miRNEST 2.0: an integrative microRNA resource miRNEST 2.0, an integrative microRNA resource :: BLAST


BLASTN 2.2.20 [Feb-08-2009]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.
>RF00906;MIR1122;AY943294.1/62260-62364 112509:Hordeum vulgare
           subsp. vulgare (domesticated barley)
          Length = 105

 Score =  121 bits (61), Expect = 2e-27
 Identities = 88/97 (90%)
 Strand = Plus / Plus

                                                                       
Query: 12  tactccctccgtcccaaaataagtgtcttaaacttaatacaattttgttctagagcaagt 71
           |||||||||||| |||||||||||||||||| |||||||||||||||| ||| | | | |
Sbjct: 5   tactccctccgttccaaaataagtgtcttaagcttaatacaattttgtactaaatctaat 64

                                                
Query: 72  gcaaagttgagacagttattttgagacggaggaagta 108
            |||||||||||||||||||||| |||||||||||||
Sbjct: 65  acaaagttgagacagttattttgggacggaggaagta 101




>RF00906;MIR1122;AJ234485.1/114-218 4513:Hordeum vulgare
          Length = 105

 Score =  121 bits (61), Expect = 2e-27
 Identities = 88/97 (90%)
 Strand = Plus / Plus

                                                                       
Query: 12  tactccctccgtcccaaaataagtgtcttaaacttaatacaattttgttctagagcaagt 71
           ||||||||||||| ||||||||||||||||| |||| ||||||||||| ||||||| |||
Sbjct: 5   tactccctccgtctcaaaataagtgtcttaatcttagtacaattttgtactagagctagt 64

                                                
Query: 72  gcaaagttgagacagttattttgagacggaggaagta 108
            ||| |||||||||||||||||||||| |||| ||||
Sbjct: 65  acaatgttgagacagttattttgagacagagggagta 101




>RF00906;MIR1122;AY133251.1/901-1005 112509:Hordeum vulgare subsp.
           vulgare (domesticated barley)
          Length = 105

 Score =  115 bits (58), Expect = 1e-25
 Identities = 88/98 (89%)
 Strand = Plus / Plus

                                                                       
Query: 11  atactccctccgtcccaaaataagtgtcttaaacttaatacaattttgttctagagcaag 70
           ||||||||||||| |||||||||||||||| | | || ||||||||||| ||||||| ||
Sbjct: 4   atactccctccgttccaaaataagtgtcttgagcgtagtacaattttgtactagagctag 63

                                                 
Query: 71  tgcaaagttgagacagttattttgagacggaggaagta 108
           | |||||||||||||||||||||| |||||||| ||||
Sbjct: 64  tacaaagttgagacagttattttgggacggagggagta 101



 Score = 48.1 bits (24), Expect = 3e-05
 Identities = 27/28 (96%)
 Strand = Plus / Minus

                                       
Query: 12  tactccctccgtcccaaaataagtgtct 39
           |||||||||||||||||||||| |||||
Sbjct: 101 tactccctccgtcccaaaataactgtct 74




>RF00906;MIR1122;AJ249141.1/1014-910 4513:Hordeum vulgare
          Length = 105

 Score =  113 bits (57), Expect = 5e-25
 Identities = 87/97 (89%)
 Strand = Plus / Plus

                                                                       
Query: 15  tccctccgtcccaaaataagtgtcttaaacttaatacaattttgttctagagcaagtgca 74
           |||||| |||| |||||||||||||||| |||| ||||| ||||| ||||||| | | ||
Sbjct: 8   tccctcggtcctaaaataagtgtcttaagcttagtacaactttgtactagagctaataca 67

                                                
Query: 75  aagttgagacagttattttgagacggaggaagtataa 111
           ||||||||||||||||||||||||||||| |||||||
Sbjct: 68  aagttgagacagttattttgagacggagggagtataa 104




>RF00906;MIR1122;EU282755.1/953-849 112509:Hordeum vulgare subsp.
           vulgare (domesticated barley)
          Length = 105

 Score =  101 bits (51), Expect = 2e-21
 Identities = 87/99 (87%)
 Strand = Plus / Plus

                                                                       
Query: 12  tactccctccgtcccaaaataagtgtcttaaacttaatacaattttgttctagagcaagt 71
           |||||||||||||||||||||||||||| || |||| |  |||||||| ||| ||| |||
Sbjct: 5   tactccctccgtcccaaaataagtgtctcaagcttagtgtaattttgtactacagctagt 64

                                                  
Query: 72  gcaaagttgagacagttattttgagacggaggaagtata 110
            ||||||||||||| |||||||| |||||||| ||||||
Sbjct: 65  acaaagttgagacacttattttgggacggagggagtata 103



 Score = 58.0 bits (29), Expect = 3e-08
 Identities = 29/29 (100%)
 Strand = Plus / Minus

                                        
Query: 11  atactccctccgtcccaaaataagtgtct 39
           |||||||||||||||||||||||||||||
Sbjct: 102 atactccctccgtcccaaaataagtgtct 74




>RF00906;MIR1122;AK249560.1/988-1092 112509:Hordeum vulgare subsp.
           vulgare (domesticated barley)
          Length = 105

 Score = 99.6 bits (50), Expect = 8e-21
 Identities = 80/90 (88%)
 Strand = Plus / Minus

                                                                       
Query: 12  tactccctccgtcccaaaataagtgtcttaaacttaatacaattttgttctagagcaagt 71
           |||||||||||||||||||||| ||||| ||||||||||||| ||||| ||| ||| |||
Sbjct: 101 tactccctccgtcccaaaataactgtctcaaacttaatacaagtttgtactatagctagt 42

                                         
Query: 72  gcaaagttgagacagttattttgagacgga 101
             |||||||||||| |||||||| ||||||
Sbjct: 41  ataaagttgagacacttattttgggacgga 12



 Score = 50.1 bits (25), Expect = 7e-06
 Identities = 28/29 (96%)
 Strand = Plus / Plus

                                       
Query: 11 atactccctccgtcccaaaataagtgtct 39
          ||||||| |||||||||||||||||||||
Sbjct: 4  atactccatccgtcccaaaataagtgtct 32



 Score = 46.1 bits (23), Expect = 1e-04
 Identities = 29/31 (93%)
 Strand = Plus / Plus

                                          
Query: 78  ttgagacagttattttgagacggaggaagta 108
           ||||||||||||||||| |||||||| ||||
Sbjct: 71  ttgagacagttattttgggacggagggagta 101




>RF00906;MIR1122;EU282771.1/632-528 112509:Hordeum vulgare subsp.
           vulgare (domesticated barley)
          Length = 105

 Score = 97.6 bits (49), Expect = 3e-20
 Identities = 85/97 (87%)
 Strand = Plus / Plus

                                                                       
Query: 12  tactccctccgtcccaaaataagtgtcttaaacttaatacaattttgttctagagcaagt 71
           |||||||||||||||||||||| | ||| ||||||| ||||| ||| | ||||||| |||
Sbjct: 5   tactccctccgtcccaaaataactttctcaaacttagtacaactttatactagagctagt 64

                                                
Query: 72  gcaaagttgagacagttattttgagacggaggaagta 108
           | |||||||||| | ||||||||||||||||| ||||
Sbjct: 65  gtaaagttgagatacttattttgagacggagggagta 101




>RF00906;MIR1122;AJ400714.1/3663-3767 4565:Triticum aestivum (bread
           wheat)
          Length = 105

 Score = 93.7 bits (47), Expect = 5e-19
 Identities = 80/91 (87%)
 Strand = Plus / Minus

                                                                       
Query: 11  atactccctccgtcccaaaataagtgtcttaaacttaatacaattttgttctagagcaag 70
           ||||||||||||||||||||||||||||| || |||| ||||| ||||| ||||||  ||
Sbjct: 102 atactccctccgtcccaaaataagtgtctcaaccttagtacaactttgtactagagttag 43

                                          
Query: 71  tgcaaagttgagacagttattttgagacgga 101
           || ||| |||||||| |||||||| ||||||
Sbjct: 42  tgtaaaattgagacacttattttgggacgga 12



 Score = 48.1 bits (24), Expect = 3e-05
 Identities = 27/28 (96%)
 Strand = Plus / Plus

                                      
Query: 12 tactccctccgtcccaaaataagtgtct 39
          |||||| |||||||||||||||||||||
Sbjct: 5  tactccttccgtcccaaaataagtgtct 32




>RF00906;MIR1122;FJ184990.1/3303-3406 4565:Triticum aestivum (bread
           wheat)
          Length = 104

 Score = 93.7 bits (47), Expect = 5e-19
 Identities = 87/99 (87%), Gaps = 1/99 (1%)
 Strand = Plus / Plus

                                                                       
Query: 11  atactccctccgtcccaaaataagtgtcttaaacttaatacaattttgttctagagcaag 70
           ||||||||||||||||||||||||||||| || |||| ||||||||| | ||||||  ||
Sbjct: 4   atactccctccgtcccaaaataagtgtctcaaccttagtacaattttatactagagttag 63

                                                  
Query: 71  tgcaaagttgagacagttattttgagacggaggaagtat 109
           | ||||| ||||||| |||||||| |||||||| |||||
Sbjct: 64  tacaaag-tgagacacttattttgggacggagggagtat 101



 Score = 58.0 bits (29), Expect = 3e-08
 Identities = 29/29 (100%)
 Strand = Plus / Minus

                                        
Query: 11  atactccctccgtcccaaaataagtgtct 39
           |||||||||||||||||||||||||||||
Sbjct: 101 atactccctccgtcccaaaataagtgtct 73




>RF00906;MIR1122;DQ871219.1/106890-106994 85692:Triticum turgidum
           subsp. dicoccoides
          Length = 105

 Score = 91.7 bits (46), Expect = 2e-18
 Identities = 85/98 (86%)
 Strand = Plus / Plus

                                                                       
Query: 11  atactccctccgtcccaaaataagtgtcttaaacttaatacaattttgttctagagcaag 70
           |||||||||||||||||||||||||||||| | |||| || || ||||| ||||||  ||
Sbjct: 4   atactccctccgtcccaaaataagtgtcttgagcttagtaaaaatttgtactagagatag 63

                                                 
Query: 71  tgcaaagttgagacagttattttgagacggaggaagta 108
           | ||||||||||||| |||||||| || ||||| ||||
Sbjct: 64  tacaaagttgagacacttattttgggatggagggagta 101



 Score = 48.1 bits (24), Expect = 3e-05
 Identities = 27/28 (96%)
 Strand = Plus / Minus

                                       
Query: 12  tactccctccgtcccaaaataagtgtct 39
           |||||||||| |||||||||||||||||
Sbjct: 101 tactccctccatcccaaaataagtgtct 74




>RF00906;MIR1122;AK252392.1/1279-1175 112509:Hordeum vulgare subsp.
           vulgare (domesticated barley)
          Length = 105

 Score = 91.7 bits (46), Expect = 2e-18
 Identities = 85/98 (86%)
 Strand = Plus / Plus

