miRNEST 2.0, an integrative microRNA resource :: BLAST
BLASTN 2.2.20 [Feb-08-2009]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
>RF00906;MIR1122;CT009735.1/55205-55297 4565:Triticum aestivum
(bread wheat)
Length = 93
Score = 58.0 bits (29), Expect = 3e-08
Identities = 32/33 (96%)
Strand = Plus / Minus
Query: 23 tactctctccgtcccataatataagagcgtttt 55
||||| |||||||||||||||||||||||||||
Sbjct: 89 tactccctccgtcccataatataagagcgtttt 57
Score = 54.0 bits (27), Expect = 4e-07
Identities = 27/27 (100%)
Strand = Plus / Plus
Query: 29 ctccgtcccataatataagagcgtttt 55
|||||||||||||||||||||||||||
Sbjct: 11 ctccgtcccataatataagagcgtttt 37
>RF00906;MIR1122;AJ234502.1/104-174 4513:Hordeum vulgare
Length = 71
Score = 58.0 bits (29), Expect = 3e-08
Identities = 32/33 (96%)
Strand = Plus / Minus
Query: 23 tactctctccgtcccataatataagagcgtttt 55
||||| |||||||||||||||||||||||||||
Sbjct: 67 tactccctccgtcccataatataagagcgtttt 35
>RF00906;MIR1122;FJ374604.1/80-162 4573:Aegilops speltoides
Length = 83
Score = 58.0 bits (29), Expect = 3e-08
Identities = 32/33 (96%)
Strand = Plus / Plus
Query: 23 tactctctccgtcccataatataagagcgtttt 55
||||| |||||||||||||||||||||||||||
Sbjct: 5 tactccctccgtcccataatataagagcgtttt 37
Score = 50.1 bits (25), Expect = 7e-06
Identities = 25/25 (100%)
Strand = Plus / Minus
Query: 29 ctccgtcccataatataagagcgtt 53
|||||||||||||||||||||||||
Sbjct: 73 ctccgtcccataatataagagcgtt 49
>RF01058;MIR806;AP008214.1/15639424-15639183 39947:Oryza sativa
Japonica Group
Length = 242
Score = 52.0 bits (26), Expect = 2e-06
Identities = 26/26 (100%)
Strand = Plus / Plus
Query: 22 atactctctccgtcccataatataag 47
||||||||||||||||||||||||||
Sbjct: 1 atactctctccgtcccataatataag 26
>RF01058;MIR806;AACV01013185.1/13859-13616 39947:Oryza sativa
Japonica Group
Length = 244
Score = 52.0 bits (26), Expect = 2e-06
Identities = 26/26 (100%)
Strand = Plus / Plus
Query: 22 atactctctccgtcccataatataag 47
||||||||||||||||||||||||||
Sbjct: 1 atactctctccgtcccataatataag 26
>RF00906;MIR1122;EU626553.1/26077-25985 4572:Triticum urartu
Length = 93
Score = 52.0 bits (26), Expect = 2e-06
Identities = 32/34 (94%)
Strand = Plus / Minus
Query: 21 gatactctctccgtcccataatataagagcgttt 54
||||||| |||||||||||||||||||| |||||
Sbjct: 91 gatactccctccgtcccataatataagaacgttt 58
Score = 44.1 bits (22), Expect = 4e-04
Identities = 31/34 (91%)
Strand = Plus / Plus
Query: 22 atactctctccgtcccataatataagagcgtttt 55
|||||| ||| |||||||||||||||| ||||||
Sbjct: 4 atactccctctgtcccataatataagaacgtttt 37
>RF00906;MIR1122;AACV01024996.1/33659-33776 39947:Oryza sativa
Japonica Group
Length = 118
Score = 52.0 bits (26), Expect = 2e-06
Identities = 26/26 (100%)
Strand = Plus / Plus
Query: 23 tactctctccgtcccataatataaga 48
||||||||||||||||||||||||||
Sbjct: 5 tactctctccgtcccataatataaga 30
>RF00906;MIR1122;AY013246.1/69877-69969 112509:Hordeum vulgare
subsp. vulgare (domesticated barley)
Length = 93
Score = 50.1 bits (25), Expect = 7e-06
Identities = 31/33 (93%)
Strand = Plus / Minus
Query: 23 tactctctccgtcccataatataagagcgtttt 55
||||| |||||||||||||||||||||| ||||
Sbjct: 89 tactccctccgtcccataatataagagcatttt 57
>RF00906;MIR1122;AK251244.1/665-573 112509:Hordeum vulgare subsp.
