miRNEST 2.0, an integrative microRNA resource :: BLAST
BLASTN 2.2.20 [Feb-08-2009]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
>RF00906;MIR1122;AY943294.1/62260-62364 112509:Hordeum vulgare
subsp. vulgare (domesticated barley)
Length = 105
Score = 121 bits (61), Expect = 2e-27
Identities = 88/97 (90%)
Strand = Plus / Plus
Query: 12 tactccctccgtcccaaaataagtgtcttaaacttaatacaattttgttctagagcaagt 71
|||||||||||| |||||||||||||||||| |||||||||||||||| ||| | | | |
Sbjct: 5 tactccctccgttccaaaataagtgtcttaagcttaatacaattttgtactaaatctaat 64
Query: 72 gcaaagttgagacagttattttgagacggaggaagta 108
|||||||||||||||||||||| |||||||||||||
Sbjct: 65 acaaagttgagacagttattttgggacggaggaagta 101
>RF00906;MIR1122;AJ234485.1/114-218 4513:Hordeum vulgare
Length = 105
Score = 121 bits (61), Expect = 2e-27
Identities = 88/97 (90%)
Strand = Plus / Plus
Query: 12 tactccctccgtcccaaaataagtgtcttaaacttaatacaattttgttctagagcaagt 71
||||||||||||| ||||||||||||||||| |||| ||||||||||| ||||||| |||
Sbjct: 5 tactccctccgtctcaaaataagtgtcttaatcttagtacaattttgtactagagctagt 64
Query: 72 gcaaagttgagacagttattttgagacggaggaagta 108
||| |||||||||||||||||||||| |||| ||||
Sbjct: 65 acaatgttgagacagttattttgagacagagggagta 101
>RF00906;MIR1122;AY133251.1/901-1005 112509:Hordeum vulgare subsp.
vulgare (domesticated barley)
Length = 105
Score = 115 bits (58), Expect = 1e-25
Identities = 88/98 (89%)
Strand = Plus / Plus
Query: 11 atactccctccgtcccaaaataagtgtcttaaacttaatacaattttgttctagagcaag 70
||||||||||||| |||||||||||||||| | | || ||||||||||| ||||||| ||
Sbjct: 4 atactccctccgttccaaaataagtgtcttgagcgtagtacaattttgtactagagctag 63
Query: 71 tgcaaagttgagacagttattttgagacggaggaagta 108
| |||||||||||||||||||||| |||||||| ||||
Sbjct: 64 tacaaagttgagacagttattttgggacggagggagta 101
Score = 48.1 bits (24), Expect = 3e-05
Identities = 27/28 (96%)
Strand = Plus / Minus
Query: 12 tactccctccgtcccaaaataagtgtct 39
|||||||||||||||||||||| |||||
Sbjct: 101 tactccctccgtcccaaaataactgtct 74
>RF00906;MIR1122;AJ249141.1/1014-910 4513:Hordeum vulgare
Length = 105
Score = 113 bits (57), Expect = 5e-25
Identities = 87/97 (89%)
Strand = Plus / Plus
Query: 15 tccctccgtcccaaaataagtgtcttaaacttaatacaattttgttctagagcaagtgca 74
|||||| |||| |||||||||||||||| |||| ||||| ||||| ||||||| | | ||
Sbjct: 8 tccctcggtcctaaaataagtgtcttaagcttagtacaactttgtactagagctaataca 67
Query: 75 aagttgagacagttattttgagacggaggaagtataa 111
||||||||||||||||||||||||||||| |||||||
Sbjct: 68 aagttgagacagttattttgagacggagggagtataa 104
>RF00906;MIR1122;EU282755.1/953-849 112509:Hordeum vulgare subsp.
vulgare (domesticated barley)
Length = 105
Score = 101 bits (51), Expect = 2e-21
Identities = 87/99 (87%)
Strand = Plus / Plus
Query: 12 tactccctccgtcccaaaataagtgtcttaaacttaatacaattttgttctagagcaagt 71
|||||||||||||||||||||||||||| || |||| | |||||||| ||| ||| |||
Sbjct: 5 tactccctccgtcccaaaataagtgtctcaagcttagtgtaattttgtactacagctagt 64
Query: 72 gcaaagttgagacagttattttgagacggaggaagtata 110
||||||||||||| |||||||| |||||||| ||||||
Sbjct: 65 acaaagttgagacacttattttgggacggagggagtata 103
Score = 58.0 bits (29), Expect = 3e-08
Identities = 29/29 (100%)
Strand = Plus / Minus
Query: 11 atactccctccgtcccaaaataagtgtct 39
|||||||||||||||||||||||||||||
Sbjct: 102 atactccctccgtcccaaaataagtgtct 74
>RF00906;MIR1122;AK249560.1/988-1092 112509:Hordeum vulgare subsp.
vulgare (domesticated barley)
Length = 105
Score = 99.6 bits (50), Expect = 8e-21
Identities = 80/90 (88%)
Strand = Plus / Minus
Query: 12 tactccctccgtcccaaaataagtgtcttaaacttaatacaattttgttctagagcaagt 71
|||||||||||||||||||||| ||||| ||||||||||||| ||||| ||| ||| |||
Sbjct: 101 tactccctccgtcccaaaataactgtctcaaacttaatacaagtttgtactatagctagt 42
Query: 72 gcaaagttgagacagttattttgagacgga 101
|||||||||||| |||||||| ||||||
Sbjct: 41 ataaagttgagacacttattttgggacgga 12
Score = 50.1 bits (25), Expect = 7e-06
Identities = 28/29 (96%)
Strand = Plus / Plus
Query: 11 atactccctccgtcccaaaataagtgtct 39
||||||| |||||||||||||||||||||
Sbjct: 4 atactccatccgtcccaaaataagtgtct 32
Score = 46.1 bits (23), Expect = 1e-04
Identities = 29/31 (93%)
Strand = Plus / Plus
Query: 78 ttgagacagttattttgagacggaggaagta 108
||||||||||||||||| |||||||| ||||
Sbjct: 71 ttgagacagttattttgggacggagggagta 101
>RF00906;MIR1122;EU282771.1/632-528 112509:Hordeum vulgare subsp.
vulgare (domesticated barley)
Length = 105
Score = 97.6 bits (49), Expect = 3e-20
Identities = 85/97 (87%)
Strand = Plus / Plus
Query: 12 tactccctccgtcccaaaataagtgtcttaaacttaatacaattttgttctagagcaagt 71
|||||||||||||||||||||| | ||| ||||||| ||||| ||| | ||||||| |||
Sbjct: 5 tactccctccgtcccaaaataactttctcaaacttagtacaactttatactagagctagt 64
Query: 72 gcaaagttgagacagttattttgagacggaggaagta 108
| |||||||||| | ||||||||||||||||| ||||
Sbjct: 65 gtaaagttgagatacttattttgagacggagggagta 101
>RF00906;MIR1122;AJ400714.1/3663-3767 4565:Triticum aestivum (bread
wheat)
Length = 105
Score = 93.7 bits (47), Expect = 5e-19
Identities = 80/91 (87%)
Strand = Plus / Minus
Query: 11 atactccctccgtcccaaaataagtgtcttaaacttaatacaattttgttctagagcaag 70
||||||||||||||||||||||||||||| || |||| ||||| ||||| |||||| ||
Sbjct: 102 atactccctccgtcccaaaataagtgtctcaaccttagtacaactttgtactagagttag 43
Query: 71 tgcaaagttgagacagttattttgagacgga 101
|| ||| |||||||| |||||||| ||||||
Sbjct: 42 tgtaaaattgagacacttattttgggacgga 12
Score = 48.1 bits (24), Expect = 3e-05
Identities = 27/28 (96%)
Strand = Plus / Plus
Query: 12 tactccctccgtcccaaaataagtgtct 39
|||||| |||||||||||||||||||||
Sbjct: 5 tactccttccgtcccaaaataagtgtct 32
>RF00906;MIR1122;FJ184990.1/3303-3406 4565:Triticum aestivum (bread
wheat)
Length = 104
Score = 93.7 bits (47), Expect = 5e-19
Identities = 87/99 (87%), Gaps = 1/99 (1%)
Strand = Plus / Plus
Query: 11 atactccctccgtcccaaaataagtgtcttaaacttaatacaattttgttctagagcaag 70
||||||||||||||||||||||||||||| || |||| ||||||||| | |||||| ||
Sbjct: 4 atactccctccgtcccaaaataagtgtctcaaccttagtacaattttatactagagttag 63
Query: 71 tgcaaagttgagacagttattttgagacggaggaagtat 109
| ||||| ||||||| |||||||| |||||||| |||||
Sbjct: 64 tacaaag-tgagacacttattttgggacggagggagtat 101
Score = 58.0 bits (29), Expect = 3e-08
Identities = 29/29 (100%)
Strand = Plus / Minus
Query: 11 atactccctccgtcccaaaataagtgtct 39
|||||||||||||||||||||||||||||
Sbjct: 101 atactccctccgtcccaaaataagtgtct 73
>RF00906;MIR1122;DQ871219.1/106890-106994 85692:Triticum turgidum
subsp. dicoccoides
Length = 105
Score = 91.7 bits (46), Expect = 2e-18
Identities = 85/98 (86%)
Strand = Plus / Plus
Query: 11 atactccctccgtcccaaaataagtgtcttaaacttaatacaattttgttctagagcaag 70
|||||||||||||||||||||||||||||| | |||| || || ||||| |||||| ||
Sbjct: 4 atactccctccgtcccaaaataagtgtcttgagcttagtaaaaatttgtactagagatag 63
Query: 71 tgcaaagttgagacagttattttgagacggaggaagta 108
| ||||||||||||| |||||||| || ||||| ||||
Sbjct: 64 tacaaagttgagacacttattttgggatggagggagta 101
Score = 48.1 bits (24), Expect = 3e-05
Identities = 27/28 (96%)
Strand = Plus / Minus
Query: 12 tactccctccgtcccaaaataagtgtct 39
|||||||||| |||||||||||||||||
Sbjct: 101 tactccctccatcccaaaataagtgtct 74
>RF00906;MIR1122;AK252392.1/1279-1175 112509:Hordeum vulgare subsp.