                                                                       
Query: 11  atactccctccgtcccaaaataagtgtcttaaacttaatacaattttgttctagagcaag 70
           |||| ||||||||||||||||||||||||||| |||| ||||||||| | |  |||| ||
Sbjct: 4   ataccccctccgtcccaaaataagtgtcttaagcttagtacaattttatacatgagctag 63

                                                 
Query: 71  tgcaaagttgagacagttattttgagacggaggaagta 108
           | ||||||| |||||| ||||||| |||||||| ||||
Sbjct: 64  tacaaagttaagacagatattttgggacggagggagta 101



 Score = 46.1 bits (23), Expect = 1e-04
 Identities = 29/31 (93%)
 Strand = Plus / Minus

                                          
Query: 12  tactccctccgtcccaaaataagtgtcttaa 42
           |||||||||||||||||||||  ||||||||
Sbjct: 101 tactccctccgtcccaaaatatctgtcttaa 71




>RF00906;MIR1122;EU593539.1/914-1018 4513:Hordeum vulgare
          Length = 105

 Score = 91.7 bits (46), Expect = 2e-18
 Identities = 85/98 (86%)
 Strand = Plus / Plus

                                                                       
Query: 12  tactccctccgtcccaaaataagtgtcttaaacttaatacaattttgttctagagcaagt 71
           |||||||||||||||||||||| |||||||| |||| || || ||| | ||||| | |||
Sbjct: 5   tactccctccgtcccaaaataactgtcttaagcttagtataaatttatactagatctagt 64

                                                 
Query: 72  gcaaagttgagacagttattttgagacggaggaagtat 109
             ||||||||||||||||||||| |||||||| |||||
Sbjct: 65  ataaagttgagacagttattttgggacggagggagtat 102



 Score = 50.1 bits (25), Expect = 7e-06
 Identities = 28/29 (96%)
 Strand = Plus / Minus

                                        
Query: 11  atactccctccgtcccaaaataagtgtct 39
           ||||||||||||||||||||||| |||||
Sbjct: 102 atactccctccgtcccaaaataactgtct 74




>RF00906;MIR1122;EU282239.1/1196-1300 52152:Elymus repens
          Length = 105

 Score = 91.7 bits (46), Expect = 2e-18
 Identities = 85/98 (86%)
 Strand = Plus / Plus

                                                                       
Query: 11  atactccctccgtcccaaaataagtgtcttaaacttaatacaattttgttctagagcaag 70
           ||||||||||||||||||||||||||||| || |||| ||||| ||||| ||| ||  | 
Sbjct: 4   atactccctccgtcccaaaataagtgtctcaagcttagtacaactttgtactaaagttaa 63

                                                 
Query: 71  tgcaaagttgagacagttattttgagacggaggaagta 108
           | ||||||||||||| |||||||| |||||||| ||||
Sbjct: 64  tacaaagttgagacatttattttgggacggagggagta 101



 Score = 48.1 bits (24), Expect = 3e-05
 Identities = 27/28 (96%)
 Strand = Plus / Minus

                                       
Query: 12  tactccctccgtcccaaaataagtgtct 39
           |||||||||||||||||||||| |||||
Sbjct: 101 tactccctccgtcccaaaataaatgtct 74




>RF00906;MIR1122;EU282768.1/632-528 112509:Hordeum vulgare subsp.
           vulgare (domesticated barley)
          Length = 105

 Score = 89.7 bits (45), Expect = 8e-18
 Identities = 84/97 (86%)
 Strand = Plus / Plus

                                                                       
Query: 12  tactccctccgtcccaaaataagtgtcttaaacttaatacaattttgttctagagcaagt 71
           |||||||||||||||||||||| | ||| ||||||| ||||| ||| | ||||||| |||
Sbjct: 5   tactccctccgtcccaaaataactttctcaaacttagtacaactttatactagagctagt 64

                                                
Query: 72  gcaaagttgagacagttattttgagacggaggaagta 108
           | |||| ||||| | ||||||||||||||||| ||||
Sbjct: 65  gtaaagctgagatacttattttgagacggagggagta 101




>RF00906;MIR1122;DQ445238.1/5626-5730 112509:Hordeum vulgare subsp.
           vulgare (domesticated barley)
          Length = 105

 Score = 83.8 bits (42), Expect = 5e-16
 Identities = 84/98 (85%)
 Strand = Plus / Plus

                                                                       
Query: 12  tactccctccgtcccaaaataagtgtcttaaacttaatacaattttgttctagagcaagt 71
           |||||||||||||||||||||| |||||||| |||| || || ||| |  |||| | |||
Sbjct: 5   tactccctccgtcccaaaataactgtcttaagcttagtataaatttatattagatctagt 64

                                                 
Query: 72  gcaaagttgagacagttattttgagacggaggaagtat 109
             ||||||||||||||||||||| |||||||| |||||
Sbjct: 65  ataaagttgagacagttattttgggacggagggagtat 102



 Score = 50.1 bits (25), Expect = 7e-06
 Identities = 28/29 (96%)
 Strand = Plus / Minus

                                        
Query: 11  atactccctccgtcccaaaataagtgtct 39
           ||||||||||||||||||||||| |||||
Sbjct: 102 atactccctccgtcccaaaataactgtct 74




>RF00906;MIR1122;DQ995510.1/1615-1718 4513:Hordeum vulgare
          Length = 104

 Score = 83.8 bits (42), Expect = 5e-16
 Identities = 85/98 (86%), Gaps = 1/98 (1%)
 Strand = Plus / Plus

                                                                       
Query: 11  atactccctccgtcccaaaataagtgtcttaaacttaatacaattttgttctagagcaag 70
           |||||||||||||| |||||||| ||||| || |||  ||||| ||||| ||||||| ||
Sbjct: 4   atactccctccgtctcaaaataactgtctcaa-ctttgtacaactttgtactagagctag 62

                                                 
Query: 71  tgcaaagttgagacagttattttgagacggaggaagta 108
           | |||||||||||||||||||||| || ||||| ||||
Sbjct: 63  tacaaagttgagacagttattttgggatggagggagta 100



 Score = 65.9 bits (33), Expect = 1e-10
 Identities = 36/37 (97%)
 Strand = Plus / Minus

                                                
Query: 73  caaagttgagacagttattttgagacggaggaagtat 109
           ||||||||||||||||||||||||||||||| |||||
Sbjct: 40  caaagttgagacagttattttgagacggagggagtat 4




>RF00906;MIR1122;EU282250.1/1190-1294 52152:Elymus repens
          Length = 105

 Score = 83.8 bits (42), Expect = 5e-16
 Identities = 84/98 (85%)
 Strand = Plus / Plus

                                                                       
Query: 11  atactccctccgtcccaaaataagtgtcttaaacttaatacaattttgttctagagcaag 70
           ||||||||||||||||||||||||||||| || |||| |||||  |||| ||| ||  | 
Sbjct: 4   atactccctccgtcccaaaataagtgtctcaagcttagtacaaccttgtactaaagttaa 63

                                                 
Query: 71  tgcaaagttgagacagttattttgagacggaggaagta 108
           | ||||||||||||| |||||||| |||||||| ||||
Sbjct: 64  tacaaagttgagacatttattttgggacggagggagta 101



 Score = 48.1 bits (24), Expect = 3e-05
 Identities = 27/28 (96%)
 Strand = Plus / Minus

                                       
Query: 12  tactccctccgtcccaaaataagtgtct 39
           |||||||||||||||||||||| |||||
Sbjct: 101 tactccctccgtcccaaaataaatgtct 74




>RF00906;MIR1122;DQ445236.1/13423-13319 112509:Hordeum vulgare
           subsp. vulgare (domesticated barley)
          Length = 105

 Score = 81.8 bits (41), Expect = 2e-15
 Identities = 86/101 (85%)
 Strand = Plus / Minus

                                                                       
Query: 11  atactccctccgtcccaaaataagtgtcttaaacttaatacaattttgttctagagcaag 70
           ||||||||||||| ||||||||| | ||| || |||| ||||| ||||| ||||||| ||
Sbjct: 102 atactccctccgttccaaaataactatctcaagcttagtacaactttgtactagagctag 43

                                                    
Query: 71  tgcaaagttgagacagttattttgagacggaggaagtataa 111
           | |||| |||||||| ||||||||  ||||||| |||||||
Sbjct: 42  tacaaatttgagacacttattttggaacggagggagtataa 2



 Score = 50.1 bits (25), Expect = 7e-06
 Identities = 28/29 (96%)
 Strand = Plus / Plus

                                       
Query: 11 atactccctccgtcccaaaataagtgtct 39
          ||||||||||||| |||||||||||||||
Sbjct: 4  atactccctccgttccaaaataagtgtct 32




>RF00906;MIR1122;FJ236275.1/674-570 4573:Aegilops speltoides
          Length = 105

 Score = 73.8 bits (37), Expect = 5e-13
 Identities = 82/97 (84%)
 Strand = Plus / Plus

                                                                       
Query: 12  tactccctccgtcccaaaataagtgtcttaaacttaatacaattttgttctagagcaagt 71
           ||||||||||||| |||||||||||||| || | || ||||| ||||| ||| ||  |||
Sbjct: 5   tactccctccgtctcaaaataagtgtctcaagcctagtacaactttgtactaaagttagt 64

                                                
Query: 72  gcaaagttgagacagttattttgagacggaggaagta 108
            ||||||| ||||| |||||||| |||||||| ||||
Sbjct: 65  acaaagttaagacacttattttgggacggagggagta 101



 Score = 61.9 bits (31), Expect = 2e-09
 Identities = 31/31 (100%)
 Strand = Plus / Minus

                                          
Query: 12  tactccctccgtcccaaaataagtgtcttaa 42
           |||||||||||||||||||||||||||||||
Sbjct: 101 tactccctccgtcccaaaataagtgtcttaa 71



 Score = 46.1 bits (23), Expect = 1e-04
 Identities = 29/31 (93%)
 Strand = Plus / Minus

                                          
Query: 78  ttgagacagttattttgagacggaggaagta 108
           |||||||| ||||||||||||||||| ||||
Sbjct: 35  ttgagacacttattttgagacggagggagta 5




>RF00906;MIR1122;AF474373.1/50497-50394 112509:Hordeum vulgare
          subsp. vulgare (domesticated barley)
          Length = 104

 Score = 71.9 bits (36), Expect = 2e-12
 Identities = 72/84 (85%)
 Strand = Plus / Plus

                                                                      
Query: 11 atactccctccgtcccaaaataagtgtcttaaacttaatacaattttgttctagagcaag 70
          |||||| |||||||||||||||| ||||| || | || ||||| ||||| ||||| | ||
Sbjct: 4  atactcactccgtcccaaaataactgtctcaagcctagtacaactttgtactagaactag 63

                                  
Query: 71 tgcaaagttgagacagttattttg 94
          | ||||||||||||| ||||||||
Sbjct: 64 tacaaagttgagacacttattttg 87




>RF00906;MIR1122;X83518.1/7301-7197 4513:Hordeum vulgare
          Length = 105

 Score = 71.9 bits (36), Expect = 2e-12
 Identities = 72/84 (85%)
 Strand = Plus / Plus

