miRNEST 2.0, an integrative microRNA resource :: BLAST
BLASTN 2.2.20 [Feb-08-2009]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
>RF00906;MIR1122;AP008217.1/6570444-6570554 39947:Oryza sativa
Japonica Group
Length = 111
Score = 58.0 bits (29), Expect = 2e-08
Identities = 29/29 (100%)
Strand = Plus / Plus
Query: 9 tactactccctccgtcctaaaatgtaaga 37
|||||||||||||||||||||||||||||
Sbjct: 2 tactactccctccgtcctaaaatgtaaga 30
>RF00906;MIR1122;AY663391.1/33436-33528 4571:Triticum turgidum
Length = 93
Score = 52.0 bits (26), Expect = 1e-06
Identities = 32/34 (94%)
Strand = Plus / Minus
Query: 12 tactccctccgtcctaaaatgtaagacgtttttt 45
|||||||||||||| | |||||||||||||||||
Sbjct: 89 tactccctccgtcccataatgtaagacgtttttt 56
>RF00906;MIR1122;AF459639.1/39710-39600 4568:Triticum monococcum
Length = 111
Score = 52.0 bits (26), Expect = 1e-06
Identities = 32/34 (94%)
Strand = Plus / Plus
Query: 12 tactccctccgtcctaaaatgtaagacgtttttt 45
|||||||||||||| | |||||||||||||||||
Sbjct: 5 tactccctccgtcccataatgtaagacgtttttt 38
Score = 48.1 bits (24), Expect = 2e-05
Identities = 33/36 (91%)
Strand = Plus / Minus
Query: 10 actactccctccgtcctaaaatgtaagacgtttttt 45
|||||||||||||||| | |||||| ||||||||||
Sbjct: 109 actactccctccgtcccataatgtaggacgtttttt 74
>RF00906;MIR1122;AAAA02011454.1/9285-9412 39946:Oryza sativa Indica
Group
Length = 128
Score = 52.0 bits (26), Expect = 1e-06
Identities = 26/26 (100%)
Strand = Plus / Minus
Query: 11 ctactccctccgtcctaaaatgtaag 36
||||||||||||||||||||||||||
Sbjct: 125 ctactccctccgtcctaaaatgtaag 100
Score = 42.1 bits (21), Expect = 0.001
Identities = 24/25 (96%)
Strand = Plus / Plus
Query: 12 tactccctccgtcctaaaatgtaag 36
||||||||||||| |||||||||||
Sbjct: 5 tactccctccgtcttaaaatgtaag 29
>RF00906;MIR1122;AP008218.1/11741623-11741744 39947:Oryza sativa
Japonica Group
Length = 122
Score = 52.0 bits (26), Expect = 1e-06
Identities = 32/34 (94%)
Strand = Plus / Plus
Query: 10 actactccctccgtcctaaaatgtaagacgtttt 43
|||||||||||||||||||||| ||||| |||||
Sbjct: 3 actactccctccgtcctaaaatataagaagtttt 36
>RF00906;MIR1122;AP008214.1/19205826-19205903 39947:Oryza sativa
Japonica Group
Length = 78
Score = 52.0 bits (26), Expect = 1e-06
Identities = 29/30 (96%)
Strand = Plus / Minus
Query: 8 atactactccctccgtcctaaaatgtaaga 37
|||||||||||||||||||||||| |||||
Sbjct: 78 atactactccctccgtcctaaaatataaga 49
>RF00906;MIR1122;AP008209.1/35984076-35984203 39947:Oryza sativa
Japonica Group
Length = 128
Score = 50.1 bits (25), Expect = 4e-06
Identities = 25/25 (100%)
Strand = Plus / Plus
Query: 12 tactccctccgtcctaaaatgtaag 36
|||||||||||||||||||||||||
Sbjct: 5 tactccctccgtcctaaaatgtaag 29
>RF00906;MIR1122;DJ053679.1/1921-2077 4530:Oryza sativa (rice)
Length = 157
Score = 50.1 bits (25), Expect = 4e-06
Identities = 28/29 (96%)
Strand = Plus / Minus
Query: 8 atactactccctccgtcctaaaatgtaag 36
|||||||||||||||||||||||| ||||
Sbjct: 157 atactactccctccgtcctaaaatataag 129
>RF00906;MIR1122;AACV01018440.1/8398-8301 39947:Oryza sativa
Japonica Group
Length = 98
Score = 50.1 bits (25), Expect = 4e-06
Identities = 25/25 (100%)
Strand = Plus / Plus
Query: 44 ttacattttgggacggagggagtaa 68
|||||||||||||||||||||||||
Sbjct: 71 ttacattttgggacggagggagtaa 95
Score = 42.1 bits (21), Expect = 0.001
Identities = 24/25 (96%)
Strand = Plus / Minus
Query: 12 tactccctccgtcctaaaatgtaag 36
|||||||||||||| ||||||||||
Sbjct: 94 tactccctccgtcccaaaatgtaag 70
>RF00906;MIR1122;AL845346.4/42836-42971 4530:Oryza sativa (rice)
Length = 136
Score = 50.1 bits (25), Expect = 4e-06
Identities = 25/25 (100%)
Strand = Plus / Plus
Query: 12 tactccctccgtcctaaaatgtaag 36
|||||||||||||||||||||||||
Sbjct: 5 tactccctccgtcctaaaatgtaag 29
>RF00906;MIR1122;AC161407.5/87285-87421 3880:Medicago truncatula
(barrel medic)
Length = 137
Score = 48.1 bits (24), Expect = 2e-05
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 44 ttacattttgggacggagggagta 67
||||||||||||||||||||||||
Sbjct: 110 ttacattttgggacggagggagta 133