vulgare (domesticated barley)
Length = 105
Score = 91.7 bits (46), Expect = 2e-18
Identities = 85/98 (86%)
Strand = Plus / Plus
Query: 11 atactccctccgtcccaaaataagtgtcttaaacttaatacaattttgttctagagcaag 70
|||| ||||||||||||||||||||||||||| |||| ||||||||| | | |||| ||
Sbjct: 4 ataccccctccgtcccaaaataagtgtcttaagcttagtacaattttatacatgagctag 63
Query: 71 tgcaaagttgagacagttattttgagacggaggaagta 108
| ||||||| |||||| ||||||| |||||||| ||||
Sbjct: 64 tacaaagttaagacagatattttgggacggagggagta 101
Score = 46.1 bits (23), Expect = 1e-04
Identities = 29/31 (93%)
Strand = Plus / Minus
Query: 12 tactccctccgtcccaaaataagtgtcttaa 42
||||||||||||||||||||| ||||||||
Sbjct: 101 tactccctccgtcccaaaatatctgtcttaa 71
>RF00906;MIR1122;EU593539.1/914-1018 4513:Hordeum vulgare
Length = 105
Score = 91.7 bits (46), Expect = 2e-18
Identities = 85/98 (86%)
Strand = Plus / Plus
Query: 12 tactccctccgtcccaaaataagtgtcttaaacttaatacaattttgttctagagcaagt 71
|||||||||||||||||||||| |||||||| |||| || || ||| | ||||| | |||
Sbjct: 5 tactccctccgtcccaaaataactgtcttaagcttagtataaatttatactagatctagt 64
Query: 72 gcaaagttgagacagttattttgagacggaggaagtat 109
||||||||||||||||||||| |||||||| |||||
Sbjct: 65 ataaagttgagacagttattttgggacggagggagtat 102
Score = 50.1 bits (25), Expect = 7e-06
Identities = 28/29 (96%)
Strand = Plus / Minus
Query: 11 atactccctccgtcccaaaataagtgtct 39
||||||||||||||||||||||| |||||
Sbjct: 102 atactccctccgtcccaaaataactgtct 74
>RF00906;MIR1122;EU282239.1/1196-1300 52152:Elymus repens
Length = 105
Score = 91.7 bits (46), Expect = 2e-18
Identities = 85/98 (86%)
Strand = Plus / Plus
Query: 11 atactccctccgtcccaaaataagtgtcttaaacttaatacaattttgttctagagcaag 70
||||||||||||||||||||||||||||| || |||| ||||| ||||| ||| || |
Sbjct: 4 atactccctccgtcccaaaataagtgtctcaagcttagtacaactttgtactaaagttaa 63
Query: 71 tgcaaagttgagacagttattttgagacggaggaagta 108
| ||||||||||||| |||||||| |||||||| ||||
Sbjct: 64 tacaaagttgagacatttattttgggacggagggagta 101
Score = 48.1 bits (24), Expect = 3e-05
Identities = 27/28 (96%)
Strand = Plus / Minus
Query: 12 tactccctccgtcccaaaataagtgtct 39
|||||||||||||||||||||| |||||
Sbjct: 101 tactccctccgtcccaaaataaatgtct 74
>RF00906;MIR1122;EU282768.1/632-528 112509:Hordeum vulgare subsp.
vulgare (domesticated barley)
Length = 105
Score = 89.7 bits (45), Expect = 8e-18
Identities = 84/97 (86%)
Strand = Plus / Plus
Query: 12 tactccctccgtcccaaaataagtgtcttaaacttaatacaattttgttctagagcaagt 71
|||||||||||||||||||||| | ||| ||||||| ||||| ||| | ||||||| |||
Sbjct: 5 tactccctccgtcccaaaataactttctcaaacttagtacaactttatactagagctagt 64
Query: 72 gcaaagttgagacagttattttgagacggaggaagta 108
| |||| ||||| | ||||||||||||||||| ||||
Sbjct: 65 gtaaagctgagatacttattttgagacggagggagta 101
>RF00906;MIR1122;DQ445238.1/5626-5730 112509:Hordeum vulgare subsp.
vulgare (domesticated barley)
Length = 105
Score = 83.8 bits (42), Expect = 5e-16
Identities = 84/98 (85%)
Strand = Plus / Plus
Query: 12 tactccctccgtcccaaaataagtgtcttaaacttaatacaattttgttctagagcaagt 71
|||||||||||||||||||||| |||||||| |||| || || ||| | |||| | |||
Sbjct: 5 tactccctccgtcccaaaataactgtcttaagcttagtataaatttatattagatctagt 64
Query: 72 gcaaagttgagacagttattttgagacggaggaagtat 109
||||||||||||||||||||| |||||||| |||||
Sbjct: 65 ataaagttgagacagttattttgggacggagggagtat 102
Score = 50.1 bits (25), Expect = 7e-06
Identities = 28/29 (96%)
Strand = Plus / Minus
Query: 11 atactccctccgtcccaaaataagtgtct 39
||||||||||||||||||||||| |||||
Sbjct: 102 atactccctccgtcccaaaataactgtct 74
>RF00906;MIR1122;DQ995510.1/1615-1718 4513:Hordeum vulgare
Length = 104
Score = 83.8 bits (42), Expect = 5e-16
Identities = 85/98 (86%), Gaps = 1/98 (1%)
Strand = Plus / Plus
Query: 11 atactccctccgtcccaaaataagtgtcttaaacttaatacaattttgttctagagcaag 70
|||||||||||||| |||||||| ||||| || ||| ||||| ||||| ||||||| ||
Sbjct: 4 atactccctccgtctcaaaataactgtctcaa-ctttgtacaactttgtactagagctag 62
Query: 71 tgcaaagttgagacagttattttgagacggaggaagta 108
| |||||||||||||||||||||| || ||||| ||||
Sbjct: 63 tacaaagttgagacagttattttgggatggagggagta 100
Score = 65.9 bits (33), Expect = 1e-10
Identities = 36/37 (97%)
Strand = Plus / Minus
Query: 73 caaagttgagacagttattttgagacggaggaagtat 109
||||||||||||||||||||||||||||||| |||||
Sbjct: 40 caaagttgagacagttattttgagacggagggagtat 4
>RF00906;MIR1122;EU282250.1/1190-1294 52152:Elymus repens
Length = 105
Score = 83.8 bits (42), Expect = 5e-16
Identities = 84/98 (85%)
Strand = Plus / Plus
Query: 11 atactccctccgtcccaaaataagtgtcttaaacttaatacaattttgttctagagcaag 70
||||||||||||||||||||||||||||| || |||| ||||| |||| ||| || |
Sbjct: 4 atactccctccgtcccaaaataagtgtctcaagcttagtacaaccttgtactaaagttaa 63
Query: 71 tgcaaagttgagacagttattttgagacggaggaagta 108
| ||||||||||||| |||||||| |||||||| ||||
Sbjct: 64 tacaaagttgagacatttattttgggacggagggagta 101
Score = 48.1 bits (24), Expect = 3e-05
Identities = 27/28 (96%)
Strand = Plus / Minus
Query: 12 tactccctccgtcccaaaataagtgtct 39
|||||||||||||||||||||| |||||
Sbjct: 101 tactccctccgtcccaaaataaatgtct 74
>RF00906;MIR1122;DQ445236.1/13423-13319 112509:Hordeum vulgare
subsp. vulgare (domesticated barley)
Length = 105
Score = 81.8 bits (41), Expect = 2e-15
Identities = 86/101 (85%)
Strand = Plus / Minus
Query: 11 atactccctccgtcccaaaataagtgtcttaaacttaatacaattttgttctagagcaag 70
||||||||||||| ||||||||| | ||| || |||| ||||| ||||| ||||||| ||
Sbjct: 102 atactccctccgttccaaaataactatctcaagcttagtacaactttgtactagagctag 43
Query: 71 tgcaaagttgagacagttattttgagacggaggaagtataa 111
| |||| |||||||| |||||||| ||||||| |||||||
Sbjct: 42 tacaaatttgagacacttattttggaacggagggagtataa 2
Score = 50.1 bits (25), Expect = 7e-06
Identities = 28/29 (96%)
Strand = Plus / Plus
Query: 11 atactccctccgtcccaaaataagtgtct 39
||||||||||||| |||||||||||||||
Sbjct: 4 atactccctccgttccaaaataagtgtct 32
>RF00906;MIR1122;FJ236275.1/674-570 4573:Aegilops speltoides
Length = 105
Score = 73.8 bits (37), Expect = 5e-13
Identities = 82/97 (84%)
Strand = Plus / Plus
Query: 12 tactccctccgtcccaaaataagtgtcttaaacttaatacaattttgttctagagcaagt 71
||||||||||||| |||||||||||||| || | || ||||| ||||| ||| || |||
Sbjct: 5 tactccctccgtctcaaaataagtgtctcaagcctagtacaactttgtactaaagttagt 64
Query: 72 gcaaagttgagacagttattttgagacggaggaagta 108
||||||| ||||| |||||||| |||||||| ||||
Sbjct: 65 acaaagttaagacacttattttgggacggagggagta 101
Score = 61.9 bits (31), Expect = 2e-09
Identities = 31/31 (100%)
Strand = Plus / Minus
Query: 12 tactccctccgtcccaaaataagtgtcttaa 42
|||||||||||||||||||||||||||||||
Sbjct: 101 tactccctccgtcccaaaataagtgtcttaa 71
Score = 46.1 bits (23), Expect = 1e-04
Identities = 29/31 (93%)
Strand = Plus / Minus
Query: 78 ttgagacagttattttgagacggaggaagta 108
|||||||| ||||||||||||||||| ||||
Sbjct: 35 ttgagacacttattttgagacggagggagta 5
>RF00906;MIR1122;AF474373.1/50497-50394 112509:Hordeum vulgare
subsp. vulgare (domesticated barley)
Length = 104
Score = 71.9 bits (36), Expect = 2e-12
Identities = 72/84 (85%)
Strand = Plus / Plus
Query: 11 atactccctccgtcccaaaataagtgtcttaaacttaatacaattttgttctagagcaag 70
|||||| |||||||||||||||| ||||| || | || ||||| ||||| ||||| | ||
Sbjct: 4 atactcactccgtcccaaaataactgtctcaagcctagtacaactttgtactagaactag 63
Query: 71 tgcaaagttgagacagttattttg 94
| ||||||||||||| ||||||||
Sbjct: 64 tacaaagttgagacacttattttg 87
>RF00906;MIR1122;X83518.1/7301-7197 4513:Hordeum vulgare
Length = 105
Score = 71.9 bits (36), Expect = 2e-12
Identities = 72/84 (85%)
Strand = Plus / Plus
Query: 11 atactccctccgtcccaaaataagtgtcttaaacttaatacaattttgttctagagcaag 70
||||||||||| || |||||||| ||||| || |||| ||||| ||||| |||||| ||
Sbjct: 4 atactccctccatctcaaaataactgtctcaagcttagtacaactttgtagtagagctag 63
Query: 71 tgcaaagttgagacagttattttg 94
| ||||||||||||| ||||||||
Sbjct: 64 tacaaagttgagacacttattttg 87
Score = 50.1 bits (25), Expect = 7e-06
Identities = 31/33 (93%)
Strand = Plus / Minus
Query: 78 ttgagacagttattttgagacggaggaagtata 110
|||||||||||||||||||| ||||| ||||||
Sbjct: 35 ttgagacagttattttgagatggagggagtata 3
>RF00906;MIR1122;AK249748.1/2677-2573 112509:Hordeum vulgare subsp.
