miRNEST 2.0, an integrative microRNA resource :: BLAST
BLASTN 2.2.20 [Feb-08-2009]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
>RF00906;MIR1122;AJ234485.1/114-218 4513:Hordeum vulgare
Length = 105
Score = 107 bits (54), Expect = 3e-23
Identities = 87/98 (88%)
Strand = Plus / Plus
Query: 7 tactccctccgtcccaaaataattgtcttaggtttagtacaattttataatagagctagt 66
||||||||||||| |||||||| ||||||| ||||||||||||| || ||||||||||
Sbjct: 5 tactccctccgtctcaaaataagtgtcttaatcttagtacaattttgtactagagctagt 64
Query: 67 acaaggttgagacatttattttgaaacagaggaagtag 104
|||| ||||||||| ||||||||| ||||||| |||||
Sbjct: 65 acaatgttgagacagttattttgagacagagggagtag 102
>RF00906;MIR1122;AF521177.1/206122-206018 4513:Hordeum vulgare
Length = 105
Score = 95.6 bits (48), Expect = 1e-19
Identities = 87/100 (87%)
Strand = Plus / Plus
Query: 5 aatactccctccgtcccaaaataattgtcttaggtttagtacaattttataatagagcta 64
|||||||||||| | |||||||||||| | | | ||||||||| ||| || ||||||||
Sbjct: 3 aatactccctccatttcaaaataattgtttcatgcttagtacaactttgtactagagcta 62
Query: 65 gtacaaggttgagacatttattttgaaacagaggaagtag 104
|||||| |||||||||||||||||||||| |||| |||||
Sbjct: 63 gtacaaagttgagacatttattttgaaacggagggagtag 102
>RF00906;MIR1122;AY133251.1/901-1005 112509:Hordeum vulgare subsp.
vulgare (domesticated barley)
Length = 105
Score = 87.7 bits (44), Expect = 3e-17
Identities = 74/84 (88%)
Strand = Plus / Plus
Query: 6 atactccctccgtcccaaaataattgtcttaggtttagtacaattttataatagagctag 65
||||||||||||| ||||||||| |||||| | |||||||||||| || |||||||||
Sbjct: 4 atactccctccgttccaaaataagtgtcttgagcgtagtacaattttgtactagagctag 63
Query: 66 tacaaggttgagacatttattttg 89
||||| ||||||||| ||||||||
Sbjct: 64 tacaaagttgagacagttattttg 87
Score = 48.1 bits (24), Expect = 2e-05
Identities = 27/28 (96%)
Strand = Plus / Minus
Query: 7 tactccctccgtcccaaaataattgtct 34
|||||||||||||||||||||| |||||
Sbjct: 101 tactccctccgtcccaaaataactgtct 74
>RF00906;MIR1122;DQ445238.1/5626-5730 112509:Hordeum vulgare
subsp. vulgare (domesticated barley)
Length = 105
Score = 85.7 bits (43), Expect = 1e-16
Identities = 73/83 (87%)
Strand = Plus / Plus
Query: 7 tactccctccgtcccaaaataattgtcttaggtttagtacaattttataatagagctagt 66
|||||||||||||||||||||| ||||||| | |||||| || |||||| |||| |||||
Sbjct: 5 tactccctccgtcccaaaataactgtcttaagcttagtataaatttatattagatctagt 64
Query: 67 acaaggttgagacatttattttg 89
| || ||||||||| ||||||||
Sbjct: 65 ataaagttgagacagttattttg 87
Score = 52.0 bits (26), Expect = 2e-06
Identities = 29/30 (96%)
Strand = Plus / Minus
Query: 5 aatactccctccgtcccaaaataattgtct 34
|||||||||||||||||||||||| |||||
Sbjct: 103 aatactccctccgtcccaaaataactgtct 74
>RF00906;MIR1122;EU593539.1/914-1018 4513:Hordeum vulgare
Length = 105
Score = 85.7 bits (43), Expect = 1e-16
Identities = 73/83 (87%)
Strand = Plus / Plus
Query: 7 tactccctccgtcccaaaataattgtcttaggtttagtacaattttataatagagctagt 66
|||||||||||||||||||||| ||||||| | |||||| || |||||| |||| |||||
Sbjct: 5 tactccctccgtcccaaaataactgtcttaagcttagtataaatttatactagatctagt 64
Query: 67 acaaggttgagacatttattttg 89
| || ||||||||| ||||||||
Sbjct: 65 ataaagttgagacagttattttg 87
Score = 52.0 bits (26), Expect = 2e-06
Identities = 29/30 (96%)
Strand = Plus / Minus
Query: 5 aatactccctccgtcccaaaataattgtct 34
|||||||||||||||||||||||| |||||
Sbjct: 103 aatactccctccgtcccaaaataactgtct 74
>RF00906;MIR1122;X83518.1/7301-7197 4513:Hordeum vulgare
Length = 105
Score = 83.8 bits (42), Expect = 4e-16
Identities = 84/98 (85%)
Strand = Plus / Plus
Query: 6 atactccctccgtcccaaaataattgtcttaggtttagtacaattttataatagagctag 65
||||||||||| || |||||||| ||||| | | ||||||||| ||| || |||||||||
Sbjct: 4 atactccctccatctcaaaataactgtctcaagcttagtacaactttgtagtagagctag 63
Query: 66 tacaaggttgagacatttattttgaaacagaggaagta 103
||||| ||||||||| |||||||| || ||||| ||||
Sbjct: 64 tacaaagttgagacacttattttggaagagagggagta 101
>RF00906;MIR1122;DQ871219.1/106890-106994 85692:Triticum turgidum
subsp. dicoccoides
Length = 105
Score = 81.8 bits (41), Expect = 2e-15
Identities = 74/85 (87%)
Strand = Plus / Plus
Query: 5 aatactccctccgtcccaaaataattgtcttaggtttagtacaattttataatagagcta 64
|||||||||||||||||||||||| |||||| | |||||| || ||| || ||||| ||
Sbjct: 3 aatactccctccgtcccaaaataagtgtcttgagcttagtaaaaatttgtactagagata 62
Query: 65 gtacaaggttgagacatttattttg 89
|||||| ||||||||| ||||||||
Sbjct: 63 gtacaaagttgagacacttattttg 87
>RF00906;MIR1122;AK249748.1/2677-2573 112509:Hordeum vulgare subsp.
vulgare (domesticated barley)
Length = 105
Score = 81.8 bits (41), Expect = 2e-15
Identities = 83/97 (85%)
Strand = Plus / Minus
Query: 7 tactccctccgtcccaaaataattgtcttaggtttagtacaattttataatagagctagt 66
||||||||||||| |||||||| ||||||| |||||| || |||||| || |||||||
Sbjct: 101 tactccctccgtcgcaaaataaatgtcttaaacttagtataaatttatagtaaagctagt 42
Query: 67 acaaggttgagacatttattttgaaacagaggaagta 103
|||| ||| ||||| |||||||| |||||||| ||||
Sbjct: 41 acaaagttaagacagttattttggaacagagggagta 5
>RF00906;MIR1122;FJ184990.1/3303-3406 4565:Triticum aestivum
(bread wheat)
Length = 104
Score = 79.8 bits (40), Expect = 7e-15
Identities = 74/84 (88%), Gaps = 1/84 (1%)
Strand = Plus / Plus
Query: 6 atactccctccgtcccaaaataattgtcttaggtttagtacaattttataatagagctag 65
||||||||||||||||||||||| ||||| | |||||||||||||||| ||||| |||
Sbjct: 4 atactccctccgtcccaaaataagtgtctcaaccttagtacaattttatactagagttag 63
Query: 66 tacaaggttgagacatttattttg 89
||||| | ||||||| ||||||||
Sbjct: 64 tacaaag-tgagacacttattttg 86
Score = 52.0 bits (26), Expect = 2e-06
Identities = 29/30 (96%)
Strand = Plus / Minus
Query: 5 aatactccctccgtcccaaaataattgtct 34
|||||||||||||||||||||||| |||||
Sbjct: 102 aatactccctccgtcccaaaataagtgtct 73
>RF00906;MIR1122;AK252392.1/1279-1175 112509:Hordeum vulgare
subsp. vulgare (domesticated barley)
Length = 105
Score = 79.8 bits (40), Expect = 7e-15
Identities = 73/84 (86%)
Strand = Plus / Plus
Query: 6 atactccctccgtcccaaaataattgtcttaggtttagtacaattttataatagagctag 65
|||| |||||||||||||||||| ||||||| | |||||||||||||||| |||||||
Sbjct: 4 ataccccctccgtcccaaaataagtgtcttaagcttagtacaattttatacatgagctag 63
Query: 66 tacaaggttgagacatttattttg 89
||||| ||| ||||| |||||||
Sbjct: 64 tacaaagttaagacagatattttg 87
Score = 44.1 bits (22), Expect = 4e-04
Identities = 28/30 (93%)
Strand = Plus / Minus
Query: 7 tactccctccgtcccaaaataattgtctta 36
||||||||||||||||||||| |||||||
Sbjct: 101 tactccctccgtcccaaaatatctgtctta 72
>RF00906;MIR1122;EU282239.1/1196-1300 52152:Elymus repens
Length = 105
Score = 79.8 bits (40), Expect = 7e-15
Identities = 73/84 (86%)
Strand = Plus / Plus
Query: 6 atactccctccgtcccaaaataattgtcttaggtttagtacaattttataatagagctag 65
||||||||||||||||||||||| ||||| | | ||||||||| ||| || || || ||
Sbjct: 4 atactccctccgtcccaaaataagtgtctcaagcttagtacaactttgtactaaagttaa 63
Query: 66 tacaaggttgagacatttattttg 89
||||| ||||||||||||||||||
Sbjct: 64 tacaaagttgagacatttattttg 87
Score = 48.1 bits (24), Expect = 2e-05
Identities = 27/28 (96%)
Strand = Plus / Minus
Query: 7 tactccctccgtcccaaaataattgtct 34
|||||||||||||||||||||| |||||
Sbjct: 101 tactccctccgtcccaaaataaatgtct 74
>RF00906;MIR1122;DQ445236.1/13423-13319 112509:Hordeum vulgare
subsp. vulgare (domesticated barley)
Length = 105
Score = 77.8 bits (39), Expect = 3e-14
Identities = 84/99 (84%)
Strand = Plus / Minus
Query: 5 aatactccctccgtcccaaaataattgtcttaggtttagtacaattttataatagagcta 64
|||||||||||||| ||||||||| | ||| | | ||||||||| ||| || ||||||||
Sbjct: 103 aatactccctccgttccaaaataactatctcaagcttagtacaactttgtactagagcta 44
Query: 65 gtacaaggttgagacatttattttgaaacagaggaagta 103
|||||| |||||||| |||||||| ||| |||| ||||
Sbjct: 43 gtacaaatttgagacacttattttggaacggagggagta 5
>RF00906;MIR1122;EU282755.1/953-849 112509:Hordeum vulgare subsp.
