miRNEST 2.0, an integrative microRNA resource :: BLAST
BLASTN 2.2.20 [Feb-08-2009]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
>RF00906;MIR1122;DQ445236.1/13423-13319 112509:Hordeum vulgare
subsp. vulgare (domesticated barley)
Length = 105
Score = 121 bits (61), Expect = 4e-27
Identities = 88/97 (90%)
Strand = Plus / Minus
Query: 47 tactctctccgtcctaaaataactgtctaaagcttaatacaactttgtactagagctagt 106
||||| |||||| | ||||||||| ||| ||||||| |||||||||||||||||||||||
Sbjct: 101 tactccctccgttccaaaataactatctcaagcttagtacaactttgtactagagctagt 42
Query: 107 acaaagttaagacacttattttggaacgaagggagta 143
||||| || ||||||||||||||||||| ||||||||
Sbjct: 41 acaaatttgagacacttattttggaacggagggagta 5
>RF00906;MIR1122;AF474373.1/50497-50394 112509:Hordeum vulgare
subsp. vulgare (domesticated barley)
Length = 104
Score = 111 bits (56), Expect = 4e-24
Identities = 77/84 (91%)
Strand = Plus / Plus
Query: 47 tactctctccgtcctaaaataactgtctaaagcttaatacaactttgtactagagctagt 106
||||| |||||||| ||||||||||||| |||| || ||||||||||||||||| |||||
Sbjct: 5 tactcactccgtcccaaaataactgtctcaagcctagtacaactttgtactagaactagt 64
Query: 107 acaaagttaagacacttattttgg 130
|||||||| |||||||||||||||
Sbjct: 65 acaaagttgagacacttattttgg 88
>RF00906;MIR1122;X83518.1/7301-7197 4513:Hordeum vulgare
Length = 105
Score = 109 bits (55), Expect = 1e-23
Identities = 67/71 (94%)
Strand = Plus / Plus
Query: 62 aaaataactgtctaaagcttaatacaactttgtactagagctagtacaaagttaagacac 121
||||||||||||| ||||||| |||||||||||| |||||||||||||||||| ||||||
Sbjct: 20 aaaataactgtctcaagcttagtacaactttgtagtagagctagtacaaagttgagacac 79
Query: 122 ttattttggaa 132
|||||||||||
Sbjct: 80 ttattttggaa 90
>RF00906;MIR1122;FJ236275.1/674-570 4573:Aegilops speltoides
Length = 105
Score = 109 bits (55), Expect = 1e-23
Identities = 88/99 (88%)
Strand = Plus / Plus
Query: 46 gtactctctccgtcctaaaataactgtctaaagcttaatacaactttgtactagagctag 105
|||||| ||||||| ||||||| ||||| |||| || ||||||||||||||| || |||
Sbjct: 4 gtactccctccgtctcaaaataagtgtctcaagcctagtacaactttgtactaaagttag 63
Query: 106 tacaaagttaagacacttattttggaacgaagggagtac 144
||||||||||||||||||||||||| ||| |||||||||
Sbjct: 64 tacaaagttaagacacttattttgggacggagggagtac 102
>RF00906;MIR1122;AK249560.1/988-1092 112509:Hordeum vulgare subsp.
vulgare (domesticated barley)
Length = 105
Score = 107 bits (54), Expect = 5e-23
Identities = 87/98 (88%)
Strand = Plus / Minus
Query: 46 gtactctctccgtcctaaaataactgtctaaagcttaatacaactttgtactagagctag 105
|||||| |||||||| ||||||||||||| || |||||||||| ||||||||| ||||||
Sbjct: 102 gtactccctccgtcccaaaataactgtctcaaacttaatacaagtttgtactatagctag 43
Query: 106 tacaaagttaagacacttattttggaacgaagggagta 143
|| |||||| ||||||||||||||| ||| | ||||||
Sbjct: 42 tataaagttgagacacttattttgggacggatggagta 5
>RF00906;MIR1122;AJ249141.1/1014-910 4513:Hordeum vulgare
Length = 105
Score = 101 bits (51), Expect = 3e-21
Identities = 78/87 (89%)
Strand = Plus / Plus
Query: 57 gtcctaaaataactgtctaaagcttaatacaactttgtactagagctagtacaaagttaa 116
|||||||||||| ||||| ||||||| ||||||||||||||||||||| ||||||||| |
Sbjct: 15 gtcctaaaataagtgtcttaagcttagtacaactttgtactagagctaatacaaagttga 74
Query: 117 gacacttattttggaacgaagggagta 143
|||| |||||||| ||| ||||||||
Sbjct: 75 gacagttattttgagacggagggagta 101
>RF00906;MIR1122;DQ175992.1/50-154 112509:Hordeum vulgare subsp.
