79.8 bits (40), Expect = 8e-16
Identities = 71/80 (88%), Gaps = 1/80 (1%)
Strand = Plus / Plus
Query: 21 ggagctcctatcattccaatgaagggtctaccggaagggtttgtgcagctgcttgttcat 80
|||||||||||||||||||||||||| | | |||||||| || | |||||| ||||||
Sbjct: 22 ggagctcctatcattccaatgaagggccgttctgaagggtt-gttccgctgctcgttcat 80
Query: 81 ggttcccactatcctatctc 100
||||||||||||||||||||
Sbjct: 81 ggttcccactatcctatctc 100
>42696_zma-MIR159g:mirbase
Length = 252
Score = 73.8 bits (37), Expect = 5e-14
Identities = 71/81 (87%), Gaps = 1/81 (1%)
Strand = Plus / Plus
Query: 115 gagataggcttgtggtttgcatgatcgaggagccgcttcgatccc-tcgctgaccgctgt 173
||||| |||||||||||||||||| |||||||| || ||| ||| ||| ||||||||||
Sbjct: 172 gagatgggcttgtggtttgcatgaccgaggagctgcctcgtccccttcgttgaccgctgt 231
Query: 174 ttggattgaagggagctctgc 194
||||| ||||||||| |||||
Sbjct: 232 ttggagtgaagggagttctgc 252
Score = 46.1 bits (23), Expect = 1e-05
Identities = 32/35 (91%)
Strand = Plus / Plus
Query: 66 cagctgcttgttcatggttcccactatcctatctc 100
|||||||| |||||||||||||||| ||| |||||
Sbjct: 97 cagctgctcgttcatggttcccactgtcccatctc 131
>42456_sof-MIR159e:mirbase
Length = 264
Score = 71.9 bits (36), Expect = 2e-13
Identities = 70/80 (87%), Gaps = 1/80 (1%)
Strand = Plus / Plus
Query: 21 ggagctcctatcattccaatgaagggtctaccggaagggtttgtgcagctgcttgttcat 80
|||||||||||||||||||||||||| | | ||||||| || | |||||| ||||||
Sbjct: 21 ggagctcctatcattccaatgaagggccgttctgaagggtg-gttccgctgctcgttcat 79
Query: 81 ggttcccactatcctatctc 100
||||||||||||||||||||
Sbjct: 80 ggttcccactatcctatctc 99
Score = 67.9 bits (34), Expect = 3e-12
Identities = 67/78 (85%)
Strand = Plus / Plus
Query: 115 gagataggcttgtggtttgcatgatcgaggagccgcttcgatccctcgctgaccgctgtt 174
|||||||||||||||||||||||| ||| |||| || || |||| |||| ||||| ||
Sbjct: 167 gagataggcttgtggtttgcatgaccgaagagctgcaccgtccccttgctggccgctctt 226
Query: 175 tggattgaagggagctct 192
||||||||| ||||||||
Sbjct: 227 tggattgaaaggagctct 244
>41917_osa-MIR159a:mirbase
Length = 272
Score = 54.0 bits (27), Expect = 4e-08
Identities = 27/27 (100%)
Strand = Plus / Plus
Query: 173 tttggattgaagggagctctgcatctt 199
|||||||||||||||||||||||||||
Sbjct: 242 tttggattgaagggagctctgcatctt 268
>41916_osa-MIR159a:mirbase
Length = 272
Score = 54.0 bits (27), Expect = 4e-08
Identities = 27/27 (100%)
Strand = Plus / Plus
Query: 173 tttggattgaagggagctctgcatctt 199
|||||||||||||||||||||||||||
Sbjct: 242 tttggattgaagggagctctgcatctt 268
>42635_tae-MIR159b:mirbase
Length = 255
Score = 52.0 bits (26), Expect = 2e-07
Identities = 26/26 (100%)
Strand = Plus / Plus
Query: 173 tttggattgaagggagctctgcatct 198
||||||||||||||||||||||||||
Sbjct: 230 tttggattgaagggagctctgcatct 255
>40657_mtr-MIR159a:mirbase
Length = 183
Score = 48.1 bits (24), Expect = 3e-06
Identities = 27/28 (96%)
Strand = Plus / Plus
Query: 173 tttggattgaagggagctctgcatcttg 200
|||||||||||||||||||| |||||||
Sbjct: 152 tttggattgaagggagctctacatcttg 179
>40338_rco-MIR159:mirbase
Length = 180
Score = 48.1 bits (24), Expect = 3e-06
Identities = 27/28 (96%)
Strand = Plus / Plus
Query: 171 tgtttggattgaagggagctctgcatct 198
|||||||||||||||||||||| |||||
Sbjct: 153 tgtttggattgaagggagctctacatct 180
>39804_aly-MIR159a:mirbase
Length = 222
Score = 46.1 bits (23), Expect = 1e-05
Identities = 26/27 (96%)
Strand = Plus / Plus
Query: 173 tttggattgaagggagctctgcatctt 199
|||||||||||||||||||| ||||||
Sbjct: 183 tttggattgaagggagctctacatctt 209
>41572_vvi-MIR159c:mirbase
Length = 190
Score = 44.1 bits (22), Expect = 4e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 171 tgtttggattgaagggagctct 192
||||||||||||||||||||||
Sbjct: 158 tgtttggattgaagggagctct 179
>40017_ath-MIR159b:mirbase
Length = 196
Score = 44.1 bits (22), Expect = 4e-05
Identities = 25/26 (96%)
Strand = Plus / Plus
Query: 173 tttggattgaagggagctctgcatct 198
|||||||||||||||||||| |||||
Sbjct: 168 tttggattgaagggagctcttcatct 193
>39805_aly-MIR159b:mirbase
Length = 202
Score = 44.1 bits (22), Expect = 4e-05
Identities = 25/26 (96%)
Strand = Plus / Plus
Query: 173 tttggattgaagggagctctgcatct 198
|||||||||||||||||||| |||||
Sbjct: 169 tttggattgaagggagctcttcatct 194