Score = 46.1 bits (23), Expect = 6e-05
Identities = 26/27 (96%)
Strand = Plus / Minus
Query: 10 actactccctccgtcctaaaatgtaag 36
|||||||||||||||| ||||||||||
Sbjct: 135 actactccctccgtcccaaaatgtaag 109
>RF00906;MIR1122;CR954190.2/110040-110176 3880:Medicago truncatula
(barrel medic)
Length = 137
Score = 48.1 bits (24), Expect = 2e-05
Identities = 24/24 (100%)
Strand = Plus / Minus
Query: 44 ttacattttgggacggagggagta 67
||||||||||||||||||||||||
Sbjct: 28 ttacattttgggacggagggagta 5
Score = 48.1 bits (24), Expect = 2e-05
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 44 ttacattttgggacggagggagta 67
||||||||||||||||||||||||
Sbjct: 110 ttacattttgggacggagggagta 133
Score = 42.1 bits (21), Expect = 0.001
Identities = 24/25 (96%)
Strand = Plus / Plus
Query: 12 tactccctccgtcctaaaatgtaag 36
|||||||||||||| ||||||||||
Sbjct: 5 tactccctccgtcccaaaatgtaag 29
Score = 42.1 bits (21), Expect = 0.001
Identities = 24/25 (96%)
Strand = Plus / Minus
Query: 12 tactccctccgtcctaaaatgtaag 36
|||||||||||||| ||||||||||
Sbjct: 133 tactccctccgtcccaaaatgtaag 109
>RF00906;MIR1122;AAAA02033663.1/22175-22286 39946:Oryza sativa
Indica Group
Length = 112
Score = 48.1 bits (24), Expect = 2e-05
Identities = 24/24 (100%)
Strand = Plus / Minus
Query: 44 ttacattttgggacggagggagta 67
||||||||||||||||||||||||
Sbjct: 28 ttacattttgggacggagggagta 5
Score = 44.1 bits (22), Expect = 2e-04
Identities = 25/26 (96%)
Strand = Plus / Plus
Query: 11 ctactccctccgtcctaaaatgtaag 36
||||||||||||||| ||||||||||
Sbjct: 4 ctactccctccgtcccaaaatgtaag 29
>RF00906;MIR1122;AAAA02025080.1/2043-2177 39946:Oryza sativa
Indica Group
Length = 135
Score = 48.1 bits (24), Expect = 2e-05
Identities = 27/28 (96%)
Strand = Plus / Minus
Query: 41 tttttacattttgggacggagggagtaa 68
|||||| |||||||||||||||||||||
Sbjct: 31 tttttatattttgggacggagggagtaa 4
>RF00906;MIR1122;AP008215.1/20036672-20036557 39947:Oryza sativa
Japonica Group
Length = 116
Score = 48.1 bits (24), Expect = 2e-05
Identities = 24/24 (100%)
Strand = Plus / Minus
Query: 44 ttacattttgggacggagggagta 67
||||||||||||||||||||||||
Sbjct: 28 ttacattttgggacggagggagta 5
Score = 44.1 bits (22), Expect = 2e-04
Identities = 25/26 (96%)
Strand = Plus / Plus
Query: 11 ctactccctccgtcctaaaatgtaag 36
||||||||||||||| ||||||||||
Sbjct: 4 ctactccctccgtcccaaaatgtaag 29
>RF00906;MIR1122;AP003913.3/29133-29264 39947:Oryza sativa
Japonica Group
Length = 132
Score = 48.1 bits (24), Expect = 2e-05
Identities = 27/28 (96%)
Strand = Plus / Minus
Query: 41 tttttacattttgggacggagggagtaa 68
|||||| |||||||||||||||||||||
Sbjct: 31 tttttatattttgggacggagggagtaa 4
>RF00906;MIR1122;AP005510.3/22168-22263 39947:Oryza sativa
Japonica Group
Length = 96
Score = 48.1 bits (24), Expect = 2e-05
Identities = 27/28 (96%)
Strand = Plus / Plus
Query: 9 tactactccctccgtcctaaaatgtaag 36
||||||||||||||||| ||||||||||
Sbjct: 2 tactactccctccgtcccaaaatgtaag 29
Score = 48.1 bits (24), Expect = 2e-05
Identities = 24/24 (100%)
Strand = Plus / Minus
Query: 44 ttacattttgggacggagggagta 67
||||||||||||||||||||||||
Sbjct: 28 ttacattttgggacggagggagta 5
>RF00906;MIR1122;AP005399.3/486-590 39947:Oryza sativa Japonica
Group
Length = 105
Score = 48.1 bits (24), Expect = 2e-05
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 44 ttacattttgggacggagggagta 67
||||||||||||||||||||||||
Sbjct: 78 ttacattttgggacggagggagta 101
Score = 44.1 bits (22), Expect = 2e-04
Identities = 25/26 (96%)
Strand = Plus / Minus
Query: 11 ctactccctccgtcctaaaatgtaag 36
||||||||||||||| ||||||||||
Sbjct: 102 ctactccctccgtcccaaaatgtaag 77
>RF00906;MIR1122;AL662938.3/6940-7051 39947:Oryza sativa Japonica
Group
Length = 112
Score = 48.1 bits (24), Expect = 2e-05
Identities = 24/24 (100%)
Strand = Plus / Minus
Query: 44 ttacattttgggacggagggagta 67
||||||||||||||||||||||||
Sbjct: 28 ttacattttgggacggagggagta 5
Score = 42.1 bits (21), Expect = 0.001
Identities = 24/25 (96%)
Strand = Plus / Plus
Query: 12 tactccctccgtcctaaaatgtaag 36