vulgare (domesticated barley)
Length = 105
Score = 77.8 bits (39), Expect = 3e-14
Identities = 72/83 (86%)
Strand = Plus / Plus
Query: 7 tactccctccgtcccaaaataattgtcttaggtttagtacaattttataatagagctagt 66
|||||||||||||||||||||| ||||| | | ||||| |||||| || || |||||||
Sbjct: 5 tactccctccgtcccaaaataagtgtctcaagcttagtgtaattttgtactacagctagt 64
Query: 67 acaaggttgagacatttattttg 89
|||| ||||||||| ||||||||
Sbjct: 65 acaaagttgagacacttattttg 87
Score = 50.1 bits (25), Expect = 6e-06
Identities = 28/29 (96%)
Strand = Plus / Minus
Query: 6 atactccctccgtcccaaaataattgtct 34
||||||||||||||||||||||| |||||
Sbjct: 102 atactccctccgtcccaaaataagtgtct 74
>RF00906;MIR1122;DQ995510.1/1615-1718 4513:Hordeum vulgare
Length = 104
Score = 75.8 bits (38), Expect = 1e-13
Identities = 75/86 (87%), Gaps = 1/86 (1%)
Strand = Plus / Plus
Query: 4 taatactccctccgtcccaaaataattgtcttaggtttagtacaattttataatagagct 63
|||||||||||||||| |||||||| ||||| | ||| |||||| ||| || |||||||
Sbjct: 2 taatactccctccgtctcaaaataactgtctcaacttt-gtacaactttgtactagagct 60
Query: 64 agtacaaggttgagacatttattttg 89
||||||| ||||||||| ||||||||
Sbjct: 61 agtacaaagttgagacagttattttg 86
>RF00906;MIR1122;AY943294.1/62260-62364 112509:Hordeum vulgare
subsp. vulgare (domesticated barley)
Length = 105
Score = 73.8 bits (37), Expect = 4e-13
Identities = 82/97 (84%)
Strand = Plus / Plus
Query: 7 tactccctccgtcccaaaataattgtcttaggtttagtacaattttataatagagctagt 66
|||||||||||| ||||||||| ||||||| | ||| ||||||||| || || | ||| |
Sbjct: 5 tactccctccgttccaaaataagtgtcttaagcttaatacaattttgtactaaatctaat 64
Query: 67 acaaggttgagacatttattttgaaacagaggaagta 103
|||| ||||||||| |||||||| || |||||||||
Sbjct: 65 acaaagttgagacagttattttgggacggaggaagta 101
>RF00906;MIR1122;AF474373.1/50497-50394 112509:Hordeum vulgare
subsp. vulgare (domesticated barley)
Length = 104
Score = 73.8 bits (37), Expect = 4e-13
Identities = 73/85 (85%)
Strand = Plus / Plus
Query: 5 aatactccctccgtcccaaaataattgtcttaggtttagtacaattttataatagagcta 64
||||||| |||||||||||||||| ||||| | | |||||||| ||| || |||| |||
Sbjct: 3 aatactcactccgtcccaaaataactgtctcaagcctagtacaactttgtactagaacta 62
Query: 65 gtacaaggttgagacatttattttg 89
|||||| ||||||||| ||||||||
Sbjct: 63 gtacaaagttgagacacttattttg 87
>RF00906;MIR1122;EU282250.1/1190-1294 52152:Elymus repens
Length = 105
Score = 71.9 bits (36), Expect = 2e-12
Identities = 72/84 (85%)
Strand = Plus / Plus
Query: 6 atactccctccgtcccaaaataattgtcttaggtttagtacaattttataatagagctag 65
||||||||||||||||||||||| ||||| | | ||||||||| || || || || ||
Sbjct: 4 atactccctccgtcccaaaataagtgtctcaagcttagtacaaccttgtactaaagttaa 63
Query: 66 tacaaggttgagacatttattttg 89
||||| ||||||||||||||||||
Sbjct: 64 tacaaagttgagacatttattttg 87
Score = 48.1 bits (24), Expect = 2e-05
Identities = 27/28 (96%)
Strand = Plus / Minus
Query: 7 tactccctccgtcccaaaataattgtct 34
|||||||||||||||||||||| |||||
Sbjct: 101 tactccctccgtcccaaaataaatgtct 74
>RF00906;MIR1122;EU282771.1/632-528 112509:Hordeum vulgare subsp.
vulgare (domesticated barley)
Length = 105
Score = 67.9 bits (34), Expect = 3e-11
Identities = 82/98 (83%)
Strand = Plus / Plus
Query: 7 tactccctccgtcccaaaataattgtcttaggtttagtacaattttataatagagctagt 66
|||||||||||||||||||||| | ||| | ||||||||| |||||| ||||||||||
Sbjct: 5 tactccctccgtcccaaaataactttctcaaacttagtacaactttatactagagctagt 64
Query: 67 acaaggttgagacatttattttgaaacagaggaagtag 104
|| ||||||| | ||||||||| || |||| |||||
Sbjct: 65 gtaaagttgagatacttattttgagacggagggagtag 102
>RF00906;MIR1122;AF525764.1/1593-1489 200361:Aegilops tauschii
subsp. strangulata
Length = 105
Score = 65.9 bits (33), Expect = 1e-10
Identities = 42/45 (93%)
Strand = Plus / Plus
Query: 4 taatactccctccgtcccaaaataattgtcttaggtttagtacaa 48
||||||||||| |||||||||||||||||||| | ||||||||||
Sbjct: 2 taatactccctacgtcccaaaataattgtctttgatttagtacaa 46
Score = 52.0 bits (26), Expect = 2e-06
Identities = 38/42 (90%)
Strand = Plus / Minus
Query: 7 tactccctccgtcccaaaataattgtcttaggtttagtacaa 48
|||||||||| ||||||||||| |||||| | ||||||||||
Sbjct: 101 tactccctccatcccaaaataagtgtctttgctttagtacaa 60
>RF00906;MIR1122;AK249560.1/988-1092 112509:Hordeum vulgare subsp.
vulgare (domesticated barley)
Length = 105
Score = 61.9 bits (31), Expect = 2e-09
Identities = 70/83 (84%)
Strand = Plus / Minus
Query: 7 tactccctccgtcccaaaataattgtcttaggtttagtacaattttataatagagctagt 66
|||||||||||||||||||||| ||||| | ||| ||||| ||| || || |||||||
Sbjct: 101 tactccctccgtcccaaaataactgtctcaaacttaatacaagtttgtactatagctagt 42
Query: 67 acaaggttgagacatttattttg 89
| || ||||||||| ||||||||
Sbjct: 41 ataaagttgagacacttattttg 19
>RF00906;MIR1122;EU282768.1/632-528 112509:Hordeum vulgare subsp.
