miRNEST 2.0, an integrative microRNA resource :: BLAST
BLASTN 2.2.20 [Feb-08-2009]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
>RF00906;MIR1122;EU282239.1/1196-1300 52152:Elymus repens
Length = 105
Score = 157 bits (79), Expect = 4e-38
Identities = 94/99 (94%)
Strand = Plus / Minus
Query: 11 ctactccctccgtcccaaaataagtgtctcaactttgtactagctctagtacaaagttgt 70
||||||||||||||||||||||| ||||||||||||||| || || ||||||||||||||
Sbjct: 102 ctactccctccgtcccaaaataaatgtctcaactttgtattaactttagtacaaagttgt 43
Query: 71 actaagcttgagacacttattttgcgacggagggagtat 109
|||||||||||||||||||||||| ||||||||||||||
Sbjct: 42 actaagcttgagacacttattttgggacggagggagtat 4
Score = 61.9 bits (31), Expect = 2e-09
Identities = 31/31 (100%)
Strand = Plus / Plus
Query: 12 tactccctccgtcccaaaataagtgtctcaa 42
|||||||||||||||||||||||||||||||
Sbjct: 5 tactccctccgtcccaaaataagtgtctcaa 35
>RF00906;MIR1122;EU282755.1/953-849 112509:Hordeum vulgare subsp.
vulgare (domesticated barley)
Length = 105
Score = 153 bits (77), Expect = 6e-37
Identities = 92/97 (94%)
Strand = Plus / Minus
Query: 12 tactccctccgtcccaaaataagtgtctcaactttgtactagctctagtacaaagttgta 71
|||||||||||||||||||||||||||||||||||||||||||| ||||||||| || |
Sbjct: 101 tactccctccgtcccaaaataagtgtctcaactttgtactagctgtagtacaaaattaca 42
Query: 72 ctaagcttgagacacttattttgcgacggagggagta 108
||||||||||||||||||||||| |||||||||||||
Sbjct: 41 ctaagcttgagacacttattttgggacggagggagta 5
Score = 61.9 bits (31), Expect = 2e-09
Identities = 31/31 (100%)
Strand = Plus / Plus
Query: 12 tactccctccgtcccaaaataagtgtctcaa 42
|||||||||||||||||||||||||||||||
Sbjct: 5 tactccctccgtcccaaaataagtgtctcaa 35
Score = 56.0 bits (28), Expect = 1e-07
Identities = 31/32 (96%)
Strand = Plus / Plus
Query: 78 ttgagacacttattttgcgacggagggagtat 109
||||||||||||||||| ||||||||||||||
Sbjct: 71 ttgagacacttattttgggacggagggagtat 102
>RF00906;MIR1122;FJ236275.1/674-570 4573:Aegilops speltoides
Length = 105
Score = 153 bits (77), Expect = 6e-37
Identities = 92/97 (94%)
Strand = Plus / Minus
Query: 12 tactccctccgtcccaaaataagtgtctcaactttgtactagctctagtacaaagttgta 71
|||||||||||||||||||||||||||| |||||||||||| || |||||||||||||||
Sbjct: 101 tactccctccgtcccaaaataagtgtcttaactttgtactaactttagtacaaagttgta 42
Query: 72 ctaagcttgagacacttattttgcgacggagggagta 108
||| ||||||||||||||||||| |||||||||||||
Sbjct: 41 ctaggcttgagacacttattttgagacggagggagta 5
Score = 54.0 bits (27), Expect = 4e-07
Identities = 30/31 (96%)
Strand = Plus / Plus
Query: 12 tactccctccgtcccaaaataagtgtctcaa 42
||||||||||||| |||||||||||||||||
Sbjct: 5 tactccctccgtctcaaaataagtgtctcaa 35
Score = 48.1 bits (24), Expect = 3e-05
Identities = 27/28 (96%)
Strand = Plus / Plus
Query: 81 agacacttattttgcgacggagggagta 108
|||||||||||||| |||||||||||||
Sbjct: 74 agacacttattttgggacggagggagta 101
>RF00906;MIR1122;DQ445236.1/13423-13319 112509:Hordeum vulgare
subsp. vulgare (domesticated barley)
Length = 105
Score = 149 bits (75), Expect = 1e-35
Identities = 93/99 (93%)
Strand = Plus / Plus
Query: 12 tactccctccgtcccaaaataagtgtctcaactttgtactagctctagtacaaagttgta 71
|||||||||||| |||||||||||||||||| ||||||||||||||||||||||||||||
Sbjct: 5 tactccctccgttccaaaataagtgtctcaaatttgtactagctctagtacaaagttgta 64
Query: 72 ctaagcttgagacacttattttgcgacggagggagtatt 110
|||||||||||| | |||||||| ||||||||||||||
Sbjct: 65 ctaagcttgagatagttattttggaacggagggagtatt 103
Score = 48.1 bits (24), Expect = 3e-05
Identities = 30/32 (93%)
Strand = Plus / Minus
Query: 78 ttgagacacttattttgcgacggagggagtat 109
||||||||||||||||| |||||||||||||
Sbjct: 35 ttgagacacttattttggaacggagggagtat 4
>RF00906;MIR1122;EU282250.1/1190-1294 52152:Elymus repens
Length = 105
Score = 149 bits (75), Expect = 1e-35
Identities = 93/99 (93%)
Strand = Plus / Minus
Query: 11 ctactccctccgtcccaaaataagtgtctcaactttgtactagctctagtacaaagttgt 70
||||||||||||||||||||||| ||||||||||||||| || || |||||||| |||||
Sbjct: 102 ctactccctccgtcccaaaataaatgtctcaactttgtattaactttagtacaaggttgt 43
Query: 71 actaagcttgagacacttattttgcgacggagggagtat 109
|||||||||||||||||||||||| ||||||||||||||
Sbjct: 42 actaagcttgagacacttattttgggacggagggagtat 4
Score = 61.9 bits (31), Expect = 2e-09
Identities = 31/31 (100%)
Strand = Plus / Plus
Query: 12 tactccctccgtcccaaaataagtgtctcaa 42
|||||||||||||||||||||||||||||||
Sbjct: 5 tactccctccgtcccaaaataagtgtctcaa 35
>RF00906;MIR1122;AF474373.1/50497-50394 112509:Hordeum vulgare
subsp. vulgare (domesticated barley)
Length = 104
Score = 143 bits (72), Expect = 6e-34
Identities = 94/100 (94%), Gaps = 1/100 (1%)
Strand = Plus / Minus
Query: 11 ctactccctccgtcccaaaataagtgtctcaactttgtactagctctagtacaaagttgt 70
||||||||||| ||||||||||||||||||||||||||||||| ||||||||||||||||
Sbjct: 101 ctactccctcc-tcccaaaataagtgtctcaactttgtactagttctagtacaaagttgt 43
Query: 71 actaagcttgagacacttattttgcgacggagggagtatt 110
|||| |||||||||| |||||||| ||||||| |||||||
Sbjct: 42 actaggcttgagacagttattttgggacggagtgagtatt 3
Score = 46.1 bits (23), Expect = 1e-04
Identities = 29/31 (93%)
Strand = Plus / Plus
Query: 12 tactccctccgtcccaaaataagtgtctcaa 42
||||| |||||||||||||||| ||||||||
Sbjct: 5 tactcactccgtcccaaaataactgtctcaa 35
Score = 44.1 bits (22), Expect = 4e-04
Identities = 28/30 (93%)
Strand = Plus / Plus
Query: 40 caactttgtactagctctagtacaaagttg 69
|||||||||||||| ||||||||||||||
Sbjct: 44 caactttgtactagaactagtacaaagttg 73
>RF00906;MIR1122;DQ871219.1/106890-106994 85692:Triticum turgidum
subsp. dicoccoides
Length = 105
Score = 141 bits (71), Expect = 2e-33
Identities = 92/99 (92%)
Strand = Plus / Minus
Query: 12 tactccctccgtcccaaaataagtgtctcaactttgtactagctctagtacaaagttgta 71
|||||||||| |||||||||||||||||||||||||||||| |||||||||||| || ||
Sbjct: 101 tactccctccatcccaaaataagtgtctcaactttgtactatctctagtacaaattttta 42
Query: 72 ctaagcttgagacacttattttgcgacggagggagtatt 110
||||||| |||||||||||||| |||||||||||||||
Sbjct: 41 ctaagctcaagacacttattttgggacggagggagtatt 3
Score = 56.0 bits (28), Expect = 1e-07
Identities = 28/28 (100%)
Strand = Plus / Plus
Query: 12 tactccctccgtcccaaaataagtgtct 39
||||||||||||||||||||||||||||
Sbjct: 5 tactccctccgtcccaaaataagtgtct 32
Score = 46.1 bits (23), Expect = 1e-04
Identities = 29/31 (93%)
Strand = Plus / Plus
Query: 78 ttgagacacttattttgcgacggagggagta 108
||||||||||||||||| || ||||||||||
Sbjct: 71 ttgagacacttattttgggatggagggagta 101
>RF00906;MIR1122;DQ995510.1/1615-1718 4513:Hordeum vulgare
Length = 104
Score = 141 bits (71), Expect = 2e-33
Identities = 93/99 (93%), Gaps = 1/99 (1%)
Strand = Plus / Minus
Query: 12 tactccctccgtcccaaaataagtgtctcaactttgtactagctctagtacaaagttgta 71
|||||||||| ||||||||||| |||||||||||||||||||||||||||||||||||||
Sbjct: 100 tactccctccatcccaaaataactgtctcaactttgtactagctctagtacaaagttgta 41
Query: 72 ctaagcttgagacacttattttgcgacggagggagtatt 110
| ||| |||||||| |||||||| |||||||||||||||
Sbjct: 40 caaag-ttgagacagttattttgagacggagggagtatt 3
Score = 61.9 bits (31), Expect = 2e-09
Identities = 37/39 (94%)
Strand = Plus / Plus
Query: 12 tactccctccgtcccaaaataagtgtctcaactttgtac 50
||||||||||||| |||||||| ||||||||||||||||
Sbjct: 5 tactccctccgtctcaaaataactgtctcaactttgtac 43
Score = 44.1 bits (22), Expect = 4e-04
Identities = 28/30 (93%)
Strand = Plus / Plus
Query: 40 caactttgtactagctctagtacaaagttg 69
|||||||||||||| ||||||||||||||
Sbjct: 43 caactttgtactagagctagtacaaagttg 72
>RF00906;MIR1122;AJ400714.1/3663-3767 4565:Triticum aestivum (bread
wheat)
Length = 105
Score = 139 bits (70), Expect = 9e-33
Identities = 91/98 (92%)
Strand = Plus / Plus
Query: 12 tactccctccgtcccaaaataagtgtctcaactttgtactagctctagtacaaagttgta 71
|||||| |||||||||||||||||||||||| ||| |||| ||||||||||||||||||
Sbjct: 5 tactccttccgtcccaaaataagtgtctcaattttacactaactctagtacaaagttgta 64
Query: 72 ctaagcttgagacacttattttgcgacggagggagtat 109
||||| ||||||||||||||||| ||||||||||||||
Sbjct: 65 ctaaggttgagacacttattttgggacggagggagtat 102
Score = 63.9 bits (32), Expect = 4e-10
Identities = 32/32 (100%)
Strand = Plus / Minus
Query: 12 tactccctccgtcccaaaataagtgtctcaac 43
||||||||||||||||||||||||||||||||
Sbjct: 101 tactccctccgtcccaaaataagtgtctcaac 70
Score = 46.1 bits (23), Expect = 1e-04
Identities = 29/31 (93%)
Strand = Plus / Minus
Query: 78 ttgagacacttattttgcgacggagggagta 108
||||||||||||||||| |||||| ||||||
Sbjct: 35 ttgagacacttattttgggacggaaggagta 5
>RF00906;MIR1122;FJ184990.1/3303-3406 4565:Triticum aestivum (bread
wheat)
Length = 104
Score = 139 bits (70), Expect = 9e-33
Identities = 92/98 (93%), Gaps = 1/98 (1%)
Strand = Plus / Minus
Query: 12 tactccctccgtcccaaaataagtgtctcaactttgtactagctctagtacaaagttgta 71
|||||||||||||||||||||||||||||| |||||||||| |||||||| ||| |||||
Sbjct: 100 tactccctccgtcccaaaataagtgtctca-ctttgtactaactctagtataaaattgta 42
Query: 72 ctaagcttgagacacttattttgcgacggagggagtat 109
||||| ||||||||||||||||| ||||||||||||||
Sbjct: 41 ctaaggttgagacacttattttgggacggagggagtat 4
Score = 63.9 bits (32), Expect = 4e-10
Identities = 32/32 (100%)
Strand = Plus / Plus
Query: 12 tactccctccgtcccaaaataagtgtctcaac 43
||||||||||||||||||||||||||||||||
Sbjct: 5 tactccctccgtcccaaaataagtgtctcaac 36
Score = 56.0 bits (28), Expect = 1e-07
Identities = 31/32 (96%)
Strand = Plus / Plus
Query: 79 tgagacacttattttgcgacggagggagtatt 110
|||||||||||||||| |||||||||||||||
Sbjct: 71 tgagacacttattttgggacggagggagtatt 102
>RF00906;MIR1122;AY133251.1/901-1005 112509:Hordeum vulgare subsp.