|||||||||||||| ||||||||||
Sbjct: 5 tactccctccgtcccaaaatgtaag 29
>RF00906;MIR1122;AP005676.3/140751-140855 39947:Oryza sativa
Japonica Group
Length = 105
Score = 48.1 bits (24), Expect = 2e-05
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 44 ttacattttgggacggagggagta 67
||||||||||||||||||||||||
Sbjct: 78 ttacattttgggacggagggagta 101
Score = 44.1 bits (22), Expect = 2e-04
Identities = 25/26 (96%)
Strand = Plus / Minus
Query: 11 ctactccctccgtcctaaaatgtaag 36
||||||||||||||| ||||||||||
Sbjct: 102 ctactccctccgtcccaaaatgtaag 77
>RF00906;MIR1122;AACV01018660.1/8916-9023 39947:Oryza sativa
Japonica Group
Length = 108
Score = 48.1 bits (24), Expect = 2e-05
Identities = 24/24 (100%)
Strand = Plus / Minus
Query: 44 ttacattttgggacggagggagta 67
||||||||||||||||||||||||
Sbjct: 28 ttacattttgggacggagggagta 5
>RF00906;MIR1122;AAAA02006222.1/38105-37993 39946:Oryza sativa
Indica Group
Length = 113
Score = 48.1 bits (24), Expect = 2e-05
Identities = 24/24 (100%)
Strand = Plus / Minus
Query: 48 attttgggacggagggagtaagta 71
||||||||||||||||||||||||
Sbjct: 24 attttgggacggagggagtaagta 1
>RF01058;MIR806;AC232167.1/58295-58055 63629:Oryza minuta
Length = 241
Score = 46.1 bits (23), Expect = 6e-05
Identities = 23/23 (100%)
Strand = Plus / Minus
Query: 45 tacattttgggacggagggagta 67
|||||||||||||||||||||||
Sbjct: 24 tacattttgggacggagggagta 2
>RF01058;MIR806;AAAA02017199.1/23024-23263 39946:Oryza sativa
Indica Group
Length = 240
Score = 46.1 bits (23), Expect = 6e-05
Identities = 23/23 (100%)
Strand = Plus / Minus
Query: 45 tacattttgggacggagggagta 67
|||||||||||||||||||||||
Sbjct: 24 tacattttgggacggagggagta 2
>RF00906;MIR1122;EU626553.1/80596-80503 4572:Triticum urartu
Length = 94
Score = 46.1 bits (23), Expect = 6e-05
Identities = 32/35 (91%)
Strand = Plus / Minus
Query: 12 tactccctccgtcctaaaatgtaagacgtttttta 46
|||||||||||||| | |||||||||| |||||||
Sbjct: 90 tactccctccgtcccataatgtaagacatttttta 56
>RF00906;MIR1122;EU187471.1/291-190 40247:Dasypyrum villosum
Length = 102
Score = 46.1 bits (23), Expect = 6e-05
Identities = 32/35 (91%)
Strand = Plus / Plus
Query: 11 ctactccctccgtcctaaaatgtaagacgtttttt 45
||||| ||||||||| | |||||||||||||||||
Sbjct: 4 ctacttcctccgtcccataatgtaagacgtttttt 38
>RF00906;MIR1122;EF059989.1/67769-67635 29664:Brachypodium
sylvaticum
Length = 135
Score = 46.1 bits (23), Expect = 6e-05
Identities = 23/23 (100%)
Strand = Plus / Minus
Query: 8 atactactccctccgtcctaaaa 30
|||||||||||||||||||||||
Sbjct: 135 atactactccctccgtcctaaaa 113
>RF00906;MIR1122;AACV01014487.1/12034-11914 39947:Oryza sativa
Japonica Group
Length = 121
Score = 46.1 bits (23), Expect = 6e-05
Identities = 26/27 (96%)
Strand = Plus / Plus
Query: 45 tacattttgggacggagggagtaagta 71
|||||||||||||||||| ||||||||
Sbjct: 95 tacattttgggacggaggaagtaagta 121
>RF00906;MIR1122;AL831801.4/77594-77709 4530:Oryza sativa (rice)
Length = 116
Score = 46.1 bits (23), Expect = 6e-05
Identities = 23/23 (100%)
Strand = Plus / Minus
Query: 45 tacattttgggacggagggagta 67
|||||||||||||||||||||||
Sbjct: 27 tacattttgggacggagggagta 5
>RF00906;MIR1122;AC135864.5/73183-73340 39947:Oryza sativa
Japonica Group
Length = 158
Score = 46.1 bits (23), Expect = 6e-05
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 12 tactccctccgtcctaaaatgta 34
|||||||||||||||||||||||
Sbjct: 5 tactccctccgtcctaaaatgta 27
Score = 44.1 bits (22), Expect = 2e-04
Identities = 25/26 (96%)
Strand = Plus / Minus
Query: 12 tactccctccgtcctaaaatgtaaga 37
|||||||||||||||||||| |||||
Sbjct: 154 tactccctccgtcctaaaatataaga 129
>RF00906;MIR1122;AACV01005176.1/8457-8346 39947:Oryza sativa
Japonica Group
Length = 112
Score = 46.1 bits (23), Expect = 6e-05
Identities = 26/27 (96%)
Strand = Plus / Plus
Query: 10 actactccctccgtcctaaaatgtaag 36
|||||||||||||||||||||| ||||
Sbjct: 3 actactccctccgtcctaaaatataag 29
>RF00906;MIR1122;AACV01009606.1/13757-13637 39947:Oryza sativa
Japonica Group
Length = 121