vulgare (domesticated barley)
Length = 105
Score = 60.0 bits (30), Expect = 6e-09
Identities = 81/98 (82%)
Strand = Plus / Plus
Query: 7 tactccctccgtcccaaaataattgtcttaggtttagtacaattttataatagagctagt 66
|||||||||||||||||||||| | ||| | ||||||||| |||||| ||||||||||
Sbjct: 5 tactccctccgtcccaaaataactttctcaaacttagtacaactttatactagagctagt 64
Query: 67 acaaggttgagacatttattttgaaacagaggaagtag 104
|| | ||||| | ||||||||| || |||| |||||
Sbjct: 65 gtaaagctgagatacttattttgagacggagggagtag 102
>RF00906;MIR1122;DQ175992.1/50-154 112509:Hordeum vulgare subsp.
vulgare (domesticated barley)
Length = 105
Score = 60.0 bits (30), Expect = 6e-09
Identities = 30/30 (100%)
Strand = Plus / Minus
Query: 7 tactccctccgtcccaaaataattgtctta 36
||||||||||||||||||||||||||||||
Sbjct: 101 tactccctccgtcccaaaataattgtctta 72
>RF00906;MIR1122;AJ400714.1/3663-3767 4565:Triticum aestivum (bread
wheat)
Length = 105
Score = 56.0 bits (28), Expect = 1e-07
Identities = 70/84 (83%)
Strand = Plus / Minus
Query: 6 atactccctccgtcccaaaataattgtcttaggtttagtacaattttataatagagctag 65
||||||||||||||||||||||| ||||| | ||||||||| ||| || ||||| |||
Sbjct: 102 atactccctccgtcccaaaataagtgtctcaaccttagtacaactttgtactagagttag 43
Query: 66 tacaaggttgagacatttattttg 89
| || |||||||| ||||||||
Sbjct: 42 tgtaaaattgagacacttattttg 19
>RF00906;MIR1122;EU096089.1/14944-15085 112509:Hordeum vulgare
subsp. vulgare (domesticated barley)
Length = 142
Score = 56.0 bits (28), Expect = 1e-07
Identities = 34/36 (94%)
Strand = Plus / Minus
Query: 6 atactccctccgtcccaaaataattgtcttaggttt 41
||||||||||||||||||||| |||||||||||||
Sbjct: 139 atactccctccgtcccaaaattcttgtcttaggttt 104
Score = 44.1 bits (22), Expect = 4e-04
Identities = 31/34 (91%)
Strand = Plus / Plus
Query: 4 taatactccctccgtcccaaaataattgtcttag 37
||||||||||||||||||||| | |||||||||
Sbjct: 2 taatactccctccgtcccaaacttcttgtcttag 35
>RF00906;MIR1122;DQ901436.1/1229-1333 4565:Triticum aestivum (bread
wheat)
Length = 105
Score = 54.0 bits (27), Expect = 4e-07
Identities = 69/83 (83%)
Strand = Plus / Minus
Query: 7 tactccctccgtcccaaaataattgtcttaggtttagtacaattttataatagagctagt 66
||||| |||| || |||||||| ||||| | | |||||||| ||| || || |||||||
Sbjct: 101 tactcactccatctcaaaataagtgtctcaactctagtacaactttgtattaaagctagt 42
Query: 67 acaaggttgagacatttattttg 89
|||| ||||||||| ||||||||
Sbjct: 41 acaaagttgagacacttattttg 19
Score = 44.1 bits (22), Expect = 4e-04
Identities = 25/26 (96%)
Strand = Plus / Plus
Query: 9 ctccctccgtcccaaaataattgtct 34
|||||||||||||||||||| |||||
Sbjct: 7 ctccctccgtcccaaaataagtgtct 32
>RF00906;MIR1122;DQ537336.1/120340-120474 4565:Triticum aestivum
(bread wheat)
Length = 135
Score = 54.0 bits (27), Expect = 4e-07
Identities = 30/31 (96%)
Strand = Plus / Minus
Query: 3 ataatactccctccgtcccaaaataattgtc 33
|||||||||||||||||| ||||||||||||
Sbjct: 135 ataatactccctccgtccaaaaataattgtc 105
>RF00906;MIR1122;AF427791.1/222786-222921 4513:Hordeum vulgare
Length = 136
Score = 54.0 bits (27), Expect = 4e-07
Identities = 30/31 (96%)
Strand = Plus / Plus
Query: 7 tactccctccgtcccaaaataattgtcttag 37
|||||||||||||||||||| ||||||||||
Sbjct: 5 tactccctccgtcccaaaattattgtcttag 35
Score = 44.1 bits (22), Expect = 4e-04
Identities = 31/34 (91%)
Strand = Plus / Minus
Query: 3 ataatactccctccgtcccaaaataattgtctta 36
|||||||||||| ||||||||||| ||||||||
Sbjct: 136 ataatactcccttcgtcccaaaattcttgtctta 103
>RF00906;MIR1122;FJ236275.1/674-570 4573:Aegilops speltoides
Length = 105
Score = 54.0 bits (27), Expect = 4e-07
Identities = 69/83 (83%)
Strand = Plus / Plus
Query: 7 tactccctccgtcccaaaataattgtcttaggtttagtacaattttataatagagctagt 66
||||||||||||| |||||||| ||||| | | |||||||| ||| || || || ||||
Sbjct: 5 tactccctccgtctcaaaataagtgtctcaagcctagtacaactttgtactaaagttagt 64
Query: 67 acaaggttgagacatttattttg 89
|||| ||| ||||| ||||||||
Sbjct: 65 acaaagttaagacacttattttg 87
Score = 52.0 bits (26), Expect = 2e-06
Identities = 29/30 (96%)
Strand = Plus / Minus
Query: 7 tactccctccgtcccaaaataattgtctta 36
|||||||||||||||||||||| |||||||
Sbjct: 101 tactccctccgtcccaaaataagtgtctta 72
>RF00906;MIR1122;FJ374610.1/683-817 4568:Triticum monococcum
Length = 135
Score = 50.1 bits (25), Expect = 6e-06
Identities = 31/33 (93%)
Strand = Plus / Minus
Query: 5 aatactccctccgtcccaaaataattgtcttag 37
|||||||||||||||||||||| |||||||||
Sbjct: 133 aatactccctccgtcccaaaattcttgtcttag 101
>RF00906;MIR1122;AF488415.1/78603-78755 4568:Triticum monococcum
Length = 153
Score = 50.1 bits (25), Expect = 6e-06
Identities = 28/29 (96%)
Strand = Plus / Minus
Query: 6 atactccctccgtcccaaaataattgtct 34
||||||||||||||||||||||| |||||
Sbjct: 150 atactccctccgtcccaaaataactgtct 122
>RF00906;MIR1122;AF325197.1/3732-3639 4565:Triticum aestivum (bread
wheat)
Length = 94
Score = 50.1 bits (25), Expect = 6e-06
Identities = 37/41 (90%)
Strand = Plus / Plus
Query: 63 tagtacaaggttgagacatttattttgaaacagaggaagta 103
|||||||| |||||| ||| ||||||||||| |||||||||
Sbjct: 50 tagtacaaagttgagtcatctattttgaaacggaggaagta 90
>RF00906;MIR1122;AY235464.1/714-838 4565:Triticum aestivum (bread
wheat)
Length = 125
Score = 50.1 bits (25), Expect = 6e-06
Identities = 28/29 (96%)
Strand = Plus / Plus
Query: 5 aatactccctccgtcccaaaataattgtc 33
||||||||||||||||||||||| |||||
Sbjct: 3 aatactccctccgtcccaaaatacttgtc 31
>RF00906;MIR1122;AY821694.1/1308-1197 37674:Crithopsis delileana
Length = 112
Score = 50.1 bits (25), Expect = 6e-06
Identities = 28/29 (96%)
Strand = Plus / Plus
Query: 7 tactccctccgtcccaaaataattgtctt 35
|||||||||||||||||||||| ||||||
Sbjct: 5 tactccctccgtcccaaaataagtgtctt 33
>RF00906;MIR1122;AAAA02034555.1/16647-16527 39946:Oryza sativa
Indica Group
Length = 121
Score = 50.1 bits (25), Expect = 6e-06
Identities = 25/25 (100%)
Strand = Plus / Plus
Query: 3 ataatactccctccgtcccaaaata 27
|||||||||||||||||||||||||
Sbjct: 34 ataatactccctccgtcccaaaata 58
Score = 48.1 bits (24), Expect = 2e-05
Identities = 24/24 (100%)
Strand = Plus / Minus
Query: 3 ataatactccctccgtcccaaaat 26
||||||||||||||||||||||||
Sbjct: 88 ataatactccctccgtcccaaaat 65
>RF00906;MIR1122;AAAA02026282.1/2845-2975 39946:Oryza sativa
Indica Group
Length = 131
Score = 50.1 bits (25), Expect = 6e-06
Identities = 25/25 (100%)
Strand = Plus / Plus
Query: 3 ataatactccctccgtcccaaaata 27
|||||||||||||||||||||||||
Sbjct: 1 ataatactccctccgtcccaaaata 25
>RF00906;MIR1122;AAAA02000966.1/612-453 39946:Oryza sativa Indica
Group
Length = 160
Score = 50.1 bits (25), Expect = 6e-06
Identities = 25/25 (100%)
Strand = Plus / Plus
Query: 6 atactccctccgtcccaaaataatt 30
|||||||||||||||||||||||||
Sbjct: 4 atactccctccgtcccaaaataatt 28
Score = 44.1 bits (22), Expect = 4e-04
Identities = 22/22 (100%)
Strand = Plus / Minus
Query: 7 tactccctccgtcccaaaataa 28
||||||||||||||||||||||
Sbjct: 156 tactccctccgtcccaaaataa 135
>RF00906;MIR1122;AACV01024885.1/21195-21061 39947:Oryza sativa