vulgare (domesticated barley)
Length = 105
Score = 139 bits (70), Expect = 9e-33
Identities = 91/98 (92%)
Strand = Plus / Minus
Query: 12 tactccctccgtcccaaaataagtgtctcaactttgtactagctctagtacaaagttgta 71
|||||||||||||||||||||| ||||||||||||||||||||||||||||||| |||||
Sbjct: 101 tactccctccgtcccaaaataactgtctcaactttgtactagctctagtacaaaattgta 42
Query: 72 ctaagcttgagacacttattttgcgacggagggagtat 109
||| ||| |||||||||||||| |||||||||||||
Sbjct: 41 ctacgctcaagacacttattttggaacggagggagtat 4
Score = 48.1 bits (24), Expect = 3e-05
Identities = 27/28 (96%)
Strand = Plus / Plus
Query: 12 tactccctccgtcccaaaataagtgtct 39
|||||||||||| |||||||||||||||
Sbjct: 5 tactccctccgttccaaaataagtgtct 32
Score = 46.1 bits (23), Expect = 1e-04
Identities = 29/31 (93%)
Strand = Plus / Plus
Query: 78 ttgagacacttattttgcgacggagggagta 108
|||||||| |||||||| |||||||||||||
Sbjct: 71 ttgagacagttattttgggacggagggagta 101
>RF00906;MIR1122;X83518.1/7301-7197 4513:Hordeum vulgare
Length = 105
Score = 139 bits (70), Expect = 9e-33
Identities = 91/98 (92%)
Strand = Plus / Minus
Query: 12 tactccctccgtcccaaaataagtgtctcaactttgtactagctctagtacaaagttgta 71
||||||||| | |||||||||||||||||||||||||||||||||| ||||||||||||
Sbjct: 101 tactccctctcttccaaaataagtgtctcaactttgtactagctctactacaaagttgta 42
Query: 72 ctaagcttgagacacttattttgcgacggagggagtat 109
|||||||||||||| |||||||| || |||||||||||
Sbjct: 41 ctaagcttgagacagttattttgagatggagggagtat 4
>RF00906;MIR1122;AJ249141.1/1014-910 4513:Hordeum vulgare
Length = 105
Score = 131 bits (66), Expect = 2e-30
Identities = 78/82 (95%)
Strand = Plus / Minus
Query: 12 tactccctccgtcccaaaataagtgtctcaactttgtactagctctagtacaaagttgta 71
||||||||||||| |||||||| ||||||||||||||| |||||||||||||||||||||
Sbjct: 101 tactccctccgtctcaaaataactgtctcaactttgtattagctctagtacaaagttgta 42
Query: 72 ctaagcttgagacacttatttt 93
|||||||| |||||||||||||
Sbjct: 41 ctaagcttaagacacttatttt 20
Score = 48.1 bits (24), Expect = 3e-05
Identities = 30/32 (93%)
Strand = Plus / Plus
Query: 78 ttgagacacttattttgcgacggagggagtat 109
|||||||| |||||||| ||||||||||||||
Sbjct: 71 ttgagacagttattttgagacggagggagtat 102
>RF00906;MIR1122;AJ234485.1/114-218 4513:Hordeum vulgare
Length = 105
Score = 131 bits (66), Expect = 2e-30
Identities = 90/98 (91%)
Strand = Plus / Minus
Query: 11 ctactccctccgtcccaaaataagtgtctcaactttgtactagctctagtacaaagttgt 70
|||||||||| ||| |||||||| ||||||||| ||||||||||||||||||||| ||||
Sbjct: 102 ctactccctctgtctcaaaataactgtctcaacattgtactagctctagtacaaaattgt 43
Query: 71 actaagcttgagacacttattttgcgacggagggagta 108
|||||| || |||||||||||||| |||||||||||||
Sbjct: 42 actaagattaagacacttattttgagacggagggagta 5
Score = 48.1 bits (24), Expect = 3e-05
Identities = 27/28 (96%)
Strand = Plus / Plus
Query: 12 tactccctccgtcccaaaataagtgtct 39
||||||||||||| ||||||||||||||
Sbjct: 5 tactccctccgtctcaaaataagtgtct 32
>RF00906;MIR1122;AK249560.1/988-1092 112509:Hordeum vulgare subsp.
vulgare (domesticated barley)
Length = 105
Score = 129 bits (65), Expect = 9e-30
Identities = 89/97 (91%)
Strand = Plus / Plus
Query: 12 tactccctccgtcccaaaataagtgtctcaactttgtactagctctagtacaaagttgta 71
|||||| |||||||||||||||||||||||||||| |||||||| ||||||||| |||||
Sbjct: 5 tactccatccgtcccaaaataagtgtctcaactttatactagctatagtacaaacttgta 64
Query: 72 ctaagcttgagacacttattttgcgacggagggagta 108
|||| |||||||| |||||||| |||||||||||||
Sbjct: 65 ttaagtttgagacagttattttgggacggagggagta 101
Score = 54.0 bits (27), Expect = 4e-07
Identities = 30/31 (96%)
Strand = Plus / Minus
Query: 12 tactccctccgtcccaaaataagtgtctcaa 42
|||||||||||||||||||||| ||||||||
Sbjct: 101 tactccctccgtcccaaaataactgtctcaa 71
Score = 48.1 bits (24), Expect = 3e-05
Identities = 30/32 (93%)
Strand = Plus / Minus
Query: 78 ttgagacacttattttgcgacggagggagtat 109
||||||||||||||||| |||||| |||||||
Sbjct: 35 ttgagacacttattttgggacggatggagtat 4
>RF00906;MIR1122;AF521177.1/206122-206018 4513:Hordeum vulgare
Length = 105
Score = 127 bits (64), Expect = 4e-29
Identities = 91/100 (91%)
Strand = Plus / Minus
Query: 11 ctactccctccgtcccaaaataagtgtctcaactttgtactagctctagtacaaagttgt 70
||||||||||||| |||||||| ||||||||||||||||||||||||||||||||||||
Sbjct: 102 ctactccctccgtttcaaaataaatgtctcaactttgtactagctctagtacaaagttgt 43
Query: 71 actaagcttgagacacttattttgcgacggagggagtatt 110
||||||| ||| ||| |||||||| | ||||||||||||
Sbjct: 42 actaagcatgaaacaattattttgaaatggagggagtatt 3
Score = 44.1 bits (22), Expect = 4e-04
Identities = 28/30 (93%)
Strand = Plus / Plus
Query: 40 caactttgtactagctctagtacaaagttg 69
|||||||||||||| ||||||||||||||
Sbjct: 44 caactttgtactagagctagtacaaagttg 73
>RF00906;MIR1122;DQ901436.1/1229-1333 4565:Triticum aestivum (bread
wheat)
Length = 105
Score = 125 bits (63), Expect = 1e-28
Identities = 87/95 (91%)
Strand = Plus / Plus
Query: 14 ctccctccgtcccaaaataagtgtctcaactttgtactagctctagtacaaagttgtact 73
|||||||||||||||||||||||||||||||||||||||||| || ||||||||||||||
Sbjct: 7 ctccctccgtcccaaaataagtgtctcaactttgtactagctttaatacaaagttgtact 66
Query: 74 aagcttgagacacttattttgcgacggagggagta 108
| ||||||||||||||||| || |||| |||||
Sbjct: 67 agagttgagacacttattttgagatggagtgagta 101
Score = 50.1 bits (25), Expect = 7e-06
Identities = 28/29 (96%)
Strand = Plus / Minus
Query: 78 ttgagacacttattttgcgacggagggag 106
||||||||||||||||| |||||||||||
Sbjct: 35 ttgagacacttattttgggacggagggag 7
>RF00906;MIR1122;EU282771.1/632-528 112509:Hordeum vulgare subsp.
vulgare (domesticated barley)
Length = 105
Score = 123 bits (62), Expect = 5e-28
Identities = 89/98 (90%)
Strand = Plus / Minus
Query: 11 ctactccctccgtcccaaaataagtgtctcaactttgtactagctctagtacaaagttgt 70
|||||||||||||| |||||||||| |||||||||| ||||||||||||| ||||||||
Sbjct: 102 ctactccctccgtctcaaaataagtatctcaactttacactagctctagtataaagttgt 43
Query: 71 actaagcttgagacacttattttgcgacggagggagta 108
|||||| |||||| | |||||||| |||||||||||||
Sbjct: 42 actaagtttgagaaagttattttgggacggagggagta 5
Score = 46.1 bits (23), Expect = 1e-04
Identities = 29/31 (93%)
Strand = Plus / Plus
Query: 12 tactccctccgtcccaaaataagtgtctcaa 42
|||||||||||||||||||||| | ||||||
Sbjct: 5 tactccctccgtcccaaaataactttctcaa 35
Score = 46.1 bits (23), Expect = 1e-04
Identities = 29/31 (93%)
Strand = Plus / Plus
Query: 78 ttgagacacttattttgcgacggagggagta 108
|||||| |||||||||| |||||||||||||
Sbjct: 71 ttgagatacttattttgagacggagggagta 101
>RF00906;MIR1122;EU593539.1/914-1018 4513:Hordeum vulgare
Length = 105
Score = 121 bits (61), Expect = 2e-27
Identities = 88/97 (90%)
Strand = Plus / Minus
Query: 12 tactccctccgtcccaaaataagtgtctcaactttgtactagctctagtacaaagttgta 71
|||||||||||||||||||||| |||||||||||| |||||| ||||||| ||| || ||
Sbjct: 101 tactccctccgtcccaaaataactgtctcaactttatactagatctagtataaatttata 42
Query: 72 ctaagcttgagacacttattttgcgacggagggagta 108
|||||||| ||||| |||||||| |||||||||||||
Sbjct: 41 ctaagcttaagacagttattttgggacggagggagta 5
Score = 50.1 bits (25), Expect = 7e-06
Identities = 31/33 (93%)
Strand = Plus / Plus
Query: 78 ttgagacacttattttgcgacggagggagtatt 110
|||||||| |||||||| |||||||||||||||
Sbjct: 71 ttgagacagttattttgggacggagggagtatt 103
Score = 48.1 bits (24), Expect = 3e-05
Identities = 27/28 (96%)
Strand = Plus / Plus
Query: 12 tactccctccgtcccaaaataagtgtct 39
|||||||||||||||||||||| |||||
Sbjct: 5 tactccctccgtcccaaaataactgtct 32
>RF00906;MIR1122;EU282768.1/632-528 112509:Hordeum vulgare subsp.
vulgare (domesticated barley)
Length = 105
Score = 115 bits (58), Expect = 1e-25
Identities = 88/98 (89%)
Strand = Plus / Minus
Query: 11 ctactccctccgtcccaaaataagtgtctcaactttgtactagctctagtacaaagttgt 70
|||||||||||||| |||||||||| ||||| |||| ||||||||||||| ||||||||
Sbjct: 102 ctactccctccgtctcaaaataagtatctcagctttacactagctctagtataaagttgt 43
Query: 71 actaagcttgagacacttattttgcgacggagggagta 108
|||||| |||||| | |||||||| |||||||||||||
Sbjct: 42 actaagtttgagaaagttattttgggacggagggagta 5
Score = 46.1 bits (23), Expect = 1e-04
Identities = 29/31 (93%)
Strand = Plus / Plus
Query: 12 tactccctccgtcccaaaataagtgtctcaa 42
|||||||||||||||||||||| | ||||||
Sbjct: 5 tactccctccgtcccaaaataactttctcaa 35
Score = 44.1 bits (22), Expect = 4e-04
Identities = 28/30 (93%)
Strand = Plus / Plus
Query: 79 tgagacacttattttgcgacggagggagta 108
||||| |||||||||| |||||||||||||
Sbjct: 72 tgagatacttattttgagacggagggagta 101
>RF00906;MIR1122;AK252392.1/1279-1175 112509:Hordeum vulgare subsp.