Score = 46.1 bits (23), Expect = 6e-05
Identities = 23/23 (100%)
Strand = Plus / Minus
Query: 48 attttgggacggagggagtaagt 70
|||||||||||||||||||||||
Sbjct: 24 attttgggacggagggagtaagt 2
>RF00906;MIR1122;CR855143.1/66136-66012 4530:Oryza sativa (rice)
Length = 125
Score = 46.1 bits (23), Expect = 6e-05
Identities = 26/27 (96%)
Strand = Plus / Plus
Query: 42 ttttacattttgggacggagggagtaa 68
||||| |||||||||||||||||||||
Sbjct: 96 ttttatattttgggacggagggagtaa 122
>RF00906;MIR1122;CT827956.1/52813-52688 4530:Oryza sativa (rice)
Length = 126
Score = 46.1 bits (23), Expect = 6e-05
Identities = 26/27 (96%)
Strand = Plus / Plus
Query: 41 tttttacattttgggacggagggagta 67
|||||| ||||||||||||||||||||
Sbjct: 96 tttttatattttgggacggagggagta 122
>RF00906;MIR1122;AAAA02011966.1/4807-4962 39946:Oryza sativa Indica
Group
Length = 156
Score = 46.1 bits (23), Expect = 6e-05
Identities = 26/27 (96%)
Strand = Plus / Plus
Query: 41 tttttacattttgggacggagggagta 67
|||||| ||||||||||||||||||||
Sbjct: 126 tttttatattttgggacggagggagta 152
>RF00906;MIR1122;AL606691.4/2041-1917 39947:Oryza sativa Japonica
Group
Length = 125
Score = 46.1 bits (23), Expect = 6e-05
Identities = 26/27 (96%)
Strand = Plus / Plus
Query: 42 ttttacattttgggacggagggagtaa 68
||||| |||||||||||||||||||||
Sbjct: 96 ttttatattttgggacggagggagtaa 122
>RF00906;MIR1122;AP008208.1/1673372-1673471 39947:Oryza sativa
Japonica Group
Length = 100
Score = 46.1 bits (23), Expect = 6e-05
Identities = 26/27 (96%)
Strand = Plus / Plus
Query: 10 actactccctccgtcctaaaatgtaag 36
|||||||||||||||||||||| ||||
Sbjct: 3 actactccctccgtcctaaaatataag 29
Score = 44.1 bits (22), Expect = 2e-04
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 48 attttgggacggagggagtaag 69
||||||||||||||||||||||
Sbjct: 77 attttgggacggagggagtaag 98
>RF01058;MIR806;AAAA02026783.1/9702-9457 39946:Oryza sativa Indica
Group
Length = 246
Score = 44.1 bits (22), Expect = 2e-04
Identities = 22/22 (100%)
Strand = Plus / Minus
Query: 46 acattttgggacggagggagta 67
||||||||||||||||||||||
Sbjct: 23 acattttgggacggagggagta 2
>RF01058;MIR806;AACV01014787.1/638-878 39947:Oryza sativa Japonica
Group
Length = 241
Score = 44.1 bits (22), Expect = 2e-04
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 46 acattttgggacggagggagta 67
||||||||||||||||||||||
Sbjct: 219 acattttgggacggagggagta 240
>RF00906;MIR1122;AC127019.29/109198-109062 3880:Medicago
truncatula (barrel medic)
Length = 137
Score = 44.1 bits (22), Expect = 2e-04
Identities = 22/22 (100%)
Strand = Plus / Minus
Query: 44 ttacattttgggacggagggag 65
||||||||||||||||||||||
Sbjct: 28 ttacattttgggacggagggag 7
>RF00906;MIR1122;AF325196.1/34233-34141 4565:Triticum aestivum
(bread wheat)
Length = 93
Score = 44.1 bits (22), Expect = 2e-04
Identities = 38/42 (90%), Gaps = 1/42 (2%)
Strand = Plus / Minus
Query: 10 actactccctccgtcctaaaatgtaag-acgttttttacatt 50
|||||||||||||||| ||||| |||| |||||||| |||||
Sbjct: 91 actactccctccgtcccaaaatataagaacgtttttaacatt 50
>RF00906;MIR1122;AB298184.1/14323-14229 4565:Triticum aestivum
(bread wheat)
Length = 95
Score = 44.1 bits (22), Expect = 2e-04
Identities = 31/34 (91%)
Strand = Plus / Minus
Query: 12 tactccctccgtcctaaaatgtaagacgtttttt 45
|||| ||||||||| | |||||||||||||||||
Sbjct: 91 tacttcctccgtcccataatgtaagacgtttttt 58
>RF00906;MIR1122;EF426564.1/124146-124054 4571:Triticum turgidum
Length = 93
Score = 44.1 bits (22), Expect = 2e-04
Identities = 31/34 (91%)
Strand = Plus / Plus
Query: 12 tactccctccgtcctaaaatgtaagacgtttttt 45
|||||||||||||| | ||||||||| |||||||
Sbjct: 5 tactccctccgtcccataatgtaagaggtttttt 38
>RF00906;MIR1122;DQ537335.1/54883-54975 4565:Triticum aestivum
(bread wheat)
Length = 93
Score = 44.1 bits (22), Expect = 2e-04
Identities = 31/34 (91%)
Strand = Plus / Plus
Query: 12 tactccctccgtcctaaaatgtaagacgtttttt 45
|||||||||||||| | ||||||||||| |||||
Sbjct: 5 tactccctccgtcccataatgtaagacgcttttt 38
>RF00906;MIR1122;AK252392.1/1279-1175 112509:Hordeum vulgare subsp.