                                                                      
Query: 11 atactccctccgtcccaaaataagtgtcttaaacttaatacaattttgttctagagcaag 70
          ||||||||||| || |||||||| ||||| || |||| ||||| |||||  |||||| ||
Sbjct: 4  atactccctccatctcaaaataactgtctcaagcttagtacaactttgtagtagagctag 63

                                  
Query: 71 tgcaaagttgagacagttattttg 94
          | ||||||||||||| ||||||||
Sbjct: 64 tacaaagttgagacacttattttg 87



 Score = 50.1 bits (25), Expect = 7e-06
 Identities = 31/33 (93%)
 Strand = Plus / Minus

                                            
Query: 78  ttgagacagttattttgagacggaggaagtata 110
           |||||||||||||||||||| ||||| ||||||
Sbjct: 35  ttgagacagttattttgagatggagggagtata 3




>RF00906;MIR1122;AK249748.1/2677-2573 112509:Hordeum vulgare subsp.
           vulgare (domesticated barley)
          Length = 105

 Score = 69.9 bits (35), Expect = 7e-12
 Identities = 71/83 (85%)
 Strand = Plus / Minus

                                                                       
Query: 12  tactccctccgtcccaaaataagtgtcttaaacttaatacaattttgttctagagcaagt 71
           ||||||||||||| |||||||| ||||||||||||| || || ||| |  || ||| |||
Sbjct: 101 tactccctccgtcgcaaaataaatgtcttaaacttagtataaatttatagtaaagctagt 42

                                  
Query: 72  gcaaagttgagacagttattttg 94
            ||||||| ||||||||||||||
Sbjct: 41  acaaagttaagacagttattttg 19




>RF00906;MIR1122;EU282770.1/593-711 112509:Hordeum vulgare subsp.
           vulgare (domesticated barley)
          Length = 119

 Score = 69.9 bits (35), Expect = 7e-12
 Identities = 74/87 (85%)
 Strand = Plus / Minus

                                                                       
Query: 22  gtcccaaaataagtgtcttaaacttaatacaattttgttctagagcaagtgcaaagttga 81
           |||||||||||| | ||| ||||||| ||||| ||| | ||||||| || | ||||||||
Sbjct: 91  gtcccaaaataactttctcaaacttagtacaactttatactagagctagggtaaagttga 32

                                      
Query: 82  gacagttattttgagacggaggaagta 108
           ||||  |||||||||||||||| ||||
Sbjct: 31  gacacctattttgagacggagggagta 5



 Score = 46.1 bits (23), Expect = 1e-04
 Identities = 26/27 (96%)
 Strand = Plus / Minus

                                      
Query: 12  tactccctccgtcccaaaataagtgtc 38
           |||||||||||||||||||||| ||||
Sbjct: 115 tactccctccgtcccaaaataactgtc 89




>RF00906;MIR1122;AY268139.1/69673-69778 4513:Hordeum vulgare
          Length = 106

 Score = 67.9 bits (34), Expect = 3e-11
 Identities = 37/38 (97%)
 Strand = Plus / Plus

                                                 
Query: 74  aaagttgagacagttattttgagacggaggaagtataa 111
           |||||| |||||||||||||||||||||||||||||||
Sbjct: 68  aaagttaagacagttattttgagacggaggaagtataa 105




>RF00906;MIR1122;AF521177.1/206122-206018 4513:Hordeum vulgare
          Length = 105

 Score = 67.9 bits (34), Expect = 3e-11
 Identities = 82/98 (83%)
 Strand = Plus / Plus

                                                                       
Query: 11  atactccctccgtcccaaaataagtgtcttaaacttaatacaattttgttctagagcaag 70
           ||||||||||| |  |||||||| ||| | |  |||| ||||| ||||| ||||||| ||
Sbjct: 4   atactccctccatttcaaaataattgtttcatgcttagtacaactttgtactagagctag 63

                                                 
Query: 71  tgcaaagttgagacagttattttgagacggaggaagta 108
           | ||||||||||||| ||||||||| ||||||| ||||
Sbjct: 64  tacaaagttgagacatttattttgaaacggagggagta 101




>RF00906;MIR1122;DQ175992.1/50-154 112509:Hordeum vulgare subsp.
           vulgare (domesticated barley)
          Length = 105

 Score = 67.9 bits (34), Expect = 3e-11
 Identities = 70/82 (85%)
 Strand = Plus / Plus

                                                                       
Query: 27  aaaataagtgtcttaaacttaatacaattttgttctagagcaagtgcaaagttgagacag 86
           |||||||||||||||| |||| || |||||| | ||||||| ||  ||||||| ||||| 
Sbjct: 20  aaaataagtgtcttaagcttagtataattttatactagagctagaacaaagttaagacaa 79

                                 
Query: 87  ttattttgagacggaggaagta 108
           |||||||| |||||||| ||||
Sbjct: 80  ttattttgggacggagggagta 101



 Score = 54.0 bits (27), Expect = 4e-07
 Identities = 30/31 (96%)
 Strand = Plus / Minus

                                          
Query: 12  tactccctccgtcccaaaataagtgtcttaa 42
           |||||||||||||||||||||| ||||||||
Sbjct: 101 tactccctccgtcccaaaataattgtcttaa 71




>RF00906;MIR1122;AY821694.1/1308-1197 37674:Crithopsis delileana
          Length = 112

 Score = 58.0 bits (29), Expect = 3e-08
 Identities = 29/29 (100%)
 Strand = Plus / Plus

                                       
Query: 12 tactccctccgtcccaaaataagtgtctt 40
          |||||||||||||||||||||||||||||
Sbjct: 5  tactccctccgtcccaaaataagtgtctt 33



 Score = 52.0 bits (26), Expect = 2e-06
 Identities = 29/30 (96%)
 Strand = Plus / Minus

                                         
Query: 10  catactccctccgtcccaaaataagtgtct 39
           |||||||||||| |||||||||||||||||
Sbjct: 110 catactccctccatcccaaaataagtgtct 81




>RF00906;MIR1122;DQ901436.1/1229-1333 4565:Triticum aestivum (bread
           wheat)
          Length = 105

 Score = 56.0 bits (28), Expect = 1e-07
 Identities = 76/92 (82%)
 Strand = Plus / Minus

                                                                       
Query: 12  tactccctccgtcccaaaataagtgtcttaaacttaatacaattttgttctagagcaagt 71
           ||||| |||| || |||||||||||||| ||   || ||||| |||||  || ||| |||
Sbjct: 101 tactcactccatctcaaaataagtgtctcaactctagtacaactttgtattaaagctagt 42

                                           
Query: 72  gcaaagttgagacagttattttgagacggagg 103
            ||||||||||||| |||||||| ||||||||
Sbjct: 41  acaaagttgagacacttattttgggacggagg 10



 Score = 52.0 bits (26), Expect = 2e-06
 Identities = 26/26 (100%)
 Strand = Plus / Plus

                                    
Query: 14 ctccctccgtcccaaaataagtgtct 39
          ||||||||||||||||||||||||||
Sbjct: 7  ctccctccgtcccaaaataagtgtct 32




>RF00906;MIR1122;AB183299.1/312-404 4565:Triticum aestivum (bread
           wheat)
          Length = 93

 Score = 56.0 bits (28), Expect = 1e-07
 Identities = 34/36 (94%)
 Strand = Plus / Plus

                                               
Query: 75  aagttgagacagttattttgagacggaggaagtata 110
           ||||||||||| |||||||| |||||||||||||||
Sbjct: 56  aagttgagacacttattttgggacggaggaagtata 91



 Score = 52.0 bits (26), Expect = 2e-06
 Identities = 26/26 (100%)
 Strand = Plus / Plus

                                    
Query: 14 ctccctccgtcccaaaataagtgtct 39
          ||||||||||||||||||||||||||
Sbjct: 7  ctccctccgtcccaaaataagtgtct 32



 Score = 50.1 bits (25), Expect = 7e-06
 Identities = 28/29 (96%)
 Strand = Plus / Minus

                                       
Query: 11 atactccctccgtcccaaaataagtgtct 39
          ||||| |||||||||||||||||||||||
Sbjct: 90 atacttcctccgtcccaaaataagtgtct 62



 Score = 44.1 bits (22), Expect = 4e-04
 Identities = 28/30 (93%)
 Strand = Plus / Minus

                                         
Query: 74  aaagttgagacagttattttgagacggagg 103
           |||||||||||| |||||||| ||||||||
Sbjct: 39  aaagttgagacacttattttgggacggagg 10




>RF00906;MIR1122;AF488415.1/78603-78755 4568:Triticum monococcum
          Length = 153

 Score = 56.0 bits (28), Expect = 1e-07
 Identities = 58/68 (85%)
 Strand = Plus / Plus

                                                                       
Query: 44  cttaatacaattttgttctagagcaagtgcaaagttgagacagttattttgagacggagg 103
           |||| ||||| ||||| ||| ||  ||| |||| ||||||||||||||||| ||||||||
Sbjct: 85  cttagtacaactttgtactaaagttagtacaaacttgagacagttattttgggacggagg 144

                   
Query: 104 aagtataa 111
            |||||||
Sbjct: 145 gagtataa 152



 Score = 50.1 bits (25), Expect = 7e-06
 Identities = 40/45 (88%)
 Strand = Plus / Plus

                                                       
Query: 14 ctccctccgtcccaaaataagtgtcttaaacttaatacaattttg 58
          |||||| ||||||||||||||||||| || |||| ||||| ||||
Sbjct: 7  ctcccttcgtcccaaaataagtgtctcaaccttagtacaactttg 51



 Score = 50.1 bits (25), Expect = 7e-06
 Identities = 28/29 (96%)
 Strand = Plus / Minus

                                        
Query: 11  atactccctccgtcccaaaataagtgtct 39
           ||||||||||||||||||||||| |||||
Sbjct: 150 atactccctccgtcccaaaataactgtct 122




>RF00906;MIR1122;AK250735.1/291-376 112509:Hordeum vulgare subsp.
          vulgare (domesticated barley)
          Length = 86

 Score = 56.0 bits (28), Expect = 1e-07
 Identities = 28/28 (100%)
 Strand = Plus / Plus

                                      
Query: 12 tactccctccgtcccaaaataagtgtct 39
          ||||||||||||||||||||||||||||
Sbjct: 5  tactccctccgtcccaaaataagtgtct 32




>RF00906;MIR1122;EU282251.1/1314-1209 52152:Elymus repens
          Length = 106

 Score = 56.0 bits (28), Expect = 1e-07
 Identities = 28/28 (100%)
 Strand = Plus / Minus

                                       
Query: 11  atactccctccgtcccaaaataagtgtc 38
           ||||||||||||||||||||||||||||
Sbjct: 103 atactccctccgtcccaaaataagtgtc 76



 Score = 54.0 bits (27), Expect = 4e-07
 Identities = 27/27 (100%)
 Strand = Plus / Plus

                                     
Query: 12 tactccctccgtcccaaaataagtgtc 38
          |||||||||||||||||||||||||||
Sbjct: 5  tactccctccgtcccaaaataagtgtc 31




>RF00906;MIR1122;AP008214.1/14410723-14410632 39947:Oryza sativa
          Japonica Group
          Length = 92