vulgare (domesticated barley)
Length = 105
Score = 97.6 bits (49), Expect = 5e-20
Identities = 85/97 (87%)
Strand = Plus / Plus
Query: 47 tactctctccgtcctaaaataactgtctaaagcttaatacaactttgtactagagctagt 106
|||||||||||| |||||||| ||||| ||||||| || || ||| ||||||||||||
Sbjct: 5 tactctctccgttttaaaataagtgtcttaagcttagtataattttatactagagctaga 64
Query: 107 acaaagttaagacacttattttggaacgaagggagta 143
|||||||||||||| ||||||||| ||| ||||||||
Sbjct: 65 acaaagttaagacaattattttgggacggagggagta 101
>RF00906;MIR1122;EU282755.1/953-849 112509:Hordeum vulgare subsp.
vulgare (domesticated barley)
Length = 105
Score = 97.6 bits (49), Expect = 5e-20
Identities = 85/97 (87%)
Strand = Plus / Plus
Query: 47 tactctctccgtcctaaaataactgtctaaagcttaatacaactttgtactagagctagt 106
||||| |||||||| ||||||| ||||| ||||||| | || ||||||||| |||||||
Sbjct: 5 tactccctccgtcccaaaataagtgtctcaagcttagtgtaattttgtactacagctagt 64
Query: 107 acaaagttaagacacttattttggaacgaagggagta 143
|||||||| ||||||||||||||| ||| ||||||||
Sbjct: 65 acaaagttgagacacttattttgggacggagggagta 101
>RF00906;MIR1122;EU282239.1/1196-1300 52152:Elymus repens
Length = 105
Score = 97.6 bits (49), Expect = 5e-20
Identities = 85/97 (87%)
Strand = Plus / Plus
Query: 47 tactctctccgtcctaaaataactgtctaaagcttaatacaactttgtactagagctagt 106
||||| |||||||| ||||||| ||||| ||||||| ||||||||||||||| || || |
Sbjct: 5 tactccctccgtcccaaaataagtgtctcaagcttagtacaactttgtactaaagttaat 64
Query: 107 acaaagttaagacacttattttggaacgaagggagta 143
|||||||| ||||| ||||||||| ||| ||||||||
Sbjct: 65 acaaagttgagacatttattttgggacggagggagta 101
>RF00906;MIR1122;DQ871219.1/106890-106994 85692:Triticum turgidum
subsp. dicoccoides
Length = 105
Score = 95.6 bits (48), Expect = 2e-19
Identities = 87/100 (87%)
Strand = Plus / Plus
Query: 47 tactctctccgtcctaaaataactgtctaaagcttaatacaactttgtactagagctagt 106
||||| |||||||| ||||||| ||||| |||||| || || |||||||||||| ||||
Sbjct: 5 tactccctccgtcccaaaataagtgtcttgagcttagtaaaaatttgtactagagatagt 64
Query: 107 acaaagttaagacacttattttggaacgaagggagtacaa 146
|||||||| ||||||||||||||| | | |||||||||||
Sbjct: 65 acaaagttgagacacttattttgggatggagggagtacaa 104
>RF00906;MIR1122;AY133251.1/901-1005 112509:Hordeum vulgare subsp.