Japonica Group
Length = 135
Score = 50.1 bits (25), Expect = 6e-06
Identities = 25/25 (100%)
Strand = Plus / Plus
Query: 3 ataatactccctccgtcccaaaata 27
|||||||||||||||||||||||||
Sbjct: 1 ataatactccctccgtcccaaaata 25
>RF00906;MIR1122;AAAA02007975.1/29302-29380 39946:Oryza sativa
Indica Group
Length = 79
Score = 50.1 bits (25), Expect = 6e-06
Identities = 25/25 (100%)
Strand = Plus / Plus
Query: 3 ataatactccctccgtcccaaaata 27
|||||||||||||||||||||||||
Sbjct: 1 ataatactccctccgtcccaaaata 25
>RF00906;MIR1122;AACV01003595.1/38638-38749 39947:Oryza sativa
Japonica Group
Length = 112
Score = 50.1 bits (25), Expect = 6e-06
Identities = 25/25 (100%)
Strand = Plus / Minus
Query: 3 ataatactccctccgtcccaaaata 27
|||||||||||||||||||||||||
Sbjct: 112 ataatactccctccgtcccaaaata 88
>RF00906;MIR1122;AAAA02019483.1/16379-16491 39946:Oryza sativa
Indica Group
Length = 113
Score = 50.1 bits (25), Expect = 6e-06
Identities = 25/25 (100%)
Strand = Plus / Minus
Query: 4 taatactccctccgtcccaaaataa 28
|||||||||||||||||||||||||
Sbjct: 112 taatactccctccgtcccaaaataa 88
>RF00906;MIR1122;AY235466.1/780-656 4565:Triticum aestivum (bread
wheat)
Length = 125
Score = 48.1 bits (24), Expect = 2e-05
Identities = 27/28 (96%)
Strand = Plus / Minus
Query: 6 atactccctccgtcccaaaataattgtc 33
|||||||||||||||||||||| |||||
Sbjct: 122 atactccctccgtcccaaaatacttgtc 95
>RF00906;MIR1122;EU626553.1/30213-30109 4572:Triticum urartu
Length = 105
Score = 48.1 bits (24), Expect = 2e-05
Identities = 33/36 (91%)
Strand = Plus / Minus
Query: 7 tactccctccgtcccaaaataattgtcttaggttta 42
|||||||||||||||||||| ||||||||| ||||
Sbjct: 101 tactccctccgtcccaaaattcttgtcttagattta 66
>RF00906;MIR1122;AJ234583.1/157-260 4513:Hordeum vulgare
Length = 104
Score = 48.1 bits (24), Expect = 2e-05
Identities = 27/28 (96%)
Strand = Plus / Minus
Query: 7 tactccctccgtcccaaaataattgtct 34
||||||||||||| ||||||||||||||
Sbjct: 100 tactccctccgtctcaaaataattgtct 73
>RF00906;MIR1122;AY887089.1/1801-1936 112509:Hordeum vulgare subsp.
vulgare (domesticated barley)
Length = 136
Score = 48.1 bits (24), Expect = 2e-05
Identities = 30/32 (93%)
Strand = Plus / Minus
Query: 6 atactccctccgtcccaaaataattgtcttag 37
||||||||||||||||||||| |||||||||
Sbjct: 133 atactccctccgtcccaaaattcttgtcttag 102
>RF00906;MIR1122;AK250735.1/291-376 112509:Hordeum vulgare subsp.
vulgare (domesticated barley)
Length = 86
Score = 48.1 bits (24), Expect = 2e-05
Identities = 27/28 (96%)
Strand = Plus / Plus
Query: 7 tactccctccgtcccaaaataattgtct 34
|||||||||||||||||||||| |||||
Sbjct: 5 tactccctccgtcccaaaataagtgtct 32
>RF00906;MIR1122;EU282251.1/1314-1209 52152:Elymus repens
Length = 106
Score = 48.1 bits (24), Expect = 2e-05
Identities = 27/28 (96%)
Strand = Plus / Minus
Query: 6 atactccctccgtcccaaaataattgtc 33
||||||||||||||||||||||| ||||
Sbjct: 103 atactccctccgtcccaaaataagtgtc 76
Score = 46.1 bits (23), Expect = 9e-05
Identities = 26/27 (96%)
Strand = Plus / Plus
Query: 7 tactccctccgtcccaaaataattgtc 33
|||||||||||||||||||||| ||||
Sbjct: 5 tactccctccgtcccaaaataagtgtc 31
>RF00906;MIR1122;AAAA02004035.1/49440-49310 39946:Oryza sativa
Indica Group
Length = 131
Score = 48.1 bits (24), Expect = 2e-05
Identities = 24/24 (100%)
Strand = Plus / Minus
Query: 4 taatactccctccgtcccaaaata 27
||||||||||||||||||||||||
Sbjct: 130 taatactccctccgtcccaaaata 107
>RF00906;MIR1122;AAAA02033927.1/2539-2391 39946:Oryza sativa Indica
Group
Length = 149
Score = 48.1 bits (24), Expect = 2e-05
Identities = 24/24 (100%)
Strand = Plus / Minus
Query: 4 taatactccctccgtcccaaaata 27
||||||||||||||||||||||||
Sbjct: 148 taatactccctccgtcccaaaata 125
>RF00906;MIR1122;AAAA02026694.1/32137-32261 39946:Oryza sativa
Indica Group
Length = 125
Score = 48.1 bits (24), Expect = 2e-05
Identities = 24/24 (100%)
Strand = Plus / Minus
Query: 4 taatactccctccgtcccaaaata 27
||||||||||||||||||||||||
Sbjct: 124 taatactccctccgtcccaaaata 101
>RF00906;MIR1122;AL831801.4/77594-77709 4530:Oryza sativa (rice)
Length = 116
Score = 48.1 bits (24), Expect = 2e-05
Identities = 24/24 (100%)
Strand = Plus / Minus
Query: 4 taatactccctccgtcccaaaata 27
||||||||||||||||||||||||
Sbjct: 115 taatactccctccgtcccaaaata 92
>RF00906;MIR1122;AP003280.2/146720-146590 39947:Oryza sativa
Japonica Group
Length = 131
Score = 48.1 bits (24), Expect = 2e-05
Identities = 24/24 (100%)
Strand = Plus / Minus
Query: 4 taatactccctccgtcccaaaata 27
||||||||||||||||||||||||
Sbjct: 130 taatactccctccgtcccaaaata 107
>RF00906;MIR1122;AAAA02028034.1/27580-27414 39946:Oryza sativa
Indica Group
Length = 167
Score = 48.1 bits (24), Expect = 2e-05
Identities = 24/24 (100%)
Strand = Plus / Minus
Query: 4 taatactccctccgtcccaaaata 27
||||||||||||||||||||||||
Sbjct: 166 taatactccctccgtcccaaaata 143
>RF00906;MIR1122;AACV01024869.1/7310-7232 39947:Oryza sativa
Japonica Group
Length = 79
Score = 48.1 bits (24), Expect = 2e-05
Identities = 24/24 (100%)
Strand = Plus / Minus
Query: 4 taatactccctccgtcccaaaata 27
||||||||||||||||||||||||
Sbjct: 78 taatactccctccgtcccaaaata 55
>RF00906;MIR1122;AAAA02018626.1/12551-12423 39946:Oryza sativa
Indica Group
Length = 129
Score = 48.1 bits (24), Expect = 2e-05
Identities = 24/24 (100%)
Strand = Plus / Minus
Query: 5 aatactccctccgtcccaaaataa 28
||||||||||||||||||||||||
Sbjct: 127 aatactccctccgtcccaaaataa 104
>RF00906;MIR1122;AY947286.1/128-10 4530:Oryza sativa (rice)
Length = 119
Score = 48.1 bits (24), Expect = 2e-05
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 4 taatactccctccgtcccaaaata 27
||||||||||||||||||||||||
Sbjct: 2 taatactccctccgtcccaaaata 25
>RF01058;MIR806;AP008208.1/6823788-6823544 39947:Oryza sativa
Japonica Group
Length = 245
Score = 46.1 bits (23), Expect = 9e-05
Identities = 23/23 (100%)
Strand = Plus / Minus
Query: 6 atactccctccgtcccaaaataa 28
|||||||||||||||||||||||
Sbjct: 245 atactccctccgtcccaaaataa 223
>RF01058;MIR806;AP008208.1/24144061-24144300 39947:Oryza sativa
Japonica Group
Length = 240
Score = 46.1 bits (23), Expect = 9e-05
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 6 atactccctccgtcccaaaataa 28
|||||||||||||||||||||||
Sbjct: 1 atactccctccgtcccaaaataa 23
>RF01058;MIR806;AACV01025022.1/35011-35254 39947:Oryza sativa
Japonica Group
Length = 244
Score = 46.1 bits (23), Expect = 9e-05
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 6 atactccctccgtcccaaaataa 28
|||||||||||||||||||||||
Sbjct: 1 atactccctccgtcccaaaataa 23
>RF01058;MIR806;AAAA02004537.1/25464-25706 39946:Oryza sativa
Indica Group
Length = 243
Score = 46.1 bits (23), Expect = 9e-05
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 6 atactccctccgtcccaaaataa 28
|||||||||||||||||||||||
Sbjct: 1 atactccctccgtcccaaaataa 23
>RF01058;MIR806;AACV01004890.1/11000-11239 39947:Oryza sativa
Japonica Group
Length = 240