 Score = 56.0 bits (28), Expect = 1e-07
 Identities = 28/28 (100%)
 Strand = Plus / Plus

                                      
Query: 9  acatactccctccgtcccaaaataagtg 36
          ||||||||||||||||||||||||||||
Sbjct: 2  acatactccctccgtcccaaaataagtg 29




>RF00906;MIR1122;AY663392.1/117099-117203 4565:Triticum aestivum
           (bread wheat)
          Length = 105

 Score = 54.0 bits (27), Expect = 4e-07
 Identities = 33/35 (94%)
 Strand = Plus / Minus

                                              
Query: 8   cacatactccctccgtcccaaaataagtgtcttaa 42
           |||||||||||||| ||||||||||||||| ||||
Sbjct: 105 cacatactccctccatcccaaaataagtgtgttaa 71




>RF00906;MIR1122;FJ374625.1/3001-2870 4573:Aegilops speltoides
          Length = 132

 Score = 54.0 bits (27), Expect = 4e-07
 Identities = 27/27 (100%)
 Strand = Plus / Plus

                                     
Query: 10 catactccctccgtcccaaaataagtg 36
          |||||||||||||||||||||||||||
Sbjct: 3  catactccctccgtcccaaaataagtg 29




>RF01058;MIR806;AP008208.1/6823788-6823544 39947:Oryza sativa
           Japonica Group
          Length = 245

 Score = 52.0 bits (26), Expect = 2e-06
 Identities = 26/26 (100%)
 Strand = Plus / Minus

                                     
Query: 11  atactccctccgtcccaaaataagtg 36
           ||||||||||||||||||||||||||
Sbjct: 245 atactccctccgtcccaaaataagtg 220




>RF01058;MIR806;AL731615.4/103346-103100 39947:Oryza sativa
          Japonica Group
          Length = 247

 Score = 52.0 bits (26), Expect = 2e-06
 Identities = 26/26 (100%)
 Strand = Plus / Plus

                                    
Query: 12 tactccctccgtcccaaaataagtgt 37
          ||||||||||||||||||||||||||
Sbjct: 2  tactccctccgtcccaaaataagtgt 27




>RF01058;MIR806;AACV01025022.1/35011-35254 39947:Oryza sativa
          Japonica Group
          Length = 244

 Score = 52.0 bits (26), Expect = 2e-06
 Identities = 26/26 (100%)
 Strand = Plus / Plus

                                    
Query: 11 atactccctccgtcccaaaataagtg 36
          ||||||||||||||||||||||||||
Sbjct: 1  atactccctccgtcccaaaataagtg 26




>RF01058;MIR806;AAAA02004537.1/25464-25706 39946:Oryza sativa
          Indica Group
          Length = 243

 Score = 52.0 bits (26), Expect = 2e-06
 Identities = 26/26 (100%)
 Strand = Plus / Plus

                                    
Query: 11 atactccctccgtcccaaaataagtg 36
          ||||||||||||||||||||||||||
Sbjct: 1  atactccctccgtcccaaaataagtg 26




>RF01058;MIR806;AAAA02009876.1/3121-2881 39946:Oryza sativa Indica
           Group
          Length = 241

 Score = 52.0 bits (26), Expect = 2e-06
 Identities = 26/26 (100%)
 Strand = Plus / Minus

                                     
Query: 11  atactccctccgtcccaaaataagtg 36
           ||||||||||||||||||||||||||
Sbjct: 241 atactccctccgtcccaaaataagtg 216




>RF00906;MIR1122;U29095.1/333-439 4565:Triticum aestivum (bread
          wheat)
          Length = 107

 Score = 52.0 bits (26), Expect = 2e-06
 Identities = 26/26 (100%)
 Strand = Plus / Plus

                                    
Query: 11 atactccctccgtcccaaaataagtg 36
          ||||||||||||||||||||||||||
Sbjct: 4  atactccctccgtcccaaaataagtg 29



 Score = 44.1 bits (22), Expect = 4e-04
 Identities = 25/26 (96%)
 Strand = Plus / Minus

                                     
Query: 11  atactccctccgtcccaaaataagtg 36
           |||||||||||||||| |||||||||
Sbjct: 104 atactccctccgtcccgaaataagtg 79




>RF00906;MIR1122;DQ267106.1/62901-62968 4572:Triticum urartu
          Length = 68

 Score = 52.0 bits (26), Expect = 2e-06
 Identities = 26/26 (100%)
 Strand = Plus / Plus

                                    
Query: 11 atactccctccgtcccaaaataagtg 36
          ||||||||||||||||||||||||||
Sbjct: 4  atactccctccgtcccaaaataagtg 29




>RF00906;MIR1122;FJ491378.1/3751-3855 4550:Secale cereale (rye)
          Length = 105

 Score = 52.0 bits (26), Expect = 2e-06
 Identities = 29/30 (96%)
 Strand = Plus / Plus

                                        
Query: 9  acatactccctccgtcccaaaataagtgtc 38
          ||||| ||||||||||||||||||||||||
Sbjct: 2  acatattccctccgtcccaaaataagtgtc 31



 Score = 46.1 bits (23), Expect = 1e-04
 Identities = 26/27 (96%)
 Strand = Plus / Minus

                                      
Query: 12  tactccctccgtcccaaaataagtgtc 38
           ||||||| |||||||||||||||||||
Sbjct: 101 tactcccgccgtcccaaaataagtgtc 75




>RF00906;MIR1122;FJ491378.1/4581-4466 4550:Secale cereale (rye)
          Length = 116

 Score = 52.0 bits (26), Expect = 2e-06
 Identities = 26/26 (100%)
 Strand = Plus / Minus

                                     
Query: 11  atactccctccgtcccaaaataagtg 36
           ||||||||||||||||||||||||||
Sbjct: 113 atactccctccgtcccaaaataagtg 88



 Score = 44.1 bits (22), Expect = 4e-04
 Identities = 25/26 (96%)
 Strand = Plus / Plus

                                    
Query: 11 atactccctccgtcccaaaataagtg 36
          |||||||||| |||||||||||||||
Sbjct: 4  atactccctctgtcccaaaataagtg 29




>RF00906;MIR1122;AF521177.1/81577-81474 4513:Hordeum vulgare
          Length = 104

 Score = 52.0 bits (26), Expect = 2e-06
 Identities = 26/26 (100%)
 Strand = Plus / Minus

                                     
Query: 11  atactccctccgtcccaaaataagtg 36
           ||||||||||||||||||||||||||
Sbjct: 101 atactccctccgtcccaaaataagtg 76




>RF00906;MIR1122;AP003303.4/77673-77577 39947:Oryza sativa
          Japonica Group
          Length = 97

 Score = 52.0 bits (26), Expect = 2e-06
 Identities = 26/26 (100%)
 Strand = Plus / Plus

                                    
Query: 9  acatactccctccgtcccaaaataag 34
          ||||||||||||||||||||||||||
Sbjct: 2  acatactccctccgtcccaaaataag 27



 Score = 46.1 bits (23), Expect = 1e-04
 Identities = 23/23 (100%)
 Strand = Plus / Minus

                                 
Query: 12 tactccctccgtcccaaaataag 34
          |||||||||||||||||||||||
Sbjct: 93 tactccctccgtcccaaaataag 71




>RF01058;MIR806;AACV01004692.1/2655-2900 39947:Oryza sativa
          Japonica Group
          Length = 246

 Score = 50.1 bits (25), Expect = 7e-06
 Identities = 25/25 (100%)
 Strand = Plus / Plus

                                   
Query: 12 tactccctccgtcccaaaataagtg 36
          |||||||||||||||||||||||||
Sbjct: 2  tactccctccgtcccaaaataagtg 26




>RF01058;MIR806;AAAA02014927.1/5775-5532 39946:Oryza sativa Indica
          Group
          Length = 244

 Score = 50.1 bits (25), Expect = 7e-06
 Identities = 25/25 (100%)
 Strand = Plus / Plus

                                   
Query: 12 tactccctccgtcccaaaataagtg 36
          |||||||||||||||||||||||||
Sbjct: 2  tactccctccgtcccaaaataagtg 26




>RF01058;MIR806;AACV01000175.1/175-418 39947:Oryza sativa Japonica
          Group
          Length = 244

 Score = 50.1 bits (25), Expect = 7e-06
 Identities = 25/25 (100%)
 Strand = Plus / Plus

                                   
Query: 12 tactccctccgtcccaaaataagtg 36
          |||||||||||||||||||||||||
Sbjct: 2  tactccctccgtcccaaaataagtg 26



 Score = 44.1 bits (22), Expect = 4e-04
 Identities = 25/26 (96%)
 Strand = Plus / Minus

                                     
Query: 11  atactccctccgtcccaaaataagtg 36
           ||||| ||||||||||||||||||||
Sbjct: 244 atactacctccgtcccaaaataagtg 219




>RF01058;MIR806;AAAA02015465.1/824-1069 39946:Oryza sativa Indica
           Group
          Length = 246

 Score = 50.1 bits (25), Expect = 7e-06
 Identities = 25/25 (100%)
 Strand = Plus / Minus

                                    
Query: 12  tactccctccgtcccaaaataagtg 36
           |||||||||||||||||||||||||
Sbjct: 245 tactccctccgtcccaaaataagtg 221



 Score = 44.1 bits (22), Expect = 4e-04
 Identities = 25/26 (96%)
 Strand = Plus / Plus

                                    
Query: 11 atactccctccgtcccaaaataagtg 36
          ||||| ||||||||||||||||||||
Sbjct: 1  atactacctccgtcccaaaataagtg 26




>RF01058;MIR806;AP004279.1/119207-118967 39947:Oryza sativa Japonica
           Group
          Length = 241

 Score = 50.1 bits (25), Expect = 7e-06
 Identities = 25/25 (100%)
 Strand = Plus / Minus

                                    
Query: 12  tactccctccgtcccaaaataagtg 36
           |||||||||||||||||||||||||
Sbjct: 240 tactccctccgtcccaaaataagtg 216



 Score = 44.1 bits (22), Expect = 4e-04
 Identities = 25/26 (96%)
 Strand = Plus / Plus

                                    
Query: 11 atactccctccgtcccaaaataagtg 36
          ||||| ||||||||||||||||||||
Sbjct: 1  atacttcctccgtcccaaaataagtg 26




>RF01058;MIR806;AP008214.1/5532426-5532666 39947:Oryza sativa
           Japonica Group
          Length = 241

 Score = 50.1 bits (25), Expect = 7e-06
 Identities = 25/25 (100%)
 Strand = Plus / Minus

                                    
Query: 12  tactccctccgtcccaaaataagtg 36
           |||||||||||||||||||||||||
Sbjct: 240 tactccctccgtcccaaaataagtg 216



 Score = 44.1 bits (22), Expect = 4e-04
 Identities = 25/26 (96%)
 Strand = Plus / Plus

                                    
Query: 11 atactccctccgtcccaaaataagtg 36
          ||||| ||||||||||||||||||||
Sbjct: 1  atactacctccgtcccaaaataagtg 26




>RF01058;MIR806;AP004672.3/126730-126486 39947:Oryza sativa
          Japonica Group
          Length = 245