vulgare (domesticated barley)
Length = 105
Score = 115 bits (58), Expect = 1e-25
Identities = 88/98 (89%)
Strand = Plus / Minus
Query: 12 tactccctccgtcccaaaataagtgtctcaactttgtactagctctagtacaaagttgta 71
||||||||||||||||||||| ||||| |||||||||||||||| ||| ||| |||||
Sbjct: 101 tactccctccgtcccaaaatatctgtcttaactttgtactagctcatgtataaaattgta 42
Query: 72 ctaagcttgagacacttattttgcgacggagggagtat 109
|||||||| |||||||||||||| ||||||||| ||||
Sbjct: 41 ctaagcttaagacacttattttgggacggagggggtat 4
Score = 48.1 bits (24), Expect = 3e-05
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 16 ccctccgtcccaaaataagtgtct 39
||||||||||||||||||||||||
Sbjct: 9 ccctccgtcccaaaataagtgtct 32
>RF00906;MIR1122;AY943294.1/62260-62364 112509:Hordeum vulgare
subsp. vulgare (domesticated barley)
Length = 105
Score = 113 bits (57), Expect = 5e-25
Identities = 87/97 (89%)
Strand = Plus / Minus
Query: 12 tactccctccgtcccaaaataagtgtctcaactttgtactagctctagtacaaagttgta 71
|||| ||||||||||||||||| ||||||||||||||| ||| | ||||||||| |||||
Sbjct: 101 tacttcctccgtcccaaaataactgtctcaactttgtattagatttagtacaaaattgta 42
Query: 72 ctaagcttgagacacttattttgcgacggagggagta 108
||||||| |||||||||||||| ||||||||||||
Sbjct: 41 ttaagcttaagacacttattttggaacggagggagta 5
Score = 56.0 bits (28), Expect = 1e-07
Identities = 31/32 (96%)
Strand = Plus / Plus
Query: 8 atgctactccctccgtcccaaaataagtgtct 39
|||||||||||||||| |||||||||||||||
Sbjct: 1 atgctactccctccgttccaaaataagtgtct 32
>RF00906;MIR1122;DQ445238.1/5626-5730 112509:Hordeum vulgare subsp.
vulgare (domesticated barley)
Length = 105
Score = 113 bits (57), Expect = 5e-25
Identities = 87/97 (89%)
Strand = Plus / Minus
Query: 12 tactccctccgtcccaaaataagtgtctcaactttgtactagctctagtacaaagttgta 71
|||||||||||||||||||||| |||||||||||| |||||| |||| || ||| || ||
Sbjct: 101 tactccctccgtcccaaaataactgtctcaactttatactagatctaatataaatttata 42
Query: 72 ctaagcttgagacacttattttgcgacggagggagta 108
|||||||| ||||| |||||||| |||||||||||||
Sbjct: 41 ctaagcttaagacagttattttgggacggagggagta 5
Score = 50.1 bits (25), Expect = 7e-06
Identities = 31/33 (93%)
Strand = Plus / Plus
Query: 78 ttgagacacttattttgcgacggagggagtatt 110
|||||||| |||||||| |||||||||||||||
Sbjct: 71 ttgagacagttattttgggacggagggagtatt 103
Score = 48.1 bits (24), Expect = 3e-05
Identities = 27/28 (96%)
Strand = Plus / Plus
Query: 12 tactccctccgtcccaaaataagtgtct 39
|||||||||||||||||||||| |||||
Sbjct: 5 tactccctccgtcccaaaataactgtct 32
>RF00906;MIR1122;DQ175992.1/50-154 112509:Hordeum vulgare subsp.
vulgare (domesticated barley)
Length = 105
Score = 109 bits (55), Expect = 8e-24
Identities = 76/83 (91%)
Strand = Plus / Minus
Query: 11 ctactccctccgtcccaaaataagtgtctcaactttgtactagctctagtacaaagttgt 70
||||||||||||||||||||||| ||||| |||||||| |||||||||||| ||| || |
Sbjct: 102 ctactccctccgtcccaaaataattgtcttaactttgttctagctctagtataaaattat 43
Query: 71 actaagcttgagacacttatttt 93
||||||||| |||||||||||||
Sbjct: 42 actaagcttaagacacttatttt 20
>RF00906;MIR1122;AY821694.1/1308-1197 37674:Crithopsis delileana
Length = 112
Score = 109 bits (55), Expect = 8e-24
Identities = 64/67 (95%)
Strand = Plus / Minus
Query: 12 tactccctccgtcccaaaataagtgtctcaactttgtactagctctagtacaaagttgta 71
|||||||||| |||||||||||||||||||||||||||||| || |||||||||||||||
Sbjct: 108 tactccctccatcccaaaataagtgtctcaactttgtactaactttagtacaaagttgta 49
Query: 72 ctaagct 78
|||||||
Sbjct: 48 ctaagct 42
Score = 58.0 bits (29), Expect = 3e-08
Identities = 29/29 (100%)
Strand = Plus / Plus
Query: 11 ctactccctccgtcccaaaataagtgtct 39
|||||||||||||||||||||||||||||
Sbjct: 4 ctactccctccgtcccaaaataagtgtct 32
Score = 48.1 bits (24), Expect = 3e-05
Identities = 30/32 (93%)
Strand = Plus / Plus
Query: 78 ttgagacacttattttgcgacggagggagtat 109
||||||||||||||||| || |||||||||||
Sbjct: 78 ttgagacacttattttgggatggagggagtat 109
>RF00906;MIR1122;AJ234583.1/157-260 4513:Hordeum vulgare
Length = 104
Score = 105 bits (53), Expect = 1e-22
Identities = 87/97 (89%), Gaps = 1/97 (1%)
Strand = Plus / Plus
Query: 12 tactccctccgtcccaaaataagtgtctcaactttgtactagctctagtacaaagttgta 71
||||||||||||| |||||||||| ||| || ||| |||||||| |||| ||||||| ||
Sbjct: 5 tactccctccgtctcaaaataagtttcttaattttatactagct-tagtgcaaagttata 63
Query: 72 ctaagcttgagacacttattttgcgacggagggagta 108
|||||||||||||| |||||||| |||||||||||||
Sbjct: 64 ctaagcttgagacaattattttgagacggagggagta 100
Score = 46.1 bits (23), Expect = 1e-04
Identities = 29/31 (93%)
Strand = Plus / Minus
Query: 12 tactccctccgtcccaaaataagtgtctcaa 42
||||||||||||| |||||||| ||||||||
Sbjct: 100 tactccctccgtctcaaaataattgtctcaa 70
Score = 44.1 bits (22), Expect = 4e-04
Identities = 25/26 (96%)
Strand = Plus / Minus
Query: 85 acttattttgcgacggagggagtatt 110
|||||||||| |||||||||||||||
Sbjct: 28 acttattttgagacggagggagtatt 3
>RF00906;MIR1122;AF488415.1/78603-78755 4568:Triticum monococcum
Length = 153
Score = 103 bits (52), Expect = 5e-22
Identities = 67/72 (93%)
Strand = Plus / Minus
Query: 12 tactccctccgtcccaaaataagtgtctcaactttgtactagctctagtacaaagttgta 71
|||||||||||||||||||||| |||||||| ||||||||| || |||||||||||||||
Sbjct: 149 tactccctccgtcccaaaataactgtctcaagtttgtactaactttagtacaaagttgta 90
Query: 72 ctaagcttgaga 83
||||| ||||||
Sbjct: 89 ctaaggttgaga 78
Score = 85.7 bits (43), Expect = 1e-16
Identities = 64/71 (90%)
Strand = Plus / Minus
Query: 36 gtctcaactttgtactagctctagtacaaagttgtactaagcttgagacacttattttgc 95
||||||||||||||||| | |||| ||||||||||||||| |||||||||||||||||
Sbjct: 77 gtctcaactttgtactaaatttagtgcaaagttgtactaaggttgagacacttattttgg 18
Query: 96 gacggagggag 106
|||| ||||||
Sbjct: 17 gacgaagggag 7
Score = 52.0 bits (26), Expect = 2e-06
Identities = 29/30 (96%)
Strand = Plus / Plus
Query: 14 ctccctccgtcccaaaataagtgtctcaac 43
|||||| |||||||||||||||||||||||
Sbjct: 7 ctcccttcgtcccaaaataagtgtctcaac 36
Score = 50.1 bits (25), Expect = 7e-06
Identities = 31/33 (93%)
Strand = Plus / Plus
Query: 77 cttgagacacttattttgcgacggagggagtat 109
||||||||| |||||||| ||||||||||||||
Sbjct: 118 cttgagacagttattttgggacggagggagtat 150
>RF00906;MIR1122;AK249748.1/2677-2573 112509:Hordeum vulgare subsp.
vulgare (domesticated barley)
Length = 105
Score = 97.6 bits (49), Expect = 3e-20
Identities = 85/97 (87%)
Strand = Plus / Plus
Query: 12 tactccctccgtcccaaaataagtgtctcaactttgtactagctctagtacaaagttgta 71
||||||||| || ||||||||| ||||| ||||||||||||||| || || ||| || ||
Sbjct: 5 tactccctctgttccaaaataactgtcttaactttgtactagctttactataaatttata 64
Query: 72 ctaagcttgagacacttattttgcgacggagggagta 108
||||| || ||||| ||||||||||||||||||||||
Sbjct: 65 ctaagtttaagacatttattttgcgacggagggagta 101
>RF00906;MIR1122;EU282770.1/593-711 112509:Hordeum vulgare subsp.