vulgare (domesticated barley)
Length = 105
Score = 44.1 bits (22), Expect = 2e-04
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 48 attttgggacggagggagtaag 69
||||||||||||||||||||||
Sbjct: 82 attttgggacggagggagtaag 103
>RF00906;MIR1122;AAAA02018804.1/15100-15261 39946:Oryza sativa
Indica Group
Length = 162
Score = 44.1 bits (22), Expect = 2e-04
Identities = 25/26 (96%)
Strand = Plus / Minus
Query: 12 tactccctccgtcctaaaatgtaaga 37
|||||||||||||||||||| |||||
Sbjct: 158 tactccctccgtcctaaaatataaga 133
>RF00906;MIR1122;AAAA02028442.1/1248-1113 39946:Oryza sativa Indica
Group
Length = 136
Score = 44.1 bits (22), Expect = 2e-04
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 48 attttgggacggagggagtaag 69
||||||||||||||||||||||
Sbjct: 113 attttgggacggagggagtaag 134
>RF00906;MIR1122;AAAA02013867.1/52-181 39946:Oryza sativa Indica
Group
Length = 130
Score = 44.1 bits (22), Expect = 2e-04
Identities = 22/22 (100%)
Strand = Plus / Minus
Query: 10 actactccctccgtcctaaaat 31
||||||||||||||||||||||
Sbjct: 128 actactccctccgtcctaaaat 107
>RF00906;MIR1122;AP008216.1/16569819-16569686 39947:Oryza sativa
Japonica Group
Length = 134
Score = 44.1 bits (22), Expect = 2e-04
Identities = 25/26 (96%)
Strand = Plus / Plus
Query: 11 ctactccctccgtcctaaaatgtaag 36
||||| ||||||||||||||||||||
Sbjct: 4 ctactacctccgtcctaaaatgtaag 29
Score = 42.1 bits (21), Expect = 0.001
Identities = 24/25 (96%)
Strand = Plus / Plus
Query: 43 tttacattttgggacggagggagta 67
|||| ||||||||||||||||||||
Sbjct: 106 tttatattttgggacggagggagta 130
>RF00906;MIR1122;AP008210.1/31519155-31519262 39947:Oryza sativa
Japonica Group
Length = 108
Score = 44.1 bits (22), Expect = 2e-04
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 48 attttgggacggagggagtaag 69
||||||||||||||||||||||
Sbjct: 85 attttgggacggagggagtaag 106
>RF00906;MIR1122;AAAA02034725.1/24676-24788 39946:Oryza sativa
Indica Group
Length = 113
Score = 44.1 bits (22), Expect = 2e-04
Identities = 25/26 (96%)
Strand = Plus / Plus
Query: 12 tactccctccgtcctaaaatgtaaga 37
|||||||||||||||||||| |||||
Sbjct: 5 tactccctccgtcctaaaatataaga 30
>RF00906;MIR1122;AAAA02004745.1/3305-3414 39946:Oryza sativa Indica
Group
Length = 110
Score = 44.1 bits (22), Expect = 2e-04
Identities = 25/26 (96%)
Strand = Plus / Minus
Query: 12 tactccctccgtcctaaaatgtaaga 37
|||||||||||||||||||| |||||
Sbjct: 106 tactccctccgtcctaaaatataaga 81
>RF00906;MIR1122;AP003928.3/87481-87370 39947:Oryza sativa Japonica
Group
Length = 112
Score = 44.1 bits (22), Expect = 2e-04
Identities = 25/26 (96%)
Strand = Plus / Minus
Query: 11 ctactccctccgtcctaaaatgtaag 36
||||||||||||||||||||| ||||
Sbjct: 109 ctactccctccgtcctaaaatataag 84
>RF00906;MIR1122;AP008213.1/5269757-5269875 39947:Oryza sativa
Japonica Group
Length = 119
Score = 44.1 bits (22), Expect = 2e-04
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 49 ttttgggacggagggagtaagt 70
||||||||||||||||||||||
Sbjct: 97 ttttgggacggagggagtaagt 118
>RF00906;MIR1122;AACV01020861.1/25006-25108 39947:Oryza sativa
Japonica Group
Length = 103
Score = 44.1 bits (22), Expect = 2e-04
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 48 attttgggacggagggagtaag 69
||||||||||||||||||||||
Sbjct: 80 attttgggacggagggagtaag 101
>RF00906;MIR1122;AAAA02021241.1/19496-19614 39946:Oryza sativa
Indica Group
Length = 119
Score = 44.1 bits (22), Expect = 2e-04
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 49 ttttgggacggagggagtaagt 70
||||||||||||||||||||||
Sbjct: 97 ttttgggacggagggagtaagt 118
>RF00906;MIR1122;AAAA02010499.1/21534-21382 39946:Oryza sativa
Indica Group
Length = 153
Score = 44.1 bits (22), Expect = 2e-04
Identities = 22/22 (100%)
Strand = Plus / Minus
Query: 10 actactccctccgtcctaaaat 31
||||||||||||||||||||||
Sbjct: 151 actactccctccgtcctaaaat 130
>RF00906;MIR1122;AP003508.3/31246-31125 39947:Oryza sativa
Japonica Group
Length = 122
Score = 44.1 bits (22), Expect = 2e-04
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 10 actactccctccgtcctaaaat 31
||||||||||||||||||||||
Sbjct: 3 actactccctccgtcctaaaat 24
>RF00906;MIR1122;CR855160.1/7113-7006 4530:Oryza sativa (rice)
Length = 108
Score = 44.1 bits (22), Expect = 2e-04
Identities = 22/22 (100%)
Strand = Plus / Minus
Query: 48 attttgggacggagggagtaag 69
||||||||||||||||||||||
Sbjct: 24 attttgggacggagggagtaag 3
>RF01058;MIR806;AAAA02014927.1/5775-5532 39946:Oryza sativa Indica
Group
Length = 244
Score = 42.1 bits (21), Expect = 0.001
Identities = 21/21 (100%)
Strand = Plus / Minus
Query: 48 attttgggacggagggagtaa 68
|||||||||||||||||||||
Sbjct: 21 attttgggacggagggagtaa 1
>RF01058;MIR806;AP008214.1/5532426-5532666 39947:Oryza sativa
Japonica Group
Length = 241
Score = 42.1 bits (21), Expect = 0.001
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 48 attttgggacggagggagtaa 68
|||||||||||||||||||||
Sbjct: 221 attttgggacggagggagtaa 241
>RF01058;MIR806;AP004672.3/126730-126486 39947:Oryza sativa
Japonica Group
Length = 245
Score = 42.1 bits (21), Expect = 0.001
Identities = 21/21 (100%)
Strand = Plus / Minus
Query: 48 attttgggacggagggagtaa 68
|||||||||||||||||||||
Sbjct: 21 attttgggacggagggagtaa 1
>RF01058;MIR806;AACV01005022.1/1990-2230 39947:Oryza sativa Japonica
Group
Length = 241
Score = 42.1 bits (21), Expect = 0.001
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 48 attttgggacggagggagtaa 68
|||||||||||||||||||||
Sbjct: 221 attttgggacggagggagtaa 241
>RF00906;MIR1122;AM932680.1/129176-129267 4565:Triticum aestivum
(bread wheat)
Length = 92
Score = 42.1 bits (21), Expect = 0.001
Identities = 33/37 (89%)
Strand = Plus / Minus
Query: 9 tactactccctccgtcctaaaatgtaagacgtttttt 45
||||||||||||||||| | || |||| |||||||||
Sbjct: 91 tactactccctccgtcccataacgtaatacgtttttt 55
>RF00906;MIR1122;DQ445238.1/5626-5730 112509:Hordeum vulgare
subsp. vulgare (domesticated barley)
Length = 105
Score = 42.1 bits (21), Expect = 0.001
Identities = 21/21 (100%)
Strand = Plus / Minus
Query: 48 attttgggacggagggagtaa 68
|||||||||||||||||||||
Sbjct: 24 attttgggacggagggagtaa 4
>RF00906;MIR1122;EU282755.1/953-849 112509:Hordeum vulgare subsp.