vulgare (domesticated barley)
Length = 105
Score = 93.7 bits (47), Expect = 8e-19
Identities = 86/99 (86%)
Strand = Plus / Plus
Query: 47 tactctctccgtcctaaaataactgtctaaagcttaatacaactttgtactagagctagt 106
||||| |||||| | ||||||| ||||| ||| || ||||| |||||||||||||||||
Sbjct: 5 tactccctccgttccaaaataagtgtcttgagcgtagtacaattttgtactagagctagt 64
Query: 107 acaaagttaagacacttattttggaacgaagggagtaca 145
|||||||| ||||| ||||||||| ||| ||||||||||
Sbjct: 65 acaaagttgagacagttattttgggacggagggagtaca 103
Score = 50.1 bits (25), Expect = 1e-05
Identities = 28/29 (96%)
Strand = Plus / Minus
Query: 115 aagacacttattttggaacgaagggagta 143
|||||||||||||||||||| ||||||||
Sbjct: 33 aagacacttattttggaacggagggagta 5
>RF00906;MIR1122;AF521177.1/206122-206018 4513:Hordeum vulgare
Length = 105
Score = 91.7 bits (46), Expect = 3e-18
Identities = 61/66 (92%)
Strand = Plus / Plus
Query: 78 gcttaatacaactttgtactagagctagtacaaagttaagacacttattttggaacgaag 137
||||| ||||||||||||||||||||||||||||||| ||||| |||||||| |||| ||
Sbjct: 36 gcttagtacaactttgtactagagctagtacaaagttgagacatttattttgaaacggag 95
Query: 138 ggagta 143
||||||
Sbjct: 96 ggagta 101
>RF00906;MIR1122;DQ995510.1/1615-1718 4513:Hordeum vulgare
Length = 104
Score = 91.7 bits (46), Expect = 3e-18
Identities = 86/98 (87%), Gaps = 1/98 (1%)
Strand = Plus / Plus
Query: 47 tactctctccgtcctaaaataactgtctaaagcttaatacaactttgtactagagctagt 106
||||| ||||||| ||||||||||||| || ||| |||||||||||||||||||||||
Sbjct: 5 tactccctccgtctcaaaataactgtctcaa-ctttgtacaactttgtactagagctagt 63
Query: 107 acaaagttaagacacttattttggaacgaagggagtac 144
|||||||| ||||| ||||||||| | | |||||||||
Sbjct: 64 acaaagttgagacagttattttgggatggagggagtac 101
>RF00906;MIR1122;EU593539.1/914-1018 4513:Hordeum vulgare
Length = 105
Score = 89.7 bits (45), Expect = 1e-17
Identities = 84/97 (86%)
Strand = Plus / Plus
Query: 47 tactctctccgtcctaaaataactgtctaaagcttaatacaactttgtactagagctagt 106
||||| |||||||| ||||||||||||| ||||||| || || ||| ||||||| |||||
Sbjct: 5 tactccctccgtcccaaaataactgtcttaagcttagtataaatttatactagatctagt 64
Query: 107 acaaagttaagacacttattttggaacgaagggagta 143
| |||||| ||||| ||||||||| ||| ||||||||
Sbjct: 65 ataaagttgagacagttattttgggacggagggagta 101
>RF00906;MIR1122;AY943294.1/62260-62364 112509:Hordeum vulgare
subsp. vulgare (domesticated barley)
Length = 105
Score = 85.7 bits (43), Expect = 2e-16
Identities = 85/99 (85%)
Strand = Plus / Plus
Query: 47 tactctctccgtcctaaaataactgtctaaagcttaatacaactttgtactagagctagt 106
||||| |||||| | ||||||| ||||| ||||||||||||| ||||||||| | ||| |
Sbjct: 5 tactccctccgttccaaaataagtgtcttaagcttaatacaattttgtactaaatctaat 64
Query: 107 acaaagttaagacacttattttggaacgaagggagtaca 145
|||||||| ||||| ||||||||| ||| ||| ||||||
Sbjct: 65 acaaagttgagacagttattttgggacggaggaagtaca 103
Score = 54.0 bits (27), Expect = 7e-07
Identities = 30/31 (96%)
Strand = Plus / Minus
Query: 113 ttaagacacttattttggaacgaagggagta 143
|||||||||||||||||||||| ||||||||
Sbjct: 35 ttaagacacttattttggaacggagggagta 5
>RF00906;MIR1122;AK252392.1/1279-1175 112509:Hordeum vulgare subsp.