vulgare (domesticated barley)
Length = 119
Score = 95.6 bits (48), Expect = 1e-19
Identities = 75/84 (89%)
Strand = Plus / Plus
Query: 11 ctactccctccgtcccaaaataagtgtctcaactttgtactagctctagtacaaagttgt 70
|||||||||||||| ||||||| ||||||||||||| |||||||||||| ||||||||
Sbjct: 4 ctactccctccgtctcaaaataggtgtctcaactttaccctagctctagtataaagttgt 63
Query: 71 actaagcttgagacacttattttg 94
|||||| |||||| | ||||||||
Sbjct: 64 actaagtttgagaaagttattttg 87
Score = 46.1 bits (23), Expect = 1e-04
Identities = 29/31 (93%)
Strand = Plus / Minus
Query: 78 ttgagacacttattttgcgacggagggagta 108
||||||||| ||||||| |||||||||||||
Sbjct: 35 ttgagacacctattttgagacggagggagta 5
Score = 46.1 bits (23), Expect = 1e-04
Identities = 26/27 (96%)
Strand = Plus / Minus
Query: 12 tactccctccgtcccaaaataagtgtc 38
|||||||||||||||||||||| ||||
Sbjct: 115 tactccctccgtcccaaaataactgtc 89
>RF00906;MIR1122;AY663392.1/117099-117203 4565:Triticum aestivum
(bread wheat)
Length = 105
Score = 91.7 bits (46), Expect = 2e-18
Identities = 73/82 (89%)
Strand = Plus / Minus
Query: 12 tactccctccgtcccaaaataagtgtctcaactttgtactagctctagtacaaagttgta 71
|||||||||| ||||||||||||||| | || |||||| ||||| ||||| |||||| ||
Sbjct: 101 tactccctccatcccaaaataagtgtgttaattttgtattagctttagtataaagttata 42
Query: 72 ctaagcttgagacacttatttt 93
||||| ||||||||||||||||
Sbjct: 41 ctaagattgagacacttatttt 20
>RF00906;MIR1122;U29095.1/333-439 4565:Triticum aestivum (bread
wheat)
Length = 107
Score = 75.8 bits (38), Expect = 1e-13
Identities = 88/101 (87%), Gaps = 4/101 (3%)
Strand = Plus / Plus
Query: 12 tactccctccgtcccaaaataagtg--tctcaactttgtactagctctagtacaaagtt- 68
||||||||||||||||||||||||| |||||||||| ||||| | ||||||||| ||
Sbjct: 5 tactccctccgtcccaaaataagtggatctcaactttatactatttttagtacaaaatta 64
Query: 69 gtactaagcttgagacacttattttgcgacggagggagtat 109
|||| ||| ||||| ||||||||| | ||||||||||||||
Sbjct: 65 gtacaaag-ttgagtcacttatttcgggacggagggagtat 104
Score = 65.9 bits (33), Expect = 1e-10
Identities = 39/41 (95%)
Strand = Plus / Minus
Query: 12 tactccctccgtcccaaaataagtgtctcaactttgtacta 52
||||||||||||||| ||||||||| |||||||||||||||
Sbjct: 103 tactccctccgtcccgaaataagtgactcaactttgtacta 63
>RF00906;MIR1122;FJ477093.1/40908-41001 4513:Hordeum vulgare
Length = 94
Score = 75.8 bits (38), Expect = 1e-13
Identities = 53/58 (91%)
Strand = Plus / Minus
Query: 12 tactccctccgtcccaaaataagtgtctcaactttgtactagctctagtacaaagttg 69
|||||||||||||||||| |||||| ||||||||| ||||| || |||||||||||||
Sbjct: 90 tactccctccgtcccaaattaagtgactcaactttatactaactttagtacaaagttg 33
Score = 65.9 bits (33), Expect = 1e-10
Identities = 39/41 (95%)
Strand = Plus / Plus
Query: 12 tactccctccgtcccaaaataagtgtctcaactttgtacta 52
||||||||| ||||||||||||||| |||||||||||||||
Sbjct: 5 tactccctctgtcccaaaataagtgactcaactttgtacta 45
>RF00906;MIR1122;AF521177.1/81577-81474 4513:Hordeum vulgare
Length = 104
Score = 73.8 bits (37), Expect = 5e-13
Identities = 40/41 (97%)
Strand = Plus / Minus
Query: 12 tactccctccgtcccaaaataagtgtctcaactttgtacta 52
||||||||||||||||||||||||| |||||||||||||||
Sbjct: 100 tactccctccgtcccaaaataagtgactcaactttgtacta 60
Score = 48.1 bits (24), Expect = 3e-05
Identities = 30/32 (93%)
Strand = Plus / Plus
Query: 78 ttgagacacttattttgcgacggagggagtat 109
||||| ||||||||||| ||||||||||||||
Sbjct: 70 ttgagtcacttattttgggacggagggagtat 101
>RF00906;MIR1122;FJ374625.1/3001-2870 4573:Aegilops speltoides
Length = 132
Score = 73.8 bits (37), Expect = 5e-13
Identities = 40/41 (97%)
Strand = Plus / Plus
Query: 12 tactccctccgtcccaaaataagtgtctcaactttgtacta 52
||||||||||||||||||||||||| |||||||||||||||
Sbjct: 5 tactccctccgtcccaaaataagtgactcaactttgtacta 45
Score = 58.0 bits (29), Expect = 3e-08
Identities = 38/41 (92%)
Strand = Plus / Minus
Query: 12 tactccctccgtcccaaaataagtgtctcaactttgtacta 52
||||| |||| |||||||||||||| |||||||||||||||
Sbjct: 128 tactcgctccatcccaaaataagtgactcaactttgtacta 88
Score = 52.0 bits (26), Expect = 2e-06
Identities = 49/54 (90%), Gaps = 2/54 (3%)
Strand = Plus / Minus
Query: 57 tagtacaaagtt-gtactaagcttgagacacttattttgcgacggagggagtat 109
|||||||||||| |||| ||| ||||| ||||||||||| ||||||||||||||
Sbjct: 56 tagtacaaagttagtacaaag-ttgagtcacttattttgggacggagggagtat 4
>RF00906;MIR1122;AK250735.1/291-376 112509:Hordeum vulgare subsp.
vulgare (domesticated barley)
Length = 86
Score = 69.9 bits (35), Expect = 7e-12
Identities = 42/43 (97%), Gaps = 1/43 (2%)
Strand = Plus / Plus
Query: 11 ctactccctccgtcccaaaataagtgtct-caactttgtacta 52
||||||||||||||||||||||||||||| |||||||||||||
Sbjct: 4 ctactccctccgtcccaaaataagtgtctccaactttgtacta 46
Score = 50.1 bits (25), Expect = 7e-06
Identities = 28/29 (96%)
Strand = Plus / Minus
Query: 80 gagacacttattttgcgacggagggagta 108
||||||||||||||| |||||||||||||
Sbjct: 33 gagacacttattttgggacggagggagta 5
Score = 48.1 bits (24), Expect = 3e-05
Identities = 33/36 (91%)
Strand = Plus / Minus
Query: 8 atgctactccctccgtcccaaaataagtgtctcaac 43
|||||||||| ||| |||||||||||||| ||||||
Sbjct: 86 atgctactccttccctcccaaaataagtgcctcaac 51
>RF00906;MIR1122;AB183299.1/312-404 4565:Triticum aestivum (bread
wheat)
Length = 93
Score = 67.9 bits (34), Expect = 3e-11
Identities = 46/50 (92%)
Strand = Plus / Minus
Query: 57 tagtacaaagttgtactaagcttgagacacttattttgcgacggagggag 106
|||||||||||| |||||| ||||||||||||||||| |||||||||||
Sbjct: 56 tagtacaaagttatactaaagttgagacacttattttgggacggagggag 7
Score = 65.9 bits (33), Expect = 1e-10
Identities = 33/33 (100%)
Strand = Plus / Plus
Query: 14 ctccctccgtcccaaaataagtgtctcaacttt 46
|||||||||||||||||||||||||||||||||
Sbjct: 7 ctccctccgtcccaaaataagtgtctcaacttt 39
>RF00906;MIR1122;AF488415.1/128685-128592 4568:Triticum monococcum
Length = 94
Score = 60.0 bits (30), Expect = 7e-09
Identities = 51/58 (87%)
Strand = Plus / Minus
Query: 12 tactccctccgtcccaaaataagtgtctcaactttgtactagctctagtacaaagttg 69
|||||||||| | |||||||| || ||||||||||||||| || |||||||||||||
Sbjct: 90 tactccctccattccaaaatagatgactcaactttgtactaactttagtacaaagttg 33
>RF00906;MIR1122;AB239678.1/2131-2247 52163:Triticum monococcum
subsp. aegilopoides
Length = 117
Score = 60.0 bits (30), Expect = 7e-09
Identities = 36/38 (94%)
Strand = Plus / Plus
Query: 12 tactccctccgtcccaaaataagtgtctcaactttgta 49
|||||||||||||||||| |||||| ||||||||||||
Sbjct: 5 tactccctccgtcccaaattaagtgactcaactttgta 42
Score = 48.1 bits (24), Expect = 3e-05
Identities = 30/32 (93%)
Strand = Plus / Minus
Query: 12 tactccctccgtcccaaaataagtgtctcaac 43
|||||||||||||||||| |||||| ||||||
Sbjct: 113 tactccctccgtcccaaattaagtgactcaac 82
>RF00906;MIR1122;FJ374624.1/2920-2820 4572:Triticum urartu
Length = 101
Score = 58.0 bits (29), Expect = 3e-08
Identities = 38/41 (92%)
Strand = Plus / Minus
Query: 12 tactccctccgtcccaaaataagtgtctcaactttgtacta 52
||||| ||| ||||||||||||||| |||||||||||||||
Sbjct: 97 tactcgctctgtcccaaaataagtgactcaactttgtacta 57
Score = 54.0 bits (27), Expect = 4e-07
Identities = 33/35 (94%)
Strand = Plus / Plus
Query: 18 ctccgtcccaaaataagtgtctcaactttgtacta 52
|||||||||||| |||||| |||||||||||||||
Sbjct: 11 ctccgtcccaaagtaagtgactcaactttgtacta 45
>RF00906;MIR1122;EU282251.1/1314-1209 52152:Elymus repens
Length = 106
Score = 56.0 bits (28), Expect = 1e-07
Identities = 28/28 (100%)
Strand = Plus / Plus
Query: 11 ctactccctccgtcccaaaataagtgtc 38
||||||||||||||||||||||||||||
Sbjct: 4 ctactccctccgtcccaaaataagtgtc 31
Score = 54.0 bits (27), Expect = 4e-07
Identities = 27/27 (100%)
Strand = Plus / Minus
Query: 12 tactccctccgtcccaaaataagtgtc 38
|||||||||||||||||||||||||||
Sbjct: 102 tactccctccgtcccaaaataagtgtc 76
Score = 48.1 bits (24), Expect = 3e-05
Identities = 36/40 (90%)
Strand = Plus / Minus
Query: 69 gtactaagcttgagacacttattttgcgacggagggagta 108
||||||| ||| ||||||||||||| |||||||||||||
Sbjct: 44 gtactaaatttgcgacacttattttgggacggagggagta 5
Score = 48.1 bits (24), Expect = 3e-05
Identities = 27/28 (96%)
Strand = Plus / Plus
Query: 82 gacacttattttgcgacggagggagtat 109
||||||||||||| ||||||||||||||
Sbjct: 76 gacacttattttgggacggagggagtat 103
>RF01058;MIR806;AL731615.4/103346-103100 39947:Oryza sativa
Japonica Group
Length = 247
Score = 54.0 bits (27), Expect = 4e-07
Identities = 27/27 (100%)
Strand = Plus / Plus
Query: 11 ctactccctccgtcccaaaataagtgt 37
|||||||||||||||||||||||||||
Sbjct: 1 ctactccctccgtcccaaaataagtgt 27
Score = 44.1 bits (22), Expect = 4e-04
Identities = 25/26 (96%)
Strand = Plus / Minus
Query: 83 acacttattttgcgacggagggagta 108
|||||||||||| |||||||||||||
Sbjct: 27 acacttattttgggacggagggagta 2
>RF00906;MIR1122;FJ491378.1/4581-4466 4550:Secale cereale (rye)
Length = 116
Score = 54.0 bits (27), Expect = 4e-07
Identities = 30/31 (96%)
Strand = Plus / Minus
Query: 12 tactccctccgtcccaaaataagtgtctcaa 42
||||||||||||||||||||||||| |||||
Sbjct: 112 tactccctccgtcccaaaataagtgactcaa 82
Score = 48.1 bits (24), Expect = 3e-05
Identities = 30/32 (93%)
Strand = Plus / Plus
Query: 78 ttgagacacttattttgcgacggagggagtat 109
||||| ||||||||||| ||||||||||||||
Sbjct: 82 ttgagtcacttattttgggacggagggagtat 113
Score = 46.1 bits (23), Expect = 1e-04
Identities = 29/31 (93%)
Strand = Plus / Plus
Query: 12 tactccctccgtcccaaaataagtgtctcaa 42
||||||||| ||||||||||||||| |||||
Sbjct: 5 tactccctctgtcccaaaataagtgactcaa 35
>RF00906;MIR1122;AJ507395.1/7785-7899 112509:Hordeum vulgare subsp.