vulgare (domesticated barley)
Length = 105
Score = 42.1 bits (21), Expect = 0.001
Identities = 21/21 (100%)
Strand = Plus / Minus
Query: 48 attttgggacggagggagtaa 68
|||||||||||||||||||||
Sbjct: 24 attttgggacggagggagtaa 4
>RF00906;MIR1122;EU593539.1/914-1018 4513:Hordeum vulgare
Length = 105
Score = 42.1 bits (21), Expect = 0.001
Identities = 21/21 (100%)
Strand = Plus / Minus
Query: 48 attttgggacggagggagtaa 68
|||||||||||||||||||||
Sbjct: 24 attttgggacggagggagtaa 4
>RF00906;MIR1122;FJ436986.1/65183-65072 37682:Aegilops tauschii
Length = 112
Score = 42.1 bits (21), Expect = 0.001
Identities = 33/37 (89%)
Strand = Plus / Plus
Query: 9 tactactccctccgtcctaaaatgtaagacgtttttt 45
|||||||||||| ||| |||||||||||| ||||||
Sbjct: 2 tactactccctctgtctcaaaatgtaagacatttttt 38
>RF00906;MIR1122;DQ247823.1/803-901 4487:Aegilops searsii
Length = 99
Score = 42.1 bits (21), Expect = 0.001
Identities = 27/29 (93%)
Strand = Plus / Minus
Query: 17 cctccgtcctaaaatgtaagacgtttttt 45
||||||||| | |||||||||||||||||
Sbjct: 91 cctccgtcccataatgtaagacgtttttt 63
>RF00906;MIR1122;FJ436986.1/65665-65790 37682:Aegilops tauschii
Length = 126
Score = 42.1 bits (21), Expect = 0.001
Identities = 27/29 (93%)
Strand = Plus / Minus
Query: 17 cctccgtcctaaaatgtaagacgtttttt 45
||||||||| | |||||||||||||||||
Sbjct: 62 cctccgtcccataatgtaagacgtttttt 34
>RF00906;MIR1122;AAAA02007993.1/45532-45643 39946:Oryza sativa
Indica Group
Length = 112
Score = 42.1 bits (21), Expect = 0.001
Identities = 24/25 (96%)
Strand = Plus / Minus
Query: 12 tactccctccgtcctaaaatgtaag 36
|||||||||||||||||||| ||||
Sbjct: 108 tactccctccgtcctaaaatataag 84
>RF00906;MIR1122;AAAA02029963.1/5445-5312 39946:Oryza sativa
Indica Group
Length = 134
Score = 42.1 bits (21), Expect = 0.001
Identities = 24/25 (96%)
Strand = Plus / Plus
Query: 11 ctactccctccgtcctaaaatgtaa 35
||||| |||||||||||||||||||
Sbjct: 4 ctactacctccgtcctaaaatgtaa 28
Score = 42.1 bits (21), Expect = 0.001
Identities = 24/25 (96%)
Strand = Plus / Plus
Query: 43 tttacattttgggacggagggagta 67
|||| ||||||||||||||||||||
Sbjct: 106 tttatattttgggacggagggagta 130
>RF00906;MIR1122;AAAA02021832.1/90208-90105 39946:Oryza sativa
Indica Group
Length = 104
Score = 42.1 bits (21), Expect = 0.001
Identities = 24/25 (96%)
Strand = Plus / Minus
Query: 12 tactccctccgtcctaaaatgtaag 36
|||||||||||||||||||| ||||
Sbjct: 100 tactccctccgtcctaaaatataag 76
>RF00906;MIR1122;AP008213.1/16335065-16334954 39947:Oryza sativa
Japonica Group
Length = 112
Score = 42.1 bits (21), Expect = 0.001
Identities = 24/25 (96%)
Strand = Plus / Minus
Query: 12 tactccctccgtcctaaaatgtaag 36
||||||||||||||||||| |||||
Sbjct: 108 tactccctccgtcctaaaaagtaag 84
>RF00906;MIR1122;AAAA02007259.1/4313-4455 39946:Oryza sativa Indica
Group
Length = 143
Score = 42.1 bits (21), Expect = 0.001
Identities = 24/25 (96%)
Strand = Plus / Minus
Query: 13 actccctccgtcctaaaatgtaaga 37
||||||||||||||||||| |||||
Sbjct: 138 actccctccgtcctaaaatataaga 114
>RF00906;MIR1122;AAAA02036662.1/2377-2433 39946:Oryza sativa
Indica Group
Length = 57
Score = 42.1 bits (21), Expect = 0.001
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 48 attttgggacggagggagtaa 68
|||||||||||||||||||||
Sbjct: 34 attttgggacggagggagtaa 54
>RF00906;MIR1122;AAAA02034559.1/3133-3272 39946:Oryza sativa Indica
Group
Length = 140
Score = 42.1 bits (21), Expect = 0.001
Identities = 21/21 (100%)
Strand = Plus / Minus
Query: 11 ctactccctccgtcctaaaat 31
|||||||||||||||||||||
Sbjct: 137 ctactccctccgtcctaaaat 117
>RF00906;MIR1122;AAAA02005537.1/4098-4188 39946:Oryza sativa
Indica Group
Length = 91
Score = 42.1 bits (21), Expect = 0.001
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 48 attttgggacggagggagtaa 68
|||||||||||||||||||||
Sbjct: 68 attttgggacggagggagtaa 88
>RF00906;MIR1122;AAAA02018853.1/118-229 39946:Oryza sativa Indica
Group
Length = 112
Score = 42.1 bits (21), Expect = 0.001
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 48 attttgggacggagggagtaa 68
|||||||||||||||||||||
Sbjct: 89 attttgggacggagggagtaa 109
>RF00906;MIR1122;AP004047.3/87830-87972 39947:Oryza sativa Japonica
Group
Length = 143