 Score = 50.1 bits (25), Expect = 7e-06
 Identities = 25/25 (100%)
 Strand = Plus / Plus

                                   
Query: 12 tactccctccgtcccaaaataagtg 36
          |||||||||||||||||||||||||
Sbjct: 2  tactccctccgtcccaaaataagtg 26




>RF01058;MIR806;AAAA02012959.1/2038-1794 39946:Oryza sativa Indica
          Group
          Length = 245

 Score = 50.1 bits (25), Expect = 7e-06
 Identities = 25/25 (100%)
 Strand = Plus / Plus

                                   
Query: 12 tactccctccgtcccaaaataagtg 36
          |||||||||||||||||||||||||
Sbjct: 2  tactccctccgtcccaaaataagtg 26




>RF01058;MIR806;AACV01005022.1/1990-2230 39947:Oryza sativa Japonica
           Group
          Length = 241

 Score = 50.1 bits (25), Expect = 7e-06
 Identities = 25/25 (100%)
 Strand = Plus / Minus

                                    
Query: 12  tactccctccgtcccaaaataagtg 36
           |||||||||||||||||||||||||
Sbjct: 240 tactccctccgtcccaaaataagtg 216




>RF01058;MIR806;AAAA02007955.1/54103-53859 39946:Oryza sativa
          Indica Group
          Length = 245

 Score = 50.1 bits (25), Expect = 7e-06
 Identities = 25/25 (100%)
 Strand = Plus / Plus

                                   
Query: 12 tactccctccgtcccaaaataagtg 36
          |||||||||||||||||||||||||
Sbjct: 2  tactccctccgtcccaaaataagtg 26



 Score = 44.1 bits (22), Expect = 4e-04
 Identities = 25/26 (96%)
 Strand = Plus / Minus

                                     
Query: 11  atactccctccgtcccaaaataagtg 36
           ||||| ||||||||||||||||||||
Sbjct: 245 atactacctccgtcccaaaataagtg 220




>RF00906;MIR1122;AB182945.1/6773-6906 4565:Triticum aestivum (bread
           wheat)
          Length = 134

 Score = 50.1 bits (25), Expect = 7e-06
 Identities = 28/29 (96%)
 Strand = Plus / Minus

                                        
Query: 11  atactccctccgtcccaaaataagtgtct 39
           ||||||||||||| |||||||||||||||
Sbjct: 131 atactccctccgttccaaaataagtgtct 103



 Score = 44.1 bits (22), Expect = 4e-04
 Identities = 25/26 (96%)
 Strand = Plus / Plus

                                    
Query: 15 tccctccgtcccaaaataagtgtctt 40
          ||||||||||||||||| ||||||||
Sbjct: 8  tccctccgtcccaaaatgagtgtctt 33




>RF00906;MIR1122;AJ507395.1/7785-7899 112509:Hordeum vulgare subsp.
           vulgare (domesticated barley)
          Length = 115

 Score = 50.1 bits (25), Expect = 7e-06
 Identities = 25/25 (100%)
 Strand = Plus / Minus

                                    
Query: 12  tactccctccgtcccaaaataagtg 36
           |||||||||||||||||||||||||
Sbjct: 111 tactccctccgtcccaaaataagtg 87




>RF00906;MIR1122;AK252095.1/1820-1925 112509:Hordeum vulgare subsp.
           vulgare (domesticated barley)
          Length = 106

 Score = 50.1 bits (25), Expect = 7e-06
 Identities = 28/29 (96%)
 Strand = Plus / Minus

                                        
Query: 10  catactccctccgtcccaaaataagtgtc 38
           ||||||||||| |||||||||||||||||
Sbjct: 104 catactccctctgtcccaaaataagtgtc 76




>RF00906;MIR1122;AF181455.1/3108-2994 4513:Hordeum vulgare
          Length = 115

 Score = 50.1 bits (25), Expect = 7e-06
 Identities = 25/25 (100%)
 Strand = Plus / Minus

                                    
Query: 12  tactccctccgtcccaaaataagtg 36
           |||||||||||||||||||||||||
Sbjct: 111 tactccctccgtcccaaaataagtg 87




>RF00906;MIR1122;AF525764.1/1593-1489 200361:Aegilops tauschii
           subsp. strangulata
          Length = 105

 Score = 50.1 bits (25), Expect = 7e-06
 Identities = 28/29 (96%)
 Strand = Plus / Minus

                                        
Query: 12  tactccctccgtcccaaaataagtgtctt 40
           |||||||||| ||||||||||||||||||
Sbjct: 101 tactccctccatcccaaaataagtgtctt 73



 Score = 44.1 bits (22), Expect = 4e-04
 Identities = 28/30 (93%)
 Strand = Plus / Plus

                                        
Query: 11 atactccctccgtcccaaaataagtgtctt 40
          ||||||||| ||||||||||||| ||||||
Sbjct: 4  atactccctacgtcccaaaataattgtctt 33




>RF00906;MIR1122;AAAA02028442.1/1248-1113 39946:Oryza sativa
          Indica Group
          Length = 136

 Score = 50.1 bits (25), Expect = 7e-06
 Identities = 25/25 (100%)
 Strand = Plus / Plus

                                   
Query: 9  acatactccctccgtcccaaaataa 33
          |||||||||||||||||||||||||
Sbjct: 2  acatactccctccgtcccaaaataa 26



 Score = 44.1 bits (22), Expect = 4e-04
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                 
Query: 12  tactccctccgtcccaaaataa 33
           ||||||||||||||||||||||
Sbjct: 132 tactccctccgtcccaaaataa 111




>RF00906;MIR1122;AAAA02018379.1/19319-19440 39946:Oryza sativa
           Indica Group
          Length = 122

 Score = 50.1 bits (25), Expect = 7e-06
 Identities = 25/25 (100%)
 Strand = Plus / Minus

                                    
Query: 9   acatactccctccgtcccaaaataa 33
           |||||||||||||||||||||||||
Sbjct: 121 acatactccctccgtcccaaaataa 97




>RF00906;MIR1122;AACV01020861.1/25006-25108 39947:Oryza sativa
          Japonica Group
          Length = 103

 Score = 50.1 bits (25), Expect = 7e-06
 Identities = 25/25 (100%)
 Strand = Plus / Plus

                                   
Query: 9  acatactccctccgtcccaaaataa 33
          |||||||||||||||||||||||||
Sbjct: 2  acatactccctccgtcccaaaataa 26



 Score = 44.1 bits (22), Expect = 4e-04
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                
Query: 12 tactccctccgtcccaaaataa 33
          ||||||||||||||||||||||
Sbjct: 99 tactccctccgtcccaaaataa 78




>RF00906;MIR1122;AP005421.3/127890-127779 39947:Oryza sativa
          Japonica Group
          Length = 112

 Score = 50.1 bits (25), Expect = 7e-06
 Identities = 25/25 (100%)
 Strand = Plus / Plus

                                   
Query: 8  cacatactccctccgtcccaaaata 32
          |||||||||||||||||||||||||
Sbjct: 1  cacatactccctccgtcccaaaata 25




>RF00906;MIR1122;AP008215.1/18970521-18970611 39947:Oryza sativa
          Japonica Group
          Length = 91

 Score = 50.1 bits (25), Expect = 7e-06
 Identities = 25/25 (100%)
 Strand = Plus / Plus

                                   
Query: 8  cacatactccctccgtcccaaaata 32
          |||||||||||||||||||||||||
Sbjct: 1  cacatactccctccgtcccaaaata 25




>RF01058;MIR806;AP008208.1/24144061-24144300 39947:Oryza sativa
          Japonica Group
          Length = 240

 Score = 48.1 bits (24), Expect = 3e-05
 Identities = 24/24 (100%)
 Strand = Plus / Plus

                                  
Query: 11 atactccctccgtcccaaaataag 34
          ||||||||||||||||||||||||
Sbjct: 1  atactccctccgtcccaaaataag 24




>RF01058;MIR806;AACV01004890.1/11000-11239 39947:Oryza sativa
           Japonica Group
          Length = 240

 Score = 48.1 bits (24), Expect = 3e-05
 Identities = 24/24 (100%)
 Strand = Plus / Minus

                                   
Query: 11  atactccctccgtcccaaaataag 34
           ||||||||||||||||||||||||
Sbjct: 240 atactccctccgtcccaaaataag 217




>RF00906;MIR1122;ABXC01006480.1/93142-93031 4558:Sorghum bicolor
          (sorghum)
          Length = 112

 Score = 48.1 bits (24), Expect = 3e-05
 Identities = 24/24 (100%)
 Strand = Plus / Plus

                                  
Query: 10 catactccctccgtcccaaaataa 33
          ||||||||||||||||||||||||
Sbjct: 3  catactccctccgtcccaaaataa 26




>RF00906;MIR1122;D30809.1/4836-4921 4565:Triticum aestivum (bread
          wheat)
          Length = 86

 Score = 48.1 bits (24), Expect = 3e-05
 Identities = 27/28 (96%)
 Strand = Plus / Minus

                                      
Query: 11 atactccctccgtcccaaaataagtgtc 38
          |||||||| |||||||||||||||||||
Sbjct: 83 atactcccaccgtcccaaaataagtgtc 56




>RF00906;MIR1122;CR626933.1/11895-11804 4571:Triticum turgidum
          Length = 92

 Score = 48.1 bits (24), Expect = 3e-05
 Identities = 24/24 (100%)
 Strand = Plus / Minus

                                  
Query: 17 cctccgtcccaaaataagtgtctt 40
          ||||||||||||||||||||||||
Sbjct: 85 cctccgtcccaaaataagtgtctt 62




>RF00906;MIR1122;DQ900687.1/24296-24401 112509:Hordeum vulgare
           subsp. vulgare (domesticated barley)
          Length = 106

 Score = 48.1 bits (24), Expect = 3e-05
 Identities = 27/28 (96%)
 Strand = Plus / Minus

                                       
Query: 11  atactccctccgtcccaaaataagtgtc 38
           ||||||||||||||| ||||||||||||
Sbjct: 103 atactccctccgtcctaaaataagtgtc 76




>RF00906;MIR1122;AJ234583.1/157-260 4513:Hordeum vulgare
          Length = 104

 Score = 48.1 bits (24), Expect = 3e-05
 Identities = 30/32 (93%)
 Strand = Plus / Plus

                                          
Query: 11 atactccctccgtcccaaaataagtgtcttaa 42
          |||||||||||||| |||||||||| ||||||
Sbjct: 4  atactccctccgtctcaaaataagtttcttaa 35



 Score = 46.1 bits (23), Expect = 1e-04
 Identities = 29/31 (93%)
 Strand = Plus / Plus

                                          
Query: 78  ttgagacagttattttgagacggaggaagta 108
           |||||||| ||||||||||||||||| ||||
Sbjct: 70  ttgagacaattattttgagacggagggagta 100




>RF00906;MIR1122;EU282656.1/645-750 112509:Hordeum vulgare subsp.
           vulgare (domesticated barley)
          Length = 106

 Score = 48.1 bits (24), Expect = 3e-05
 Identities = 30/32 (93%)
 Strand = Plus / Minus