vulgare (domesticated barley)
Length = 115
Score = 54.0 bits (27), Expect = 4e-07
Identities = 30/31 (96%)
Strand = Plus / Minus
Query: 12 tactccctccgtcccaaaataagtgtctcaa 42
||||||||||||||||||||||||| |||||
Sbjct: 111 tactccctccgtcccaaaataagtgactcaa 81
Score = 46.1 bits (23), Expect = 1e-04
Identities = 29/31 (93%)
Strand = Plus / Plus
Query: 78 ttgagacacttattttgcgacggagggagta 108
||||| ||||||||||| |||||||||||||
Sbjct: 81 ttgagtcacttattttgggacggagggagta 111
>RF00906;MIR1122;AF091802.1/1995-2099 37682:Aegilops tauschii
Length = 105
Score = 54.0 bits (27), Expect = 4e-07
Identities = 48/55 (87%)
Strand = Plus / Minus
Query: 11 ctactccctccgtcccaaaataagtgtctcaactttgtactagctctagtacaaa 65
||||||||||||| | |||||| || ||||||||||||||| || |||||||||
Sbjct: 102 ctactccctccgttctaaaatagatgactcaactttgtactaactatagtacaaa 48
Score = 50.1 bits (25), Expect = 7e-06
Identities = 37/41 (90%)
Strand = Plus / Plus
Query: 12 tactccctccgtcccaaaataagtgtctcaactttgtacta 52
|||||||||||| |||||||| || |||||||||||||||
Sbjct: 5 tactccctccgttccaaaatagatgactcaactttgtacta 45
>RF01058;MIR806;AACV01000175.1/175-418 39947:Oryza sativa Japonica
Group
Length = 244
Score = 52.0 bits (26), Expect = 2e-06
Identities = 26/26 (100%)
Strand = Plus / Plus
Query: 11 ctactccctccgtcccaaaataagtg 36
||||||||||||||||||||||||||
Sbjct: 1 ctactccctccgtcccaaaataagtg 26
>RF01058;MIR806;AAAA02015465.1/824-1069 39946:Oryza sativa Indica
Group
Length = 246
Score = 52.0 bits (26), Expect = 2e-06
Identities = 26/26 (100%)
Strand = Plus / Minus
Query: 11 ctactccctccgtcccaaaataagtg 36
||||||||||||||||||||||||||
Sbjct: 246 ctactccctccgtcccaaaataagtg 221
>RF01058;MIR806;AP004279.1/119207-118967 39947:Oryza sativa Japonica
Group
Length = 241
Score = 52.0 bits (26), Expect = 2e-06
Identities = 26/26 (100%)
Strand = Plus / Minus
Query: 11 ctactccctccgtcccaaaataagtg 36
||||||||||||||||||||||||||
Sbjct: 241 ctactccctccgtcccaaaataagtg 216
>RF01058;MIR806;AAAA02012959.1/2038-1794 39946:Oryza sativa Indica
Group
Length = 245
Score = 52.0 bits (26), Expect = 2e-06
Identities = 26/26 (100%)
Strand = Plus / Plus
Query: 11 ctactccctccgtcccaaaataagtg 36
||||||||||||||||||||||||||
Sbjct: 1 ctactccctccgtcccaaaataagtg 26
>RF01058;MIR806;AAAA02007955.1/54103-53859 39946:Oryza sativa
Indica Group
Length = 245
Score = 52.0 bits (26), Expect = 2e-06
Identities = 26/26 (100%)
Strand = Plus / Plus
Query: 11 ctactccctccgtcccaaaataagtg 36
||||||||||||||||||||||||||
Sbjct: 1 ctactccctccgtcccaaaataagtg 26
>RF00906;MIR1122;DQ871219.1/88217-88124 85692:Triticum turgidum
subsp. dicoccoides
Length = 94
Score = 52.0 bits (26), Expect = 2e-06
Identities = 50/58 (86%)
Strand = Plus / Minus
Query: 12 tactccctccgtcccaaaataagtgtctcaactttgtactagctctagtacaaagttg 69
|||||||||||| | |||||| | ||||||||||||||| || |||||||||||||
Sbjct: 90 tactccctccgttctaaaatagacgactcaactttgtactatctttagtacaaagttg 33
>RF00906;MIR1122;AB182945.1/6773-6906 4565:Triticum aestivum (bread
wheat)
Length = 134
Score = 52.0 bits (26), Expect = 2e-06
Identities = 29/30 (96%)
Strand = Plus / Minus
Query: 12 tactccctccgtcccaaaataagtgtctca 41
|||||||||||| |||||||||||||||||
Sbjct: 130 tactccctccgttccaaaataagtgtctca 101
Score = 48.1 bits (24), Expect = 3e-05
Identities = 30/32 (93%)
Strand = Plus / Plus
Query: 79 tgagacacttattttgcgacggagggagtatt 110
|||||||||||||||| ||||||||||||||
Sbjct: 101 tgagacacttattttggaacggagggagtatt 132
>RF00906;MIR1122;AF325197.1/3732-3639 4565:Triticum aestivum
(bread wheat)
Length = 94
Score = 52.0 bits (26), Expect = 2e-06
Identities = 50/58 (86%)
Strand = Plus / Minus
Query: 12 tactccctccgtcccaaaataagtgtctcaactttgtactagctctagtacaaagttg 69
|||| ||||||| ||||||| || ||||||||||||||| || |||||||||||||
Sbjct: 90 tacttcctccgtttcaaaatagatgactcaactttgtactaactttagtacaaagttg 33
>RF00906;MIR1122;DQ537335.1/8332-8425 4565:Triticum aestivum
(bread wheat)
Length = 94
Score = 52.0 bits (26), Expect = 2e-06
Identities = 50/58 (86%)
Strand = Plus / Plus
Query: 12 tactccctccgtcccaaaataagtgtctcaactttgtactagctctagtacaaagttg 69
|||||||||||| |||||||| || ||||||||||||||| || |||| |||||||
Sbjct: 5 tactccctccgttccaaaatagatgactcaactttgtactaactttagtgtaaagttg 62
>RF01058;MIR806;AP008208.1/6823788-6823544 39947:Oryza sativa
Japonica Group
Length = 245
Score = 50.1 bits (25), Expect = 7e-06
Identities = 25/25 (100%)
Strand = Plus / Minus
Query: 12 tactccctccgtcccaaaataagtg 36
|||||||||||||||||||||||||
Sbjct: 244 tactccctccgtcccaaaataagtg 220
Score = 44.1 bits (22), Expect = 4e-04
Identities = 25/26 (96%)
Strand = Plus / Plus
Query: 84 cacttattttgcgacggagggagtat 109
||||||||||| ||||||||||||||
Sbjct: 220 cacttattttgggacggagggagtat 245
>RF01058;MIR806;AACV01004692.1/2655-2900 39947:Oryza sativa
Japonica Group
Length = 246
Score = 50.1 bits (25), Expect = 7e-06
Identities = 25/25 (100%)
Strand = Plus / Plus
Query: 12 tactccctccgtcccaaaataagtg 36
|||||||||||||||||||||||||
Sbjct: 2 tactccctccgtcccaaaataagtg 26
>RF01058;MIR806;AAAA02014927.1/5775-5532 39946:Oryza sativa Indica
Group
Length = 244
Score = 50.1 bits (25), Expect = 7e-06
Identities = 25/25 (100%)
Strand = Plus / Plus
Query: 12 tactccctccgtcccaaaataagtg 36
|||||||||||||||||||||||||
Sbjct: 2 tactccctccgtcccaaaataagtg 26
Score = 44.1 bits (22), Expect = 4e-04
Identities = 25/26 (96%)
Strand = Plus / Minus
Query: 11 ctactccctccgtcccaaaataagtg 36
||||| ||||||||||||||||||||
Sbjct: 244 ctactacctccgtcccaaaataagtg 219
>RF01058;MIR806;AACV01025022.1/35011-35254 39947:Oryza sativa
Japonica Group
Length = 244
Score = 50.1 bits (25), Expect = 7e-06
Identities = 25/25 (100%)
Strand = Plus / Plus
Query: 12 tactccctccgtcccaaaataagtg 36
|||||||||||||||||||||||||
Sbjct: 2 tactccctccgtcccaaaataagtg 26
Score = 44.1 bits (22), Expect = 4e-04
Identities = 25/26 (96%)
Strand = Plus / Minus
Query: 84 cacttattttgcgacggagggagtat 109
||||||||||| ||||||||||||||
Sbjct: 26 cacttattttgggacggagggagtat 1
>RF01058;MIR806;AP008214.1/5532426-5532666 39947:Oryza sativa
Japonica Group
Length = 241
Score = 50.1 bits (25), Expect = 7e-06
Identities = 25/25 (100%)
Strand = Plus / Minus
Query: 12 tactccctccgtcccaaaataagtg 36
|||||||||||||||||||||||||
Sbjct: 240 tactccctccgtcccaaaataagtg 216
>RF01058;MIR806;AAAA02004537.1/25464-25706 39946:Oryza sativa
Indica Group
Length = 243
Score = 50.1 bits (25), Expect = 7e-06
Identities = 25/25 (100%)
Strand = Plus / Plus
Query: 12 tactccctccgtcccaaaataagtg 36
|||||||||||||||||||||||||
Sbjct: 2 tactccctccgtcccaaaataagtg 26
Score = 44.1 bits (22), Expect = 4e-04
Identities = 25/26 (96%)
Strand = Plus / Minus
Query: 84 cacttattttgcgacggagggagtat 109
||||||||||| ||||||||||||||
Sbjct: 26 cacttattttgggacggagggagtat 1
>RF01058;MIR806;AP004672.3/126730-126486 39947:Oryza sativa
Japonica Group
Length = 245
Score = 50.1 bits (25), Expect = 7e-06
Identities = 25/25 (100%)
Strand = Plus / Plus
Query: 12 tactccctccgtcccaaaataagtg 36
|||||||||||||||||||||||||
Sbjct: 2 tactccctccgtcccaaaataagtg 26
>RF01058;MIR806;AACV01005022.1/1990-2230 39947:Oryza sativa Japonica
Group
Length = 241
Score = 50.1 bits (25), Expect = 7e-06
Identities = 25/25 (100%)
Strand = Plus / Minus
Query: 12 tactccctccgtcccaaaataagtg 36
|||||||||||||||||||||||||
Sbjct: 240 tactccctccgtcccaaaataagtg 216
>RF01058;MIR806;AAAA02009876.1/3121-2881 39946:Oryza sativa Indica
Group
Length = 241
Score = 50.1 bits (25), Expect = 7e-06
Identities = 25/25 (100%)
Strand = Plus / Minus
Query: 12 tactccctccgtcccaaaataagtg 36
|||||||||||||||||||||||||
Sbjct: 240 tactccctccgtcccaaaataagtg 216
Score = 44.1 bits (22), Expect = 4e-04
Identities = 25/26 (96%)
Strand = Plus / Plus
Query: 84 cacttattttgcgacggagggagtat 109
||||||||||| ||||||||||||||
Sbjct: 216 cacttattttgggacggagggagtat 241
>RF00906;MIR1122;DQ267106.1/62901-62968 4572:Triticum urartu
Length = 68
Score = 50.1 bits (25), Expect = 7e-06
Identities = 25/25 (100%)
Strand = Plus / Plus
Query: 12 tactccctccgtcccaaaataagtg 36
|||||||||||||||||||||||||
Sbjct: 5 tactccctccgtcccaaaataagtg 29
Score = 44.1 bits (22), Expect = 4e-04
Identities = 25/26 (96%)
Strand = Plus / Minus
Query: 84 cacttattttgcgacggagggagtat 109
||||||||||| ||||||||||||||
Sbjct: 29 cacttattttgggacggagggagtat 4
>RF00906;MIR1122;AF181455.1/3108-2994 4513:Hordeum vulgare
Length = 115
Score = 50.1 bits (25), Expect = 7e-06
Identities = 25/25 (100%)
Strand = Plus / Minus
Query: 12 tactccctccgtcccaaaataagtg 36
|||||||||||||||||||||||||
Sbjct: 111 tactccctccgtcccaaaataagtg 87
>RF00906;MIR1122;AF525764.1/1593-1489 200361:Aegilops tauschii
subsp. strangulata
Length = 105
Score = 50.1 bits (25), Expect = 7e-06
Identities = 28/29 (96%)
Strand = Plus / Minus
Query: 11 ctactccctccgtcccaaaataagtgtct 39
||||||||||| |||||||||||||||||
Sbjct: 102 ctactccctccatcccaaaataagtgtct 74
Score = 46.1 bits (23), Expect = 1e-04
Identities = 44/51 (86%)
Strand = Plus / Plus
Query: 58 agtacaaagttgtactaagcttgagacacttattttgcgacggagggagta 108
|||||||||||||||||| |||||||||||||| || ||||||||||
Sbjct: 51 agtacaaagttgtactaaagcaaagacacttattttgggatggagggagta 101
>RF00906;MIR1122;AP008214.1/14410723-14410632 39947:Oryza sativa
Japonica Group
Length = 92
Score = 50.1 bits (25), Expect = 7e-06
Identities = 25/25 (100%)
Strand = Plus / Plus
Query: 12 tactccctccgtcccaaaataagtg 36
|||||||||||||||||||||||||
Sbjct: 5 tactccctccgtcccaaaataagtg 29
Score = 44.1 bits (22), Expect = 4e-04
Identities = 25/26 (96%)
Strand = Plus / Minus
Query: 84 cacttattttgcgacggagggagtat 109
||||||||||| ||||||||||||||
Sbjct: 29 cacttattttgggacggagggagtat 4
>RF00906;MIR1122;AP008216.1/15579713-15579809 39947:Oryza sativa
Japonica Group
Length = 97