vulgare (domesticated barley)
Length = 93
Score = 50.1 bits (25), Expect = 7e-06
Identities = 31/33 (93%)
Strand = Plus / Minus
Query: 23 tactctctccgtcccataatataagagcgtttt 55
||||| ||| |||||||||||||||||||||||
Sbjct: 89 tactccctctgtcccataatataagagcgtttt 57
>RF00906;MIR1122;AK248893.1/1282-1190 112509:Hordeum vulgare
subsp. vulgare (domesticated barley)
Length = 93
Score = 50.1 bits (25), Expect = 7e-06
Identities = 31/33 (93%)
Strand = Plus / Plus
Query: 23 tactctctccgtcccataatataagagcgtttt 55
||||| |||||| ||||||||||||||||||||
Sbjct: 5 tactccctccgttccataatataagagcgtttt 37
>RF00906;MIR1122;CT009625.1/19364-19456 37682:Aegilops tauschii
Length = 93
Score = 50.1 bits (25), Expect = 7e-06
Identities = 31/33 (93%)
Strand = Plus / Minus
Query: 23 tactctctccgtcccataatataagagcgtttt 55
||||| |||||||||||||||||||| ||||||
Sbjct: 89 tactccctccgtcccataatataagaacgtttt 57
>RF00906;MIR1122;AF343492.1/1298-1206 58531:Aegilops speltoides
subsp. speltoides
Length = 93
Score = 50.1 bits (25), Expect = 7e-06
Identities = 31/33 (93%)
Strand = Plus / Minus
Query: 23 tactctctccgtcccataatataagagcgtttt 55
||||| |||||||||||||||||| ||||||||
Sbjct: 89 tactccctccgtcccataatataaaagcgtttt 57
Score = 46.1 bits (23), Expect = 1e-04
Identities = 26/27 (96%)
Strand = Plus / Plus
Query: 29 ctccgtcccataatataagagcgtttt 55
|||||||||||||||||||| ||||||
Sbjct: 11 ctccgtcccataatataagaacgtttt 37
>RF00906;MIR1122;AP008208.1/30008764-30008885 39947:Oryza sativa
Japonica Group
Length = 122
Score = 50.1 bits (25), Expect = 7e-06
Identities = 28/29 (96%)
Strand = Plus / Plus
Query: 20 tgatactctctccgtcccataatataaga 48
|||||||||| ||||||||||||||||||
Sbjct: 2 tgatactctcaccgtcccataatataaga 30
Score = 44.1 bits (22), Expect = 4e-04
Identities = 25/26 (96%)
Strand = Plus / Minus
Query: 23 tactctctccgtcccataatataaga 48
||||| ||||||||||||||||||||
Sbjct: 118 tactccctccgtcccataatataaga 93
>RF00906;MIR1122;AAAA02020328.1/21348-21502 39946:Oryza sativa
Indica Group
Length = 155
Score = 50.1 bits (25), Expect = 7e-06
Identities = 25/25 (100%)
Strand = Plus / Plus
Query: 22 atactctctccgtcccataatataa 46
|||||||||||||||||||||||||
Sbjct: 4 atactctctccgtcccataatataa 28
>RF00906;MIR1122;AP008211.1/22476267-22476112 39947:Oryza sativa
Japonica Group
Length = 156
Score = 50.1 bits (25), Expect = 7e-06
Identities = 25/25 (100%)
Strand = Plus / Plus
Query: 22 atactctctccgtcccataatataa 46
|||||||||||||||||||||||||
Sbjct: 4 atactctctccgtcccataatataa 28
>RF00906;MIR1122;AACV01015661.1/3431-3301 39947:Oryza sativa
Japonica Group
Length = 131
Score = 50.1 bits (25), Expect = 7e-06
Identities = 28/29 (96%)
Strand = Plus / Plus
Query: 20 tgatactctctccgtcccataatataaga 48
|||||||| ||||||||||||||||||||
Sbjct: 2 tgatactccctccgtcccataatataaga 30
>RF01058;MIR806;AP008209.1/25433439-25433201 39947:Oryza sativa
Japonica Group
Length = 239
Score = 48.1 bits (24), Expect = 3e-05
Identities = 27/28 (96%)
Strand = Plus / Minus
Query: 22 atactctctccgtcccataatataagag 49
|||||| |||||||||||||||||||||
Sbjct: 239 atactccctccgtcccataatataagag 212
Score = 44.1 bits (22), Expect = 4e-04
Identities = 25/26 (96%)
Strand = Plus / Plus
Query: 22 atactctctccgtcccataatataag 47
|||||| |||||||||||||||||||
Sbjct: 1 atactccctccgtcccataatataag 26
>RF01058;MIR806;AAAA02025608.1/3618-3384 39946:Oryza sativa Indica
Group
Length = 235
Score = 48.1 bits (24), Expect = 3e-05
Identities = 27/28 (96%)
Strand = Plus / Plus
Query: 22 atactctctccgtcccataatataagag 49
|||||| |||||||||||||||||||||
Sbjct: 1 atactccctccgtcccataatataagag 28
>RF01058;MIR806;AACV01007529.1/6632-6394 39947:Oryza sativa
Japonica Group
Length = 239
Score = 48.1 bits (24), Expect = 3e-05
Identities = 27/28 (96%)
Strand = Plus / Plus
Query: 22 atactctctccgtcccataatataagag 49
|||||| |||||||||||||||||||||
Sbjct: 1 atactccctccgtcccataatataagag 28