vulgare (domesticated barley)
Length = 105
Score = 69.9 bits (35), Expect = 7e-12
Identities = 71/83 (85%)
Strand = Plus / Minus
Query: 12 tactccctccgtcccaaaataagtgtcttaaacttaatacaattttgttctagagcaagt 71
||||||||||||| |||||||| ||||||||||||| || || ||| | || ||| |||
Sbjct: 101 tactccctccgtcgcaaaataaatgtcttaaacttagtataaatttatagtaaagctagt 42
Query: 72 gcaaagttgagacagttattttg 94
||||||| ||||||||||||||
Sbjct: 41 acaaagttaagacagttattttg 19
>RF00906;MIR1122;EU282770.1/593-711 112509:Hordeum vulgare subsp.
vulgare (domesticated barley)
Length = 119
Score = 69.9 bits (35), Expect = 7e-12
Identities = 74/87 (85%)
Strand = Plus / Minus
Query: 22 gtcccaaaataagtgtcttaaacttaatacaattttgttctagagcaagtgcaaagttga 81
|||||||||||| | ||| ||||||| ||||| ||| | ||||||| || | ||||||||
Sbjct: 91 gtcccaaaataactttctcaaacttagtacaactttatactagagctagggtaaagttga 32
Query: 82 gacagttattttgagacggaggaagta 108
|||| |||||||||||||||| ||||
Sbjct: 31 gacacctattttgagacggagggagta 5
Score = 46.1 bits (23), Expect = 1e-04
Identities = 26/27 (96%)
Strand = Plus / Minus
Query: 12 tactccctccgtcccaaaataagtgtc 38
|||||||||||||||||||||| ||||
Sbjct: 115 tactccctccgtcccaaaataactgtc 89
>RF00906;MIR1122;AY268139.1/69673-69778 4513:Hordeum vulgare
Length = 106
Score = 67.9 bits (34), Expect = 3e-11
Identities = 37/38 (97%)
Strand = Plus / Plus
Query: 74 aaagttgagacagttattttgagacggaggaagtataa 111
|||||| |||||||||||||||||||||||||||||||
Sbjct: 68 aaagttaagacagttattttgagacggaggaagtataa 105
>RF00906;MIR1122;AF521177.1/206122-206018 4513:Hordeum vulgare
Length = 105
Score = 67.9 bits (34), Expect = 3e-11
Identities = 82/98 (83%)
Strand = Plus / Plus
Query: 11 atactccctccgtcccaaaataagtgtcttaaacttaatacaattttgttctagagcaag 70
||||||||||| | |||||||| ||| | | |||| ||||| ||||| ||||||| ||
Sbjct: 4 atactccctccatttcaaaataattgtttcatgcttagtacaactttgtactagagctag 63
Query: 71 tgcaaagttgagacagttattttgagacggaggaagta 108
| ||||||||||||| ||||||||| ||||||| ||||
Sbjct: 64 tacaaagttgagacatttattttgaaacggagggagta 101
>RF00906;MIR1122;DQ175992.1/50-154 112509:Hordeum vulgare subsp.
vulgare (domesticated barley)
Length = 105
Score = 67.9 bits (34), Expect = 3e-11
Identities = 70/82 (85%)
Strand = Plus / Plus
Query: 27 aaaataagtgtcttaaacttaatacaattttgttctagagcaagtgcaaagttgagacag 86
|||||||||||||||| |||| || |||||| | ||||||| || ||||||| |||||
Sbjct: 20 aaaataagtgtcttaagcttagtataattttatactagagctagaacaaagttaagacaa 79
Query: 87 ttattttgagacggaggaagta 108
|||||||| |||||||| ||||
Sbjct: 80 ttattttgggacggagggagta 101
Score = 54.0 bits (27), Expect = 4e-07
Identities = 30/31 (96%)
Strand = Plus / Minus
Query: 12 tactccctccgtcccaaaataagtgtcttaa 42
|||||||||||||||||||||| ||||||||
Sbjct: 101 tactccctccgtcccaaaataattgtcttaa 71
>RF00906;MIR1122;AY821694.1/1308-1197 37674:Crithopsis delileana
Length = 112
Score = 58.0 bits (29), Expect = 3e-08
Identities = 29/29 (100%)
Strand = Plus / Plus
Query: 12 tactccctccgtcccaaaataagtgtctt 40
|||||||||||||||||||||||||||||
Sbjct: 5 tactccctccgtcccaaaataagtgtctt 33
Score = 52.0 bits (26), Expect = 2e-06
Identities = 29/30 (96%)
Strand = Plus / Minus
Query: 10 catactccctccgtcccaaaataagtgtct 39
|||||||||||| |||||||||||||||||
Sbjct: 110 catactccctccatcccaaaataagtgtct 81
>RF00906;MIR1122;DQ901436.1/1229-1333 4565:Triticum aestivum (bread
wheat)
Length = 105
Score = 56.0 bits (28), Expect = 1e-07
Identities = 76/92 (82%)
Strand = Plus / Minus
Query: 12 tactccctccgtcccaaaataagtgtcttaaacttaatacaattttgttctagagcaagt 71
||||| |||| || |||||||||||||| || || ||||| ||||| || ||| |||
Sbjct: 101 tactcactccatctcaaaataagtgtctcaactctagtacaactttgtattaaagctagt 42
Query: 72 gcaaagttgagacagttattttgagacggagg 103
||||||||||||| |||||||| ||||||||
Sbjct: 41 acaaagttgagacacttattttgggacggagg 10
Score = 52.0 bits (26), Expect = 2e-06
Identities = 26/26 (100%)
Strand = Plus / Plus
Query: 14 ctccctccgtcccaaaataagtgtct 39
||||||||||||||||||||||||||
Sbjct: 7 ctccctccgtcccaaaataagtgtct 32
>RF00906;MIR1122;AB183299.1/312-404 4565:Triticum aestivum (bread
wheat)
Length = 93
Score = 56.0 bits (28), Expect = 1e-07
Identities = 34/36 (94%)
Strand = Plus / Plus
Query: 75 aagttgagacagttattttgagacggaggaagtata 110
||||||||||| |||||||| |||||||||||||||
Sbjct: 56 aagttgagacacttattttgggacggaggaagtata 91
Score = 52.0 bits (26), Expect = 2e-06
Identities = 26/26 (100%)
Strand = Plus / Plus
Query: 14 ctccctccgtcccaaaataagtgtct 39
||||||||||||||||||||||||||
Sbjct: 7 ctccctccgtcccaaaataagtgtct 32
Score = 50.1 bits (25), Expect = 7e-06
Identities = 28/29 (96%)
Strand = Plus / Minus
Query: 11 atactccctccgtcccaaaataagtgtct 39
||||| |||||||||||||||||||||||
Sbjct: 90 atacttcctccgtcccaaaataagtgtct 62
Score = 44.1 bits (22), Expect = 4e-04
Identities = 28/30 (93%)
Strand = Plus / Minus
Query: 74 aaagttgagacagttattttgagacggagg 103
|||||||||||| |||||||| ||||||||
Sbjct: 39 aaagttgagacacttattttgggacggagg 10
>RF00906;MIR1122;AF488415.1/78603-78755 4568:Triticum monococcum
Length = 153
Score = 56.0 bits (28), Expect = 1e-07
Identities = 58/68 (85%)
Strand = Plus / Plus
Query: 44 cttaatacaattttgttctagagcaagtgcaaagttgagacagttattttgagacggagg 103
|||| ||||| ||||| ||| || ||| |||| ||||||||||||||||| ||||||||
Sbjct: 85 cttagtacaactttgtactaaagttagtacaaacttgagacagttattttgggacggagg 144
Query: 104 aagtataa 111
|||||||
Sbjct: 145 gagtataa 152
Score = 50.1 bits (25), Expect = 7e-06
Identities = 40/45 (88%)
Strand = Plus / Plus
Query: 14 ctccctccgtcccaaaataagtgtcttaaacttaatacaattttg 58
|||||| ||||||||||||||||||| || |||| ||||| ||||
Sbjct: 7 ctcccttcgtcccaaaataagtgtctcaaccttagtacaactttg 51
Score = 50.1 bits (25), Expect = 7e-06
Identities = 28/29 (96%)
Strand = Plus / Minus
Query: 11 atactccctccgtcccaaaataagtgtct 39
||||||||||||||||||||||| |||||
Sbjct: 150 atactccctccgtcccaaaataactgtct 122
>RF00906;MIR1122;AK250735.1/291-376 112509:Hordeum vulgare subsp.