vulgare (domesticated barley)
Length = 105
Score = 85.7 bits (43), Expect = 2e-16
Identities = 79/91 (86%)
Strand = Plus / Plus
Query: 53 ctccgtcctaaaataactgtctaaagcttaatacaactttgtactagagctagtacaaag 112
|||||||| ||||||| ||||| ||||||| ||||| ||| ||| ||||||||||||||
Sbjct: 11 ctccgtcccaaaataagtgtcttaagcttagtacaattttatacatgagctagtacaaag 70
Query: 113 ttaagacacttattttggaacgaagggagta 143
|||||||| |||||||| ||| ||||||||
Sbjct: 71 ttaagacagatattttgggacggagggagta 101
>RF00906;MIR1122;EU282771.1/632-528 112509:Hordeum vulgare subsp.
vulgare (domesticated barley)
Length = 105
Score = 85.7 bits (43), Expect = 2e-16
Identities = 85/99 (85%)
Strand = Plus / Plus
Query: 45 agtactctctccgtcctaaaataactgtctaaagcttaatacaactttgtactagagcta 104
||||||| |||||||| ||||||||| ||| || |||| ||||||||| |||||||||||
Sbjct: 3 agtactccctccgtcccaaaataactttctcaaacttagtacaactttatactagagcta 62
Query: 105 gtacaaagttaagacacttattttggaacgaagggagta 143
|| |||||| ||| |||||||||| ||| ||||||||
Sbjct: 63 gtgtaaagttgagatacttattttgagacggagggagta 101
>RF00906;MIR1122;AJ400714.1/3663-3767 4565:Triticum aestivum (bread
wheat)
Length = 105
Score = 83.8 bits (42), Expect = 8e-16
Identities = 84/98 (85%)
Strand = Plus / Minus
Query: 47 tactctctccgtcctaaaataactgtctaaagcttaatacaactttgtactagagctagt 106
||||| |||||||| ||||||| ||||| || |||| |||||||||||||||||| ||||
Sbjct: 101 tactccctccgtcccaaaataagtgtctcaaccttagtacaactttgtactagagttagt 42
Query: 107 acaaagttaagacacttattttggaacgaagggagtac 144
||| || ||||||||||||||| ||| | |||||||
Sbjct: 41 gtaaaattgagacacttattttgggacggaaggagtac 4
>RF00906;MIR1122;AJ234485.1/114-218 4513:Hordeum vulgare
Length = 105
Score = 83.8 bits (42), Expect = 8e-16
Identities = 75/86 (87%)
Strand = Plus / Plus
Query: 44 tagtactctctccgtcctaaaataactgtctaaagcttaatacaactttgtactagagct 103
|||||||| ||||||| ||||||| ||||| || |||| ||||| ||||||||||||||
Sbjct: 2 tagtactccctccgtctcaaaataagtgtcttaatcttagtacaattttgtactagagct 61
Query: 104 agtacaaagttaagacacttattttg 129
||||||| ||| ||||| ||||||||
Sbjct: 62 agtacaatgttgagacagttattttg 87
>RF00906;MIR1122;FJ184990.1/3303-3406 4565:Triticum aestivum (bread
wheat)
Length = 104
Score = 81.8 bits (41), Expect = 3e-15
Identities = 84/97 (86%), Gaps = 1/97 (1%)
Strand = Plus / Plus
Query: 47 tactctctccgtcctaaaataactgtctaaagcttaatacaactttgtactagagctagt 106
||||| |||||||| ||||||| ||||| || |||| ||||| ||| |||||||| ||||
Sbjct: 5 tactccctccgtcccaaaataagtgtctcaaccttagtacaattttatactagagttagt 64
Query: 107 acaaagttaagacacttattttggaacgaagggagta 143
|||||| | ||||||||||||||| ||| ||||||||
Sbjct: 65 acaaag-tgagacacttattttgggacggagggagta 100
>RF00906;MIR1122;AK249748.1/2677-2573 112509:Hordeum vulgare subsp.