Score = 44.1 bits (22), Expect = 4e-04
Identities = 25/26 (96%)
Strand = Plus / Minus
Query: 22 atactctctccgtcccataatataag 47
|||||| |||||||||||||||||||
Sbjct: 239 atactccctccgtcccataatataag 214
>RF00906;MIR1122;EF067844.1/469859-469776 112509:Hordeum vulgare
subsp. vulgare (domesticated barley)
Length = 84
Score = 48.1 bits (24), Expect = 3e-05
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 29 ctccgtcccataatataagagcgt 52
||||||||||||||||||||||||
Sbjct: 11 ctccgtcccataatataagagcgt 34
>RF00906;MIR1122;AACV01005493.1/30553-30709 39947:Oryza sativa
Japonica Group
Length = 157
Score = 48.1 bits (24), Expect = 3e-05
Identities = 27/28 (96%)
Strand = Plus / Minus
Query: 19 ctgatactctctccgtcccataatataa 46
||||||||| ||||||||||||||||||
Sbjct: 157 ctgatactccctccgtcccataatataa 130
>RF00906;MIR1122;AAAA02007473.1/30171-30327 39946:Oryza sativa
Indica Group
Length = 157
Score = 48.1 bits (24), Expect = 3e-05
Identities = 27/28 (96%)
Strand = Plus / Minus
Query: 19 ctgatactctctccgtcccataatataa 46
||||||||| ||||||||||||||||||
Sbjct: 157 ctgatactccctccgtcccataatataa 130
>RF00906;MIR1122;ABRL01001744.1/6692-6848 65489:Oryza barthii
Length = 157
Score = 48.1 bits (24), Expect = 3e-05
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 24 actctctccgtcccataatataag 47
||||||||||||||||||||||||
Sbjct: 6 actctctccgtcccataatataag 29
>RF00906;MIR1122;AP003948.2/13023-12867 39947:Oryza sativa Japonica
Group
Length = 157
Score = 48.1 bits (24), Expect = 3e-05
Identities = 27/28 (96%)
Strand = Plus / Minus
Query: 22 atactctctccgtcccataatataagag 49
|||||| |||||||||||||||||||||
Sbjct: 154 atactccctccgtcccataatataagag 127
>RF00906;MIR1122;AP008216.1/3083672-3083805 39947:Oryza sativa
Japonica Group
Length = 134
Score = 48.1 bits (24), Expect = 3e-05
Identities = 27/28 (96%)
Strand = Plus / Plus
Query: 22 atactctctccgtcccataatataagag 49
|||||||||| |||||||||||||||||
Sbjct: 4 atactctctctgtcccataatataagag 31
>RF00906;MIR1122;AP008208.1/30605453-30605313 39947:Oryza sativa
Japonica Group
Length = 141
Score = 48.1 bits (24), Expect = 3e-05
Identities = 27/28 (96%)
Strand = Plus / Plus
Query: 22 atactctctccgtcccataatataagag 49
|||||| |||||||||||||||||||||
Sbjct: 4 atactccctccgtcccataatataagag 31
>RF01058;MIR806;AAAA02011284.1/63255-63498 39946:Oryza sativa Indica
Group
Length = 244
Score = 46.1 bits (23), Expect = 1e-04
Identities = 26/27 (96%)
Strand = Plus / Minus
Query: 23 tactctctccgtcccataatataagag 49
||||| |||||||||||||||||||||
Sbjct: 243 tactccctccgtcccataatataagag 217
>RF00906;MIR1122;X13927.3/11614-11525 4565:Triticum aestivum
(bread wheat)
Length = 90
Score = 46.1 bits (23), Expect = 1e-04
Identities = 26/27 (96%)
Strand = Plus / Plus
Query: 29 ctccgtcccataatataagagcgtttt 55
|||||| ||||||||||||||||||||
Sbjct: 10 ctccgttccataatataagagcgtttt 36
>RF00906;MIR1122;X80068.1/1038-939 4513:Hordeum vulgare
Length = 100
Score = 46.1 bits (23), Expect = 1e-04
Identities = 26/27 (96%)
Strand = Plus / Plus
Query: 22 atactctctccgtcccataatataaga 48
|||||| ||||||||||||||||||||
Sbjct: 4 atactccctccgtcccataatataaga 30
>RF00906;MIR1122;EU200767.1/2385-2293 37682:Aegilops tauschii
Length = 93
Score = 46.1 bits (23), Expect = 1e-04
Identities = 26/27 (96%)
Strand = Plus / Minus
Query: 22 atactctctccgtcccataatataaga 48
|||||| ||||||||||||||||||||
Sbjct: 90 atactccctccgtcccataatataaga 64
>RF00906;MIR1122;AAAA02016804.1/14776-14638 39946:Oryza sativa
Indica Group
Length = 139
Score = 46.1 bits (23), Expect = 1e-04
Identities = 26/27 (96%)
Strand = Plus / Minus
Query: 23 tactctctccgtcccataatataagag 49
||||| |||||||||||||||||||||
Sbjct: 135 tactccctccgtcccataatataagag 109
Score = 44.1 bits (22), Expect = 4e-04
Identities = 25/26 (96%)
Strand = Plus / Plus
Query: 22 atactctctccgtcccataatataag 47
|||||||||| |||||||||||||||