vulgare (domesticated barley)
Length = 86
Score = 56.0 bits (28), Expect = 1e-07
Identities = 28/28 (100%)
Strand = Plus / Plus
Query: 12 tactccctccgtcccaaaataagtgtct 39
||||||||||||||||||||||||||||
Sbjct: 5 tactccctccgtcccaaaataagtgtct 32
>RF00906;MIR1122;EU282251.1/1314-1209 52152:Elymus repens
Length = 106
Score = 56.0 bits (28), Expect = 1e-07
Identities = 28/28 (100%)
Strand = Plus / Minus
Query: 11 atactccctccgtcccaaaataagtgtc 38
||||||||||||||||||||||||||||
Sbjct: 103 atactccctccgtcccaaaataagtgtc 76
Score = 54.0 bits (27), Expect = 4e-07
Identities = 27/27 (100%)
Strand = Plus / Plus
Query: 12 tactccctccgtcccaaaataagtgtc 38
|||||||||||||||||||||||||||
Sbjct: 5 tactccctccgtcccaaaataagtgtc 31
>RF00906;MIR1122;AP008214.1/14410723-14410632 39947:Oryza sativa
Japonica Group
Length = 92
Score = 56.0 bits (28), Expect = 1e-07
Identities = 28/28 (100%)
Strand = Plus / Plus
Query: 9 acatactccctccgtcccaaaataagtg 36
||||||||||||||||||||||||||||
Sbjct: 2 acatactccctccgtcccaaaataagtg 29
>RF00906;MIR1122;AY663392.1/117099-117203 4565:Triticum aestivum
(bread wheat)
Length = 105
Score = 54.0 bits (27), Expect = 4e-07
Identities = 33/35 (94%)
Strand = Plus / Minus
Query: 8 cacatactccctccgtcccaaaataagtgtcttaa 42
|||||||||||||| ||||||||||||||| ||||
Sbjct: 105 cacatactccctccatcccaaaataagtgtgttaa 71
>RF00906;MIR1122;FJ374625.1/3001-2870 4573:Aegilops speltoides
Length = 132
Score = 54.0 bits (27), Expect = 4e-07
Identities = 27/27 (100%)
Strand = Plus / Plus
Query: 10 catactccctccgtcccaaaataagtg 36
|||||||||||||||||||||||||||
Sbjct: 3 catactccctccgtcccaaaataagtg 29
>RF01058;MIR806;AP008208.1/6823788-6823544 39947:Oryza sativa
Japonica Group
Length = 245
Score = 52.0 bits (26), Expect = 2e-06
Identities = 26/26 (100%)
Strand = Plus / Minus
Query: 11 atactccctccgtcccaaaataagtg 36
||||||||||||||||||||||||||
Sbjct: 245 atactccctccgtcccaaaataagtg 220
>RF01058;MIR806;AL731615.4/103346-103100 39947:Oryza sativa
Japonica Group
Length = 247
Score = 52.0 bits (26), Expect = 2e-06
Identities = 26/26 (100%)
Strand = Plus / Plus
Query: 12 tactccctccgtcccaaaataagtgt 37
||||||||||||||||||||||||||
Sbjct: 2 tactccctccgtcccaaaataagtgt 27
>RF01058;MIR806;AACV01025022.1/35011-35254 39947:Oryza sativa
Japonica Group
Length = 244
Score = 52.0 bits (26), Expect = 2e-06
Identities = 26/26 (100%)
Strand = Plus / Plus
Query: 11 atactccctccgtcccaaaataagtg 36
||||||||||||||||||||||||||
Sbjct: 1 atactccctccgtcccaaaataagtg 26
>RF01058;MIR806;AAAA02004537.1/25464-25706 39946:Oryza sativa
Indica Group
Length = 243
Score = 52.0 bits (26), Expect = 2e-06
Identities = 26/26 (100%)
Strand = Plus / Plus
Query: 11 atactccctccgtcccaaaataagtg 36
||||||||||||||||||||||||||
Sbjct: 1 atactccctccgtcccaaaataagtg 26
>RF01058;MIR806;AAAA02009876.1/3121-2881 39946:Oryza sativa Indica
Group
Length = 241
Score = 52.0 bits (26), Expect = 2e-06
Identities = 26/26 (100%)
Strand = Plus / Minus
Query: 11 atactccctccgtcccaaaataagtg 36
||||||||||||||||||||||||||
Sbjct: 241 atactccctccgtcccaaaataagtg 216
>RF00906;MIR1122;U29095.1/333-439 4565:Triticum aestivum (bread
wheat)
Length = 107
Score = 52.0 bits (26), Expect = 2e-06
Identities = 26/26 (100%)
Strand = Plus / Plus
Query: 11 atactccctccgtcccaaaataagtg 36
||||||||||||||||||||||||||
Sbjct: 4 atactccctccgtcccaaaataagtg 29
Score = 44.1 bits (22), Expect = 4e-04
Identities = 25/26 (96%)
Strand = Plus / Minus
Query: 11 atactccctccgtcccaaaataagtg 36
|||||||||||||||| |||||||||
Sbjct: 104 atactccctccgtcccgaaataagtg 79
>RF00906;MIR1122;DQ267106.1/62901-62968 4572:Triticum urartu
Length = 68
Score = 52.0 bits (26), Expect = 2e-06
Identities = 26/26 (100%)
Strand = Plus / Plus
Query: 11 atactccctccgtcccaaaataagtg 36
||||||||||||||||||||||||||
Sbjct: 4 atactccctccgtcccaaaataagtg 29
>RF00906;MIR1122;FJ491378.1/3751-3855 4550:Secale cereale (rye)
Length = 105
Score = 52.0 bits (26), Expect = 2e-06
Identities = 29/30 (96%)
Strand = Plus / Plus
Query: 9 acatactccctccgtcccaaaataagtgtc 38
||||| ||||||||||||||||||||||||
Sbjct: 2 acatattccctccgtcccaaaataagtgtc 31
Score = 46.1 bits (23), Expect = 1e-04
Identities = 26/27 (96%)
Strand = Plus / Minus
Query: 12 tactccctccgtcccaaaataagtgtc 38
||||||| |||||||||||||||||||
Sbjct: 101 tactcccgccgtcccaaaataagtgtc 75
>RF00906;MIR1122;FJ491378.1/4581-4466 4550:Secale cereale (rye)
Length = 116
Score = 52.0 bits (26), Expect = 2e-06
Identities = 26/26 (100%)
Strand = Plus / Minus
Query: 11 atactccctccgtcccaaaataagtg 36
||||||||||||||||||||||||||
Sbjct: 113 atactccctccgtcccaaaataagtg 88
Score = 44.1 bits (22), Expect = 4e-04
Identities = 25/26 (96%)
Strand = Plus / Plus
Query: 11 atactccctccgtcccaaaataagtg 36
|||||||||| |||||||||||||||
Sbjct: 4 atactccctctgtcccaaaataagtg 29
>RF00906;MIR1122;AF521177.1/81577-81474 4513:Hordeum vulgare
Length = 104
Score = 52.0 bits (26), Expect = 2e-06
Identities = 26/26 (100%)
Strand = Plus / Minus
Query: 11 atactccctccgtcccaaaataagtg 36
||||||||||||||||||||||||||
Sbjct: 101 atactccctccgtcccaaaataagtg 76
>RF00906;MIR1122;AP003303.4/77673-77577 39947:Oryza sativa
Japonica Group
Length = 97
Score = 52.0 bits (26), Expect = 2e-06
Identities = 26/26 (100%)
Strand = Plus / Plus
Query: 9 acatactccctccgtcccaaaataag 34
||||||||||||||||||||||||||
Sbjct: 2 acatactccctccgtcccaaaataag 27
Score = 46.1 bits (23), Expect = 1e-04
Identities = 23/23 (100%)
Strand = Plus / Minus
Query: 12 tactccctccgtcccaaaataag 34
|||||||||||||||||||||||
Sbjct: 93 tactccctccgtcccaaaataag 71
>RF01058;MIR806;AACV01004692.1/2655-2900 39947:Oryza sativa
Japonica Group
Length = 246
Score = 50.1 bits (25), Expect = 7e-06
Identities = 25/25 (100%)
Strand = Plus / Plus
Query: 12 tactccctccgtcccaaaataagtg 36
|||||||||||||||||||||||||
Sbjct: 2 tactccctccgtcccaaaataagtg 26
>RF01058;MIR806;AAAA02014927.1/5775-5532 39946:Oryza sativa Indica
Group
Length = 244
Score = 50.1 bits (25), Expect = 7e-06
Identities = 25/25 (100%)
Strand = Plus / Plus
Query: 12 tactccctccgtcccaaaataagtg 36
|||||||||||||||||||||||||
Sbjct: 2 tactccctccgtcccaaaataagtg 26
>RF01058;MIR806;AACV01000175.1/175-418 39947:Oryza sativa Japonica
Group
Length = 244
Score = 50.1 bits (25), Expect = 7e-06
Identities = 25/25 (100%)
Strand = Plus / Plus
Query: 12 tactccctccgtcccaaaataagtg 36
|||||||||||||||||||||||||
Sbjct: 2 tactccctccgtcccaaaataagtg 26
Score = 44.1 bits (22), Expect = 4e-04
Identities = 25/26 (96%)
Strand = Plus / Minus
Query: 11 atactccctccgtcccaaaataagtg 36
||||| ||||||||||||||||||||
Sbjct: 244 atactacctccgtcccaaaataagtg 219
>RF01058;MIR806;AAAA02015465.1/824-1069 39946:Oryza sativa Indica
Group
Length = 246
Score = 50.1 bits (25), Expect = 7e-06
Identities = 25/25 (100%)
Strand = Plus / Minus
Query: 12 tactccctccgtcccaaaataagtg 36
|||||||||||||||||||||||||
Sbjct: 245 tactccctccgtcccaaaataagtg 221
Score = 44.1 bits (22), Expect = 4e-04
Identities = 25/26 (96%)
Strand = Plus / Plus
Query: 11 atactccctccgtcccaaaataagtg 36
||||| ||||||||||||||||||||
Sbjct: 1 atactacctccgtcccaaaataagtg 26
>RF01058;MIR806;AP004279.1/119207-118967 39947:Oryza sativa Japonica
Group
Length = 241
Score = 50.1 bits (25), Expect = 7e-06
Identities = 25/25 (100%)
Strand = Plus / Minus
Query: 12 tactccctccgtcccaaaataagtg 36
|||||||||||||||||||||||||
Sbjct: 240 tactccctccgtcccaaaataagtg 216
Score = 44.1 bits (22), Expect = 4e-04
Identities = 25/26 (96%)
Strand = Plus / Plus
Query: 11 atactccctccgtcccaaaataagtg 36
||||| ||||||||||||||||||||
Sbjct: 1 atacttcctccgtcccaaaataagtg 26
>RF01058;MIR806;AP008214.1/5532426-5532666 39947:Oryza sativa
Japonica Group
Length = 241
Score = 50.1 bits (25), Expect = 7e-06
Identities = 25/25 (100%)
Strand = Plus / Minus
Query: 12 tactccctccgtcccaaaataagtg 36
|||||||||||||||||||||||||
Sbjct: 240 tactccctccgtcccaaaataagtg 216
Score = 44.1 bits (22), Expect = 4e-04
Identities = 25/26 (96%)
Strand = Plus / Plus
Query: 11 atactccctccgtcccaaaataagtg 36
||||| ||||||||||||||||||||
Sbjct: 1 atactacctccgtcccaaaataagtg 26
>RF01058;MIR806;AP004672.3/126730-126486 39947:Oryza sativa
Japonica Group
Length = 245
Score = 50.1 bits (25), Expect = 7e-06
Identities = 25/25 (100%)
Strand = Plus / Plus
Query: 12 tactccctccgtcccaaaataagtg 36
|||||||||||||||||||||||||
Sbjct: 2 tactccctccgtcccaaaataagtg 26
>RF01058;MIR806;AAAA02012959.1/2038-1794 39946:Oryza sativa Indica
Group
Length = 245
Score = 50.1 bits (25), Expect = 7e-06
Identities = 25/25 (100%)
Strand = Plus / Plus
Query: 12 tactccctccgtcccaaaataagtg 36
|||||||||||||||||||||||||
Sbjct: 2 tactccctccgtcccaaaataagtg 26
>RF01058;MIR806;AACV01005022.1/1990-2230 39947:Oryza sativa Japonica
Group
Length = 241
Score = 50.1 bits (25), Expect = 7e-06
Identities = 25/25 (100%)
Strand = Plus / Minus
Query: 12 tactccctccgtcccaaaataagtg 36
|||||||||||||||||||||||||
Sbjct: 240 tactccctccgtcccaaaataagtg 216
>RF01058;MIR806;AAAA02007955.1/54103-53859 39946:Oryza sativa
Indica Group
Length = 245
Score = 50.1 bits (25), Expect = 7e-06
Identities = 25/25 (100%)
Strand = Plus / Plus
Query: 12 tactccctccgtcccaaaataagtg 36
|||||||||||||||||||||||||
Sbjct: 2 tactccctccgtcccaaaataagtg 26
Score = 44.1 bits (22), Expect = 4e-04
Identities = 25/26 (96%)
Strand = Plus / Minus
Query: 11 atactccctccgtcccaaaataagtg 36
||||| ||||||||||||||||||||
Sbjct: 245 atactacctccgtcccaaaataagtg 220
>RF00906;MIR1122;AB182945.1/6773-6906 4565:Triticum aestivum (bread
wheat)
Length = 134
Score = 50.1 bits (25), Expect = 7e-06
Identities = 28/29 (96%)
Strand = Plus / Minus
Query: 11 atactccctccgtcccaaaataagtgtct 39
||||||||||||| |||||||||||||||
Sbjct: 131 atactccctccgttccaaaataagtgtct 103
Score = 44.1 bits (22), Expect = 4e-04
Identities = 25/26 (96%)
Strand = Plus / Plus
Query: 15 tccctccgtcccaaaataagtgtctt 40
||||||||||||||||| ||||||||
Sbjct: 8 tccctccgtcccaaaatgagtgtctt 33
>RF00906;MIR1122;AJ507395.1/7785-7899 112509:Hordeum vulgare subsp.
