miRNEST 2.0: an integrative microRNA resource miRNEST 2.0, an integrative microRNA resource :: BLAST


>54697_tae-miR1122:pmrd
          Length = 295

 Score = 48.1 bits (24), Expect = 1e-06
 Identities = 30/32 (93%)
 Strand = Plus / Minus

                                           
Query: 6   atactccctccgtcccaaaataattgtcttag 37
           |||||||||||||||||||||  |||||||||
Sbjct: 152 atactccctccgtcccaaaattcttgtcttag 121



 Score = 42.1 bits (21), Expect = 8e-05
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                               
Query: 5  aatactccctccgtcccaaaa 25
          |||||||||||||||||||||
Sbjct: 23 aatactccctccgtcccaaaa 43




>49517_osa-miRf10302-akr:pmrd
          Length = 103

 Score = 46.1 bits (23), Expect = 5e-06
 Identities = 23/23 (100%)
 Strand = Plus / Plus

                                 
Query: 5  aatactccctccgtcccaaaata 27
          |||||||||||||||||||||||
Sbjct: 5  aatactccctccgtcccaaaata 27



 Score = 44.1 bits (22), Expect = 2e-05
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                
Query: 6  atactccctccgtcccaaaata 27
          ||||||||||||||||||||||
Sbjct: 98 atactccctccgtcccaaaata 77




>49156_osa-miR1862e:pmrd
          Length = 93

 Score = 46.1 bits (23), Expect = 5e-06
 Identities = 23/23 (100%)
 Strand = Plus / Minus

                                 
Query: 6  atactccctccgtcccaaaataa 28
          |||||||||||||||||||||||
Sbjct: 92 atactccctccgtcccaaaataa 70




>49155_osa-miR1862d:pmrd
          Length = 150

 Score = 46.1 bits (23), Expect = 5e-06
 Identities = 23/23 (100%)
 Strand = Plus / Minus

                                  
Query: 6   atactccctccgtcccaaaataa 28
           |||||||||||||||||||||||
Sbjct: 123 atactccctccgtcccaaaataa 101




>49152_osa-miR1862a:pmrd
          Length = 88

 Score = 46.1 bits (23), Expect = 5e-06
 Identities = 23/23 (100%)
 Strand = Plus / Minus

                                 
Query: 6  atactccctccgtcccaaaataa 28
          |||||||||||||||||||||||
Sbjct: 88 atactccctccgtcccaaaataa 66




>48648_hpr-miR1120:pmrd
          Length = 85

 Score = 46.1 bits (23), Expect = 5e-06
 Identities = 23/23 (100%)
 Strand = Plus / Minus

                                 
Query: 6  atactccctccgtcccaaaataa 28
          |||||||||||||||||||||||
Sbjct: 81 atactccctccgtcccaaaataa 59



 Score = 44.1 bits (22), Expect = 2e-05
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                
Query: 7  tactccctccgtcccaaaataa 28
          ||||||||||||||||||||||
Sbjct: 6  tactccctccgtcccaaaataa 27




>54757_tmo-miR1122:pmrd
          Length = 180

 Score = 44.1 bits (22), Expect = 2e-05
 Identities = 28/30 (93%)
 Strand = Plus / Plus

                                        
Query: 7  tactccctccgtcccaaaataattgtctta 36
          ||||||||||||||||||||  ||||||||
Sbjct: 26 tactccctccgtcccaaaattgttgtctta 55




>50820_osa-miRf11605-akr:pmrd
          Length = 101

 Score = 44.1 bits (22), Expect = 2e-05
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                
Query: 7  tactccctccgtcccaaaataa 28
          ||||||||||||||||||||||
Sbjct: 95 tactccctccgtcccaaaataa 74




>50819_osa-miRf11604-akr:pmrd
          Length = 101

 Score = 44.1 bits (22), Expect = 2e-05
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                
Query: 7  tactccctccgtcccaaaataa 28
          ||||||||||||||||||||||
Sbjct: 95 tactccctccgtcccaaaataa 74




>50818_osa-miRf11603-akr:pmrd
          Length = 101

 Score = 44.1 bits (22), Expect = 2e-05
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                
Query: 7  tactccctccgtcccaaaataa 28
          ||||||||||||||||||||||
Sbjct: 7  tactccctccgtcccaaaataa 28




>49958_osa-miRf10743-akr:pmrd
          Length = 122

 Score = 44.1 bits (22), Expect = 2e-05
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                
Query: 6  atactccctccgtcccaaaata 27
          ||||||||||||||||||||||
Sbjct: 11 atactccctccgtcccaaaata 32



 Score = 42.1 bits (21), Expect = 8e-05
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                
Query: 7   tactccctccgtcccaaaata 27
           |||||||||||||||||||||
Sbjct: 110 tactccctccgtcccaaaata 90




>49957_osa-miRf10742-akr:pmrd
          Length = 128

 Score = 44.1 bits (22), Expect = 2e-05
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                 
Query: 6   atactccctccgtcccaaaata 27
           ||||||||||||||||||||||
Sbjct: 116 atactccctccgtcccaaaata 95



 Score = 42.1 bits (21), Expect = 8e-05
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                               
Query: 7  tactccctccgtcccaaaata 27
          |||||||||||||||||||||
Sbjct: 17 tactccctccgtcccaaaata 37




>49784_osa-miRf10569-akr:pmrd
          Length = 132

 Score = 44.1 bits (22), Expect = 2e-05
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                
Query: 7  tactccctccgtcccaaaataa 28
          ||||||||||||||||||||||
Sbjct: 11 tactccctccgtcccaaaataa 32




>49783_osa-miRf10568-akr:pmrd
          Length = 132

 Score = 44.1 bits (22), Expect = 2e-05
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                
Query: 7  tactccctccgtcccaaaataa 28
          ||||||||||||||||||||||
Sbjct: 11 tactccctccgtcccaaaataa 32




>49596_osa-miRf10381-akr:pmrd
          Length = 147

 Score = 44.1 bits (22), Expect = 2e-05
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                
Query: 7  tactccctccgtcccaaaataa 28
          ||||||||||||||||||||||
Sbjct: 1  tactccctccgtcccaaaataa 22




>49537_osa-miRf10322-akr:pmrd
          Length = 105

 Score = 44.1 bits (22), Expect = 2e-05
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                
Query: 6  atactccctccgtcccaaaata 27
          ||||||||||||||||||||||
Sbjct: 9  atactccctccgtcccaaaata 30




>49536_osa-miRf10321-akr:pmrd
          Length = 105

 Score = 44.1 bits (22), Expect = 2e-05
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                
Query: 6  atactccctccgtcccaaaata 27
          ||||||||||||||||||||||
Sbjct: 9  atactccctccgtcccaaaata 30




>49366_osa-miRf10151-akr:pmrd
          Length = 82

 Score = 44.1 bits (22), Expect = 2e-05
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                
Query: 6  atactccctccgtcccaaaata 27
          ||||||||||||||||||||||
Sbjct: 80 atactccctccgtcccaaaata 59




>48647_hpi-miR1122:pmrd
          Length = 180

 Score = 44.1 bits (22), Expect = 2e-05
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                
Query: 5  aatactccctccgtcccaaaat 26
          ||||||||||||||||||||||
Sbjct: 26 aatactccctccgtcccaaaat 47



 Score = 44.1 bits (22), Expect = 2e-05
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                 
Query: 5   aatactccctccgtcccaaaat 26
           ||||||||||||||||||||||
Sbjct: 156 aatactccctccgtcccaaaat 135