miRNEST 2.0, an integrative microRNA resource :: BLAST
>48648_hpr-miR1120:pmrd
Length = 85
Score = 58.0 bits (29), Expect = 2e-09
Identities = 38/41 (92%)
Strand = Plus / Plus
Query: 68 tagtacaaagttgtgacacttattttgggacggagggagta 108
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Sbjct: 40 tagtataaagttgagtcacttattttgggacggagggagta 80
Score = 56.0 bits (28), Expect = 6e-09
Identities = 31/32 (96%)
Strand = Plus / Minus
Query: 11 atactccctccgttccaaaataagtgactcaa 42
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Sbjct: 81 atactccctccgtcccaaaataagtgactcaa 50
Score = 54.0 bits (27), Expect = 2e-08
Identities = 33/35 (94%)
Strand = Plus / Minus
Query: 74 aaagttgtgacacttattttgggacggagggagta 108
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Sbjct: 40 aaagttgagtcacttattttgggacggagggagta 6
Score = 54.0 bits (27), Expect = 2e-08
Identities = 30/31 (96%)
Strand = Plus / Plus
Query: 12 tactccctccgttccaaaataagtgactcaa 42
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Sbjct: 6 tactccctccgtcccaaaataagtgactcaa 36
>49596_osa-miRf10381-akr:pmrd
Length = 147
Score = 50.1 bits (25), Expect = 4e-07
Identities = 25/25 (100%)
Strand = Plus / Minus
Query: 84 cacttattttgggacggagggagta 108
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Sbjct: 25 cacttattttgggacggagggagta 1
Score = 42.1 bits (21), Expect = 9e-05
Identities = 24/25 (96%)
Strand = Plus / Plus
Query: 12 tactccctccgttccaaaataagtg 36
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Sbjct: 1 tactccctccgtcccaaaataagtg 25
>50820_osa-miRf11605-akr:pmrd
Length = 101
Score = 48.1 bits (24), Expect = 1e-06
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 85 acttattttgggacggagggagta 108
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Sbjct: 72 acttattttgggacggagggagta 95
Score = 40.1 bits (20), Expect = 4e-04
Identities = 23/24 (95%)
Strand = Plus / Minus
Query: 12 tactccctccgttccaaaataagt 35
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Sbjct: 95 tactccctccgtcccaaaataagt 72
>50819_osa-miRf11604-akr:pmrd
Length = 101
Score = 48.1 bits (24), Expect = 1e-06
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 85 acttattttgggacggagggagta 108
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Sbjct: 72 acttattttgggacggagggagta 95
Score = 40.1 bits (20), Expect = 4e-04
Identities = 23/24 (95%)
Strand = Plus / Minus
Query: 12 tactccctccgttccaaaataagt 35
|||||||||||| |||||||||||
Sbjct: 95 tactccctccgtcccaaaataagt 72
>50818_osa-miRf11603-akr:pmrd
Length = 101
Score = 48.1 bits (24), Expect = 1e-06
Identities = 24/24 (100%)
Strand = Plus / Minus
Query: 85 acttattttgggacggagggagta 108
||||||||||||||||||||||||
Sbjct: 30 acttattttgggacggagggagta 7
Score = 40.1 bits (20), Expect = 4e-04
Identities = 23/24 (95%)
Strand = Plus / Plus
Query: 12 tactccctccgttccaaaataagt 35
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Sbjct: 7 tactccctccgtcccaaaataagt 30
>49314_osa-miRf10099-akr:pmrd
Length = 144
Score = 48.1 bits (24), Expect = 1e-06
Identities = 24/24 (100%)
Strand = Plus / Minus
Query: 88 tattttgggacggagggagtacta 111
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Sbjct: 34 tattttgggacggagggagtacta 11
>46908_ata-miR1120:pmrd
Length = 85
Score = 48.1 bits (24), Expect = 1e-06
Identities = 56/64 (87%), Gaps = 2/64 (3%)
Strand = Plus / Plus
Query: 18 ctccgttccaaaataagtgactcaagcttagtac-aactttgtactagagctagtacaaa 76
||||||||||||||| |||||||| ||| |||| || ||||||||| || |||||||||
Sbjct: 1 ctccgttccaaaatagatgactcaa-ctttgtactaattttgtactatagttagtacaaa 59
Query: 77 gttg 80
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Sbjct: 60 gttg 63
>49154_osa-miR1862c:pmrd
Length = 89
Score = 46.1 bits (23), Expect = 6e-06
Identities = 23/23 (100%)
Strand = Plus / Minus
Query: 85 acttattttgggacggagggagt 107
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Sbjct: 23 acttattttgggacggagggagt 1