Score = 46.1 bits (23), Expect = 9e-05
Identities = 23/23 (100%)
Strand = Plus / Minus
Query: 6 atactccctccgtcccaaaataa 28
|||||||||||||||||||||||
Sbjct: 240 atactccctccgtcccaaaataa 218
>RF01058;MIR806;AAAA02009876.1/3121-2881 39946:Oryza sativa Indica
Group
Length = 241
Score = 46.1 bits (23), Expect = 9e-05
Identities = 23/23 (100%)
Strand = Plus / Minus
Query: 6 atactccctccgtcccaaaataa 28
|||||||||||||||||||||||
Sbjct: 241 atactccctccgtcccaaaataa 219
>RF00906;MIR1122;ABXC01006480.1/93142-93031 4558:Sorghum bicolor
(sorghum)
Length = 112
Score = 46.1 bits (23), Expect = 9e-05
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 6 atactccctccgtcccaaaataa 28
|||||||||||||||||||||||
Sbjct: 4 atactccctccgtcccaaaataa 26
>RF00906;MIR1122;U29095.1/333-439 4565:Triticum aestivum (bread
wheat)
Length = 107
Score = 46.1 bits (23), Expect = 9e-05
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 6 atactccctccgtcccaaaataa 28
|||||||||||||||||||||||
Sbjct: 4 atactccctccgtcccaaaataa 26
>RF00906;MIR1122;DQ267106.1/62901-62968 4572:Triticum urartu
Length = 68
Score = 46.1 bits (23), Expect = 9e-05
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 6 atactccctccgtcccaaaataa 28
|||||||||||||||||||||||
Sbjct: 4 atactccctccgtcccaaaataa 26
>RF00906;MIR1122;AB182945.1/6773-6906 4565:Triticum aestivum (bread
wheat)
Length = 134
Score = 46.1 bits (23), Expect = 9e-05
Identities = 29/31 (93%)
Strand = Plus / Minus
Query: 4 taatactccctccgtcccaaaataattgtct 34
||||||||||||||| ||||||||| |||||
Sbjct: 133 taatactccctccgttccaaaataagtgtct 103
>RF00906;MIR1122;AY821733.1/621-487 4568:Triticum monococcum
Length = 135
Score = 46.1 bits (23), Expect = 9e-05
Identities = 29/31 (93%)
Strand = Plus / Plus
Query: 7 tactccctccgtcccaaaataattgtcttag 37
|||||||||||||||||||| |||||||||
Sbjct: 5 tactccctccgtcccaaaattcttgtcttag 35
>RF00906;MIR1122;FJ491378.1/3751-3855 4550:Secale cereale (rye)
Length = 105
Score = 46.1 bits (23), Expect = 9e-05
Identities = 35/39 (89%)
Strand = Plus / Plus
Query: 10 tccctccgtcccaaaataattgtcttaggtttagtacaa 48
||||||||||||||||||| |||| | | ||||||||||
Sbjct: 8 tccctccgtcccaaaataagtgtcattgatttagtacaa 46
>RF00906;MIR1122;FJ491378.1/4581-4466 4550:Secale cereale (rye)
Length = 116
Score = 46.1 bits (23), Expect = 9e-05
Identities = 23/23 (100%)
Strand = Plus / Minus
Query: 6 atactccctccgtcccaaaataa 28
|||||||||||||||||||||||
Sbjct: 113 atactccctccgtcccaaaataa 91
>RF00906;MIR1122;AF521177.1/81577-81474 4513:Hordeum vulgare
Length = 104
Score = 46.1 bits (23), Expect = 9e-05
Identities = 23/23 (100%)
Strand = Plus / Minus
Query: 6 atactccctccgtcccaaaataa 28
|||||||||||||||||||||||
Sbjct: 101 atactccctccgtcccaaaataa 79
>RF00906;MIR1122;EU282770.1/593-711 112509:Hordeum vulgare subsp.
vulgare (domesticated barley)
Length = 119
Score = 46.1 bits (23), Expect = 9e-05
Identities = 26/27 (96%)
Strand = Plus / Minus
Query: 7 tactccctccgtcccaaaataattgtc 33
|||||||||||||||||||||| ||||
Sbjct: 115 tactccctccgtcccaaaataactgtc 89
>RF00906;MIR1122;AJ704455.1/466-601 4513:Hordeum vulgare
Length = 136
Score = 46.1 bits (23), Expect = 9e-05
Identities = 32/35 (91%)
Strand = Plus / Minus
Query: 7 tactccctccgtcccaaaataattgtcttaggttt 41
|||||||||||||||||||| |||||||| ||||
Sbjct: 132 tactccctccgtcccaaaattcttgtcttaagttt 98
Score = 44.1 bits (22), Expect = 4e-04
Identities = 28/30 (93%)
Strand = Plus / Plus
Query: 7 tactccctccgtcccaaaataattgtctta 36
|||||||||||||||||||| ||||||||
Sbjct: 5 tactccctccgtcccaaaattcttgtctta 34
>RF00906;MIR1122;FJ374625.1/3001-2870 4573:Aegilops speltoides
Length = 132
Score = 46.1 bits (23), Expect = 9e-05
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 6 atactccctccgtcccaaaataa 28
|||||||||||||||||||||||
Sbjct: 4 atactccctccgtcccaaaataa 26
>RF00906;MIR1122;AAAA02025635.1/7223-7330 39946:Oryza sativa
Indica Group
Length = 108
Score = 46.1 bits (23), Expect = 9e-05
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 5 aatactccctccgtcccaaaata 27
|||||||||||||||||||||||
Sbjct: 3 aatactccctccgtcccaaaata 25
>RF00906;MIR1122;AACV01004030.1/351-512 39947:Oryza sativa Japonica
Group
Length = 162
Score = 46.1 bits (23), Expect = 9e-05
Identities = 23/23 (100%)
Strand = Plus / Minus
Query: 5 aatactccctccgtcccaaaata 27
|||||||||||||||||||||||
Sbjct: 160 aatactccctccgtcccaaaata 138
>RF00906;MIR1122;AAAA02028442.1/1248-1113 39946:Oryza sativa
Indica Group
Length = 136
Score = 46.1 bits (23), Expect = 9e-05
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 6 atactccctccgtcccaaaataa 28
|||||||||||||||||||||||
Sbjct: 4 atactccctccgtcccaaaataa 26
Score = 44.1 bits (22), Expect = 4e-04
Identities = 22/22 (100%)
Strand = Plus / Minus
Query: 7 tactccctccgtcccaaaataa 28
||||||||||||||||||||||
Sbjct: 132 tactccctccgtcccaaaataa 111
>RF00906;MIR1122;AAAA02018379.1/19319-19440 39946:Oryza sativa
Indica Group
Length = 122
Score = 46.1 bits (23), Expect = 9e-05
Identities = 23/23 (100%)
Strand = Plus / Minus
Query: 6 atactccctccgtcccaaaataa 28
|||||||||||||||||||||||
Sbjct: 119 atactccctccgtcccaaaataa 97
>RF00906;MIR1122;AP008214.1/14410723-14410632 39947:Oryza sativa
Japonica Group
Length = 92
Score = 46.1 bits (23), Expect = 9e-05
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 6 atactccctccgtcccaaaataa 28
|||||||||||||||||||||||
Sbjct: 4 atactccctccgtcccaaaataa 26
>RF00906;MIR1122;AACV01020861.1/25006-25108 39947:Oryza sativa
Japonica Group
Length = 103
Score = 46.1 bits (23), Expect = 9e-05
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 6 atactccctccgtcccaaaataa 28
|||||||||||||||||||||||
Sbjct: 4 atactccctccgtcccaaaataa 26
Score = 44.1 bits (22), Expect = 4e-04
Identities = 22/22 (100%)
Strand = Plus / Minus
Query: 7 tactccctccgtcccaaaataa 28
||||||||||||||||||||||
Sbjct: 99 tactccctccgtcccaaaataa 78
>RF00906;MIR1122;AP003303.4/77673-77577 39947:Oryza sativa
Japonica Group
Length = 97
Score = 46.1 bits (23), Expect = 9e-05
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 6 atactccctccgtcccaaaataa 28
|||||||||||||||||||||||
Sbjct: 4 atactccctccgtcccaaaataa 26
Score = 44.1 bits (22), Expect = 4e-04
Identities = 22/22 (100%)
Strand = Plus / Minus
Query: 7 tactccctccgtcccaaaataa 28
||||||||||||||||||||||
Sbjct: 93 tactccctccgtcccaaaataa 72
>RF00906;MIR1122;AP008207.1/22739295-22739406 39947:Oryza sativa
Japonica Group
Length = 112
Score = 46.1 bits (23), Expect = 9e-05
Identities = 23/23 (100%)
Strand = Plus / Minus
Query: 5 aatactccctccgtcccaaaata 27
|||||||||||||||||||||||
Sbjct: 110 aatactccctccgtcccaaaata 88
>RF00906;MIR1122;AC079357.3/127350-127255 39947:Oryza sativa
Japonica Group
Length = 96
Score = 46.1 bits (23), Expect = 9e-05
Identities = 23/23 (100%)
Strand = Plus / Minus
Query: 5 aatactccctccgtcccaaaata 27
|||||||||||||||||||||||