Sbjct: 4 atactctctctgtcccataatataag 29
>RF00906;MIR1122;AL442105.2/58754-58619 4530:Oryza sativa (rice)
Length = 136
Score = 46.1 bits (23), Expect = 1e-04
Identities = 26/27 (96%)
Strand = Plus / Plus
Query: 23 tactctctccgtcccataatataagag 49
||||||||||||||| |||||||||||
Sbjct: 5 tactctctccgtcccgtaatataagag 31
>RF00906;MIR1122;AAAA02027487.1/4806-4726 39946:Oryza sativa
Indica Group
Length = 81
Score = 46.1 bits (23), Expect = 1e-04
Identities = 26/27 (96%)
Strand = Plus / Minus
Query: 22 atactctctccgtcccataatataaga 48
|||||| ||||||||||||||||||||
Sbjct: 78 atactccctccgtcccataatataaga 52
Score = 44.1 bits (22), Expect = 4e-04
Identities = 25/26 (96%)
Strand = Plus / Plus
Query: 23 tactctctccgtcccataatataaga 48
||||| ||||||||||||||||||||
Sbjct: 5 tactccctccgtcccataatataaga 30
>RF00906;MIR1122;AAAA02018486.1/27307-27424 39946:Oryza sativa
Indica Group
Length = 118
Score = 46.1 bits (23), Expect = 1e-04
Identities = 26/27 (96%)
Strand = Plus / Minus
Query: 23 tactctctccgtcccataatataagag 49
||||| |||||||||||||||||||||
Sbjct: 114 tactccctccgtcccataatataagag 88
>RF00906;MIR1122;AACV01020013.1/4046-4126 39947:Oryza sativa
Japonica Group
Length = 81
Score = 46.1 bits (23), Expect = 1e-04
Identities = 26/27 (96%)
Strand = Plus / Plus
Query: 22 atactctctccgtcccataatataaga 48
|||||| ||||||||||||||||||||
Sbjct: 4 atactccctccgtcccataatataaga 30
Score = 44.1 bits (22), Expect = 4e-04
Identities = 25/26 (96%)
Strand = Plus / Minus
Query: 23 tactctctccgtcccataatataaga 48
||||| ||||||||||||||||||||
Sbjct: 77 tactccctccgtcccataatataaga 52
>RF00906;MIR1122;AL512542.2/7629-7514 4530:Oryza sativa (rice)
Length = 116
Score = 46.1 bits (23), Expect = 1e-04
Identities = 26/27 (96%)
Strand = Plus / Plus
Query: 21 gatactctctccgtcccataatataag 47
||||||| |||||||||||||||||||
Sbjct: 3 gatactccctccgtcccataatataag 29
>RF00906;MIR1122;AAAA02005800.1/23183-23322 39946:Oryza sativa
Indica Group
Length = 140
Score = 46.1 bits (23), Expect = 1e-04
Identities = 26/27 (96%)
Strand = Plus / Plus
Query: 20 tgatactctctccgtcccataatataa 46
|||||||| ||||||||||||||||||
Sbjct: 2 tgatactccctccgtcccataatataa 28
>RF00906;MIR1122;AP004885.3/67265-67119 39947:Oryza sativa Japonica
Group
Length = 147
Score = 46.1 bits (23), Expect = 1e-04
Identities = 26/27 (96%)
Strand = Plus / Minus
Query: 22 atactctctccgtcccataatataaga 48
|||||| ||||||||||||||||||||
Sbjct: 144 atactccctccgtcccataatataaga 118
>RF00906;MIR1122;AC135427.3/71840-71709 39947:Oryza sativa
Japonica Group
Length = 132
Score = 46.1 bits (23), Expect = 1e-04
Identities = 26/27 (96%)
Strand = Plus / Plus
Query: 23 tactctctccgtcccataatataagag 49
|||||||||||||||| ||||||||||
Sbjct: 5 tactctctccgtcccaaaatataagag 31
>RF00906;MIR1122;AP004229.3/81940-82079 39947:Oryza sativa Japonica
Group
Length = 140
Score = 46.1 bits (23), Expect = 1e-04
Identities = 26/27 (96%)
Strand = Plus / Minus
Query: 23 tactctctccgtcccataatataagag 49
||||| |||||||||||||||||||||
Sbjct: 136 tactccctccgtcccataatataagag 110
>RF00906;MIR1122;AC136219.2/91733-91617 39947:Oryza sativa
Japonica Group
Length = 117
Score = 46.1 bits (23), Expect = 1e-04
Identities = 26/27 (96%)
Strand = Plus / Plus
Query: 22 atactctctccgtcccataatataaga 48
||||||||||||||||| |||||||||
Sbjct: 4 atactctctccgtcccaaaatataaga 30
>RF00906;MIR1122;AP008215.1/17611882-17611726 39947:Oryza sativa
Japonica Group
Length = 157
Score = 46.1 bits (23), Expect = 1e-04
Identities = 26/27 (96%)
Strand = Plus / Minus
Query: 23 tactctctccgtcccataatataagag 49
||||| |||||||||||||||||||||
Sbjct: 153 tactccctccgtcccataatataagag 127
>RF00906;MIR1122;AL606691.4/149690-149555 39947:Oryza sativa
Japonica Group
Length = 136
Score = 46.1 bits (23), Expect = 1e-04
Identities = 26/27 (96%)
Strand = Plus / Plus
Query: 23 tactctctccgtcccataatataagag 49