Score = 50.1 bits (25), Expect = 7e-06
Identities = 25/25 (100%)
Strand = Plus / Plus
Query: 11 ctactccctccgtcccaaaataagt 35
|||||||||||||||||||||||||
Sbjct: 4 ctactccctccgtcccaaaataagt 28
>RF00906;MIR1122;AP004994.2/69469-69314 39947:Oryza sativa Japonica
Group
Length = 156
Score = 50.1 bits (25), Expect = 7e-06
Identities = 25/25 (100%)
Strand = Plus / Minus
Query: 8 atgctactccctccgtcccaaaata 32
|||||||||||||||||||||||||
Sbjct: 156 atgctactccctccgtcccaaaata 132
>RF00906;MIR1122;AC145396.3/122873-122984 39947:Oryza sativa
Japonica Group
Length = 112
Score = 50.1 bits (25), Expect = 7e-06
Identities = 25/25 (100%)
Strand = Plus / Minus
Query: 8 atgctactccctccgtcccaaaata 32
|||||||||||||||||||||||||
Sbjct: 112 atgctactccctccgtcccaaaata 88
>RF00906;MIR1122;AAAA02018670.1/1486-1331 39946:Oryza sativa Indica
Group
Length = 156
Score = 50.1 bits (25), Expect = 7e-06
Identities = 25/25 (100%)
Strand = Plus / Minus
Query: 8 atgctactccctccgtcccaaaata 32
|||||||||||||||||||||||||
Sbjct: 156 atgctactccctccgtcccaaaata 132
>RF01058;MIR806;AACV01020112.1/46634-46870 39947:Oryza sativa
Japonica Group
Length = 237
Score = 48.1 bits (24), Expect = 3e-05
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 11 ctactccctccgtcccaaaataag 34
||||||||||||||||||||||||
Sbjct: 1 ctactccctccgtcccaaaataag 24
Score = 44.1 bits (22), Expect = 4e-04
Identities = 22/22 (100%)
Strand = Plus / Minus
Query: 12 tactccctccgtcccaaaataa 33
||||||||||||||||||||||
Sbjct: 236 tactccctccgtcccaaaataa 215
>RF00906;MIR1122;EF560592.1/17009-17118 4567:Triticum turgidum
subsp. durum (durum wheat)
Length = 110
Score = 48.1 bits (24), Expect = 3e-05
Identities = 27/28 (96%)
Strand = Plus / Minus
Query: 11 ctactccctccgtcccaaaataagtgtc 38
||||| ||||||||||||||||||||||
Sbjct: 107 ctactacctccgtcccaaaataagtgtc 80
>RF00906;MIR1122;FJ491378.1/3751-3855 4550:Secale cereale (rye)
Length = 105
Score = 48.1 bits (24), Expect = 3e-05
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 15 tccctccgtcccaaaataagtgtc 38
||||||||||||||||||||||||
Sbjct: 8 tccctccgtcccaaaataagtgtc 31
Score = 48.1 bits (24), Expect = 3e-05
Identities = 27/28 (96%)
Strand = Plus / Minus
Query: 11 ctactccctccgtcccaaaataagtgtc 38
|||||||| |||||||||||||||||||
Sbjct: 102 ctactcccgccgtcccaaaataagtgtc 75
>RF00906;MIR1122;AP008209.1/35984076-35984203 39947:Oryza sativa
Japonica Group
Length = 128
Score = 48.1 bits (24), Expect = 3e-05
Identities = 24/24 (100%)
Strand = Plus / Minus
Query: 9 tgctactccctccgtcccaaaata 32
||||||||||||||||||||||||
Sbjct: 127 tgctactccctccgtcccaaaata 104
>RF01058;MIR806;AP008208.1/24144061-24144300 39947:Oryza sativa
Japonica Group
Length = 240
Score = 46.1 bits (23), Expect = 1e-04
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 12 tactccctccgtcccaaaataag 34
|||||||||||||||||||||||
Sbjct: 2 tactccctccgtcccaaaataag 24
Score = 44.1 bits (22), Expect = 4e-04
Identities = 25/26 (96%)
Strand = Plus / Minus
Query: 11 ctactccctccgtcccaaaataagtg 36
||||| ||||||||||||||||||||
Sbjct: 240 ctactacctccgtcccaaaataagtg 215
>RF01058;MIR806;AACV01004890.1/11000-11239 39947:Oryza sativa
Japonica Group
Length = 240
Score = 46.1 bits (23), Expect = 1e-04
Identities = 23/23 (100%)
Strand = Plus / Minus
Query: 12 tactccctccgtcccaaaataag 34
|||||||||||||||||||||||
Sbjct: 239 tactccctccgtcccaaaataag 217
Score = 44.1 bits (22), Expect = 4e-04
Identities = 25/26 (96%)
Strand = Plus / Plus
Query: 11 ctactccctccgtcccaaaataagtg 36
||||| ||||||||||||||||||||
Sbjct: 1 ctactacctccgtcccaaaataagtg 26
>RF00906;MIR1122;D30809.1/4836-4921 4565:Triticum aestivum (bread
wheat)
Length = 86
Score = 46.1 bits (23), Expect = 1e-04
Identities = 26/27 (96%)
Strand = Plus / Minus
Query: 12 tactccctccgtcccaaaataagtgtc 38
||||||| |||||||||||||||||||
Sbjct: 82 tactcccaccgtcccaaaataagtgtc 56
>RF00906;MIR1122;CR626933.1/11895-11804 4571:Triticum turgidum
Length = 92
Score = 46.1 bits (23), Expect = 1e-04
Identities = 23/23 (100%)
Strand = Plus / Minus
Query: 17 cctccgtcccaaaataagtgtct 39
|||||||||||||||||||||||
Sbjct: 85 cctccgtcccaaaataagtgtct 63
>RF00906;MIR1122;DQ900687.1/24296-24401 112509:Hordeum vulgare
subsp. vulgare (domesticated barley)
Length = 106
Score = 46.1 bits (23), Expect = 1e-04
Identities = 26/27 (96%)
Strand = Plus / Minus
Query: 12 tactccctccgtcccaaaataagtgtc 38
|||||||||||||| ||||||||||||
Sbjct: 102 tactccctccgtcctaaaataagtgtc 76
>RF00906;MIR1122;AK252095.1/1820-1925 112509:Hordeum vulgare subsp.
vulgare (domesticated barley)
Length = 106
Score = 46.1 bits (23), Expect = 1e-04
Identities = 26/27 (96%)
Strand = Plus / Minus
Query: 12 tactccctccgtcccaaaataagtgtc 38
||||||||| |||||||||||||||||
Sbjct: 102 tactccctctgtcccaaaataagtgtc 76
>RF00906;MIR1122;EU282656.1/645-750 112509:Hordeum vulgare subsp.
vulgare (domesticated barley)
Length = 106
Score = 46.1 bits (23), Expect = 1e-04
Identities = 26/27 (96%)
Strand = Plus / Minus
Query: 12 tactccctccgtcccaaaataagtgtc 38
||||||||| |||||||||||||||||
Sbjct: 102 tactccctcggtcccaaaataagtgtc 76
>RF00906;MIR1122;AAAA02032192.1/8285-8403 39946:Oryza sativa Indica
Group
Length = 119
Score = 46.1 bits (23), Expect = 1e-04
Identities = 23/23 (100%)
Strand = Plus / Minus
Query: 10 gctactccctccgtcccaaaata 32
|||||||||||||||||||||||
Sbjct: 117 gctactccctccgtcccaaaata 95
>RF00906;MIR1122;AAAA02000966.1/612-453 39946:Oryza sativa Indica
Group
Length = 160
Score = 46.1 bits (23), Expect = 1e-04
Identities = 23/23 (100%)
Strand = Plus / Minus
Query: 11 ctactccctccgtcccaaaataa 33
|||||||||||||||||||||||
Sbjct: 157 ctactccctccgtcccaaaataa 135
Score = 44.1 bits (22), Expect = 4e-04
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 12 tactccctccgtcccaaaataa 33
||||||||||||||||||||||
Sbjct: 5 tactccctccgtcccaaaataa 26
>RF00906;MIR1122;AACV01002075.1/518-362 39947:Oryza sativa Japonica
Group
Length = 157
Score = 46.1 bits (23), Expect = 1e-04
Identities = 23/23 (100%)
Strand = Plus / Minus
Query: 10 gctactccctccgtcccaaaata 32
|||||||||||||||||||||||
Sbjct: 155 gctactccctccgtcccaaaata 133
>RF00906;MIR1122;AAAA02032340.1/20991-20868 39946:Oryza sativa
Indica Group
Length = 124
Score = 46.1 bits (23), Expect = 1e-04
Identities = 23/23 (100%)
Strand = Plus / Minus
Query: 10 gctactccctccgtcccaaaata 32
|||||||||||||||||||||||
Sbjct: 122 gctactccctccgtcccaaaata 100
>RF00906;MIR1122;AAAA02003606.1/3920-3764 39946:Oryza sativa Indica
Group
Length = 157
Score = 46.1 bits (23), Expect = 1e-04
Identities = 23/23 (100%)
Strand = Plus / Minus
Query: 10 gctactccctccgtcccaaaata 32
|||||||||||||||||||||||
Sbjct: 155 gctactccctccgtcccaaaata 133
>RF00906;MIR1122;AP008218.1/2340117-2339983 39947:Oryza sativa
Japonica Group
Length = 135
Score = 46.1 bits (23), Expect = 1e-04
Identities = 23/23 (100%)
Strand = Plus / Minus
Query: 10 gctactccctccgtcccaaaata 32
|||||||||||||||||||||||
Sbjct: 133 gctactccctccgtcccaaaata 111
>RF00906;MIR1122;AP003410.4/123214-123103 39947:Oryza sativa
Japonica Group
Length = 112
Score = 46.1 bits (23), Expect = 1e-04
Identities = 23/23 (100%)
Strand = Plus / Minus
Query: 10 gctactccctccgtcccaaaata 32
|||||||||||||||||||||||
Sbjct: 110 gctactccctccgtcccaaaata 88
>RF00906;MIR1122;AL845342.2/23218-23105 4530:Oryza sativa (rice)
Length = 114
Score = 46.1 bits (23), Expect = 1e-04
Identities = 23/23 (100%)
Strand = Plus / Minus
Query: 10 gctactccctccgtcccaaaata 32
|||||||||||||||||||||||
Sbjct: 112 gctactccctccgtcccaaaata 90
>RF00906;MIR1122;AP003303.4/77673-77577 39947:Oryza sativa
Japonica Group
Length = 97
Score = 46.1 bits (23), Expect = 1e-04
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 12 tactccctccgtcccaaaataag 34
|||||||||||||||||||||||
Sbjct: 5 tactccctccgtcccaaaataag 27
Score = 46.1 bits (23), Expect = 1e-04
Identities = 23/23 (100%)
Strand = Plus / Minus
Query: 12 tactccctccgtcccaaaataag 34
|||||||||||||||||||||||
Sbjct: 93 tactccctccgtcccaaaataag 71
>RF00906;MIR1122;AP008217.1/18229594-18229693 39947:Oryza sativa
Japonica Group
Length = 100
Score = 46.1 bits (23), Expect = 1e-04
Identities = 23/23 (100%)
Strand = Plus / Minus
Query: 10 gctactccctccgtcccaaaata 32
|||||||||||||||||||||||
Sbjct: 98 gctactccctccgtcccaaaata 76
>RF01058;MIR806;AAAA02020164.1/6230-6473 39946:Oryza sativa Indica
Group
Length = 244
Score = 44.1 bits (22), Expect = 4e-04
Identities = 22/22 (100%)
Strand = Plus / Minus
Query: 11 ctactccctccgtcccaaaata 32
||||||||||||||||||||||
Sbjct: 244 ctactccctccgtcccaaaata 223
>RF01058;MIR806;AP003491.3/18972-19202 39947:Oryza sativa Japonica
Group
Length = 231
Score = 44.1 bits (22), Expect = 4e-04
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 11 ctactccctccgtcccaaaata 32
||||||||||||||||||||||
Sbjct: 1 ctactccctccgtcccaaaata 22
>RF01058;MIR806;AP003911.3/91791-91550 39947:Oryza sativa Japonica
Group
Length = 242
Score = 44.1 bits (22), Expect = 4e-04
Identities = 22/22 (100%)
Strand = Plus / Minus
Query: 11 ctactccctccgtcccaaaata 32
||||||||||||||||||||||
Sbjct: 242 ctactccctccgtcccaaaata 221
>RF00906;MIR1122;ABXC01006480.1/93142-93031 4558:Sorghum bicolor
(sorghum)
Length = 112
Score = 44.1 bits (22), Expect = 4e-04
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 12 tactccctccgtcccaaaataa 33
||||||||||||||||||||||
Sbjct: 5 tactccctccgtcccaaaataa 26
>RF00906;MIR1122;AF325196.1/34233-34141 4565:Triticum aestivum
(bread wheat)
Length = 93
Score = 44.1 bits (22), Expect = 4e-04
Identities = 22/22 (100%)
Strand = Plus / Minus
Query: 11 ctactccctccgtcccaaaata 32
||||||||||||||||||||||
Sbjct: 90 ctactccctccgtcccaaaata 69
>RF00906;MIR1122;DQ106595.1/374-276 112509:Hordeum vulgare subsp.