vulgare (domesticated barley)
Length = 105
Score = 81.8 bits (41), Expect = 3e-15
Identities = 86/101 (85%)
Strand = Plus / Minus
Query: 44 tagtactctctccgtcctaaaataactgtctaaagcttaatacaactttgtactagagct 103
|||||||| ||||||| ||||||| ||||| || |||| || || ||| || || ||||
Sbjct: 104 tagtactccctccgtcgcaaaataaatgtcttaaacttagtataaatttatagtaaagct 45
Query: 104 agtacaaagttaagacacttattttggaacgaagggagtac 144
||||||||||||||||| |||||||||||| |||||||||
Sbjct: 44 agtacaaagttaagacagttattttggaacagagggagtac 4
>RF00906;MIR1122;DQ445238.1/5626-5730 112509:Hordeum vulgare subsp.
vulgare (domesticated barley)
Length = 105
Score = 81.8 bits (41), Expect = 3e-15
Identities = 83/97 (85%)
Strand = Plus / Plus
Query: 47 tactctctccgtcctaaaataactgtctaaagcttaatacaactttgtactagagctagt 106
||||| |||||||| ||||||||||||| ||||||| || || ||| || |||| |||||
Sbjct: 5 tactccctccgtcccaaaataactgtcttaagcttagtataaatttatattagatctagt 64
Query: 107 acaaagttaagacacttattttggaacgaagggagta 143
| |||||| ||||| ||||||||| ||| ||||||||
Sbjct: 65 ataaagttgagacagttattttgggacggagggagta 101
>RF00906;MIR1122;EU282768.1/632-528 112509:Hordeum vulgare subsp.
vulgare (domesticated barley)
Length = 105
Score = 77.8 bits (39), Expect = 5e-14
Identities = 84/99 (84%)
Strand = Plus / Plus
Query: 45 agtactctctccgtcctaaaataactgtctaaagcttaatacaactttgtactagagcta 104
||||||| |||||||| ||||||||| ||| || |||| ||||||||| |||||||||||
Sbjct: 3 agtactccctccgtcccaaaataactttctcaaacttagtacaactttatactagagcta 62
Query: 105 gtacaaagttaagacacttattttggaacgaagggagta 143
|| |||| | ||| |||||||||| ||| ||||||||
Sbjct: 63 gtgtaaagctgagatacttattttgagacggagggagta 101
>RF00906;MIR1122;AY821694.1/1308-1197 37674:Crithopsis delileana
Length = 112
Score = 77.8 bits (39), Expect = 5e-14
Identities = 60/67 (89%)
Strand = Plus / Plus
Query: 77 agcttaatacaactttgtactagagctagtacaaagttaagacacttattttggaacgaa 136
|||||| ||||||||||||||| || |||||||||||| ||||||||||||||| | | |
Sbjct: 42 agcttagtacaactttgtactaaagttagtacaaagttgagacacttattttgggatgga 101
Query: 137 gggagta 143
|||||||
Sbjct: 102 gggagta 108
>RF00906;MIR1122;DQ901436.1/1229-1333 4565:Triticum aestivum (bread
wheat)
Length = 105
Score = 75.8 bits (38), Expect = 2e-13
Identities = 53/58 (91%)
Strand = Plus / Minus
Query: 84 tacaactttgtactagagctagtacaaagttaagacacttattttggaacgaagggag 141
|||||||||||| || ||||||||||||||| ||||||||||||||| ||| ||||||
Sbjct: 64 tacaactttgtattaaagctagtacaaagttgagacacttattttgggacggagggag 7
>RF00906;MIR1122;AY663392.1/117099-117203 4565:Triticum aestivum
(bread wheat)
Length = 105
Score = 67.9 bits (34), Expect = 5e-11
Identities = 76/90 (84%)
Strand = Plus / Plus
Query: 54 tccgtcctaaaataactgtctaaagcttaatacaactttgtactagagctagtacaaagt 113
||||| ||||||||| ||||| || |||| || |||||| ||||| ||||| |||||| |
Sbjct: 12 tccgttctaaaataagtgtctcaatcttagtataactttatactaaagctaatacaaaat 71