                                           
Query: 12  tactccctccgtcccaaaataagtgtcttaaa 43
           ||||||||| ||||||||||||||||| ||||
Sbjct: 102 tactccctcggtcccaaaataagtgtcgtaaa 71




>RF00906;MIR1122;AP008216.1/15579713-15579809 39947:Oryza sativa
          Japonica Group
          Length = 97

 Score = 48.1 bits (24), Expect = 3e-05
 Identities = 24/24 (100%)
 Strand = Plus / Plus

                                  
Query: 12 tactccctccgtcccaaaataagt 35
          ||||||||||||||||||||||||
Sbjct: 5  tactccctccgtcccaaaataagt 28




>RF00906;MIR1122;AACV01001981.1/7100-7193 39947:Oryza sativa
          Japonica Group
          Length = 94

 Score = 48.1 bits (24), Expect = 3e-05
 Identities = 24/24 (100%)
 Strand = Plus / Plus

                                  
Query: 10 catactccctccgtcccaaaataa 33
          ||||||||||||||||||||||||
Sbjct: 3  catactccctccgtcccaaaataa 26




>RF01058;MIR806;AACV01020112.1/46634-46870 39947:Oryza sativa
          Japonica Group
          Length = 237

 Score = 46.1 bits (23), Expect = 1e-04
 Identities = 23/23 (100%)
 Strand = Plus / Plus

                                 
Query: 12 tactccctccgtcccaaaataag 34
          |||||||||||||||||||||||
Sbjct: 2  tactccctccgtcccaaaataag 24



 Score = 44.1 bits (22), Expect = 4e-04
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                 
Query: 12  tactccctccgtcccaaaataa 33
           ||||||||||||||||||||||
Sbjct: 236 tactccctccgtcccaaaataa 215




>RF00906;MIR1122;CR954190.2/110040-110176 3880:Medicago truncatula
          (barrel medic)
          Length = 137

 Score = 46.1 bits (23), Expect = 1e-04
 Identities = 23/23 (100%)
 Strand = Plus / Plus

                                 
Query: 9  acatactccctccgtcccaaaat 31
          |||||||||||||||||||||||
Sbjct: 2  acatactccctccgtcccaaaat 24




>RF00906;MIR1122;EF560592.1/17009-17118 4567:Triticum turgidum
           subsp. durum (durum wheat)
          Length = 110

 Score = 46.1 bits (23), Expect = 1e-04
 Identities = 26/27 (96%)
 Strand = Plus / Minus

                                      
Query: 12  tactccctccgtcccaaaataagtgtc 38
           |||| ||||||||||||||||||||||
Sbjct: 106 tactacctccgtcccaaaataagtgtc 80




>RF00906;MIR1122;AF325197.1/3732-3639 4565:Triticum aestivum (bread
           wheat)
          Length = 94

 Score = 46.1 bits (23), Expect = 1e-04
 Identities = 35/39 (89%)
 Strand = Plus / Plus

                                                  
Query: 73  caaagttgagacagttattttgagacggaggaagtataa 111
           |||||||||| ||  |||||||| |||||||||||||||
Sbjct: 55  caaagttgagtcatctattttgaaacggaggaagtataa 93




>RF00906;MIR1122;AF521177.1/27342-27466 4513:Hordeum vulgare
          Length = 125

 Score = 46.1 bits (23), Expect = 1e-04
 Identities = 23/23 (100%)
 Strand = Plus / Minus

                                  
Query: 10  catactccctccgtcccaaaata 32
           |||||||||||||||||||||||
Sbjct: 123 catactccctccgtcccaaaata 101




>RF00906;MIR1122;AAAA02035140.1/47005-46870 39946:Oryza sativa
          Indica Group
          Length = 136

 Score = 46.1 bits (23), Expect = 1e-04
 Identities = 23/23 (100%)
 Strand = Plus / Plus

                                 
Query: 8  cacatactccctccgtcccaaaa 30
          |||||||||||||||||||||||
Sbjct: 1  cacatactccctccgtcccaaaa 23




>RF00906;MIR1122;AAAA02000966.1/612-453 39946:Oryza sativa Indica
          Group
          Length = 160

 Score = 46.1 bits (23), Expect = 1e-04
 Identities = 23/23 (100%)
 Strand = Plus / Plus

                                 
Query: 11 atactccctccgtcccaaaataa 33
          |||||||||||||||||||||||
Sbjct: 4  atactccctccgtcccaaaataa 26



 Score = 44.1 bits (22), Expect = 4e-04
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                 
Query: 12  tactccctccgtcccaaaataa 33
           ||||||||||||||||||||||
Sbjct: 156 tactccctccgtcccaaaataa 135




>RF00906;MIR1122;AC215820.3/114332-114188 4537:Oryza punctata
          Length = 145

 Score = 46.1 bits (23), Expect = 1e-04
 Identities = 23/23 (100%)
 Strand = Plus / Plus

                                 
Query: 10 catactccctccgtcccaaaata 32
          |||||||||||||||||||||||
Sbjct: 3  catactccctccgtcccaaaata 25




>RF00906;MIR1122;AC109595.2/23288-23368 39947:Oryza sativa
          Japonica Group
          Length = 81

 Score = 46.1 bits (23), Expect = 1e-04
 Identities = 23/23 (100%)
 Strand = Plus / Minus

                                 
Query: 8  cacatactccctccgtcccaaaa 30
          |||||||||||||||||||||||
Sbjct: 81 cacatactccctccgtcccaaaa 59




>RF00906;MIR1122;AC128646.5/47101-47248 39947:Oryza sativa
          Japonica Group
          Length = 148

 Score = 46.1 bits (23), Expect = 1e-04
 Identities = 23/23 (100%)
 Strand = Plus / Plus

                                 
Query: 8  cacatactccctccgtcccaaaa 30
          |||||||||||||||||||||||
Sbjct: 1  cacatactccctccgtcccaaaa 23




>RF00906;MIR1122;AAAA02019483.1/16379-16491 39946:Oryza sativa
           Indica Group
          Length = 113

 Score = 46.1 bits (23), Expect = 1e-04
 Identities = 23/23 (100%)
 Strand = Plus / Minus

                                  
Query: 11  atactccctccgtcccaaaataa 33
           |||||||||||||||||||||||
Sbjct: 110 atactccctccgtcccaaaataa 88




>RF00906;MIR1122;AAAA02018626.1/12551-12423 39946:Oryza sativa
           Indica Group
          Length = 129

 Score = 46.1 bits (23), Expect = 1e-04
 Identities = 23/23 (100%)
 Strand = Plus / Minus

                                  
Query: 11  atactccctccgtcccaaaataa 33
           |||||||||||||||||||||||
Sbjct: 126 atactccctccgtcccaaaataa 104




>RF00906;MIR1122;AP008218.1/1449043-1448953 39947:Oryza sativa
          Japonica Group
          Length = 91

 Score = 46.1 bits (23), Expect = 1e-04
 Identities = 23/23 (100%)
 Strand = Plus / Plus

                                 
Query: 8  cacatactccctccgtcccaaaa 30
          |||||||||||||||||||||||
Sbjct: 1  cacatactccctccgtcccaaaa 23




>RF00906;MIR1122;AC121366.4/55476-55582 39947:Oryza sativa
          Japonica Group
          Length = 107

 Score = 46.1 bits (23), Expect = 1e-04
 Identities = 23/23 (100%)
 Strand = Plus / Plus

                                 
Query: 10 catactccctccgtcccaaaata 32
          |||||||||||||||||||||||
Sbjct: 3  catactccctccgtcccaaaata 25




>RF01058;MIR806;AAAA02002634.1/48844-49087 39946:Oryza sativa
          Indica Group
          Length = 244

 Score = 44.1 bits (22), Expect = 4e-04
 Identities = 25/26 (96%)
 Strand = Plus / Plus

                                    
Query: 11 atactccctccgtcccaaaataagtg 36
          ||||||| ||||||||||||||||||
Sbjct: 1  atactccatccgtcccaaaataagtg 26




>RF01058;MIR806;AC137621.2/17491-17729 39947:Oryza sativa Japonica
          Group
          Length = 239

 Score = 44.1 bits (22), Expect = 4e-04
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                
Query: 11 atactccctccgtcccaaaata 32
          ||||||||||||||||||||||
Sbjct: 1  atactccctccgtcccaaaata 22




>RF01058;MIR806;AP008218.1/7228032-7227791 39947:Oryza sativa
          Japonica Group
          Length = 242

 Score = 44.1 bits (22), Expect = 4e-04
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                
Query: 11 atactccctccgtcccaaaata 32
          ||||||||||||||||||||||
Sbjct: 1  atactccctccgtcccaaaata 22




>RF01058;MIR806;AACV01010423.1/14473-14229 39947:Oryza sativa
          Japonica Group
          Length = 245

 Score = 44.1 bits (22), Expect = 4e-04
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                
Query: 11 atactccctccgtcccaaaata 32
          ||||||||||||||||||||||
Sbjct: 1  atactccctccgtcccaaaata 22




>RF00906;MIR1122;AY491681.1/77211-77302 4568:Triticum monococcum
          Length = 92

 Score = 44.1 bits (22), Expect = 4e-04
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                
Query: 11 atactccctccgtcccaaaata 32
          ||||||||||||||||||||||
Sbjct: 89 atactccctccgtcccaaaata 68




>RF00906;MIR1122;AY235466.1/780-656 4565:Triticum aestivum (bread
           wheat)
          Length = 125

 Score = 44.1 bits (22), Expect = 4e-04
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                 
Query: 11  atactccctccgtcccaaaata 32
           ||||||||||||||||||||||
Sbjct: 122 atactccctccgtcccaaaata 101




>RF00906;MIR1122;AY235464.1/714-838 4565:Triticum aestivum (bread
          wheat)
          Length = 125

 Score = 44.1 bits (22), Expect = 4e-04
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                
Query: 11 atactccctccgtcccaaaata 32
          ||||||||||||||||||||||
Sbjct: 4  atactccctccgtcccaaaata 25




>RF00906;MIR1122;AF427791.1/222786-222921 4513:Hordeum vulgare
          Length = 136

 Score = 44.1 bits (22), Expect = 4e-04
 Identities = 28/30 (93%)
 Strand = Plus / Plus

                                        
Query: 12 tactccctccgtcccaaaataagtgtctta 41
          |||||||||||||||||||| | |||||||
Sbjct: 5  tactccctccgtcccaaaattattgtctta 34




>RF00906;MIR1122;FJ477093.1/40908-41001 4513:Hordeum vulgare
          Length = 94

 Score = 44.1 bits (22), Expect = 4e-04
 Identities = 25/26 (96%)
 Strand = Plus / Plus

                                    
Query: 11 atactccctccgtcccaaaataagtg 36
          |||||||||| |||||||||||||||
Sbjct: 4  atactccctctgtcccaaaataagtg 29




>RF00906;MIR1122;EF059989.1/24895-24770 29664:Brachypodium
          sylvaticum
          Length = 126

 Score = 44.1 bits (22), Expect = 4e-04
 Identities = 25/26 (96%)
 Strand = Plus / Plus