vulgare (domesticated barley)
Length = 115
Score = 50.1 bits (25), Expect = 7e-06
Identities = 25/25 (100%)
Strand = Plus / Minus
Query: 12 tactccctccgtcccaaaataagtg 36
|||||||||||||||||||||||||
Sbjct: 111 tactccctccgtcccaaaataagtg 87
>RF00906;MIR1122;AK252095.1/1820-1925 112509:Hordeum vulgare subsp.
vulgare (domesticated barley)
Length = 106
Score = 50.1 bits (25), Expect = 7e-06
Identities = 28/29 (96%)
Strand = Plus / Minus
Query: 10 catactccctccgtcccaaaataagtgtc 38
||||||||||| |||||||||||||||||
Sbjct: 104 catactccctctgtcccaaaataagtgtc 76
>RF00906;MIR1122;AF181455.1/3108-2994 4513:Hordeum vulgare
Length = 115
Score = 50.1 bits (25), Expect = 7e-06
Identities = 25/25 (100%)
Strand = Plus / Minus
Query: 12 tactccctccgtcccaaaataagtg 36
|||||||||||||||||||||||||
Sbjct: 111 tactccctccgtcccaaaataagtg 87
>RF00906;MIR1122;AF525764.1/1593-1489 200361:Aegilops tauschii
subsp. strangulata
Length = 105
Score = 50.1 bits (25), Expect = 7e-06
Identities = 28/29 (96%)
Strand = Plus / Minus
Query: 12 tactccctccgtcccaaaataagtgtctt 40
|||||||||| ||||||||||||||||||
Sbjct: 101 tactccctccatcccaaaataagtgtctt 73
Score = 44.1 bits (22), Expect = 4e-04
Identities = 28/30 (93%)
Strand = Plus / Plus
Query: 11 atactccctccgtcccaaaataagtgtctt 40
||||||||| ||||||||||||| ||||||
Sbjct: 4 atactccctacgtcccaaaataattgtctt 33
>RF00906;MIR1122;AAAA02028442.1/1248-1113 39946:Oryza sativa
Indica Group
Length = 136
Score = 50.1 bits (25), Expect = 7e-06
Identities = 25/25 (100%)
Strand = Plus / Plus
Query: 9 acatactccctccgtcccaaaataa 33
|||||||||||||||||||||||||
Sbjct: 2 acatactccctccgtcccaaaataa 26
Score = 44.1 bits (22), Expect = 4e-04
Identities = 22/22 (100%)
Strand = Plus / Minus
Query: 12 tactccctccgtcccaaaataa 33
||||||||||||||||||||||
Sbjct: 132 tactccctccgtcccaaaataa 111
>RF00906;MIR1122;AAAA02018379.1/19319-19440 39946:Oryza sativa
Indica Group
Length = 122
Score = 50.1 bits (25), Expect = 7e-06
Identities = 25/25 (100%)
Strand = Plus / Minus
Query: 9 acatactccctccgtcccaaaataa 33
|||||||||||||||||||||||||
Sbjct: 121 acatactccctccgtcccaaaataa 97
>RF00906;MIR1122;AACV01020861.1/25006-25108 39947:Oryza sativa
Japonica Group
Length = 103
Score = 50.1 bits (25), Expect = 7e-06
Identities = 25/25 (100%)
Strand = Plus / Plus
Query: 9 acatactccctccgtcccaaaataa 33
|||||||||||||||||||||||||
Sbjct: 2 acatactccctccgtcccaaaataa 26
Score = 44.1 bits (22), Expect = 4e-04
Identities = 22/22 (100%)
Strand = Plus / Minus
Query: 12 tactccctccgtcccaaaataa 33
||||||||||||||||||||||
Sbjct: 99 tactccctccgtcccaaaataa 78
>RF00906;MIR1122;AP005421.3/127890-127779 39947:Oryza sativa
Japonica Group
Length = 112
Score = 50.1 bits (25), Expect = 7e-06
Identities = 25/25 (100%)
Strand = Plus / Plus
Query: 8 cacatactccctccgtcccaaaata 32
|||||||||||||||||||||||||
Sbjct: 1 cacatactccctccgtcccaaaata 25
>RF00906;MIR1122;AP008215.1/18970521-18970611 39947:Oryza sativa
Japonica Group
Length = 91
Score = 50.1 bits (25), Expect = 7e-06
Identities = 25/25 (100%)
Strand = Plus / Plus
Query: 8 cacatactccctccgtcccaaaata 32
|||||||||||||||||||||||||
Sbjct: 1 cacatactccctccgtcccaaaata 25
>RF01058;MIR806;AP008208.1/24144061-24144300 39947:Oryza sativa
Japonica Group
Length = 240
Score = 48.1 bits (24), Expect = 3e-05
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 11 atactccctccgtcccaaaataag 34
||||||||||||||||||||||||
Sbjct: 1 atactccctccgtcccaaaataag 24
>RF01058;MIR806;AACV01004890.1/11000-11239 39947:Oryza sativa
Japonica Group
Length = 240
Score = 48.1 bits (24), Expect = 3e-05
Identities = 24/24 (100%)
Strand = Plus / Minus
Query: 11 atactccctccgtcccaaaataag 34
||||||||||||||||||||||||
Sbjct: 240 atactccctccgtcccaaaataag 217
>RF00906;MIR1122;ABXC01006480.1/93142-93031 4558:Sorghum bicolor
(sorghum)
Length = 112
Score = 48.1 bits (24), Expect = 3e-05
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 10 catactccctccgtcccaaaataa 33
||||||||||||||||||||||||
Sbjct: 3 catactccctccgtcccaaaataa 26
>RF00906;MIR1122;D30809.1/4836-4921 4565:Triticum aestivum (bread
wheat)
Length = 86
Score = 48.1 bits (24), Expect = 3e-05
Identities = 27/28 (96%)
Strand = Plus / Minus
Query: 11 atactccctccgtcccaaaataagtgtc 38
|||||||| |||||||||||||||||||
Sbjct: 83 atactcccaccgtcccaaaataagtgtc 56
>RF00906;MIR1122;CR626933.1/11895-11804 4571:Triticum turgidum
Length = 92
Score = 48.1 bits (24), Expect = 3e-05
Identities = 24/24 (100%)
Strand = Plus / Minus
Query: 17 cctccgtcccaaaataagtgtctt 40
||||||||||||||||||||||||
Sbjct: 85 cctccgtcccaaaataagtgtctt 62
>RF00906;MIR1122;DQ900687.1/24296-24401 112509:Hordeum vulgare
subsp. vulgare (domesticated barley)
Length = 106
Score = 48.1 bits (24), Expect = 3e-05
Identities = 27/28 (96%)
Strand = Plus / Minus
Query: 11 atactccctccgtcccaaaataagtgtc 38
||||||||||||||| ||||||||||||
Sbjct: 103 atactccctccgtcctaaaataagtgtc 76
>RF00906;MIR1122;AJ234583.1/157-260 4513:Hordeum vulgare
Length = 104
Score = 48.1 bits (24), Expect = 3e-05
Identities = 30/32 (93%)
Strand = Plus / Plus
Query: 11 atactccctccgtcccaaaataagtgtcttaa 42
|||||||||||||| |||||||||| ||||||
Sbjct: 4 atactccctccgtctcaaaataagtttcttaa 35
Score = 46.1 bits (23), Expect = 1e-04
Identities = 29/31 (93%)
Strand = Plus / Plus
Query: 78 ttgagacagttattttgagacggaggaagta 108
|||||||| ||||||||||||||||| ||||
Sbjct: 70 ttgagacaattattttgagacggagggagta 100
>RF00906;MIR1122;EU282656.1/645-750 112509:Hordeum vulgare subsp.