Query: 114 taagacacttattttggaacgaagggagta 143
||| ||||||||||||| | | ||||||||
Sbjct: 72 taacacacttattttgggatggagggagta 101
>RF00906;MIR1122;AF488415.1/78603-78755 4568:Triticum monococcum
Length = 153
Score = 65.9 bits (33), Expect = 2e-10
Identities = 57/65 (87%)
Strand = Plus / Plus
Query: 79 cttaatacaactttgtactagagctagtacaaagttaagacacttattttggaacgaagg 138
|||| ||||||||||||||| || ||||||||| || ||||| ||||||||| ||| |||
Sbjct: 85 cttagtacaactttgtactaaagttagtacaaacttgagacagttattttgggacggagg 144
Query: 139 gagta 143
|||||
Sbjct: 145 gagta 149
Score = 48.1 bits (24), Expect = 4e-05
Identities = 54/64 (84%)
Strand = Plus / Plus
Query: 56 cgtcctaaaataactgtctaaagcttaatacaactttgtactagagctagtacaaagtta 115
||||| ||||||| ||||| || |||| |||||||||| |||| | ||||||||||||
Sbjct: 14 cgtcccaaaataagtgtctcaaccttagtacaactttgcactaaatttagtacaaagttg 73
Query: 116 agac 119
||||
Sbjct: 74 agac 77
Score = 44.1 bits (22), Expect = 7e-04
Identities = 25/26 (96%)
Strand = Plus / Minus
Query: 116 agacacttattttggaacgaagggag 141
||||||||||||||| ||||||||||
Sbjct: 32 agacacttattttgggacgaagggag 7
>RF00906;MIR1122;EU282770.1/593-711 112509:Hordeum vulgare subsp.
vulgare (domesticated barley)
Length = 119
Score = 61.9 bits (31), Expect = 3e-09
Identities = 73/87 (83%)
Strand = Plus / Minus
Query: 57 gtcctaaaataactgtctaaagcttaatacaactttgtactagagctagtacaaagttaa 116
|||| ||||||||| ||| || |||| ||||||||| |||||||||||| |||||| |
Sbjct: 91 gtcccaaaataactttctcaaacttagtacaactttatactagagctagggtaaagttga 32
Query: 117 gacacttattttggaacgaagggagta 143
||||| ||||||| ||| ||||||||
Sbjct: 31 gacacctattttgagacggagggagta 5
>RF00906;MIR1122;FJ477093.1/40908-41001 4513:Hordeum vulgare
Length = 94
Score = 54.0 bits (27), Expect = 7e-07
Identities = 51/59 (86%)
Strand = Plus / Plus
Query: 86 caactttgtactagagctagtacaaagttaagacacttattttggaacgaagggagtac 144
||||||||||||| || ||||| |||||| || |||||| ||||| ||| |||||||||
Sbjct: 33 caactttgtactaaagttagtataaagttgagtcacttaatttgggacggagggagtac 91
>RF00906;MIR1122;AF488415.1/128685-128592 4568:Triticum monococcum
Length = 94
Score = 52.0 bits (26), Expect = 3e-06
Identities = 50/58 (86%)
Strand = Plus / Plus
Query: 86 caactttgtactagagctagtacaaagttaagacacttattttggaacgaagggagta 143
||||||||||||| || |||||||||||| || || |||||||||| | ||||||||
Sbjct: 33 caactttgtactaaagttagtacaaagttgagtcatctattttggaatggagggagta 90
>RF00906;MIR1122;AF521177.1/81577-81474 4513:Hordeum vulgare
Length = 104
Score = 50.1 bits (25), Expect = 1e-05
Identities = 37/41 (90%)
Strand = Plus / Plus
Query: 103 tagtacaaagttaagacacttattttggaacgaagggagta 143
|||||||||||| || |||||||||||| ||| ||||||||
Sbjct: 60 tagtacaaagttgagtcacttattttgggacggagggagta 100
>RF00906;MIR1122;FJ374625.1/3001-2870 4573:Aegilops speltoides
Length = 132
Score = 50.1 bits (25), Expect = 1e-05
Identities = 37/41 (90%)
Strand = Plus / Minus