Sbjct: 94 aatactccctccgtcccaaaata 72
>RF00906;MIR1122;AACV01001981.1/7100-7193 39947:Oryza sativa
Japonica Group
Length = 94
Score = 46.1 bits (23), Expect = 9e-05
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 6 atactccctccgtcccaaaataa 28
|||||||||||||||||||||||
Sbjct: 4 atactccctccgtcccaaaataa 26
>RF00906;MIR1122;AC226706.2/62906-62750 63629:Oryza minuta
Length = 157
Score = 46.1 bits (23), Expect = 9e-05
Identities = 23/23 (100%)
Strand = Plus / Minus
Query: 5 aatactccctccgtcccaaaata 27
|||||||||||||||||||||||
Sbjct: 155 aatactccctccgtcccaaaata 133
>RF00906;MIR1122;AAAA02007660.1/3740-3838 39946:Oryza sativa
Indica Group
Length = 99
Score = 46.1 bits (23), Expect = 9e-05
Identities = 23/23 (100%)
Strand = Plus / Minus
Query: 5 aatactccctccgtcccaaaata 27
|||||||||||||||||||||||
Sbjct: 97 aatactccctccgtcccaaaata 75
Score = 44.1 bits (22), Expect = 4e-04
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 6 atactccctccgtcccaaaata 27
||||||||||||||||||||||
Sbjct: 4 atactccctccgtcccaaaata 25
>RF00906;MIR1122;AP008215.1/21144119-21144034 39947:Oryza sativa
Japonica Group
Length = 86
Score = 46.1 bits (23), Expect = 9e-05
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 5 aatactccctccgtcccaaaata 27
|||||||||||||||||||||||
Sbjct: 3 aatactccctccgtcccaaaata 25
>RF01058;MIR806;AACV01004692.1/2655-2900 39947:Oryza sativa
Japonica Group
Length = 246
Score = 44.1 bits (22), Expect = 4e-04
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 7 tactccctccgtcccaaaataa 28
||||||||||||||||||||||
Sbjct: 2 tactccctccgtcccaaaataa 23
>RF01058;MIR806;AL731615.4/103346-103100 39947:Oryza sativa
Japonica Group
Length = 247
Score = 44.1 bits (22), Expect = 4e-04
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 7 tactccctccgtcccaaaataa 28
||||||||||||||||||||||
Sbjct: 2 tactccctccgtcccaaaataa 23
>RF01058;MIR806;AC137621.2/17491-17729 39947:Oryza sativa Japonica
Group
Length = 239
Score = 44.1 bits (22), Expect = 4e-04
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 6 atactccctccgtcccaaaata 27
||||||||||||||||||||||
Sbjct: 1 atactccctccgtcccaaaata 22
>RF01058;MIR806;AAAA02014927.1/5775-5532 39946:Oryza sativa Indica
Group
Length = 244
Score = 44.1 bits (22), Expect = 4e-04
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 7 tactccctccgtcccaaaataa 28
||||||||||||||||||||||
Sbjct: 2 tactccctccgtcccaaaataa 23
>RF01058;MIR806;AACV01000175.1/175-418 39947:Oryza sativa Japonica
Group
Length = 244
Score = 44.1 bits (22), Expect = 4e-04
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 7 tactccctccgtcccaaaataa 28
||||||||||||||||||||||
Sbjct: 2 tactccctccgtcccaaaataa 23
>RF01058;MIR806;AAAA02015465.1/824-1069 39946:Oryza sativa Indica
Group
Length = 246
Score = 44.1 bits (22), Expect = 4e-04
Identities = 22/22 (100%)
Strand = Plus / Minus
Query: 7 tactccctccgtcccaaaataa 28
||||||||||||||||||||||
Sbjct: 245 tactccctccgtcccaaaataa 224
>RF01058;MIR806;AP004279.1/119207-118967 39947:Oryza sativa Japonica
Group
Length = 241
Score = 44.1 bits (22), Expect = 4e-04
Identities = 22/22 (100%)
Strand = Plus / Minus
Query: 7 tactccctccgtcccaaaataa 28
||||||||||||||||||||||
Sbjct: 240 tactccctccgtcccaaaataa 219
>RF01058;MIR806;AACV01020112.1/46634-46870 39947:Oryza sativa
Japonica Group
Length = 237
Score = 44.1 bits (22), Expect = 4e-04
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 7 tactccctccgtcccaaaataa 28
||||||||||||||||||||||
Sbjct: 2 tactccctccgtcccaaaataa 23
Score = 44.1 bits (22), Expect = 4e-04
Identities = 22/22 (100%)
Strand = Plus / Minus
Query: 7 tactccctccgtcccaaaataa 28
||||||||||||||||||||||
Sbjct: 236 tactccctccgtcccaaaataa 215
>RF01058;MIR806;AP008214.1/5532426-5532666 39947:Oryza sativa
Japonica Group
Length = 241
Score = 44.1 bits (22), Expect = 4e-04
Identities = 22/22 (100%)
Strand = Plus / Minus
Query: 7 tactccctccgtcccaaaataa 28
||||||||||||||||||||||
Sbjct: 240 tactccctccgtcccaaaataa 219
>RF01058;MIR806;AP004672.3/126730-126486 39947:Oryza sativa
Japonica Group
Length = 245
Score = 44.1 bits (22), Expect = 4e-04
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 7 tactccctccgtcccaaaataa 28
||||||||||||||||||||||
Sbjct: 2 tactccctccgtcccaaaataa 23
>RF01058;MIR806;AP008218.1/7228032-7227791 39947:Oryza sativa
Japonica Group
Length = 242
Score = 44.1 bits (22), Expect = 4e-04
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 6 atactccctccgtcccaaaata 27
||||||||||||||||||||||
Sbjct: 1 atactccctccgtcccaaaata 22
>RF01058;MIR806;AAAA02012959.1/2038-1794 39946:Oryza sativa Indica
Group
Length = 245
Score = 44.1 bits (22), Expect = 4e-04
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 7 tactccctccgtcccaaaataa 28
||||||||||||||||||||||
Sbjct: 2 tactccctccgtcccaaaataa 23
>RF01058;MIR806;AACV01005022.1/1990-2230 39947:Oryza sativa Japonica
Group
Length = 241
Score = 44.1 bits (22), Expect = 4e-04
Identities = 22/22 (100%)
Strand = Plus / Minus
Query: 7 tactccctccgtcccaaaataa 28
||||||||||||||||||||||
Sbjct: 240 tactccctccgtcccaaaataa 219
>RF01058;MIR806;AACV01010423.1/14473-14229 39947:Oryza sativa
Japonica Group
Length = 245
Score = 44.1 bits (22), Expect = 4e-04
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 6 atactccctccgtcccaaaata 27
||||||||||||||||||||||
Sbjct: 1 atactccctccgtcccaaaata 22
>RF01058;MIR806;AAAA02007955.1/54103-53859 39946:Oryza sativa
Indica Group
Length = 245
Score = 44.1 bits (22), Expect = 4e-04
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 7 tactccctccgtcccaaaataa 28
||||||||||||||||||||||
Sbjct: 2 tactccctccgtcccaaaataa 23
>RF00906;MIR1122;CR954190.2/110040-110176 3880:Medicago truncatula
(barrel medic)
Length = 137
Score = 44.1 bits (22), Expect = 4e-04
Identities = 22/22 (100%)
Strand = Plus / Minus
Query: 5 aatactccctccgtcccaaaat 26
||||||||||||||||||||||
Sbjct: 135 aatactccctccgtcccaaaat 114
>RF00906;MIR1122;AY491681.1/77211-77302 4568:Triticum monococcum
Length = 92
Score = 44.1 bits (22), Expect = 4e-04
Identities = 22/22 (100%)
Strand = Plus / Minus
Query: 6 atactccctccgtcccaaaata 27
||||||||||||||||||||||
Sbjct: 89 atactccctccgtcccaaaata 68
>RF00906;MIR1122;AB183299.1/312-404 4565:Triticum aestivum (bread
wheat)
Length = 93
Score = 44.1 bits (22), Expect = 4e-04
Identities = 25/26 (96%)
Strand = Plus / Plus
Query: 9 ctccctccgtcccaaaataattgtct 34
|||||||||||||||||||| |||||
Sbjct: 7 ctccctccgtcccaaaataagtgtct 32
>RF00906;MIR1122;AY485644.1/84291-84425 4568:Triticum monococcum
Length = 135
Score = 44.1 bits (22), Expect = 4e-04
Identities = 28/30 (93%)
Strand = Plus / Plus
Query: 7 tactccctccgtcccaaaataattgtctta 36
|||||||||||||||||||| ||||||||
Sbjct: 5 tactccctccgtcccaaaattgttgtctta 34
>RF00906;MIR1122;AJ507395.1/7785-7899 112509:Hordeum vulgare subsp.