||||||||||||||| |||||||||||
Sbjct: 5 tactctctccgtcccgtaatataagag 31
>RF00906;MIR1122;AC134348.2/54043-54161 39947:Oryza sativa Japonica
Group
Length = 119
Score = 46.1 bits (23), Expect = 1e-04
Identities = 26/27 (96%)
Strand = Plus / Minus
Query: 23 tactctctccgtcccataatataagag 49
||||| |||||||||||||||||||||
Sbjct: 115 tactccctccgtcccataatataagag 89
Score = 44.1 bits (22), Expect = 4e-04
Identities = 25/26 (96%)
Strand = Plus / Plus
Query: 22 atactctctccgtcccataatataag 47
|||||||||| |||||||||||||||
Sbjct: 4 atactctctctgtcccataatataag 29
>RF00906;MIR1122;AAAA02017713.1/95926-95807 39946:Oryza sativa
Indica Group
Length = 120
Score = 46.1 bits (23), Expect = 1e-04
Identities = 26/27 (96%)
Strand = Plus / Plus
Query: 20 tgatactctctccgtcccataatataa 46
|||||||| ||||||||||||||||||
Sbjct: 2 tgatactccctccgtcccataatataa 28
>RF01058;MIR806;AAAA02003871.1/18652-18886 39946:Oryza sativa Indica
Group
Length = 235
Score = 44.1 bits (22), Expect = 4e-04
Identities = 25/26 (96%)
Strand = Plus / Minus
Query: 22 atactctctccgtcccataatataag 47
|||||| |||||||||||||||||||
Sbjct: 235 atactccctccgtcccataatataag 210
>RF01058;MIR806;AACV01007669.1/15429-15672 39947:Oryza sativa
Japonica Group
Length = 244
Score = 44.1 bits (22), Expect = 4e-04
Identities = 25/26 (96%)
Strand = Plus / Plus
Query: 22 atactctctccgtcccataatataag 47
|||||| |||||||||||||||||||
Sbjct: 1 atactccctccgtcccataatataag 26
>RF01058;MIR806;AP008212.1/22380588-22380348 39947:Oryza sativa
Japonica Group
Length = 241
Score = 44.1 bits (22), Expect = 4e-04
Identities = 25/26 (96%)
Strand = Plus / Plus
Query: 22 atactctctccgtcccataatataag 47
|||||| |||||||||||||||||||
Sbjct: 1 atactccctccgtcccataatataag 26
>RF01058;MIR806;AP008212.1/23750957-23751199 39947:Oryza sativa
Japonica Group
Length = 243
Score = 44.1 bits (22), Expect = 4e-04
Identities = 25/26 (96%)
Strand = Plus / Minus
Query: 22 atactctctccgtcccataatataag 47
|||||| |||||||||||||||||||
Sbjct: 243 atactccctccgtcccataatataag 218
>RF01058;MIR806;AAAA02031014.1/26426-26184 39946:Oryza sativa
Indica Group
Length = 243
Score = 44.1 bits (22), Expect = 4e-04
Identities = 25/26 (96%)
Strand = Plus / Plus
Query: 22 atactctctccgtcccataatataag 47
|||||| |||||||||||||||||||
Sbjct: 1 atactccctccgtcccataatataag 26
Score = 44.1 bits (22), Expect = 4e-04
Identities = 25/26 (96%)
Strand = Plus / Minus
Query: 22 atactctctccgtcccataatataag 47
|||||| |||||||||||||||||||
Sbjct: 243 atactccctccgtcccataatataag 218
>RF01058;MIR806;AAAA02030701.1/27339-27098 39946:Oryza sativa
Indica Group
Length = 242
Score = 44.1 bits (22), Expect = 4e-04
Identities = 25/26 (96%)
Strand = Plus / Plus
Query: 22 atactctctccgtcccataatataag 47
|||||| |||||||||||||||||||
Sbjct: 1 atactccctccgtcccataatataag 26
>RF01058;MIR806;AAAA02000839.1/35471-35708 39946:Oryza sativa
Indica Group
Length = 238
Score = 44.1 bits (22), Expect = 4e-04
Identities = 25/26 (96%)
Strand = Plus / Plus
Query: 22 atactctctccgtcccataatataag 47
|||||| |||||||||||||||||||
Sbjct: 1 atactccctccgtcccataatataag 26
>RF01058;MIR806;AC145127.1/405367-405608 39947:Oryza sativa
Japonica Group
Length = 242
Score = 44.1 bits (22), Expect = 4e-04
Identities = 25/26 (96%)
Strand = Plus / Plus
Query: 22 atactctctccgtcccataatataag 47
|||||| |||||||||||||||||||
Sbjct: 1 atactccctccgtcccataatataag 26
>RF01058;MIR806;AP004797.3/60701-60942 39947:Oryza sativa Japonica
Group
Length = 242
Score = 44.1 bits (22), Expect = 4e-04
Identities = 25/26 (96%)
Strand = Plus / Plus
Query: 22 atactctctccgtcccataatataag 47
|||||| |||||||||||||||||||
Sbjct: 1 atactccctccgtcccataatataag 26
Score = 44.1 bits (22), Expect = 4e-04
Identities = 25/26 (96%)
Strand = Plus / Minus
Query: 22 atactctctccgtcccataatataag 47
|||||| |||||||||||||||||||
Sbjct: 242 atactccctccgtcccataatataag 217