Query: 103 tagtacaaagttaagacacttattttggaacgaagggagta 143
|||||||||||| || |||||||||||| ||| ||||||||
Sbjct: 45 tagtacaaagttgagtcacttattttgggacggagggagta 5
>RF00906;MIR1122;AB182945.1/6773-6906 4565:Triticum aestivum (bread
wheat)
Length = 134
Score = 48.1 bits (24), Expect = 4e-05
Identities = 27/28 (96%)
Strand = Plus / Plus
Query: 116 agacacttattttggaacgaagggagta 143
||||||||||||||||||| ||||||||
Sbjct: 103 agacacttattttggaacggagggagta 130
>RF00906;MIR1122;AACV01008110.1/23533-23408 39947:Oryza sativa
Japonica Group
Length = 126
Score = 46.1 bits (23), Expect = 2e-04
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 122 ttattttggaacgaagggagtac 144
|||||||||||||||||||||||
Sbjct: 101 ttattttggaacgaagggagtac 123
>RF00906;MIR1122;DQ871219.1/88217-88124 85692:Triticum turgidum
subsp. dicoccoides
Length = 94
Score = 44.1 bits (22), Expect = 7e-04
Identities = 49/58 (84%)
Strand = Plus / Plus
Query: 86 caactttgtactagagctagtacaaagttaagacacttattttggaacgaagggagta 143
||||||||||||| || |||||||||||| || | |||||| ||||| ||||||||
Sbjct: 33 caactttgtactaaagatagtacaaagttgagtcgtctattttagaacggagggagta 90
>RF00906;MIR1122;AF325197.1/3732-3639 4565:Triticum aestivum (bread
wheat)
Length = 94
Score = 44.1 bits (22), Expect = 7e-04
Identities = 49/58 (84%)
Strand = Plus / Plus
Query: 86 caactttgtactagagctagtacaaagttaagacacttattttggaacgaagggagta 143
||||||||||||| || |||||||||||| || || ||||||| |||| ||| ||||
Sbjct: 33 caactttgtactaaagttagtacaaagttgagtcatctattttgaaacggaggaagta 90
>RF00906;MIR1122;DQ537335.1/8332-8425 4565:Triticum aestivum (bread
wheat)
Length = 94
Score = 44.1 bits (22), Expect = 7e-04
Identities = 49/58 (84%)
Strand = Plus / Minus
Query: 86 caactttgtactagagctagtacaaagttaagacacttattttggaacgaagggagta 143
||||||| |||| || |||||||||||| || || |||||||||||| ||||||||
Sbjct: 62 caactttacactaaagttagtacaaagttgagtcatctattttggaacggagggagta 5
>RF00906;MIR1122;AK250735.1/291-376 112509:Hordeum vulgare subsp.
vulgare (domesticated barley)
Length = 86
Score = 44.1 bits (22), Expect = 7e-04
Identities = 38/42 (90%), Gaps = 1/42 (2%)
Strand = Plus / Minus
Query: 103 tagtacaaagtta-agacacttattttggaacgaagggagta 143
|||||||||||| ||||||||||||||| ||| ||||||||
Sbjct: 46 tagtacaaagttggagacacttattttgggacggagggagta 5
>RF00906;MIR1122;AF091802.1/1995-2099 37682:Aegilops tauschii
Length = 105
Score = 44.1 bits (22), Expect = 7e-04
Identities = 37/42 (88%)
Strand = Plus / Minus
Query: 103 tagtacaaagttaagacacttattttggaacgaagggagtac 144
|||||||||||| || || |||||||||||| |||||||||
Sbjct: 45 tagtacaaagttgagtcatctattttggaacggagggagtac 4
Score = 44.1 bits (22), Expect = 7e-04
Identities = 46/54 (85%)
Strand = Plus / Plus
Query: 90 tttgtactagagctagtacaaagttaagacacttattttggaacgaagggagta 143
||||||||| || |||||||||||| || || |||||| ||||| ||||||||
Sbjct: 48 tttgtactatagttagtacaaagttgagtcatctattttagaacggagggagta 101