Score = 42.1 bits (21), Expect = 0.001
Identities = 24/25 (96%)
Strand = Plus / Minus
Query: 13 actccctccgtcctaaaatgtaaga 37
||||||||||||||||||| |||||
Sbjct: 138 actccctccgtcctaaaatataaga 114
>RF00906;MIR1122;AP002972.3/107404-107293 39947:Oryza sativa
Japonica Group
Length = 112
Score = 42.1 bits (21), Expect = 0.001
Identities = 21/21 (100%)
Strand = Plus / Minus
Query: 48 attttgggacggagggagtaa 68
|||||||||||||||||||||
Sbjct: 24 attttgggacggagggagtaa 4
>RF00906;MIR1122;AAAA02035863.1/20568-20679 39946:Oryza sativa
Indica Group
Length = 112
Score = 42.1 bits (21), Expect = 0.001
Identities = 24/25 (96%)
Strand = Plus / Plus
Query: 12 tactccctccgtcctaaaatgtaag 36
|||||||||||||||||||| ||||
Sbjct: 5 tactccctccgtcctaaaatataag 29
>RF00906;MIR1122;AAAA02033081.1/3802-3711 39946:Oryza sativa
Indica Group
Length = 92
Score = 42.1 bits (21), Expect = 0.001
Identities = 24/25 (96%)
Strand = Plus / Minus
Query: 43 tttacattttgggacggagggagta 67
|||| ||||||||||||||||||||
Sbjct: 29 tttatattttgggacggagggagta 5
>RF00906;MIR1122;AP002901.2/60176-60097 39947:Oryza sativa
Japonica Group
Length = 80
Score = 42.1 bits (21), Expect = 0.001
Identities = 24/25 (96%)
Strand = Plus / Plus
Query: 12 tactccctccgtcctaaaatgtaag 36
|||||||||||||||||||| ||||
Sbjct: 5 tactccctccgtcctaaaatataag 29
>RF00906;MIR1122;AC210489.1/47612-47477 4538:Oryza glaberrima
(African rice)
Length = 136
Score = 42.1 bits (21), Expect = 0.001
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 48 attttgggacggagggagtaa 68
|||||||||||||||||||||
Sbjct: 113 attttgggacggagggagtaa 133
>RF00906;MIR1122;AC105363.2/93214-93105 39947:Oryza sativa
Japonica Group
Length = 110
Score = 42.1 bits (21), Expect = 0.001
Identities = 24/25 (96%)
Strand = Plus / Plus
Query: 12 tactccctccgtcctaaaatgtaag 36
|||||||||||||||||||| ||||
Sbjct: 5 tactccctccgtcctaaaatataag 29
>RF00906;MIR1122;AAAA02003301.1/35949-35819 39946:Oryza sativa
Indica Group
Length = 131
Score = 42.1 bits (21), Expect = 0.001
Identities = 27/29 (93%)
Strand = Plus / Minus
Query: 9 tactactccctccgtcctaaaatgtaaga 37
||||||||||||||||| ||||| |||||
Sbjct: 130 tactactccctccgtcccaaaatataaga 102
>RF00906;MIR1122;AACV01016108.1/6300-6411 39947:Oryza sativa
Japonica Group
Length = 112
Score = 42.1 bits (21), Expect = 0.001
Identities = 24/25 (96%)
Strand = Plus / Plus
Query: 12 tactccctccgtcctaaaatgtaag 36
||||||||||||||||||| |||||
Sbjct: 5 tactccctccgtcctaaaaagtaag 29
>RF00906;MIR1122;AC087553.3/95101-95202 39947:Oryza sativa
Japonica Group
Length = 102
Score = 42.1 bits (21), Expect = 0.001
Identities = 24/25 (96%)
Strand = Plus / Plus
Query: 12 tactccctccgtcctaaaatgtaag 36
||||||||| |||||||||||||||
Sbjct: 5 tactccctctgtcctaaaatgtaag 29
>RF00906;MIR1122;AACV01011125.1/13959-13873 39947:Oryza sativa
Japonica Group
Length = 87
Score = 42.1 bits (21), Expect = 0.001
Identities = 21/21 (100%)
Strand = Plus / Minus
Query: 48 attttgggacggagggagtaa 68
|||||||||||||||||||||
Sbjct: 24 attttgggacggagggagtaa 4
>RF00906;MIR1122;AC217198.1/19286-19151 4537:Oryza punctata
Length = 136
Score = 42.1 bits (21), Expect = 0.001
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 48 attttgggacggagggagtaa 68
|||||||||||||||||||||
Sbjct: 113 attttgggacggagggagtaa 133
>RF00906;MIR1122;AP002744.2/5581-5711 39947:Oryza sativa Japonica
Group
Length = 131
Score = 42.1 bits (21), Expect = 0.001
Identities = 27/29 (93%)
Strand = Plus / Minus
Query: 9 tactactccctccgtcctaaaatgtaaga 37
||||||||||||||||| ||||| |||||
Sbjct: 130 tactactccctccgtcccaaaatataaga 102
>RF00906;MIR1122;AAAA02004166.1/9974-9858 39946:Oryza sativa
Indica Group
Length = 117
Score = 42.1 bits (21), Expect = 0.001
Identities = 27/29 (93%)
Strand = Plus / Plus
Query: 9 tactactccctccgtcctaaaatgtaaga 37
||||||||||||||||| ||||| |||||
Sbjct: 2 tactactccctccgtcccaaaatataaga 30
>RF00906;MIR1122;AACV01001688.1/277-406 39947:Oryza sativa
Japonica Group
Length = 130
Score = 42.1 bits (21), Expect = 0.001
Identities = 27/29 (93%)
Strand = Plus / Plus
Query: 8 atactactccctccgtcctaaaatgtaag 36
|||||||||||||||||||| ||| ||||
Sbjct: 1 atactactccctccgtcctataatataag 29