>RF01058;MIR806;AAAA02003925.1/62067-62310 39946:Oryza sativa Indica
Group
Length = 244
Score = 44.1 bits (22), Expect = 4e-04
Identities = 25/26 (96%)
Strand = Plus / Minus
Query: 22 atactctctccgtcccataatataag 47
|||||| |||||||||||||||||||
Sbjct: 244 atactccctccgtcccataatataag 219
>RF01058;MIR806;AAAA02007696.1/5047-4813 39946:Oryza sativa Indica
Group
Length = 235
Score = 44.1 bits (22), Expect = 4e-04
Identities = 25/26 (96%)
Strand = Plus / Plus
Query: 22 atactctctccgtcccataatataag 47
|||||| |||||||||||||||||||
Sbjct: 1 atactccctccgtcccataatataag 26
Score = 44.1 bits (22), Expect = 4e-04
Identities = 25/26 (96%)
Strand = Plus / Minus
Query: 22 atactctctccgtcccataatataag 47
|||||| |||||||||||||||||||
Sbjct: 235 atactccctccgtcccataatataag 210
>RF01058;MIR806;AP008214.1/3500621-3500380 39947:Oryza sativa
Japonica Group
Length = 242
Score = 44.1 bits (22), Expect = 4e-04
Identities = 25/26 (96%)
Strand = Plus / Plus
Query: 22 atactctctccgtcccataatataag 47
|||||| |||||||||||||||||||
Sbjct: 1 atactccctccgtcccataatataag 26
Score = 44.1 bits (22), Expect = 4e-04
Identities = 25/26 (96%)
Strand = Plus / Minus
Query: 22 atactctctccgtcccataatataag 47
|||||| |||||||||||||||||||
Sbjct: 242 atactccctccgtcccataatataag 217
>RF01058;MIR806;AC133008.3/78480-78237 39947:Oryza sativa Japonica
Group
Length = 244
Score = 44.1 bits (22), Expect = 4e-04
Identities = 25/26 (96%)
Strand = Plus / Plus
Query: 22 atactctctccgtcccataatataag 47
|||||| |||||||||||||||||||
Sbjct: 1 atactccctccgtcccataatataag 26
>RF00906;MIR1122;EU835198.1/120580-120672 85692:Triticum turgidum
subsp. dicoccoides
Length = 93
Score = 44.1 bits (22), Expect = 4e-04
Identities = 25/26 (96%)
Strand = Plus / Minus
Query: 23 tactctctccgtcccataatataaga 48
||||| ||||||||||||||||||||
Sbjct: 89 tactccctccgtcccataatataaga 64
>RF00906;MIR1122;DQ871219.1/56040-55948 85692:Triticum turgidum
subsp. dicoccoides
Length = 93
Score = 44.1 bits (22), Expect = 4e-04
Identities = 25/26 (96%)
Strand = Plus / Minus
Query: 23 tactctctccgtcccataatataaga 48
||||| ||||||||||||||||||||
Sbjct: 89 tactccctccgtcccataatataaga 64
>RF00906;MIR1122;AM932680.1/104484-104576 4565:Triticum aestivum
(bread wheat)
Length = 93
Score = 44.1 bits (22), Expect = 4e-04
Identities = 31/34 (91%)
Strand = Plus / Minus
Query: 22 atactctctccgtcccataatataagagcgtttt 55
|||||| |||| ||||||||||||||| ||||||
Sbjct: 90 atactccctccttcccataatataagaacgtttt 57
>RF00906;MIR1122;AJ507395.1/8084-8185 112509:Hordeum vulgare
subsp. vulgare (domesticated barley)
Length = 102
Score = 44.1 bits (22), Expect = 4e-04
Identities = 25/26 (96%)
Strand = Plus / Plus
Query: 23 tactctctccgtcccataatataaga 48
||||| ||||||||||||||||||||
Sbjct: 5 tactccctccgtcccataatataaga 30
>RF00906;MIR1122;AAAA02030950.1/26939-26775 39946:Oryza sativa
Indica Group
Length = 165
Score = 44.1 bits (22), Expect = 4e-04
Identities = 25/26 (96%)
Strand = Plus / Minus
Query: 22 atactctctccgtcccataatataag 47
|||||| |||||||||||||||||||
Sbjct: 162 atactccctccgtcccataatataag 137
>RF00906;MIR1122;AAAA02014808.1/30258-30413 39946:Oryza sativa
Indica Group
Length = 156
Score = 44.1 bits (22), Expect = 4e-04
Identities = 22/22 (100%)
Strand = Plus / Minus
Query: 23 tactctctccgtcccataatat 44
||||||||||||||||||||||
Sbjct: 152 tactctctccgtcccataatat 131
>RF00906;MIR1122;AACV01015246.1/27552-27707 39947:Oryza sativa
Japonica Group
Length = 156
Score = 44.1 bits (22), Expect = 4e-04
Identities = 25/26 (96%)
Strand = Plus / Minus
Query: 22 atactctctccgtcccataatataag 47
|||||| |||||||||||||||||||
Sbjct: 153 atactccctccgtcccataatataag 128
>RF00906;MIR1122;AC215729.1/5950-6041 4537:Oryza punctata
Length = 92
Score = 44.1 bits (22), Expect = 4e-04
Identities = 25/26 (96%)
Strand = Plus / Plus
Query: 22 atactctctccgtcccataatataag 47
|||||| |||||||||||||||||||