vulgare (domesticated barley)
Length = 115
Score = 44.1 bits (22), Expect = 4e-04
Identities = 22/22 (100%)
Strand = Plus / Minus
Query: 7 tactccctccgtcccaaaataa 28
||||||||||||||||||||||
Sbjct: 111 tactccctccgtcccaaaataa 90
>RF00906;MIR1122;AF521177.1/27342-27466 4513:Hordeum vulgare
Length = 125
Score = 44.1 bits (22), Expect = 4e-04
Identities = 22/22 (100%)
Strand = Plus / Minus
Query: 6 atactccctccgtcccaaaata 27
||||||||||||||||||||||
Sbjct: 122 atactccctccgtcccaaaata 101
>RF00906;MIR1122;AF181455.1/3108-2994 4513:Hordeum vulgare
Length = 115
Score = 44.1 bits (22), Expect = 4e-04
Identities = 22/22 (100%)
Strand = Plus / Minus
Query: 7 tactccctccgtcccaaaataa 28
||||||||||||||||||||||
Sbjct: 111 tactccctccgtcccaaaataa 90
>RF00906;MIR1122;AF277239.1/1056-1190 37679:Heteranthelium
piliferum
Length = 135
Score = 44.1 bits (22), Expect = 4e-04
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 5 aatactccctccgtcccaaaat 26
||||||||||||||||||||||
Sbjct: 3 aatactccctccgtcccaaaat 24
Score = 44.1 bits (22), Expect = 4e-04
Identities = 22/22 (100%)
Strand = Plus / Minus
Query: 5 aatactccctccgtcccaaaat 26
||||||||||||||||||||||
Sbjct: 133 aatactccctccgtcccaaaat 112
>RF00906;MIR1122;AAAA02029963.1/5445-5312 39946:Oryza sativa Indica
Group
Length = 134
Score = 44.1 bits (22), Expect = 4e-04
Identities = 22/22 (100%)
Strand = Plus / Minus
Query: 6 atactccctccgtcccaaaata 27
||||||||||||||||||||||
Sbjct: 131 atactccctccgtcccaaaata 110
>RF00906;MIR1122;AAAA02022195.1/27114-27226 39946:Oryza sativa
Indica Group
Length = 113
Score = 44.1 bits (22), Expect = 4e-04
Identities = 22/22 (100%)
Strand = Plus / Minus
Query: 7 tactccctccgtcccaaaataa 28
||||||||||||||||||||||
Sbjct: 109 tactccctccgtcccaaaataa 88
>RF00906;MIR1122;AAAA02007259.1/4313-4455 39946:Oryza sativa
Indica Group
Length = 143
Score = 44.1 bits (22), Expect = 4e-04
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 6 atactccctccgtcccaaaata 27
||||||||||||||||||||||
Sbjct: 4 atactccctccgtcccaaaata 25
>RF00906;MIR1122;AAAA02003593.1/26423-26497 39946:Oryza sativa
Indica Group
Length = 75
Score = 44.1 bits (22), Expect = 4e-04
Identities = 22/22 (100%)
Strand = Plus / Minus
Query: 6 atactccctccgtcccaaaata 27
||||||||||||||||||||||
Sbjct: 72 atactccctccgtcccaaaata 51
>RF00906;MIR1122;FJ581044.1/175385-175266 4538:Oryza glaberrima
(African rice)
Length = 120
Score = 44.1 bits (22), Expect = 4e-04
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 7 tactccctccgtcccaaaataa 28
||||||||||||||||||||||
Sbjct: 5 tactccctccgtcccaaaataa 26
>RF00906;MIR1122;AC111016.2/25572-25452 39947:Oryza sativa Japonica
Group
Length = 121
Score = 44.1 bits (22), Expect = 4e-04
Identities = 22/22 (100%)
Strand = Plus / Minus
Query: 6 atactccctccgtcccaaaata 27
||||||||||||||||||||||
Sbjct: 118 atactccctccgtcccaaaata 97
>RF00906;MIR1122;AP004047.3/87830-87972 39947:Oryza sativa
Japonica Group
Length = 143
Score = 44.1 bits (22), Expect = 4e-04
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 6 atactccctccgtcccaaaata 27
||||||||||||||||||||||
Sbjct: 4 atactccctccgtcccaaaata 25
>RF00906;MIR1122;AC232160.1/3827-3951 63629:Oryza minuta
Length = 125
Score = 44.1 bits (22), Expect = 4e-04
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 6 atactccctccgtcccaaaata 27
||||||||||||||||||||||
Sbjct: 4 atactccctccgtcccaaaata 25
>RF00906;MIR1122;AAAA02020504.1/20392-20526 39946:Oryza sativa
Indica Group
Length = 135
Score = 44.1 bits (22), Expect = 4e-04
Identities = 22/22 (100%)
Strand = Plus / Minus
Query: 6 atactccctccgtcccaaaata 27
||||||||||||||||||||||
Sbjct: 132 atactccctccgtcccaaaata 111
>RF00906;MIR1122;AC226266.1/92361-92224 63629:Oryza minuta
Length = 138
Score = 44.1 bits (22), Expect = 4e-04
Identities = 22/22 (100%)
Strand = Plus / Minus
Query: 6 atactccctccgtcccaaaata 27
||||||||||||||||||||||
Sbjct: 135 atactccctccgtcccaaaata 114
>RF00906;MIR1122;AP008216.1/16569819-16569686 39947:Oryza sativa
Japonica Group
Length = 134
Score = 44.1 bits (22), Expect = 4e-04
Identities = 22/22 (100%)
Strand = Plus / Minus
Query: 6 atactccctccgtcccaaaata 27
||||||||||||||||||||||
Sbjct: 131 atactccctccgtcccaaaata 110
>RF00906;MIR1122;AC215820.3/114332-114188 4537:Oryza punctata
Length = 145
Score = 44.1 bits (22), Expect = 4e-04
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 6 atactccctccgtcccaaaata 27
||||||||||||||||||||||
Sbjct: 4 atactccctccgtcccaaaata 25
>RF00906;MIR1122;AP008218.1/2340117-2339983 39947:Oryza sativa
Japonica Group
Length = 135
Score = 44.1 bits (22), Expect = 4e-04
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 6 atactccctccgtcccaaaata 27
||||||||||||||||||||||
Sbjct: 4 atactccctccgtcccaaaata 25
>RF00906;MIR1122;AP008216.1/15579713-15579809 39947:Oryza sativa
Japonica Group
Length = 97
Score = 44.1 bits (22), Expect = 4e-04
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 7 tactccctccgtcccaaaataa 28
||||||||||||||||||||||
Sbjct: 5 tactccctccgtcccaaaataa 26
>RF00906;MIR1122;AC210491.1/95749-95858 4538:Oryza glaberrima
(African rice)
Length = 110
Score = 44.1 bits (22), Expect = 4e-04
Identities = 22/22 (100%)
Strand = Plus / Minus
Query: 6 atactccctccgtcccaaaata 27
||||||||||||||||||||||
Sbjct: 107 atactccctccgtcccaaaata 86
>RF00906;MIR1122;AP008212.1/25859487-25859353 39947:Oryza sativa
Japonica Group
Length = 135
Score = 44.1 bits (22), Expect = 4e-04
Identities = 22/22 (100%)
Strand = Plus / Minus
Query: 6 atactccctccgtcccaaaata 27
||||||||||||||||||||||
Sbjct: 132 atactccctccgtcccaaaata 111
>RF00906;MIR1122;AAAA02017235.1/6057-5946 39946:Oryza sativa
Indica Group
Length = 112
Score = 44.1 bits (22), Expect = 4e-04
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 6 atactccctccgtcccaaaata 27
||||||||||||||||||||||
Sbjct: 4 atactccctccgtcccaaaata 25
>RF00906;MIR1122;AC137999.2/12932-12822 39947:Oryza sativa
Japonica Group
Length = 111
Score = 44.1 bits (22), Expect = 4e-04
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 6 atactccctccgtcccaaaata 27
||||||||||||||||||||||
Sbjct: 4 atactccctccgtcccaaaata 25
>RF00906;MIR1122;AP008208.1/1166338-1166449 39947:Oryza sativa
Japonica Group
Length = 112
Score = 44.1 bits (22), Expect = 4e-04
Identities = 22/22 (100%)
Strand = Plus / Minus
Query: 6 atactccctccgtcccaaaata 27
||||||||||||||||||||||
Sbjct: 109 atactccctccgtcccaaaata 88
>RF00906;MIR1122;AACV01014374.1/13115-13004 39947:Oryza sativa
Japonica Group