vulgare (domesticated barley)
Length = 99
Score = 44.1 bits (22), Expect = 4e-04
Identities = 39/44 (88%), Gaps = 3/44 (6%)
Strand = Plus / Minus
Query: 12 tactccctccgtcccaaaataa---gtgtctcaactttgtacta 52
|||||||| ||||||||||||| ||| |||||||||||||||
Sbjct: 95 tactccctgcgtcccaaaataataagtggctcaactttgtacta 52
>RF00906;MIR1122;EF059989.1/24895-24770 29664:Brachypodium
sylvaticum
Length = 126
Score = 44.1 bits (22), Expect = 4e-04
Identities = 34/38 (89%)
Strand = Plus / Minus
Query: 11 ctactccctccgtcccaaaataagtgtctcaactttgt 48
||||||||||||||||| | |||||| ||||| |||||
Sbjct: 123 ctactccctccgtcccatattaagtgactcaaatttgt 86
>RF00906;MIR1122;AAAA02021752.1/2915-2764 39946:Oryza sativa Indica
Group
Length = 152
Score = 44.1 bits (22), Expect = 4e-04
Identities = 22/22 (100%)
Strand = Plus / Minus
Query: 11 ctactccctccgtcccaaaata 32
||||||||||||||||||||||
Sbjct: 149 ctactccctccgtcccaaaata 128
>RF00906;MIR1122;AAAA02022195.1/27114-27226 39946:Oryza sativa
Indica Group
Length = 113
Score = 44.1 bits (22), Expect = 4e-04
Identities = 22/22 (100%)
Strand = Plus / Minus
Query: 12 tactccctccgtcccaaaataa 33
||||||||||||||||||||||
Sbjct: 109 tactccctccgtcccaaaataa 88
>RF00906;MIR1122;AAAA02027402.1/5650-5805 39946:Oryza sativa
Indica Group
Length = 156
Score = 44.1 bits (22), Expect = 4e-04
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 11 ctactccctccgtcccaaaata 32
||||||||||||||||||||||
Sbjct: 4 ctactccctccgtcccaaaata 25
>RF00906;MIR1122;AAAA02028442.1/1248-1113 39946:Oryza sativa
Indica Group
Length = 136
Score = 44.1 bits (22), Expect = 4e-04
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 12 tactccctccgtcccaaaataa 33
||||||||||||||||||||||
Sbjct: 5 tactccctccgtcccaaaataa 26
Score = 44.1 bits (22), Expect = 4e-04
Identities = 22/22 (100%)
Strand = Plus / Minus
Query: 12 tactccctccgtcccaaaataa 33
||||||||||||||||||||||
Sbjct: 132 tactccctccgtcccaaaataa 111
>RF00906;MIR1122;FJ581044.1/175385-175266 4538:Oryza glaberrima
(African rice)
Length = 120
Score = 44.1 bits (22), Expect = 4e-04
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 12 tactccctccgtcccaaaataa 33
||||||||||||||||||||||
Sbjct: 5 tactccctccgtcccaaaataa 26
>RF00906;MIR1122;AAAA02016488.1/7317-7428 39946:Oryza sativa Indica
Group
Length = 112
Score = 44.1 bits (22), Expect = 4e-04
Identities = 22/22 (100%)
Strand = Plus / Minus
Query: 11 ctactccctccgtcccaaaata 32
||||||||||||||||||||||
Sbjct: 109 ctactccctccgtcccaaaata 88
>RF00906;MIR1122;AL606686.3/85873-85713 39947:Oryza sativa Japonica
Group
Length = 161
Score = 44.1 bits (22), Expect = 4e-04
Identities = 22/22 (100%)
Strand = Plus / Minus
Query: 11 ctactccctccgtcccaaaata 32
||||||||||||||||||||||
Sbjct: 158 ctactccctccgtcccaaaata 137
>RF00906;MIR1122;AAAA02035134.1/58354-58198 39946:Oryza sativa
Indica Group
Length = 157
Score = 44.1 bits (22), Expect = 4e-04
Identities = 22/22 (100%)
Strand = Plus / Minus
Query: 11 ctactccctccgtcccaaaata 32
||||||||||||||||||||||
Sbjct: 154 ctactccctccgtcccaaaata 133
>RF00906;MIR1122;AAAA02034474.1/8259-8349 39946:Oryza sativa
Indica Group
Length = 91
Score = 44.1 bits (22), Expect = 4e-04
Identities = 22/22 (100%)
Strand = Plus / Minus
Query: 11 ctactccctccgtcccaaaata 32
||||||||||||||||||||||
Sbjct: 88 ctactccctccgtcccaaaata 67
>RF00906;MIR1122;AAAA02018379.1/19319-19440 39946:Oryza sativa
Indica Group
Length = 122
Score = 44.1 bits (22), Expect = 4e-04
Identities = 22/22 (100%)
Strand = Plus / Minus
Query: 12 tactccctccgtcccaaaataa 33
||||||||||||||||||||||
Sbjct: 118 tactccctccgtcccaaaataa 97
>RF00906;MIR1122;AAAA02003301.1/35949-35819 39946:Oryza sativa
Indica Group
Length = 131
Score = 44.1 bits (22), Expect = 4e-04
Identities = 22/22 (100%)
Strand = Plus / Minus
Query: 11 ctactccctccgtcccaaaata 32
||||||||||||||||||||||
Sbjct: 128 ctactccctccgtcccaaaata 107
>RF00906;MIR1122;AAAA02033927.1/2539-2391 39946:Oryza sativa
Indica Group
Length = 149
Score = 44.1 bits (22), Expect = 4e-04
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 11 ctactccctccgtcccaaaata 32
||||||||||||||||||||||
Sbjct: 4 ctactccctccgtcccaaaata 25
>RF00906;MIR1122;AAAA02013497.1/8427-8281 39946:Oryza sativa
Indica Group
Length = 147
Score = 44.1 bits (22), Expect = 4e-04
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 11 ctactccctccgtcccaaaata 32
||||||||||||||||||||||
Sbjct: 4 ctactccctccgtcccaaaata 25
>RF00906;MIR1122;AP002744.2/5581-5711 39947:Oryza sativa Japonica
Group
Length = 131
Score = 44.1 bits (22), Expect = 4e-04
Identities = 22/22 (100%)
Strand = Plus / Minus
Query: 11 ctactccctccgtcccaaaata 32
||||||||||||||||||||||
Sbjct: 128 ctactccctccgtcccaaaata 107
>RF00906;MIR1122;AAAA02004166.1/9974-9858 39946:Oryza sativa
Indica Group
Length = 117
Score = 44.1 bits (22), Expect = 4e-04
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 11 ctactccctccgtcccaaaata 32
||||||||||||||||||||||
Sbjct: 4 ctactccctccgtcccaaaata 25
>RF00906;MIR1122;AP008209.1/8919908-8919797 39947:Oryza sativa
Japonica Group
Length = 112
Score = 44.1 bits (22), Expect = 4e-04
Identities = 22/22 (100%)
Strand = Plus / Minus
Query: 11 ctactccctccgtcccaaaata 32
||||||||||||||||||||||
Sbjct: 109 ctactccctccgtcccaaaata 88
>RF00906;MIR1122;AP008213.1/28683389-28683301 39947:Oryza sativa
Japonica Group
Length = 89
Score = 44.1 bits (22), Expect = 4e-04
Identities = 25/26 (96%)
Strand = Plus / Minus
Query: 11 ctactccctccgtcccaaaataagtg 36
||||||||||||| ||||||||||||
Sbjct: 86 ctactccctccgttccaaaataagtg 61
>RF00906;MIR1122;AACV01010712.1/16660-16524 39947:Oryza sativa
Japonica Group
Length = 137
Score = 44.1 bits (22), Expect = 4e-04
Identities = 25/26 (96%)
Strand = Plus / Plus
Query: 11 ctactccctccgtcccaaaataagtg 36
|||||||||||||||||| |||||||
Sbjct: 4 ctactccctccgtcccaatataagtg 29
>RF00906;MIR1122;AP006453.3/76317-76162 39947:Oryza sativa
Japonica Group
Length = 156
Score = 44.1 bits (22), Expect = 4e-04
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 11 ctactccctccgtcccaaaata 32
||||||||||||||||||||||
Sbjct: 4 ctactccctccgtcccaaaata 25
>RF00906;MIR1122;AC130724.2/11285-11174 39947:Oryza sativa
Japonica Group
Length = 112
Score = 44.1 bits (22), Expect = 4e-04
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 11 ctactccctccgtcccaaaata 32
||||||||||||||||||||||
Sbjct: 4 ctactccctccgtcccaaaata 25
>RF00906;MIR1122;AP008208.1/9514407-9514515 39947:Oryza sativa
Japonica Group
Length = 109
Score = 44.1 bits (22), Expect = 4e-04
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 11 ctactccctccgtcccaaaata 32
||||||||||||||||||||||
Sbjct: 4 ctactccctccgtcccaaaata 25
>RF00906;MIR1122;AP008216.1/11618978-11618822 39947:Oryza sativa
Japonica Group
Length = 157
Score = 44.1 bits (22), Expect = 4e-04
Identities = 22/22 (100%)
Strand = Plus / Minus
Query: 11 ctactccctccgtcccaaaata 32
||||||||||||||||||||||
Sbjct: 154 ctactccctccgtcccaaaata 133
>RF00906;MIR1122;AP008207.1/42089526-42089634 39947:Oryza sativa
Japonica Group
Length = 109
Score = 44.1 bits (22), Expect = 4e-04
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 11 ctactccctccgtcccaaaata 32
||||||||||||||||||||||
Sbjct: 4 ctactccctccgtcccaaaata 25
>RF00906;MIR1122;AACV01020861.1/25006-25108 39947:Oryza sativa
Japonica Group
Length = 103
Score = 44.1 bits (22), Expect = 4e-04
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 12 tactccctccgtcccaaaataa 33
||||||||||||||||||||||
Sbjct: 5 tactccctccgtcccaaaataa 26
Score = 44.1 bits (22), Expect = 4e-04
Identities = 22/22 (100%)
Strand = Plus / Minus
Query: 12 tactccctccgtcccaaaataa 33
||||||||||||||||||||||
Sbjct: 99 tactccctccgtcccaaaataa 78
>RF00906;MIR1122;AACV01009606.1/13757-13637 39947:Oryza sativa
Japonica Group
Length = 121
Score = 44.1 bits (22), Expect = 4e-04
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 12 tactccctccgtcccaaaataa 33
||||||||||||||||||||||
Sbjct: 5 tactccctccgtcccaaaataa 26
>RF00906;MIR1122;AP008213.1/3607812-3607697 39947:Oryza sativa
Japonica Group
Length = 116
Score = 44.1 bits (22), Expect = 4e-04
Identities = 22/22 (100%)
Strand = Plus / Minus
Query: 11 ctactccctccgtcccaaaata 32
||||||||||||||||||||||
Sbjct: 113 ctactccctccgtcccaaaata 92
>RF00906;MIR1122;AAAA02009296.1/3612-3735 39946:Oryza sativa Indica
Group
Length = 124
Score = 44.1 bits (22), Expect = 4e-04
Identities = 22/22 (100%)
Strand = Plus / Minus
Query: 11 ctactccctccgtcccaaaata 32
||||||||||||||||||||||
Sbjct: 121 ctactccctccgtcccaaaata 100
>RF00906;MIR1122;AP008216.1/22670503-22670626 39947:Oryza sativa
Japonica Group
Length = 124
Score = 44.1 bits (22), Expect = 4e-04