                                    
Query: 11 atactccctccgtcccaaaataagtg 36
          ||||||||||||||||||| ||||||
Sbjct: 4  atactccctccgtcccaaattaagtg 29




>RF00906;MIR1122;EU730899.1/86003-86096 15368:Brachypodium
          distachyon
          Length = 94

 Score = 44.1 bits (22), Expect = 4e-04
 Identities = 25/26 (96%)
 Strand = Plus / Minus

                                    
Query: 11 atactccctccgtcccaaaataagtg 36
          |||| |||||||||||||||||||||
Sbjct: 91 ataccccctccgtcccaaaataagtg 66




>RF00906;MIR1122;AAAA02029963.1/5445-5312 39946:Oryza sativa Indica
           Group
          Length = 134

 Score = 44.1 bits (22), Expect = 4e-04
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                 
Query: 11  atactccctccgtcccaaaata 32
           ||||||||||||||||||||||
Sbjct: 131 atactccctccgtcccaaaata 110




>RF00906;MIR1122;AAAA02034555.1/16647-16527 39946:Oryza sativa
          Indica Group
          Length = 121

 Score = 44.1 bits (22), Expect = 4e-04
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                
Query: 11 atactccctccgtcccaaaata 32
          ||||||||||||||||||||||
Sbjct: 37 atactccctccgtcccaaaata 58




>RF00906;MIR1122;AAAA02004035.1/49440-49310 39946:Oryza sativa
           Indica Group
          Length = 131

 Score = 44.1 bits (22), Expect = 4e-04
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                 
Query: 11  atactccctccgtcccaaaata 32
           ||||||||||||||||||||||
Sbjct: 128 atactccctccgtcccaaaata 107




>RF00906;MIR1122;AAAA02025635.1/7223-7330 39946:Oryza sativa
          Indica Group
          Length = 108

 Score = 44.1 bits (22), Expect = 4e-04
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                
Query: 11 atactccctccgtcccaaaata 32
          ||||||||||||||||||||||
Sbjct: 4  atactccctccgtcccaaaata 25




>RF00906;MIR1122;ABRL01001045.1/1775-1911 65489:Oryza barthii
          Length = 137

 Score = 44.1 bits (22), Expect = 4e-04
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                
Query: 9  acatactccctccgtcccaaaa 30
          ||||||||||||||||||||||
Sbjct: 2  acatactccctccgtcccaaaa 23




>RF00906;MIR1122;AAAA02022195.1/27114-27226 39946:Oryza sativa
           Indica Group
          Length = 113

 Score = 44.1 bits (22), Expect = 4e-04
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                 
Query: 12  tactccctccgtcccaaaataa 33
           ||||||||||||||||||||||
Sbjct: 109 tactccctccgtcccaaaataa 88




>RF00906;MIR1122;AACV01004030.1/351-512 39947:Oryza sativa Japonica
           Group
          Length = 162

 Score = 44.1 bits (22), Expect = 4e-04
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                 
Query: 11  atactccctccgtcccaaaata 32
           ||||||||||||||||||||||
Sbjct: 159 atactccctccgtcccaaaata 138




>RF00906;MIR1122;AAAA02007259.1/4313-4455 39946:Oryza sativa
          Indica Group
          Length = 143

 Score = 44.1 bits (22), Expect = 4e-04
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                
Query: 11 atactccctccgtcccaaaata 32
          ||||||||||||||||||||||
Sbjct: 4  atactccctccgtcccaaaata 25




>RF00906;MIR1122;AAAA02026282.1/2845-2975 39946:Oryza sativa
          Indica Group
          Length = 131

 Score = 44.1 bits (22), Expect = 4e-04
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                
Query: 11 atactccctccgtcccaaaata 32
          ||||||||||||||||||||||
Sbjct: 4  atactccctccgtcccaaaata 25




>RF00906;MIR1122;AAAA02003593.1/26423-26497 39946:Oryza sativa
          Indica Group
          Length = 75

 Score = 44.1 bits (22), Expect = 4e-04
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                
Query: 11 atactccctccgtcccaaaata 32
          ||||||||||||||||||||||
Sbjct: 72 atactccctccgtcccaaaata 51




>RF00906;MIR1122;AAAA02008343.1/9662-9526 39946:Oryza sativa
          Indica Group
          Length = 137

 Score = 44.1 bits (22), Expect = 4e-04
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                
Query: 9  acatactccctccgtcccaaaa 30
          ||||||||||||||||||||||
Sbjct: 2  acatactccctccgtcccaaaa 23




>RF00906;MIR1122;FJ581044.1/175385-175266 4538:Oryza glaberrima
          (African rice)
          Length = 120

 Score = 44.1 bits (22), Expect = 4e-04
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                
Query: 12 tactccctccgtcccaaaataa 33
          ||||||||||||||||||||||
Sbjct: 5  tactccctccgtcccaaaataa 26




>RF00906;MIR1122;AC111016.2/25572-25452 39947:Oryza sativa Japonica
           Group
          Length = 121

 Score = 44.1 bits (22), Expect = 4e-04
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                 
Query: 11  atactccctccgtcccaaaata 32
           ||||||||||||||||||||||
Sbjct: 118 atactccctccgtcccaaaata 97




>RF00906;MIR1122;AAAA02022585.1/6052-5955 39946:Oryza sativa
          Indica Group
          Length = 98

 Score = 44.1 bits (22), Expect = 4e-04
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                
Query: 9  acatactccctccgtcccaaaa 30
          ||||||||||||||||||||||
Sbjct: 97 acatactccctccgtcccaaaa 76




>RF00906;MIR1122;AAAA02004642.1/60119-60040 39946:Oryza sativa
          Indica Group
          Length = 80

 Score = 44.1 bits (22), Expect = 4e-04
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                
Query: 9  acatactccctccgtcccaaaa 30
          ||||||||||||||||||||||
Sbjct: 2  acatactccctccgtcccaaaa 23




>RF00906;MIR1122;AP004047.3/87830-87972 39947:Oryza sativa
          Japonica Group
          Length = 143

 Score = 44.1 bits (22), Expect = 4e-04
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                
Query: 11 atactccctccgtcccaaaata 32
          ||||||||||||||||||||||
Sbjct: 4  atactccctccgtcccaaaata 25




>RF00906;MIR1122;AACV01024885.1/21195-21061 39947:Oryza sativa
          Japonica Group
          Length = 135

 Score = 44.1 bits (22), Expect = 4e-04
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                
Query: 11 atactccctccgtcccaaaata 32
          ||||||||||||||||||||||
Sbjct: 4  atactccctccgtcccaaaata 25




>RF00906;MIR1122;AC232160.1/3827-3951 63629:Oryza minuta
          Length = 125

 Score = 44.1 bits (22), Expect = 4e-04
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                
Query: 11 atactccctccgtcccaaaata 32
          ||||||||||||||||||||||
Sbjct: 4  atactccctccgtcccaaaata 25




>RF00906;MIR1122;AAAA02020504.1/20392-20526 39946:Oryza sativa
           Indica Group
          Length = 135

 Score = 44.1 bits (22), Expect = 4e-04
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                 
Query: 11  atactccctccgtcccaaaata 32
           ||||||||||||||||||||||
Sbjct: 132 atactccctccgtcccaaaata 111




>RF00906;MIR1122;AC226266.1/92361-92224 63629:Oryza minuta
          Length = 138

 Score = 44.1 bits (22), Expect = 4e-04
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                 
Query: 11  atactccctccgtcccaaaata 32
           ||||||||||||||||||||||
Sbjct: 135 atactccctccgtcccaaaata 114




>RF00906;MIR1122;AP008216.1/16569819-16569686 39947:Oryza sativa
           Japonica Group
          Length = 134

 Score = 44.1 bits (22), Expect = 4e-04
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                 
Query: 11  atactccctccgtcccaaaata 32
           ||||||||||||||||||||||
Sbjct: 131 atactccctccgtcccaaaata 110




>RF00906;MIR1122;AAAA02033927.1/2539-2391 39946:Oryza sativa Indica
           Group
          Length = 149

 Score = 44.1 bits (22), Expect = 4e-04
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                 
Query: 11  atactccctccgtcccaaaata 32
           ||||||||||||||||||||||
Sbjct: 146 atactccctccgtcccaaaata 125




>RF00906;MIR1122;AAAA02026694.1/32137-32261 39946:Oryza sativa
           Indica Group
          Length = 125

 Score = 44.1 bits (22), Expect = 4e-04
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                 
Query: 11  atactccctccgtcccaaaata 32
           ||||||||||||||||||||||
Sbjct: 122 atactccctccgtcccaaaata 101




>RF00906;MIR1122;AP008218.1/2340117-2339983 39947:Oryza sativa
          Japonica Group
          Length = 135

 Score = 44.1 bits (22), Expect = 4e-04
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                
Query: 11 atactccctccgtcccaaaata 32
          ||||||||||||||||||||||
Sbjct: 4  atactccctccgtcccaaaata 25




>RF00906;MIR1122;AL831801.4/77594-77709 4530:Oryza sativa (rice)
          Length = 116

 Score = 44.1 bits (22), Expect = 4e-04
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                 
Query: 11  atactccctccgtcccaaaata 32
           ||||||||||||||||||||||
Sbjct: 113 atactccctccgtcccaaaata 92




>RF00906;MIR1122;AC210491.1/95749-95858 4538:Oryza glaberrima
           (African rice)
          Length = 110

 Score = 44.1 bits (22), Expect = 4e-04
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                 
Query: 11  atactccctccgtcccaaaata 32
           ||||||||||||||||||||||
Sbjct: 107 atactccctccgtcccaaaata 86




>RF00906;MIR1122;AP008212.1/25859487-25859353 39947:Oryza sativa
           Japonica Group
          Length = 135

 Score = 44.1 bits (22), Expect = 4e-04
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                 
Query: 11  atactccctccgtcccaaaata 32
           ||||||||||||||||||||||
Sbjct: 132 atactccctccgtcccaaaata 111




>RF00906;MIR1122;AAAA02007975.1/29302-29380 39946:Oryza sativa
          Indica Group
          Length = 79

 Score = 44.1 bits (22), Expect = 4e-04
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                
Query: 11 atactccctccgtcccaaaata 32
          ||||||||||||||||||||||
Sbjct: 4  atactccctccgtcccaaaata 25




>RF00906;MIR1122;AACV01003595.1/38638-38749 39947:Oryza sativa
           Japonica Group
          Length = 112

 Score = 44.1 bits (22), Expect = 4e-04
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                 
Query: 11  atactccctccgtcccaaaata 32
           ||||||||||||||||||||||
Sbjct: 109 atactccctccgtcccaaaata 88




>RF00906;MIR1122;AAAA02017235.1/6057-5946 39946:Oryza sativa
          Indica Group
          Length = 112

 Score = 44.1 bits (22), Expect = 4e-04
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                
Query: 11 atactccctccgtcccaaaata 32
          ||||||||||||||||||||||
Sbjct: 4  atactccctccgtcccaaaata 25




>RF00906;MIR1122;AC137999.2/12932-12822 39947:Oryza sativa
          Japonica Group
          Length = 111

