miRNEST 2.0, an integrative microRNA resource :: BLAST
BLASTN 2.2.20 [Feb-08-2009]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
>40408_ahy-MIR3509:mirbase
Length = 146
Score = 149 bits (75), Expect = 7e-37
Identities = 99/107 (92%)
Strand = Plus / Minus
Query: 8 taaggtgaaaactcgggtgaagtcgacttcacgtgaagttgatatctgagagctattaga 67
|||||||||||||| |||||||| |||||||||||||||||||||||||||| |||||
Sbjct: 128 taaggtgaaaactcaggtgaagttgacttcacgtgaagttgatatctgagagtcgttaga 69
Query: 68 tgaaaatttagtcaaatcaattaaatcatctaacgactctcaggtat 114
||||||||||||||||||||| ||||||||||||| |||||| ||||
Sbjct: 68 tgaaaatttagtcaaatcaatcaaatcatctaacggctctcaagtat 22
Score = 67.9 bits (34), Expect = 2e-12
Identities = 55/62 (88%)
Strand = Plus / Plus
Query: 93 tcatctaacgactctcaggtatcaacttaacgtaaaatcgactgcacctgagtttccacc 152
|||||||||||||||||| ||||||||| |||| || || ||| ||||||||||| ||||
Sbjct: 66 tcatctaacgactctcagatatcaacttcacgtgaagtcaacttcacctgagttttcacc 125
Query: 153 tt 154
||
Sbjct: 126 tt 127
>40407_ahy-MIR3509:mirbase
Length = 146
Score = 149 bits (75), Expect = 7e-37
Identities = 99/107 (92%)
Strand = Plus / Minus
Query: 8 taaggtgaaaactcgggtgaagtcgacttcacgtgaagttgatatctgagagctattaga 67
|||||||||||||| |||||||| |||||||||||||||||||||||||||| |||||
Sbjct: 128 taaggtgaaaactcaggtgaagttgacttcacgtgaagttgatatctgagagtcgttaga 69
Query: 68 tgaaaatttagtcaaatcaattaaatcatctaacgactctcaggtat 114
||||||||||||||||||||| ||||||||||||| |||||| ||||
Sbjct: 68 tgaaaatttagtcaaatcaatcaaatcatctaacggctctcaagtat 22
Score = 67.9 bits (34), Expect = 2e-12
Identities = 55/62 (88%)
Strand = Plus / Plus
Query: 93 tcatctaacgactctcaggtatcaacttaacgtaaaatcgactgcacctgagtttccacc 152
|||||||||||||||||| ||||||||| |||| || || ||| ||||||||||| ||||
Sbjct: 66 tcatctaacgactctcagatatcaacttcacgtgaagtcaacttcacctgagttttcacc 125
Query: 153 tt 154
||
Sbjct: 126 tt 127