Identities = 22/22 (100%)
Strand = Plus / Minus
Query: 11 ctactccctccgtcccaaaata 32
||||||||||||||||||||||
Sbjct: 121 ctactccctccgtcccaaaata 100
>RF00906;MIR1122;AAAA02005682.1/11197-11089 39946:Oryza sativa
Indica Group
Length = 109
Score = 44.1 bits (22), Expect = 4e-04
Identities = 22/22 (100%)
Strand = Plus / Minus
Query: 11 ctactccctccgtcccaaaata 32
||||||||||||||||||||||
Sbjct: 106 ctactccctccgtcccaaaata 85
>RF00906;MIR1122;AC229754.2/94242-94126 63629:Oryza minuta
Length = 117
Score = 44.1 bits (22), Expect = 4e-04
Identities = 22/22 (100%)
Strand = Plus / Minus
Query: 12 tactccctccgtcccaaaataa 33
||||||||||||||||||||||
Sbjct: 113 tactccctccgtcccaaaataa 92
>RF00906;MIR1122;AAAA02014858.1/50124-50003 39946:Oryza sativa
Indica Group
Length = 122
Score = 44.1 bits (22), Expect = 4e-04
Identities = 25/26 (96%)
Strand = Plus / Plus
Query: 11 ctactccctccgtcccaaaataagtg 36
|||||||||||||||||| |||||||
Sbjct: 4 ctactccctccgtcccaatataagtg 29
>RF00906;MIR1122;AL662959.3/95147-95258 39947:Oryza sativa
Japonica Group
Length = 112
Score = 44.1 bits (22), Expect = 4e-04
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 11 ctactccctccgtcccaaaata 32
||||||||||||||||||||||
Sbjct: 4 ctactccctccgtcccaaaata 25
>RF00906;MIR1122;AAAA02028032.1/2328-2217 39946:Oryza sativa Indica
Group
Length = 112
Score = 44.1 bits (22), Expect = 4e-04
Identities = 22/22 (100%)
Strand = Plus / Minus
Query: 11 ctactccctccgtcccaaaata 32
||||||||||||||||||||||
Sbjct: 109 ctactccctccgtcccaaaata 88
>RF00906;MIR1122;AAAA02000569.1/43583-43659 39946:Oryza sativa
Indica Group
Length = 77
Score = 44.1 bits (22), Expect = 4e-04
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 11 ctactccctccgtcccaaaata 32
||||||||||||||||||||||
Sbjct: 4 ctactccctccgtcccaaaata 25
>RF00906;MIR1122;AL662977.3/22853-22707 39947:Oryza sativa Japonica
Group
Length = 147
Score = 44.1 bits (22), Expect = 4e-04
Identities = 22/22 (100%)
Strand = Plus / Minus
Query: 11 ctactccctccgtcccaaaata 32
||||||||||||||||||||||
Sbjct: 144 ctactccctccgtcccaaaata 123
>RF00906;MIR1122;CT827956.1/52813-52688 4530:Oryza sativa (rice)
Length = 126
Score = 44.1 bits (22), Expect = 4e-04
Identities = 22/22 (100%)
Strand = Plus / Minus
Query: 11 ctactccctccgtcccaaaata 32
||||||||||||||||||||||
Sbjct: 123 ctactccctccgtcccaaaata 102
>RF00906;MIR1122;AACV01001981.1/7100-7193 39947:Oryza sativa
Japonica Group
Length = 94
Score = 44.1 bits (22), Expect = 4e-04
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 12 tactccctccgtcccaaaataa 33
||||||||||||||||||||||
Sbjct: 5 tactccctccgtcccaaaataa 26
>RF00906;MIR1122;AC138197.3/31250-31161 39947:Oryza sativa
Japonica Group
Length = 90
Score = 44.1 bits (22), Expect = 4e-04
Identities = 22/22 (100%)
Strand = Plus / Minus
Query: 11 ctactccctccgtcccaaaata 32
||||||||||||||||||||||
Sbjct: 87 ctactccctccgtcccaaaata 66
>RF00906;MIR1122;AC137593.2/94685-94531 39947:Oryza sativa Japonica
Group
Length = 155
Score = 44.1 bits (22), Expect = 4e-04
Identities = 22/22 (100%)
Strand = Plus / Minus
Query: 11 ctactccctccgtcccaaaata 32
||||||||||||||||||||||
Sbjct: 152 ctactccctccgtcccaaaata 131
>RF00906;MIR1122;AACV01025228.1/13353-13452 39947:Oryza sativa
Japonica Group
Length = 100
Score = 44.1 bits (22), Expect = 4e-04
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 11 ctactccctccgtcccaaaata 32
||||||||||||||||||||||
Sbjct: 4 ctactccctccgtcccaaaata 25
>RF00906;MIR1122;AL831796.5/20323-20408 4530:Oryza sativa (rice)
Length = 86
Score = 44.1 bits (22), Expect = 4e-04
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 11 ctactccctccgtcccaaaata 32
||||||||||||||||||||||
Sbjct: 4 ctactccctccgtcccaaaata 25
>RF00906;MIR1122;AACV01024802.1/12019-12139 39947:Oryza sativa
Japonica Group
Length = 121
Score = 44.1 bits (22), Expect = 4e-04
Identities = 22/22 (100%)
Strand = Plus / Minus
Query: 11 ctactccctccgtcccaaaata 32
||||||||||||||||||||||
Sbjct: 118 ctactccctccgtcccaaaata 97
>RF00906;MIR1122;AACV01012472.1/10900-10769 39947:Oryza sativa
Japonica Group
Length = 132
Score = 44.1 bits (22), Expect = 4e-04
Identities = 22/22 (100%)
Strand = Plus / Minus
Query: 11 ctactccctccgtcccaaaata 32
||||||||||||||||||||||
Sbjct: 129 ctactccctccgtcccaaaata 108
>RF00906;MIR1122;AK242602.1/3859-3737 39947:Oryza sativa Japonica
Group
Length = 123
Score = 44.1 bits (22), Expect = 4e-04
Identities = 22/22 (100%)
Strand = Plus / Minus
Query: 11 ctactccctccgtcccaaaata 32
||||||||||||||||||||||
Sbjct: 120 ctactccctccgtcccaaaata 99
>RF00906;MIR1122;AC078829.10/4988-5143 39947:Oryza sativa Japonica
Group
Length = 156
Score = 44.1 bits (22), Expect = 4e-04
Identities = 22/22 (100%)
Strand = Plus / Minus
Query: 11 ctactccctccgtcccaaaata 32
||||||||||||||||||||||
Sbjct: 153 ctactccctccgtcccaaaata 132
>RF00906;MIR1122;AAAA02015438.1/12525-12421 39946:Oryza sativa
Indica Group
Length = 105
Score = 44.1 bits (22), Expect = 4e-04
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 11 ctactccctccgtcccaaaata 32
||||||||||||||||||||||
Sbjct: 4 ctactccctccgtcccaaaata 25
>RF00906;MIR1122;AAAA02019483.1/16379-16491 39946:Oryza sativa
Indica Group
Length = 113
Score = 44.1 bits (22), Expect = 4e-04
Identities = 22/22 (100%)
Strand = Plus / Minus
Query: 12 tactccctccgtcccaaaataa 33
||||||||||||||||||||||
Sbjct: 109 tactccctccgtcccaaaataa 88
>RF00906;MIR1122;AAAA02034107.1/9075-8937 39946:Oryza sativa Indica
Group
Length = 139
Score = 44.1 bits (22), Expect = 4e-04
Identities = 22/22 (100%)
Strand = Plus / Minus
Query: 11 ctactccctccgtcccaaaata 32
||||||||||||||||||||||
Sbjct: 136 ctactccctccgtcccaaaata 115
>RF00906;MIR1122;AP008212.1/6831401-6831305 39947:Oryza sativa
Japonica Group
Length = 97
Score = 44.1 bits (22), Expect = 4e-04
Identities = 22/22 (100%)
Strand = Plus / Minus
Query: 12 tactccctccgtcccaaaataa 33
||||||||||||||||||||||
Sbjct: 93 tactccctccgtcccaaaataa 72
>RF00906;MIR1122;AAAA02018626.1/12551-12423 39946:Oryza sativa
Indica Group
Length = 129
Score = 44.1 bits (22), Expect = 4e-04
Identities = 25/26 (96%)
Strand = Plus / Plus
Query: 87 ttattttgcgacggagggagtattgt 112
|||||||| |||||||||||||||||
Sbjct: 104 ttattttgggacggagggagtattgt 129
Score = 44.1 bits (22), Expect = 4e-04
Identities = 22/22 (100%)
Strand = Plus / Minus
Query: 12 tactccctccgtcccaaaataa 33
||||||||||||||||||||||
Sbjct: 125 tactccctccgtcccaaaataa 104
>RF00906;MIR1122;AL606656.3/84170-84034 39947:Oryza sativa Japonica
Group
Length = 137
Score = 44.1 bits (22), Expect = 4e-04
Identities = 25/26 (96%)
Strand = Plus / Minus
Query: 11 ctactccctccgtcccaaaataagtg 36
|||||||||||||||||| |||||||
Sbjct: 134 ctactccctccgtcccaatataagtg 109
>RF00906;MIR1122;AP003866.3/59767-59922 39947:Oryza sativa Japonica
Group
Length = 156
Score = 44.1 bits (22), Expect = 4e-04
Identities = 22/22 (100%)
Strand = Plus / Minus
Query: 11 ctactccctccgtcccaaaata 32
||||||||||||||||||||||
Sbjct: 153 ctactccctccgtcccaaaata 132
>RF00906;MIR1122;AAAA02005722.1/24068-24224 39946:Oryza sativa
Indica Group
Length = 157
Score = 44.1 bits (22), Expect = 4e-04
Identities = 22/22 (100%)
Strand = Plus / Minus
Query: 11 ctactccctccgtcccaaaata 32
||||||||||||||||||||||
Sbjct: 154 ctactccctccgtcccaaaata 133
>RF00906;MIR1122;AACV01001520.1/25871-25960 39947:Oryza sativa
Japonica Group
Length = 90
Score = 44.1 bits (22), Expect = 4e-04
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 12 tactccctccgtcccaaaataa 33
||||||||||||||||||||||
Sbjct: 5 tactccctccgtcccaaaataa 26
>RF00906;MIR1122;AL731597.3/103356-103467 39947:Oryza sativa
Japonica Group
Length = 112
Score = 44.1 bits (22), Expect = 4e-04
Identities = 22/22 (100%)
Strand = Plus / Minus
Query: 11 ctactccctccgtcccaaaata 32
||||||||||||||||||||||
Sbjct: 109 ctactccctccgtcccaaaata 88
>RF00906;MIR1122;AACV01023162.1/1695-1577 39947:Oryza sativa
Japonica Group
Length = 119
Score = 44.1 bits (22), Expect = 4e-04
Identities = 22/22 (100%)
Strand = Plus / Minus
Query: 11 ctactccctccgtcccaaaata 32
||||||||||||||||||||||
Sbjct: 116 ctactccctccgtcccaaaata 95
>RF00906;MIR1122;AAAA02006222.1/38105-37993 39946:Oryza sativa
Indica Group
Length = 113
Score = 44.1 bits (22), Expect = 4e-04
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 12 tactccctccgtcccaaaataa 33
||||||||||||||||||||||
Sbjct: 5 tactccctccgtcccaaaataa 26
>RF00906;MIR1122;AC121366.4/55476-55582 39947:Oryza sativa Japonica
Group
Length = 107
Score = 44.1 bits (22), Expect = 4e-04
Identities = 22/22 (100%)
Strand = Plus / Minus
Query: 11 ctactccctccgtcccaaaata 32
||||||||||||||||||||||
Sbjct: 104 ctactccctccgtcccaaaata 83