Length = 112
Score = 44.1 bits (22), Expect = 4e-04
Identities = 22/22 (100%)
Strand = Plus / Minus
Query: 6 atactccctccgtcccaaaata 27
||||||||||||||||||||||
Sbjct: 109 atactccctccgtcccaaaata 88
>RF00906;MIR1122;AACV01023551.1/12075-12186 39947:Oryza sativa
Japonica Group
Length = 112
Score = 44.1 bits (22), Expect = 4e-04
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 6 atactccctccgtcccaaaata 27
||||||||||||||||||||||
Sbjct: 4 atactccctccgtcccaaaata 25
>RF00906;MIR1122;AP003760.4/5605-5476 39947:Oryza sativa Japonica
Group
Length = 130
Score = 44.1 bits (22), Expect = 4e-04
Identities = 22/22 (100%)
Strand = Plus / Minus
Query: 6 atactccctccgtcccaaaata 27
||||||||||||||||||||||
Sbjct: 127 atactccctccgtcccaaaata 106
>RF00906;MIR1122;AK288546.1/1340-1246 39947:Oryza sativa Japonica
Group
Length = 95
Score = 44.1 bits (22), Expect = 4e-04
Identities = 22/22 (100%)
Strand = Plus / Minus
Query: 6 atactccctccgtcccaaaata 27
||||||||||||||||||||||
Sbjct: 92 atactccctccgtcccaaaata 71
>RF00906;MIR1122;AACV01009606.1/13757-13637 39947:Oryza sativa
Japonica Group
Length = 121
Score = 44.1 bits (22), Expect = 4e-04
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 7 tactccctccgtcccaaaataa 28
||||||||||||||||||||||
Sbjct: 5 tactccctccgtcccaaaataa 26
>RF00906;MIR1122;AAAA02004295.1/15025-15180 39946:Oryza sativa
Indica Group
Length = 156
Score = 44.1 bits (22), Expect = 4e-04
Identities = 22/22 (100%)
Strand = Plus / Minus
Query: 6 atactccctccgtcccaaaata 27
||||||||||||||||||||||
Sbjct: 153 atactccctccgtcccaaaata 132
>RF00906;MIR1122;AAAA02006274.1/23456-23551 39946:Oryza sativa
Indica Group
Length = 96
Score = 44.1 bits (22), Expect = 4e-04
Identities = 22/22 (100%)
Strand = Plus / Minus
Query: 6 atactccctccgtcccaaaata 27
||||||||||||||||||||||
Sbjct: 93 atactccctccgtcccaaaata 72
>RF00906;MIR1122;AC229754.2/94242-94126 63629:Oryza minuta
Length = 117
Score = 44.1 bits (22), Expect = 4e-04
Identities = 22/22 (100%)
Strand = Plus / Minus
Query: 7 tactccctccgtcccaaaataa 28
||||||||||||||||||||||
Sbjct: 113 tactccctccgtcccaaaataa 92
>RF00906;MIR1122;AP005421.3/127890-127779 39947:Oryza sativa
Japonica Group
Length = 112
Score = 44.1 bits (22), Expect = 4e-04
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 6 atactccctccgtcccaaaata 27
||||||||||||||||||||||
Sbjct: 4 atactccctccgtcccaaaata 25
>RF00906;MIR1122;AP003883.3/40264-40104 39947:Oryza sativa
Japonica Group
Length = 161
Score = 44.1 bits (22), Expect = 4e-04
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 6 atactccctccgtcccaaaata 27
||||||||||||||||||||||
Sbjct: 4 atactccctccgtcccaaaata 25
>RF00906;MIR1122;AP008215.1/19940245-19940356 39947:Oryza sativa
Japonica Group
Length = 112
Score = 44.1 bits (22), Expect = 4e-04
Identities = 22/22 (100%)
Strand = Plus / Minus
Query: 6 atactccctccgtcccaaaata 27
||||||||||||||||||||||
Sbjct: 109 atactccctccgtcccaaaata 88
>RF00906;MIR1122;AL831796.5/20323-20408 4530:Oryza sativa (rice)
Length = 86
Score = 44.1 bits (22), Expect = 4e-04
Identities = 22/22 (100%)
Strand = Plus / Minus
Query: 6 atactccctccgtcccaaaata 27
||||||||||||||||||||||
Sbjct: 83 atactccctccgtcccaaaata 62
>RF00906;MIR1122;AL662938.3/6940-7051 39947:Oryza sativa Japonica
Group
Length = 112
Score = 44.1 bits (22), Expect = 4e-04
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 5 aatactccctccgtcccaaaat 26
||||||||||||||||||||||
Sbjct: 3 aatactccctccgtcccaaaat 24
>RF00906;MIR1122;AACV01013954.1/10702-10856 39947:Oryza sativa
Japonica Group
Length = 155
Score = 44.1 bits (22), Expect = 4e-04
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 6 atactccctccgtcccaaaata 27
||||||||||||||||||||||
Sbjct: 4 atactccctccgtcccaaaata 25
>RF00906;MIR1122;AP008215.1/18970521-18970611 39947:Oryza sativa
Japonica Group
Length = 91
Score = 44.1 bits (22), Expect = 4e-04
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 6 atactccctccgtcccaaaata 27
||||||||||||||||||||||
Sbjct: 4 atactccctccgtcccaaaata 25
>RF00906;MIR1122;AP003381.3/77030-76947 39947:Oryza sativa
Japonica Group
Length = 84
Score = 44.1 bits (22), Expect = 4e-04
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 6 atactccctccgtcccaaaata 27
||||||||||||||||||||||
Sbjct: 4 atactccctccgtcccaaaata 25
>RF00906;MIR1122;AP008212.1/6831401-6831305 39947:Oryza sativa
Japonica Group
Length = 97
Score = 44.1 bits (22), Expect = 4e-04
Identities = 22/22 (100%)
Strand = Plus / Minus
Query: 7 tactccctccgtcccaaaataa 28
||||||||||||||||||||||
Sbjct: 93 tactccctccgtcccaaaataa 72
>RF00906;MIR1122;AACV01018660.1/8916-9023 39947:Oryza sativa
Japonica Group
Length = 108
Score = 44.1 bits (22), Expect = 4e-04
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 5 aatactccctccgtcccaaaat 26
||||||||||||||||||||||
Sbjct: 3 aatactccctccgtcccaaaat 24
>RF00906;MIR1122;AC093953.2/44822-44955 39947:Oryza sativa Japonica
Group
Length = 134
Score = 44.1 bits (22), Expect = 4e-04
Identities = 22/22 (100%)
Strand = Plus / Minus
Query: 6 atactccctccgtcccaaaata 27
||||||||||||||||||||||
Sbjct: 131 atactccctccgtcccaaaata 110
>RF00906;MIR1122;AACV01001520.1/25871-25960 39947:Oryza sativa
Japonica Group
Length = 90
Score = 44.1 bits (22), Expect = 4e-04
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 7 tactccctccgtcccaaaataa 28
||||||||||||||||||||||
Sbjct: 5 tactccctccgtcccaaaataa 26
>RF00906;MIR1122;AK288180.1/1387-1262 39947:Oryza sativa Japonica
Group
Length = 126
Score = 44.1 bits (22), Expect = 4e-04
Identities = 22/22 (100%)
Strand = Plus / Minus
Query: 6 atactccctccgtcccaaaata 27
||||||||||||||||||||||
Sbjct: 123 atactccctccgtcccaaaata 102
>RF00906;MIR1122;AAAA02006222.1/38105-37993 39946:Oryza sativa
Indica Group
Length = 113
Score = 44.1 bits (22), Expect = 4e-04
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 7 tactccctccgtcccaaaataa 28
||||||||||||||||||||||
Sbjct: 5 tactccctccgtcccaaaataa 26
>RF00906;MIR1122;AP008207.1/24395058-24395107 39947:Oryza sativa
Japonica Group
Length = 50
Score = 44.1 bits (22), Expect = 4e-04
Identities = 22/22 (100%)
Strand = Plus / Minus
Query: 6 atactccctccgtcccaaaata 27
||||||||||||||||||||||
Sbjct: 47 atactccctccgtcccaaaata 26
>RF00906;MIR1122;AC121366.4/55476-55582 39947:Oryza sativa
Japonica Group
Length = 107
Score = 44.1 bits (22), Expect = 4e-04
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 6 atactccctccgtcccaaaata 27
||||||||||||||||||||||
Sbjct: 4 atactccctccgtcccaaaata 25
