miRNEST 2.0, an integrative microRNA resource :: BLAST
BLASTN 2.2.20 [Feb-08-2009]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
>46679_miR1439:micropc
Length = 97
Score = 121 bits (61), Expect = 1e-28
Identities = 88/97 (90%)
Strand = Plus / Minus
Query: 12 tactccctccgtcccaaaataagtgtcttaaacttaatacaattttgttctagagcaagt 71
|||||||||||| ||||||||||||||| || |||| ||||||||| | ||||||| |||
Sbjct: 97 tactccctccgttccaaaataagtgtctcaagcttagtacaattttatactagagctagt 38
Query: 72 gcaaagttgagacagttattttgagacggaggaagta 108
||||||||||||||||||||||||||||||| ||||
Sbjct: 37 acaaagttgagacagttattttgagacggagggagta 1
Score = 40.1 bits (20), Expect = 4e-04
Identities = 26/28 (92%)
Strand = Plus / Plus
Query: 12 tactccctccgtcccaaaataagtgtct 39
||||||||||||| |||||||| |||||
Sbjct: 1 tactccctccgtctcaaaataactgtct 28
>45970_miR1439:micropc
Length = 99
Score = 91.7 bits (46), Expect = 1e-19
Identities = 85/98 (86%)
Strand = Plus / Plus
Query: 12 tactccctccgtcccaaaataagtgtcttaaacttaatacaattttgttctagagcaagt 71
|||||||||||||||||||||||| |||||| |||| || || ||||| |||| | |||
Sbjct: 2 tactccctccgtcccaaaataagtctcttaagcttagtataactttgtactagctctagt 61
Query: 72 gcaaagttgagacagttattttgagacggaggaagtat 109
||||||||| |||||||||||| |||||||| |||||
Sbjct: 62 acaaagttgatacagttattttgggacggagggagtat 99
Score = 46.1 bits (23), Expect = 6e-06
Identities = 23/23 (100%)
Strand = Plus / Minus
Query: 11 atactccctccgtcccaaaataa 33
|||||||||||||||||||||||
Sbjct: 99 atactccctccgtcccaaaataa 77
>45205_miR1439:micropc
Length = 99
Score = 91.7 bits (46), Expect = 1e-19
Identities = 85/98 (86%)
Strand = Plus / Plus
Query: 12 tactccctccgtcccaaaataagtgtcttaaacttaatacaattttgttctagagcaagt 71
|||||||||||||||||||||||| |||||| |||| || || ||||| |||| | |||
Sbjct: 2 tactccctccgtcccaaaataagtctcttaagcttagtataactttgtactagctctagt 61
Query: 72 gcaaagttgagacagttattttgagacggaggaagtat 109
||||||||| |||||||||||| |||||||| |||||
Sbjct: 62 acaaagttgatacagttattttgggacggagggagtat 99
Score = 46.1 bits (23), Expect = 6e-06
Identities = 23/23 (100%)
Strand = Plus / Minus
Query: 11 atactccctccgtcccaaaataa 33
|||||||||||||||||||||||
Sbjct: 99 atactccctccgtcccaaaataa 77
>46048_miR1439:micropc
Length = 58
Score = 52.0 bits (26), Expect = 9e-08
Identities = 26/26 (100%)
Strand = Plus / Minus
Query: 11 atactccctccgtcccaaaataagtg 36
||||||||||||||||||||||||||
Sbjct: 57 atactccctccgtcccaaaataagtg 32
>45320_miR1439:micropc
Length = 74
Score = 50.1 bits (25), Expect = 4e-07
Identities = 25/25 (100%)
Strand = Plus / Minus
Query: 11 atactccctccgtcccaaaataagt 35
|||||||||||||||||||||||||
Sbjct: 73 atactccctccgtcccaaaataagt 49
>45276_miR1439:micropc
Length = 74
Score = 50.1 bits (25), Expect = 4e-07
Identities = 25/25 (100%)
Strand = Plus / Minus
Query: 11 atactccctccgtcccaaaataagt 35
|||||||||||||||||||||||||
Sbjct: 73 atactccctccgtcccaaaataagt 49
>45016_miR1439:micropc
Length = 74
Score = 50.1 bits (25), Expect = 4e-07
Identities = 25/25 (100%)
Strand = Plus / Minus
Query: 11 atactccctccgtcccaaaataagt 35
|||||||||||||||||||||||||
Sbjct: 73 atactccctccgtcccaaaataagt 49
>45189_miR1439:micropc
Length = 78
Score = 46.1 bits (23), Expect = 6e-06
Identities = 32/35 (91%)
Strand = Plus / Plus
Query: 75 aagttgagacagttattttgagacggaggaagtat 109
|||||||||||||||||||| ||||||| |||||
Sbjct: 43 aagttgagacagttattttggaacggagggagtat 77
Score = 42.1 bits (21), Expect = 9e-05
Identities = 27/29 (93%)
Strand = Plus / Minus
Query: 11 atactccctccgtcccaaaataagtgtct 39
||||||||||||| ||||||||| |||||
Sbjct: 77 atactccctccgttccaaaataactgtct 49
>46836_miR1439:micropc
Length = 86
Score = 44.1 bits (22), Expect = 2e-05
Identities = 22/22 (100%)
Strand = Plus / Minus
Query: 11 atactccctccgtcccaaaata 32
||||||||||||||||||||||
Sbjct: 86 atactccctccgtcccaaaata 65