 Score = 44.1 bits (22), Expect = 4e-04
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                
Query: 11 atactccctccgtcccaaaata 32
          ||||||||||||||||||||||
Sbjct: 4  atactccctccgtcccaaaata 25




>RF00906;MIR1122;AP008208.1/1166338-1166449 39947:Oryza sativa
           Japonica Group
          Length = 112

 Score = 44.1 bits (22), Expect = 4e-04
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                 
Query: 11  atactccctccgtcccaaaata 32
           ||||||||||||||||||||||
Sbjct: 109 atactccctccgtcccaaaata 88




>RF00906;MIR1122;AP003280.2/146720-146590 39947:Oryza sativa
           Japonica Group
          Length = 131

 Score = 44.1 bits (22), Expect = 4e-04
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                 
Query: 11  atactccctccgtcccaaaata 32
           ||||||||||||||||||||||
Sbjct: 128 atactccctccgtcccaaaata 107




>RF00906;MIR1122;AACV01014374.1/13115-13004 39947:Oryza sativa
           Japonica Group
          Length = 112

 Score = 44.1 bits (22), Expect = 4e-04
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                 
Query: 11  atactccctccgtcccaaaata 32
           ||||||||||||||||||||||
Sbjct: 109 atactccctccgtcccaaaata 88




>RF00906;MIR1122;AACV01023551.1/12075-12186 39947:Oryza sativa
          Japonica Group
          Length = 112

 Score = 44.1 bits (22), Expect = 4e-04
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                
Query: 11 atactccctccgtcccaaaata 32
          ||||||||||||||||||||||
Sbjct: 4  atactccctccgtcccaaaata 25




>RF00906;MIR1122;AP003760.4/5605-5476 39947:Oryza sativa Japonica
           Group
          Length = 130

 Score = 44.1 bits (22), Expect = 4e-04
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                 
Query: 11  atactccctccgtcccaaaata 32
           ||||||||||||||||||||||
Sbjct: 127 atactccctccgtcccaaaata 106




>RF00906;MIR1122;AK288546.1/1340-1246 39947:Oryza sativa Japonica
          Group
          Length = 95

 Score = 44.1 bits (22), Expect = 4e-04
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                
Query: 11 atactccctccgtcccaaaata 32
          ||||||||||||||||||||||
Sbjct: 92 atactccctccgtcccaaaata 71




>RF00906;MIR1122;AACV01009606.1/13757-13637 39947:Oryza sativa
          Japonica Group
          Length = 121

 Score = 44.1 bits (22), Expect = 4e-04
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                
Query: 12 tactccctccgtcccaaaataa 33
          ||||||||||||||||||||||
Sbjct: 5  tactccctccgtcccaaaataa 26




>RF00906;MIR1122;AAAA02028034.1/27580-27414 39946:Oryza sativa
           Indica Group
          Length = 167

 Score = 44.1 bits (22), Expect = 4e-04
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                 
Query: 11  atactccctccgtcccaaaata 32
           ||||||||||||||||||||||
Sbjct: 164 atactccctccgtcccaaaata 143




>RF00906;MIR1122;AAAA02004295.1/15025-15180 39946:Oryza sativa
           Indica Group
          Length = 156

 Score = 44.1 bits (22), Expect = 4e-04
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                 
Query: 11  atactccctccgtcccaaaata 32
           ||||||||||||||||||||||
Sbjct: 153 atactccctccgtcccaaaata 132




>RF00906;MIR1122;AAAA02006274.1/23456-23551 39946:Oryza sativa
          Indica Group
          Length = 96

 Score = 44.1 bits (22), Expect = 4e-04
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                
Query: 11 atactccctccgtcccaaaata 32
          ||||||||||||||||||||||
Sbjct: 93 atactccctccgtcccaaaata 72




>RF00906;MIR1122;AC229754.2/94242-94126 63629:Oryza minuta
          Length = 117

 Score = 44.1 bits (22), Expect = 4e-04
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                 
Query: 12  tactccctccgtcccaaaataa 33
           ||||||||||||||||||||||
Sbjct: 113 tactccctccgtcccaaaataa 92




>RF00906;MIR1122;AP008207.1/22739295-22739406 39947:Oryza sativa
           Japonica Group
          Length = 112

 Score = 44.1 bits (22), Expect = 4e-04
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                 
Query: 11  atactccctccgtcccaaaata 32
           ||||||||||||||||||||||
Sbjct: 109 atactccctccgtcccaaaata 88




>RF00906;MIR1122;AC079357.3/127350-127255 39947:Oryza sativa
          Japonica Group
          Length = 96

 Score = 44.1 bits (22), Expect = 4e-04
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                
Query: 11 atactccctccgtcccaaaata 32
          ||||||||||||||||||||||
Sbjct: 93 atactccctccgtcccaaaata 72




>RF00906;MIR1122;AACV01024869.1/7310-7232 39947:Oryza sativa
          Japonica Group
          Length = 79

 Score = 44.1 bits (22), Expect = 4e-04
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                
Query: 11 atactccctccgtcccaaaata 32
          ||||||||||||||||||||||
Sbjct: 76 atactccctccgtcccaaaata 55




>RF00906;MIR1122;AP003883.3/40264-40104 39947:Oryza sativa
          Japonica Group
          Length = 161

 Score = 44.1 bits (22), Expect = 4e-04
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                
Query: 11 atactccctccgtcccaaaata 32
          ||||||||||||||||||||||
Sbjct: 4  atactccctccgtcccaaaata 25




>RF00906;MIR1122;AP005802.3/90428-90511 39947:Oryza sativa
          Japonica Group
          Length = 84

 Score = 44.1 bits (22), Expect = 4e-04
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                
Query: 9  acatactccctccgtcccaaaa 30
          ||||||||||||||||||||||
Sbjct: 83 acatactccctccgtcccaaaa 62




>RF00906;MIR1122;AP008215.1/19940245-19940356 39947:Oryza sativa
           Japonica Group
          Length = 112

 Score = 44.1 bits (22), Expect = 4e-04
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                 
Query: 11  atactccctccgtcccaaaata 32
           ||||||||||||||||||||||
Sbjct: 109 atactccctccgtcccaaaata 88




>RF00906;MIR1122;AL831796.5/20323-20408 4530:Oryza sativa (rice)
          Length = 86

 Score = 44.1 bits (22), Expect = 4e-04
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                
Query: 11 atactccctccgtcccaaaata 32
          ||||||||||||||||||||||
Sbjct: 83 atactccctccgtcccaaaata 62




>RF00906;MIR1122;AC226706.2/62906-62750 63629:Oryza minuta
          Length = 157

 Score = 44.1 bits (22), Expect = 4e-04
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                 
Query: 11  atactccctccgtcccaaaata 32
           ||||||||||||||||||||||
Sbjct: 154 atactccctccgtcccaaaata 133




>RF00906;MIR1122;AACV01013954.1/10702-10856 39947:Oryza sativa
          Japonica Group
          Length = 155

 Score = 44.1 bits (22), Expect = 4e-04
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                
Query: 11 atactccctccgtcccaaaata 32
          ||||||||||||||||||||||
Sbjct: 4  atactccctccgtcccaaaata 25




>RF00906;MIR1122;AP003381.3/77030-76947 39947:Oryza sativa
          Japonica Group
          Length = 84

 Score = 44.1 bits (22), Expect = 4e-04
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                
Query: 11 atactccctccgtcccaaaata 32
          ||||||||||||||||||||||
Sbjct: 4  atactccctccgtcccaaaata 25




>RF00906;MIR1122;AP008212.1/6831401-6831305 39947:Oryza sativa
          Japonica Group
          Length = 97

 Score = 44.1 bits (22), Expect = 4e-04
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                
Query: 12 tactccctccgtcccaaaataa 33
          ||||||||||||||||||||||
Sbjct: 93 tactccctccgtcccaaaataa 72




>RF00906;MIR1122;AY947286.1/128-10 4530:Oryza sativa (rice)
          Length = 119

 Score = 44.1 bits (22), Expect = 4e-04
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                
Query: 11 atactccctccgtcccaaaata 32
          ||||||||||||||||||||||
Sbjct: 4  atactccctccgtcccaaaata 25




>RF00906;MIR1122;AC093953.2/44822-44955 39947:Oryza sativa Japonica
           Group
          Length = 134

 Score = 44.1 bits (22), Expect = 4e-04
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                 
Query: 11  atactccctccgtcccaaaata 32
           ||||||||||||||||||||||
Sbjct: 131 atactccctccgtcccaaaata 110




>RF00906;MIR1122;AACV01001520.1/25871-25960 39947:Oryza sativa
          Japonica Group
          Length = 90

 Score = 44.1 bits (22), Expect = 4e-04
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                
Query: 12 tactccctccgtcccaaaataa 33
          ||||||||||||||||||||||
Sbjct: 5  tactccctccgtcccaaaataa 26




>RF00906;MIR1122;AAAA02007660.1/3740-3838 39946:Oryza sativa
          Indica Group
          Length = 99

 Score = 44.1 bits (22), Expect = 4e-04
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                
Query: 11 atactccctccgtcccaaaata 32
          ||||||||||||||||||||||
Sbjct: 4  atactccctccgtcccaaaata 25



 Score = 44.1 bits (22), Expect = 4e-04
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                
Query: 11 atactccctccgtcccaaaata 32
          ||||||||||||||||||||||
Sbjct: 96 atactccctccgtcccaaaata 75




>RF00906;MIR1122;AK288180.1/1387-1262 39947:Oryza sativa Japonica
           Group
          Length = 126

 Score = 44.1 bits (22), Expect = 4e-04
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                 
Query: 11  atactccctccgtcccaaaata 32
           ||||||||||||||||||||||
Sbjct: 123 atactccctccgtcccaaaata 102




>RF00906;MIR1122;AAAA02006222.1/38105-37993 39946:Oryza sativa
          Indica Group
          Length = 113

 Score = 44.1 bits (22), Expect = 4e-04
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                
Query: 12 tactccctccgtcccaaaataa 33
          ||||||||||||||||||||||
Sbjct: 5  tactccctccgtcccaaaataa 26




>RF00906;MIR1122;AP008207.1/24395058-24395107 39947:Oryza sativa
          Japonica Group
          Length = 50

 Score = 44.1 bits (22), Expect = 4e-04
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                
Query: 11 atactccctccgtcccaaaata 32
          ||||||||||||||||||||||
Sbjct: 47 atactccctccgtcccaaaata 26




>RF00906;MIR1122;AP003412.4/28754-28834 39947:Oryza sativa
          Japonica Group
          Length = 81

 Score = 44.1 bits (22), Expect = 4e-04
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                
Query: 9  acatactccctccgtcccaaaa 30
          ||||||||||||||||||||||
Sbjct: 2  acatactccctccgtcccaaaa 23




>RF00906;MIR1122;AP008215.1/21144119-21144034 39947:Oryza sativa
          Japonica Group
          Length = 86

 Score = 44.1 bits (22), Expect = 4e-04
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                
Query: 11 atactccctccgtcccaaaata 32
          ||||||||||||||||||||||
Sbjct: 4  atactccctccgtcccaaaata 25