Sbjct: 4 atactccctccgtcccataatataag 29
>RF00906;MIR1122;AAAA02005900.1/34221-34065 39946:Oryza sativa
Indica Group
Length = 157
Score = 44.1 bits (22), Expect = 4e-04
Identities = 25/26 (96%)
Strand = Plus / Minus
Query: 22 atactctctccgtcccataatataag 47
|||||| |||||||||||||||||||
Sbjct: 154 atactccctccgtcccataatataag 129
>RF00906;MIR1122;AC226807.1/78158-78249 63629:Oryza minuta
Length = 92
Score = 44.1 bits (22), Expect = 4e-04
Identities = 25/26 (96%)
Strand = Plus / Plus
Query: 22 atactctctccgtcccataatataag 47
||||||||| ||||||||||||||||
Sbjct: 4 atactctcttcgtcccataatataag 29
>RF00906;MIR1122;AAAA02021990.1/33218-33084 39946:Oryza sativa
Indica Group
Length = 135
Score = 44.1 bits (22), Expect = 4e-04
Identities = 25/26 (96%)
Strand = Plus / Plus
Query: 22 atactctctccgtcccataatataag 47
|||||| |||||||||||||||||||
Sbjct: 4 atactccctccgtcccataatataag 29
>RF00906;MIR1122;AAAA02007279.1/3361-3494 39946:Oryza sativa Indica
Group
Length = 134
Score = 44.1 bits (22), Expect = 4e-04
Identities = 25/26 (96%)
Strand = Plus / Minus
Query: 23 tactctctccgtcccataatataaga 48
||||| ||||||||||||||||||||
Sbjct: 130 tactccctccgtcccataatataaga 105
>RF00906;MIR1122;AAAA02007751.1/21104-20995 39946:Oryza sativa
Indica Group
Length = 110
Score = 44.1 bits (22), Expect = 4e-04
Identities = 25/26 (96%)
Strand = Plus / Plus
Query: 22 atactctctccgtcccataatataag 47
||||||||||||||||| ||||||||
Sbjct: 4 atactctctccgtcccaaaatataag 29
>RF00906;MIR1122;AAAA02023860.1/3747-3613 39946:Oryza sativa
Indica Group
Length = 135
Score = 44.1 bits (22), Expect = 4e-04
Identities = 25/26 (96%)
Strand = Plus / Plus
Query: 22 atactctctccgtcccataatataag 47
|||||| |||||||||||||||||||
Sbjct: 4 atactccctccgtcccataatataag 29
>RF00906;MIR1122;AP003842.5/108129-107973 39947:Oryza sativa
Japonica Group
Length = 157
Score = 44.1 bits (22), Expect = 4e-04
Identities = 25/26 (96%)
Strand = Plus / Minus
Query: 22 atactctctccgtcccataatataag 47
|||||| |||||||||||||||||||
Sbjct: 154 atactccctccgtcccataatataag 129
>RF00906;MIR1122;AC137993.2/27522-27654 39947:Oryza sativa
Japonica Group
Length = 133
Score = 44.1 bits (22), Expect = 4e-04
Identities = 25/26 (96%)
Strand = Plus / Plus
Query: 22 atactctctccgtcccataatataag 47
|||||| |||||||||||||||||||
Sbjct: 4 atactccctccgtcccataatataag 29
>RF00906;MIR1122;AAAA02017484.1/6201-6342 39946:Oryza sativa Indica
Group
Length = 142
Score = 44.1 bits (22), Expect = 4e-04
Identities = 25/26 (96%)
Strand = Plus / Minus
Query: 22 atactctctccgtcccataatataag 47
|||||| |||||||||||||||||||
Sbjct: 139 atactccctccgtcccataatataag 114
>RF00906;MIR1122;AACV01002428.1/16152-15997 39947:Oryza sativa
Japonica Group
Length = 156
Score = 44.1 bits (22), Expect = 4e-04
Identities = 25/26 (96%)
Strand = Plus / Minus
Query: 20 tgatactctctccgtcccataatata 45
|||||||| |||||||||||||||||
Sbjct: 155 tgatactccctccgtcccataatata 130
>RF00906;MIR1122;AACV01022450.1/23564-23424 39947:Oryza sativa
Japonica Group
Length = 141
Score = 44.1 bits (22), Expect = 4e-04
Identities = 25/26 (96%)
Strand = Plus / Minus
Query: 22 atactctctccgtcccataatataag 47
|||||| |||||||||||||||||||
Sbjct: 138 atactccctccgtcccataatataag 113
>RF00906;MIR1122;AAAA02020252.1/431-548 39946:Oryza sativa Indica
Group
Length = 118
Score = 44.1 bits (22), Expect = 4e-04
Identities = 25/26 (96%)
Strand = Plus / Minus
Query: 22 atactctctccgtcccataatataag 47
|||||| |||||||||||||||||||
Sbjct: 115 atactccctccgtcccataatataag 90
>RF00906;MIR1122;AAAA02023828.1/150-266 39946:Oryza sativa Indica
Group
Length = 117
Score = 44.1 bits (22), Expect = 4e-04
Identities = 25/26 (96%)
Strand = Plus / Minus
Query: 22 atactctctccgtcccataatataag 47
|||||| |||||||||||||||||||
Sbjct: 114 atactccctccgtcccataatataag 89
>RF00906;MIR1122;AL713936.4/62382-62493 4530:Oryza sativa (rice)
Length = 112