vulgare (domesticated barley)
Length = 106
Score = 48.1 bits (24), Expect = 3e-05
Identities = 30/32 (93%)
Strand = Plus / Minus
Query: 12 tactccctccgtcccaaaataagtgtcttaaa 43
||||||||| ||||||||||||||||| ||||
Sbjct: 102 tactccctcggtcccaaaataagtgtcgtaaa 71
>RF00906;MIR1122;AP008216.1/15579713-15579809 39947:Oryza sativa
Japonica Group
Length = 97
Score = 48.1 bits (24), Expect = 3e-05
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 12 tactccctccgtcccaaaataagt 35
||||||||||||||||||||||||
Sbjct: 5 tactccctccgtcccaaaataagt 28
>RF00906;MIR1122;AACV01001981.1/7100-7193 39947:Oryza sativa
Japonica Group
Length = 94
Score = 48.1 bits (24), Expect = 3e-05
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 10 catactccctccgtcccaaaataa 33
||||||||||||||||||||||||
Sbjct: 3 catactccctccgtcccaaaataa 26
>RF01058;MIR806;AACV01020112.1/46634-46870 39947:Oryza sativa
Japonica Group
Length = 237
Score = 46.1 bits (23), Expect = 1e-04
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 12 tactccctccgtcccaaaataag 34
|||||||||||||||||||||||
Sbjct: 2 tactccctccgtcccaaaataag 24
Score = 44.1 bits (22), Expect = 4e-04
Identities = 22/22 (100%)
Strand = Plus / Minus
Query: 12 tactccctccgtcccaaaataa 33
||||||||||||||||||||||
Sbjct: 236 tactccctccgtcccaaaataa 215
>RF00906;MIR1122;CR954190.2/110040-110176 3880:Medicago truncatula
(barrel medic)
Length = 137
Score = 46.1 bits (23), Expect = 1e-04
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 9 acatactccctccgtcccaaaat 31
|||||||||||||||||||||||
Sbjct: 2 acatactccctccgtcccaaaat 24
>RF00906;MIR1122;EF560592.1/17009-17118 4567:Triticum turgidum
subsp. durum (durum wheat)
Length = 110
Score = 46.1 bits (23), Expect = 1e-04
Identities = 26/27 (96%)
Strand = Plus / Minus
Query: 12 tactccctccgtcccaaaataagtgtc 38
|||| ||||||||||||||||||||||
Sbjct: 106 tactacctccgtcccaaaataagtgtc 80
>RF00906;MIR1122;AF325197.1/3732-3639 4565:Triticum aestivum (bread
wheat)
Length = 94
Score = 46.1 bits (23), Expect = 1e-04
Identities = 35/39 (89%)
Strand = Plus / Plus
Query: 73 caaagttgagacagttattttgagacggaggaagtataa 111
|||||||||| || |||||||| |||||||||||||||
Sbjct: 55 caaagttgagtcatctattttgaaacggaggaagtataa 93
>RF00906;MIR1122;AF521177.1/27342-27466 4513:Hordeum vulgare
Length = 125
Score = 46.1 bits (23), Expect = 1e-04
Identities = 23/23 (100%)
Strand = Plus / Minus
Query: 10 catactccctccgtcccaaaata 32
|||||||||||||||||||||||
Sbjct: 123 catactccctccgtcccaaaata 101
>RF00906;MIR1122;AAAA02035140.1/47005-46870 39946:Oryza sativa
Indica Group
Length = 136
Score = 46.1 bits (23), Expect = 1e-04
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 8 cacatactccctccgtcccaaaa 30
|||||||||||||||||||||||
Sbjct: 1 cacatactccctccgtcccaaaa 23
>RF00906;MIR1122;AAAA02000966.1/612-453 39946:Oryza sativa Indica
Group
Length = 160
Score = 46.1 bits (23), Expect = 1e-04
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 11 atactccctccgtcccaaaataa 33
|||||||||||||||||||||||
Sbjct: 4 atactccctccgtcccaaaataa 26
Score = 44.1 bits (22), Expect = 4e-04
Identities = 22/22 (100%)
Strand = Plus / Minus
Query: 12 tactccctccgtcccaaaataa 33
||||||||||||||||||||||
Sbjct: 156 tactccctccgtcccaaaataa 135
>RF00906;MIR1122;AC215820.3/114332-114188 4537:Oryza punctata
Length = 145
Score = 46.1 bits (23), Expect = 1e-04
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 10 catactccctccgtcccaaaata 32
|||||||||||||||||||||||
Sbjct: 3 catactccctccgtcccaaaata 25
>RF00906;MIR1122;AC109595.2/23288-23368 39947:Oryza sativa
Japonica Group
Length = 81
Score = 46.1 bits (23), Expect = 1e-04
Identities = 23/23 (100%)
Strand = Plus / Minus
Query: 8 cacatactccctccgtcccaaaa 30
|||||||||||||||||||||||
Sbjct: 81 cacatactccctccgtcccaaaa 59
>RF00906;MIR1122;AC128646.5/47101-47248 39947:Oryza sativa
Japonica Group
Length = 148
Score = 46.1 bits (23), Expect = 1e-04
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 8 cacatactccctccgtcccaaaa 30
|||||||||||||||||||||||
Sbjct: 1 cacatactccctccgtcccaaaa 23
>RF00906;MIR1122;AAAA02019483.1/16379-16491 39946:Oryza sativa
Indica Group
Length = 113
Score = 46.1 bits (23), Expect = 1e-04
Identities = 23/23 (100%)
Strand = Plus / Minus
Query: 11 atactccctccgtcccaaaataa 33
|||||||||||||||||||||||
Sbjct: 110 atactccctccgtcccaaaataa 88
>RF00906;MIR1122;AAAA02018626.1/12551-12423 39946:Oryza sativa
Indica Group
Length = 129
Score = 46.1 bits (23), Expect = 1e-04
Identities = 23/23 (100%)
Strand = Plus / Minus
Query: 11 atactccctccgtcccaaaataa 33
|||||||||||||||||||||||
Sbjct: 126 atactccctccgtcccaaaataa 104
>RF00906;MIR1122;AP008218.1/1449043-1448953 39947:Oryza sativa
Japonica Group
Length = 91
Score = 46.1 bits (23), Expect = 1e-04
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 8 cacatactccctccgtcccaaaa 30
|||||||||||||||||||||||
Sbjct: 1 cacatactccctccgtcccaaaa 23
>RF00906;MIR1122;AC121366.4/55476-55582 39947:Oryza sativa
Japonica Group
Length = 107
Score = 46.1 bits (23), Expect = 1e-04
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 10 catactccctccgtcccaaaata 32
|||||||||||||||||||||||
Sbjct: 3 catactccctccgtcccaaaata 25
>RF01058;MIR806;AAAA02002634.1/48844-49087 39946:Oryza sativa
Indica Group
Length = 244
Score = 44.1 bits (22), Expect = 4e-04
Identities = 25/26 (96%)
Strand = Plus / Plus
Query: 11 atactccctccgtcccaaaataagtg 36
||||||| ||||||||||||||||||
Sbjct: 1 atactccatccgtcccaaaataagtg 26
>RF01058;MIR806;AC137621.2/17491-17729 39947:Oryza sativa Japonica
Group
Length = 239
Score = 44.1 bits (22), Expect = 4e-04
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 11 atactccctccgtcccaaaata 32
||||||||||||||||||||||
Sbjct: 1 atactccctccgtcccaaaata 22
>RF01058;MIR806;AP008218.1/7228032-7227791 39947:Oryza sativa
Japonica Group
Length = 242
Score = 44.1 bits (22), Expect = 4e-04
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 11 atactccctccgtcccaaaata 32
||||||||||||||||||||||
Sbjct: 1 atactccctccgtcccaaaata 22
>RF01058;MIR806;AACV01010423.1/14473-14229 39947:Oryza sativa
Japonica Group
Length = 245
Score = 44.1 bits (22), Expect = 4e-04
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 11 atactccctccgtcccaaaata 32
||||||||||||||||||||||
Sbjct: 1 atactccctccgtcccaaaata 22
>RF00906;MIR1122;AY491681.1/77211-77302 4568:Triticum monococcum
Length = 92
Score = 44.1 bits (22), Expect = 4e-04
Identities = 22/22 (100%)
Strand = Plus / Minus
Query: 11 atactccctccgtcccaaaata 32
||||||||||||||||||||||
Sbjct: 89 atactccctccgtcccaaaata 68
>RF00906;MIR1122;AY235466.1/780-656 4565:Triticum aestivum (bread
wheat)
Length = 125
Score = 44.1 bits (22), Expect = 4e-04
Identities = 22/22 (100%)
Strand = Plus / Minus
Query: 11 atactccctccgtcccaaaata 32
||||||||||||||||||||||
Sbjct: 122 atactccctccgtcccaaaata 101
>RF00906;MIR1122;AY235464.1/714-838 4565:Triticum aestivum (bread
wheat)
Length = 125
Score = 44.1 bits (22), Expect = 4e-04
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 11 atactccctccgtcccaaaata 32
||||||||||||||||||||||
Sbjct: 4 atactccctccgtcccaaaata 25
>RF00906;MIR1122;AF427791.1/222786-222921 4513:Hordeum vulgare
Length = 136
Score = 44.1 bits (22), Expect = 4e-04
Identities = 28/30 (93%)
Strand = Plus / Plus
Query: 12 tactccctccgtcccaaaataagtgtctta 41
|||||||||||||||||||| | |||||||
Sbjct: 5 tactccctccgtcccaaaattattgtctta 34
>RF00906;MIR1122;FJ477093.1/40908-41001 4513:Hordeum vulgare
Length = 94
Score = 44.1 bits (22), Expect = 4e-04
Identities = 25/26 (96%)
Strand = Plus / Plus
Query: 11 atactccctccgtcccaaaataagtg 36
|||||||||| |||||||||||||||
Sbjct: 4 atactccctctgtcccaaaataagtg 29
>RF00906;MIR1122;EF059989.1/24895-24770 29664:Brachypodium
sylvaticum
Length = 126
Score = 44.1 bits (22), Expect = 4e-04
Identities = 25/26 (96%)
Strand = Plus / Plus
Query: 11 atactccctccgtcccaaaataagtg 36
||||||||||||||||||| ||||||
Sbjct: 4 atactccctccgtcccaaattaagtg 29
>RF00906;MIR1122;EU730899.1/86003-86096 15368:Brachypodium
distachyon
Length = 94
Score = 44.1 bits (22), Expect = 4e-04
Identities = 25/26 (96%)
Strand = Plus / Minus
Query: 11 atactccctccgtcccaaaataagtg 36
|||| |||||||||||||||||||||
Sbjct: 91 ataccccctccgtcccaaaataagtg 66
>RF00906;MIR1122;AAAA02029963.1/5445-5312 39946:Oryza sativa Indica
Group
Length = 134
Score = 44.1 bits (22), Expect = 4e-04
Identities = 22/22 (100%)
Strand = Plus / Minus
Query: 11 atactccctccgtcccaaaata 32
||||||||||||||||||||||
Sbjct: 131 atactccctccgtcccaaaata 110