>RF00906;MIR1122;AC137999.2/12932-12822 39947:Oryza sativa
Japonica Group
Length = 111
Score = 42.1 bits (21), Expect = 0.001
Identities = 24/25 (96%)
Strand = Plus / Minus
Query: 43 tttacattttgggacggagggagta 67
|||| ||||||||||||||||||||
Sbjct: 29 tttatattttgggacggagggagta 5
>RF00906;MIR1122;AAAA02013097.1/8926-9081 39946:Oryza sativa
Indica Group
Length = 156
Score = 42.1 bits (21), Expect = 0.001
Identities = 21/21 (100%)
Strand = Plus / Minus
Query: 48 attttgggacggagggagtaa 68
|||||||||||||||||||||
Sbjct: 24 attttgggacggagggagtaa 4
>RF00906;MIR1122;AK288546.1/1340-1246 39947:Oryza sativa Japonica
Group
Length = 95
Score = 42.1 bits (21), Expect = 0.001
Identities = 24/25 (96%)
Strand = Plus / Plus
Query: 43 tttacattttgggacggagggagta 67
|||| ||||||||||||||||||||
Sbjct: 67 tttatattttgggacggagggagta 91
>RF00906;MIR1122;AAAA02009296.1/3612-3735 39946:Oryza sativa Indica
Group
Length = 124
Score = 42.1 bits (21), Expect = 0.001
Identities = 27/29 (93%)
Strand = Plus / Minus
Query: 9 tactactccctccgtcctaaaatgtaaga 37
||||||||||||||||| ||||| |||||
Sbjct: 123 tactactccctccgtcccaaaatataaga 95
>RF00906;MIR1122;AACV01009020.1/3379-3256 39947:Oryza sativa
Japonica Group
Length = 124
Score = 42.1 bits (21), Expect = 0.001
Identities = 24/25 (96%)
Strand = Plus / Minus
Query: 12 tactccctccgtcctaaaatgtaag 36
|||||||||||||||||||| ||||
Sbjct: 120 tactccctccgtcctaaaatataag 96
>RF00906;MIR1122;AC229754.2/94242-94126 63629:Oryza minuta
Length = 117
Score = 42.1 bits (21), Expect = 0.001
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 48 attttgggacggagggagtaa 68
|||||||||||||||||||||
Sbjct: 94 attttgggacggagggagtaa 114
>RF00906;MIR1122;AL731876.3/54416-54305 4530:Oryza sativa (rice)
Length = 112
Score = 42.1 bits (21), Expect = 0.001
Identities = 24/25 (96%)
Strand = Plus / Plus
Query: 12 tactccctccgtcctaaaatgtaag 36
||||||||| |||||||||||||||
Sbjct: 5 tactccctctgtcctaaaatgtaag 29
>RF00906;MIR1122;AP008215.1/19940245-19940356 39947:Oryza sativa
Japonica Group
Length = 112
Score = 42.1 bits (21), Expect = 0.001
Identities = 24/25 (96%)
Strand = Plus / Plus
Query: 43 tttacattttgggacggagggagta 67
|||| ||||||||||||||||||||
Sbjct: 84 tttatattttgggacggagggagta 108
>RF00906;MIR1122;AP008209.1/554501-554366 39947:Oryza sativa
Japonica Group
Length = 136
Score = 42.1 bits (21), Expect = 0.001
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 48 attttgggacggagggagtaa 68
|||||||||||||||||||||
Sbjct: 113 attttgggacggagggagtaa 133
>RF00906;MIR1122;AP008213.1/15559796-15559689 39947:Oryza sativa
Japonica Group
Length = 108
Score = 42.1 bits (21), Expect = 0.001
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 48 attttgggacggagggagtaa 68
|||||||||||||||||||||
Sbjct: 85 attttgggacggagggagtaa 105
>RF00906;MIR1122;AC093492.3/33191-33068 39947:Oryza sativa Japonica
Group
Length = 124
Score = 42.1 bits (21), Expect = 0.001
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 48 attttgggacggagggagtaa 68
|||||||||||||||||||||
Sbjct: 101 attttgggacggagggagtaa 121
>RF00906;MIR1122;AAAA02004209.1/3478-3367 39946:Oryza sativa
Indica Group
Length = 112
Score = 42.1 bits (21), Expect = 0.001
Identities = 21/21 (100%)
Strand = Plus / Minus
Query: 48 attttgggacggagggagtaa 68
|||||||||||||||||||||
Sbjct: 24 attttgggacggagggagtaa 4
>RF00906;MIR1122;AAAA02005722.1/24068-24224 39946:Oryza sativa
Indica Group
Length = 157
Score = 42.1 bits (21), Expect = 0.001
Identities = 27/29 (93%)
Strand = Plus / Plus
Query: 39 gttttttacattttgggacggagggagta 67
|||| ||| ||||||||||||||||||||
Sbjct: 125 gtttcttatattttgggacggagggagta 153
Score = 42.1 bits (21), Expect = 0.001
Identities = 27/29 (93%)
Strand = Plus / Minus
Query: 9 tactactccctccgtcctaaaatgtaaga 37
||||||||||||||||| ||||| |||||
Sbjct: 156 tactactccctccgtcccaaaatataaga 128
>RF00906;MIR1122;AL731597.3/103356-103467 39947:Oryza sativa
Japonica Group
Length = 112
Score = 42.1 bits (21), Expect = 0.001
Identities = 27/29 (93%)
Strand = Plus / Minus
Query: 8 atactactccctccgtcctaaaatgtaag 36
|||||||||||||||||| ||||| ||||
Sbjct: 112 atactactccctccgtcccaaaatataag 84