Score = 44.1 bits (22), Expect = 4e-04
Identities = 25/26 (96%)
Strand = Plus / Minus
Query: 22 atactctctccgtcccataatataag 47
|||||| |||||||||||||||||||
Sbjct: 109 atactccctccgtcccataatataag 84
>RF00906;MIR1122;AP008217.1/17152537-17152413 39947:Oryza sativa
Japonica Group
Length = 125
Score = 44.1 bits (22), Expect = 4e-04
Identities = 25/26 (96%)
Strand = Plus / Plus
Query: 22 atactctctccgtcccataatataag 47
||||||||||||||||| ||||||||
Sbjct: 4 atactctctccgtcccaaaatataag 29
>RF00906;MIR1122;AC217198.1/129397-129553 4537:Oryza punctata
Length = 157
Score = 44.1 bits (22), Expect = 4e-04
Identities = 25/26 (96%)
Strand = Plus / Plus
Query: 22 atactctctccgtcccataatataag 47
||||||||||||||||| ||||||||
Sbjct: 4 atactctctccgtcccaaaatataag 29
>RF00906;MIR1122;AP004994.2/6845-6714 39947:Oryza sativa Japonica
Group
Length = 132
Score = 44.1 bits (22), Expect = 4e-04
Identities = 25/26 (96%)
Strand = Plus / Minus
Query: 22 atactctctccgtcccataatataag 47
|||||| |||||||||||||||||||
Sbjct: 129 atactccctccgtcccataatataag 104
>RF00906;MIR1122;AAAA02020253.1/35204-35082 39946:Oryza sativa
Indica Group
Length = 123
Score = 44.1 bits (22), Expect = 4e-04
Identities = 25/26 (96%)
Strand = Plus / Minus
Query: 22 atactctctccgtcccataatataag 47
|||||| |||||||||||||||||||
Sbjct: 120 atactccctccgtcccataatataag 95
>RF00906;MIR1122;AC123518.2/65954-65790 39947:Oryza sativa
Japonica Group
Length = 165
Score = 44.1 bits (22), Expect = 4e-04
Identities = 25/26 (96%)
Strand = Plus / Plus
Query: 22 atactctctccgtcccataatataag 47
|||||| |||||||||||||||||||
Sbjct: 4 atactccctccgtcccataatataag 29
>RF00906;MIR1122;AP008215.1/3184216-3184308 39947:Oryza sativa
Japonica Group
Length = 93
Score = 44.1 bits (22), Expect = 4e-04
Identities = 25/26 (96%)
Strand = Plus / Minus
Query: 22 atactctctccgtcccataatataag 47
|||||| |||||||||||||||||||
Sbjct: 90 atactccctccgtcccataatataag 65
>RF00906;MIR1122;AAAA02020362.1/853-722 39946:Oryza sativa Indica
Group
Length = 132
Score = 44.1 bits (22), Expect = 4e-04
Identities = 25/26 (96%)
Strand = Plus / Minus
Query: 22 atactctctccgtcccataatataag 47
|||||| |||||||||||||||||||
Sbjct: 129 atactccctccgtcccataatataag 104
>RF00906;MIR1122;AP008207.1/1012082-1012198 39947:Oryza sativa
Japonica Group
Length = 117
Score = 44.1 bits (22), Expect = 4e-04
Identities = 25/26 (96%)
Strand = Plus / Plus
Query: 23 tactctctccgtcccataatataaga 48
||||| ||||||||||||||||||||
Sbjct: 5 tactccctccgtcccataatataaga 30
Score = 44.1 bits (22), Expect = 4e-04
Identities = 25/26 (96%)
Strand = Plus / Minus
Query: 23 tactctctccgtcccataatataaga 48
||||| ||||||||||||||||||||
Sbjct: 113 tactccctccgtcccataatataaga 88
>RF00906;MIR1122;AAAA02003361.1/12742-12901 39946:Oryza sativa
Indica Group
Length = 160
Score = 44.1 bits (22), Expect = 4e-04
Identities = 25/26 (96%)
Strand = Plus / Plus
Query: 23 tactctctccgtcccataatataaga 48
||||| ||||||||||||||||||||
Sbjct: 5 tactccctccgtcccataatataaga 30
>RF00906;MIR1122;AP008211.1/23389262-23389121 39947:Oryza sativa
Japonica Group
Length = 142
Score = 44.1 bits (22), Expect = 4e-04
Identities = 25/26 (96%)
Strand = Plus / Minus
Query: 22 atactctctccgtcccataatataag 47
|||||| |||||||||||||||||||
Sbjct: 139 atactccctccgtcccataatataag 114
>RF00906;MIR1122;AP004706.3/101051-100895 39947:Oryza sativa
Japonica Group
Length = 157
Score = 44.1 bits (22), Expect = 4e-04
Identities = 25/26 (96%)
Strand = Plus / Minus
Query: 22 atactctctccgtcccataatataag 47
|||||| |||||||||||||||||||
Sbjct: 154 atactccctccgtcccataatataag 129
>RF00906;MIR1122;AP004891.4/64233-64389 39947:Oryza sativa Japonica
Group
Length = 157
Score = 44.1 bits (22), Expect = 4e-04
Identities = 25/26 (96%)
Strand = Plus / Minus
Query: 22 atactctctccgtcccataatataag 47
|||||| |||||||||||||||||||
Sbjct: 154 atactccctccgtcccataatataag 129