>RF00906;MIR1122;AAAA02034555.1/16647-16527 39946:Oryza sativa
Indica Group
Length = 121
Score = 44.1 bits (22), Expect = 4e-04
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 11 atactccctccgtcccaaaata 32
||||||||||||||||||||||
Sbjct: 37 atactccctccgtcccaaaata 58
>RF00906;MIR1122;AAAA02004035.1/49440-49310 39946:Oryza sativa
Indica Group
Length = 131
Score = 44.1 bits (22), Expect = 4e-04
Identities = 22/22 (100%)
Strand = Plus / Minus
Query: 11 atactccctccgtcccaaaata 32
||||||||||||||||||||||
Sbjct: 128 atactccctccgtcccaaaata 107
>RF00906;MIR1122;AAAA02025635.1/7223-7330 39946:Oryza sativa
Indica Group
Length = 108
Score = 44.1 bits (22), Expect = 4e-04
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 11 atactccctccgtcccaaaata 32
||||||||||||||||||||||
Sbjct: 4 atactccctccgtcccaaaata 25
>RF00906;MIR1122;ABRL01001045.1/1775-1911 65489:Oryza barthii
Length = 137
Score = 44.1 bits (22), Expect = 4e-04
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 9 acatactccctccgtcccaaaa 30
||||||||||||||||||||||
Sbjct: 2 acatactccctccgtcccaaaa 23
>RF00906;MIR1122;AAAA02022195.1/27114-27226 39946:Oryza sativa
Indica Group
Length = 113
Score = 44.1 bits (22), Expect = 4e-04
Identities = 22/22 (100%)
Strand = Plus / Minus
Query: 12 tactccctccgtcccaaaataa 33
||||||||||||||||||||||
Sbjct: 109 tactccctccgtcccaaaataa 88
>RF00906;MIR1122;AACV01004030.1/351-512 39947:Oryza sativa Japonica
Group
Length = 162
Score = 44.1 bits (22), Expect = 4e-04
Identities = 22/22 (100%)
Strand = Plus / Minus
Query: 11 atactccctccgtcccaaaata 32
||||||||||||||||||||||
Sbjct: 159 atactccctccgtcccaaaata 138
>RF00906;MIR1122;AAAA02007259.1/4313-4455 39946:Oryza sativa
Indica Group
Length = 143
Score = 44.1 bits (22), Expect = 4e-04
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 11 atactccctccgtcccaaaata 32
||||||||||||||||||||||
Sbjct: 4 atactccctccgtcccaaaata 25
>RF00906;MIR1122;AAAA02026282.1/2845-2975 39946:Oryza sativa
Indica Group
Length = 131
Score = 44.1 bits (22), Expect = 4e-04
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 11 atactccctccgtcccaaaata 32
||||||||||||||||||||||
Sbjct: 4 atactccctccgtcccaaaata 25
>RF00906;MIR1122;AAAA02003593.1/26423-26497 39946:Oryza sativa
Indica Group
Length = 75
Score = 44.1 bits (22), Expect = 4e-04
Identities = 22/22 (100%)
Strand = Plus / Minus
Query: 11 atactccctccgtcccaaaata 32
||||||||||||||||||||||
Sbjct: 72 atactccctccgtcccaaaata 51
>RF00906;MIR1122;AAAA02008343.1/9662-9526 39946:Oryza sativa
Indica Group
Length = 137
Score = 44.1 bits (22), Expect = 4e-04
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 9 acatactccctccgtcccaaaa 30
||||||||||||||||||||||
Sbjct: 2 acatactccctccgtcccaaaa 23
>RF00906;MIR1122;FJ581044.1/175385-175266 4538:Oryza glaberrima
(African rice)
Length = 120
Score = 44.1 bits (22), Expect = 4e-04
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 12 tactccctccgtcccaaaataa 33
||||||||||||||||||||||
Sbjct: 5 tactccctccgtcccaaaataa 26
>RF00906;MIR1122;AC111016.2/25572-25452 39947:Oryza sativa Japonica
Group
Length = 121
Score = 44.1 bits (22), Expect = 4e-04
Identities = 22/22 (100%)
Strand = Plus / Minus
Query: 11 atactccctccgtcccaaaata 32
||||||||||||||||||||||
Sbjct: 118 atactccctccgtcccaaaata 97
>RF00906;MIR1122;AAAA02022585.1/6052-5955 39946:Oryza sativa
Indica Group
Length = 98
Score = 44.1 bits (22), Expect = 4e-04
Identities = 22/22 (100%)
Strand = Plus / Minus
Query: 9 acatactccctccgtcccaaaa 30
||||||||||||||||||||||
Sbjct: 97 acatactccctccgtcccaaaa 76
>RF00906;MIR1122;AAAA02004642.1/60119-60040 39946:Oryza sativa
Indica Group
Length = 80
Score = 44.1 bits (22), Expect = 4e-04
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 9 acatactccctccgtcccaaaa 30
||||||||||||||||||||||
Sbjct: 2 acatactccctccgtcccaaaa 23
>RF00906;MIR1122;AP004047.3/87830-87972 39947:Oryza sativa
Japonica Group
Length = 143
Score = 44.1 bits (22), Expect = 4e-04
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 11 atactccctccgtcccaaaata 32
||||||||||||||||||||||
Sbjct: 4 atactccctccgtcccaaaata 25
>RF00906;MIR1122;AACV01024885.1/21195-21061 39947:Oryza sativa
Japonica Group
Length = 135
Score = 44.1 bits (22), Expect = 4e-04
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 11 atactccctccgtcccaaaata 32
||||||||||||||||||||||
Sbjct: 4 atactccctccgtcccaaaata 25
>RF00906;MIR1122;AC232160.1/3827-3951 63629:Oryza minuta
Length = 125
Score = 44.1 bits (22), Expect = 4e-04
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 11 atactccctccgtcccaaaata 32
||||||||||||||||||||||
Sbjct: 4 atactccctccgtcccaaaata 25
>RF00906;MIR1122;AAAA02020504.1/20392-20526 39946:Oryza sativa
Indica Group
Length = 135
Score = 44.1 bits (22), Expect = 4e-04
Identities = 22/22 (100%)
Strand = Plus / Minus
Query: 11 atactccctccgtcccaaaata 32
||||||||||||||||||||||
Sbjct: 132 atactccctccgtcccaaaata 111
>RF00906;MIR1122;AC226266.1/92361-92224 63629:Oryza minuta
Length = 138
Score = 44.1 bits (22), Expect = 4e-04
Identities = 22/22 (100%)
Strand = Plus / Minus
Query: 11 atactccctccgtcccaaaata 32
||||||||||||||||||||||
Sbjct: 135 atactccctccgtcccaaaata 114
>RF00906;MIR1122;AP008216.1/16569819-16569686 39947:Oryza sativa
Japonica Group
Length = 134
Score = 44.1 bits (22), Expect = 4e-04
Identities = 22/22 (100%)
Strand = Plus / Minus
Query: 11 atactccctccgtcccaaaata 32
||||||||||||||||||||||
Sbjct: 131 atactccctccgtcccaaaata 110
>RF00906;MIR1122;AAAA02033927.1/2539-2391 39946:Oryza sativa Indica
Group
Length = 149
Score = 44.1 bits (22), Expect = 4e-04
Identities = 22/22 (100%)
Strand = Plus / Minus
Query: 11 atactccctccgtcccaaaata 32
||||||||||||||||||||||
Sbjct: 146 atactccctccgtcccaaaata 125
>RF00906;MIR1122;AAAA02026694.1/32137-32261 39946:Oryza sativa
Indica Group
Length = 125
Score = 44.1 bits (22), Expect = 4e-04
Identities = 22/22 (100%)
Strand = Plus / Minus
Query: 11 atactccctccgtcccaaaata 32
||||||||||||||||||||||
Sbjct: 122 atactccctccgtcccaaaata 101
>RF00906;MIR1122;AP008218.1/2340117-2339983 39947:Oryza sativa
Japonica Group
Length = 135
Score = 44.1 bits (22), Expect = 4e-04
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 11 atactccctccgtcccaaaata 32
||||||||||||||||||||||
Sbjct: 4 atactccctccgtcccaaaata 25
>RF00906;MIR1122;AL831801.4/77594-77709 4530:Oryza sativa (rice)
Length = 116
Score = 44.1 bits (22), Expect = 4e-04
Identities = 22/22 (100%)
Strand = Plus / Minus
Query: 11 atactccctccgtcccaaaata 32
||||||||||||||||||||||
Sbjct: 113 atactccctccgtcccaaaata 92
>RF00906;MIR1122;AC210491.1/95749-95858 4538:Oryza glaberrima
(African rice)
Length = 110
Score = 44.1 bits (22), Expect = 4e-04
Identities = 22/22 (100%)
Strand = Plus / Minus
Query: 11 atactccctccgtcccaaaata 32
||||||||||||||||||||||
Sbjct: 107 atactccctccgtcccaaaata 86
>RF00906;MIR1122;AP008212.1/25859487-25859353 39947:Oryza sativa
Japonica Group
Length = 135
Score = 44.1 bits (22), Expect = 4e-04
Identities = 22/22 (100%)
Strand = Plus / Minus
Query: 11 atactccctccgtcccaaaata 32
||||||||||||||||||||||
Sbjct: 132 atactccctccgtcccaaaata 111
>RF00906;MIR1122;AAAA02007975.1/29302-29380 39946:Oryza sativa
Indica Group
Length = 79
Score = 44.1 bits (22), Expect = 4e-04
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 11 atactccctccgtcccaaaata 32
||||||||||||||||||||||
Sbjct: 4 atactccctccgtcccaaaata 25
>RF00906;MIR1122;AACV01003595.1/38638-38749 39947:Oryza sativa
Japonica Group
Length = 112
Score = 44.1 bits (22), Expect = 4e-04
Identities = 22/22 (100%)
Strand = Plus / Minus
Query: 11 atactccctccgtcccaaaata 32
||||||||||||||||||||||
Sbjct: 109 atactccctccgtcccaaaata 88
>RF00906;MIR1122;AAAA02017235.1/6057-5946 39946:Oryza sativa
Indica Group
Length = 112
Score = 44.1 bits (22), Expect = 4e-04
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 11 atactccctccgtcccaaaata 32
||||||||||||||||||||||
Sbjct: 4 atactccctccgtcccaaaata 25
>RF00906;MIR1122;AC137999.2/12932-12822 39947:Oryza sativa
Japonica Group
Length = 111
Score = 44.1 bits (22), Expect = 4e-04
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 11 atactccctccgtcccaaaata 32
||||||||||||||||||||||
Sbjct: 4 atactccctccgtcccaaaata 25
>RF00906;MIR1122;AP008208.1/1166338-1166449 39947:Oryza sativa
Japonica Group
Length = 112
Score = 44.1 bits (22), Expect = 4e-04
Identities = 22/22 (100%)
Strand = Plus / Minus
Query: 11 atactccctccgtcccaaaata 32
||||||||||||||||||||||
Sbjct: 109 atactccctccgtcccaaaata 88
>RF00906;MIR1122;AP003280.2/146720-146590 39947:Oryza sativa
Japonica Group
Length = 131
Score = 44.1 bits (22), Expect = 4e-04
Identities = 22/22 (100%)
Strand = Plus / Minus
Query: 11 atactccctccgtcccaaaata 32
||||||||||||||||||||||
Sbjct: 128 atactccctccgtcccaaaata 107
>RF00906;MIR1122;AACV01014374.1/13115-13004 39947:Oryza sativa
Japonica Group
Length = 112
Score = 44.1 bits (22), Expect = 4e-04
Identities = 22/22 (100%)
Strand = Plus / Minus
Query: 11 atactccctccgtcccaaaata 32
||||||||||||||||||||||
Sbjct: 109 atactccctccgtcccaaaata 88
>RF00906;MIR1122;AACV01023551.1/12075-12186 39947:Oryza sativa
Japonica Group
Length = 112
Score = 44.1 bits (22), Expect = 4e-04
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 11 atactccctccgtcccaaaata 32
||||||||||||||||||||||
Sbjct: 4 atactccctccgtcccaaaata 25
>RF00906;MIR1122;AP003760.4/5605-5476 39947:Oryza sativa Japonica
Group
Length = 130
Score = 44.1 bits (22), Expect = 4e-04
Identities = 22/22 (100%)
Strand = Plus / Minus
Query: 11 atactccctccgtcccaaaata 32
||||||||||||||||||||||
Sbjct: 127 atactccctccgtcccaaaata 106
>RF00906;MIR1122;AK288546.1/1340-1246 39947:Oryza sativa Japonica
Group
Length = 95
Score = 44.1 bits (22), Expect = 4e-04
Identities = 22/22 (100%)
Strand = Plus / Minus
Query: 11 atactccctccgtcccaaaata 32
||||||||||||||||||||||
Sbjct: 92 atactccctccgtcccaaaata 71
>RF00906;MIR1122;AACV01009606.1/13757-13637 39947:Oryza sativa
Japonica Group
Length = 121
Score = 44.1 bits (22), Expect = 4e-04
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 12 tactccctccgtcccaaaataa 33
||||||||||||||||||||||
Sbjct: 5 tactccctccgtcccaaaataa 26
>RF00906;MIR1122;AAAA02028034.1/27580-27414 39946:Oryza sativa
Indica Group
Length = 167
Score = 44.1 bits (22), Expect = 4e-04
Identities = 22/22 (100%)
Strand = Plus / Minus
Query: 11 atactccctccgtcccaaaata 32
||||||||||||||||||||||
Sbjct: 164 atactccctccgtcccaaaata 143
>RF00906;MIR1122;AAAA02004295.1/15025-15180 39946:Oryza sativa
Indica Group
Length = 156
Score = 44.1 bits (22), Expect = 4e-04
Identities = 22/22 (100%)
Strand = Plus / Minus
Query: 11 atactccctccgtcccaaaata 32
||||||||||||||||||||||
Sbjct: 153 atactccctccgtcccaaaata 132
>RF00906;MIR1122;AAAA02006274.1/23456-23551 39946:Oryza sativa
Indica Group
Length = 96
Score = 44.1 bits (22), Expect = 4e-04
Identities = 22/22 (100%)
Strand = Plus / Minus
Query: 11 atactccctccgtcccaaaata 32
||||||||||||||||||||||
Sbjct: 93 atactccctccgtcccaaaata 72
>RF00906;MIR1122;AC229754.2/94242-94126 63629:Oryza minuta
Length = 117
Score = 44.1 bits (22), Expect = 4e-04
Identities = 22/22 (100%)
Strand = Plus / Minus
Query: 12 tactccctccgtcccaaaataa 33
||||||||||||||||||||||
Sbjct: 113 tactccctccgtcccaaaataa 92
>RF00906;MIR1122;AP008207.1/22739295-22739406 39947:Oryza sativa
Japonica Group
Length = 112
Score = 44.1 bits (22), Expect = 4e-04
Identities = 22/22 (100%)
Strand = Plus / Minus
Query: 11 atactccctccgtcccaaaata 32
||||||||||||||||||||||
Sbjct: 109 atactccctccgtcccaaaata 88
>RF00906;MIR1122;AC079357.3/127350-127255 39947:Oryza sativa
Japonica Group
Length = 96
Score = 44.1 bits (22), Expect = 4e-04
Identities = 22/22 (100%)
Strand = Plus / Minus
Query: 11 atactccctccgtcccaaaata 32
||||||||||||||||||||||
Sbjct: 93 atactccctccgtcccaaaata 72
>RF00906;MIR1122;AACV01024869.1/7310-7232 39947:Oryza sativa
Japonica Group
Length = 79
Score = 44.1 bits (22), Expect = 4e-04
Identities = 22/22 (100%)
Strand = Plus / Minus
Query: 11 atactccctccgtcccaaaata 32
||||||||||||||||||||||
Sbjct: 76 atactccctccgtcccaaaata 55
>RF00906;MIR1122;AP003883.3/40264-40104 39947:Oryza sativa
Japonica Group
Length = 161
Score = 44.1 bits (22), Expect = 4e-04
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 11 atactccctccgtcccaaaata 32
||||||||||||||||||||||
Sbjct: 4 atactccctccgtcccaaaata 25
>RF00906;MIR1122;AP005802.3/90428-90511 39947:Oryza sativa
Japonica Group
Length = 84
Score = 44.1 bits (22), Expect = 4e-04
Identities = 22/22 (100%)
Strand = Plus / Minus
Query: 9 acatactccctccgtcccaaaa 30
||||||||||||||||||||||
Sbjct: 83 acatactccctccgtcccaaaa 62
>RF00906;MIR1122;AP008215.1/19940245-19940356 39947:Oryza sativa
Japonica Group
Length = 112
Score = 44.1 bits (22), Expect = 4e-04
Identities = 22/22 (100%)
Strand = Plus / Minus
Query: 11 atactccctccgtcccaaaata 32
||||||||||||||||||||||
Sbjct: 109 atactccctccgtcccaaaata 88
>RF00906;MIR1122;AL831796.5/20323-20408 4530:Oryza sativa (rice)
Length = 86
Score = 44.1 bits (22), Expect = 4e-04
Identities = 22/22 (100%)
Strand = Plus / Minus
Query: 11 atactccctccgtcccaaaata 32
||||||||||||||||||||||
Sbjct: 83 atactccctccgtcccaaaata 62
>RF00906;MIR1122;AC226706.2/62906-62750 63629:Oryza minuta
Length = 157
Score = 44.1 bits (22), Expect = 4e-04
Identities = 22/22 (100%)
Strand = Plus / Minus
Query: 11 atactccctccgtcccaaaata 32
||||||||||||||||||||||
Sbjct: 154 atactccctccgtcccaaaata 133
>RF00906;MIR1122;AACV01013954.1/10702-10856 39947:Oryza sativa
Japonica Group
Length = 155
Score = 44.1 bits (22), Expect = 4e-04
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 11 atactccctccgtcccaaaata 32
||||||||||||||||||||||
Sbjct: 4 atactccctccgtcccaaaata 25
>RF00906;MIR1122;AP003381.3/77030-76947 39947:Oryza sativa
Japonica Group
Length = 84
Score = 44.1 bits (22), Expect = 4e-04
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 11 atactccctccgtcccaaaata 32
||||||||||||||||||||||
Sbjct: 4 atactccctccgtcccaaaata 25
>RF00906;MIR1122;AP008212.1/6831401-6831305 39947:Oryza sativa
Japonica Group
Length = 97
Score = 44.1 bits (22), Expect = 4e-04
Identities = 22/22 (100%)
Strand = Plus / Minus
Query: 12 tactccctccgtcccaaaataa 33
||||||||||||||||||||||
Sbjct: 93 tactccctccgtcccaaaataa 72
>RF00906;MIR1122;AY947286.1/128-10 4530:Oryza sativa (rice)
Length = 119
Score = 44.1 bits (22), Expect = 4e-04
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 11 atactccctccgtcccaaaata 32
||||||||||||||||||||||
Sbjct: 4 atactccctccgtcccaaaata 25
>RF00906;MIR1122;AC093953.2/44822-44955 39947:Oryza sativa Japonica
Group
Length = 134
Score = 44.1 bits (22), Expect = 4e-04
Identities = 22/22 (100%)
Strand = Plus / Minus
Query: 11 atactccctccgtcccaaaata 32
||||||||||||||||||||||
Sbjct: 131 atactccctccgtcccaaaata 110
>RF00906;MIR1122;AACV01001520.1/25871-25960 39947:Oryza sativa
Japonica Group
Length = 90
Score = 44.1 bits (22), Expect = 4e-04
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 12 tactccctccgtcccaaaataa 33
||||||||||||||||||||||
Sbjct: 5 tactccctccgtcccaaaataa 26
>RF00906;MIR1122;AAAA02007660.1/3740-3838 39946:Oryza sativa
Indica Group
Length = 99
Score = 44.1 bits (22), Expect = 4e-04
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 11 atactccctccgtcccaaaata 32
||||||||||||||||||||||
Sbjct: 4 atactccctccgtcccaaaata 25
Score = 44.1 bits (22), Expect = 4e-04
Identities = 22/22 (100%)
Strand = Plus / Minus
Query: 11 atactccctccgtcccaaaata 32
||||||||||||||||||||||
Sbjct: 96 atactccctccgtcccaaaata 75
>RF00906;MIR1122;AK288180.1/1387-1262 39947:Oryza sativa Japonica
Group
Length = 126
Score = 44.1 bits (22), Expect = 4e-04
Identities = 22/22 (100%)
Strand = Plus / Minus
Query: 11 atactccctccgtcccaaaata 32
||||||||||||||||||||||
Sbjct: 123 atactccctccgtcccaaaata 102
>RF00906;MIR1122;AAAA02006222.1/38105-37993 39946:Oryza sativa
Indica Group
Length = 113
Score = 44.1 bits (22), Expect = 4e-04
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 12 tactccctccgtcccaaaataa 33
||||||||||||||||||||||
Sbjct: 5 tactccctccgtcccaaaataa 26
>RF00906;MIR1122;AP008207.1/24395058-24395107 39947:Oryza sativa
Japonica Group
Length = 50
Score = 44.1 bits (22), Expect = 4e-04
Identities = 22/22 (100%)
Strand = Plus / Minus
Query: 11 atactccctccgtcccaaaata 32
||||||||||||||||||||||
Sbjct: 47 atactccctccgtcccaaaata 26
>RF00906;MIR1122;AP003412.4/28754-28834 39947:Oryza sativa
Japonica Group
Length = 81
Score = 44.1 bits (22), Expect = 4e-04
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 9 acatactccctccgtcccaaaa 30
||||||||||||||||||||||
Sbjct: 2 acatactccctccgtcccaaaa 23
>RF00906;MIR1122;AP008215.1/21144119-21144034 39947:Oryza sativa
Japonica Group
Length = 86
Score = 44.1 bits (22), Expect = 4e-04
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 11 atactccctccgtcccaaaata 32
||||||||||||||||||||||
Sbjct: 4 atactccctccgtcccaaaata 25