miRNEST 2.0, an integrative microRNA resource :: BLAST
>54784_vvi-miR162:pmrd
Length = 103
Score = 85.7 bits (43), Expect = 8e-18
Identities = 91/105 (86%), Gaps = 4/105 (3%)
Strand = Plus / Plus
Query: 22 tgaagtcactggaggcagcggttcatcgatctcttcctgaatttggctgtggagtcatac 81
||||||||||||| ||||||||||||||||||||||||||| || | |||| | | |
Sbjct: 1 tgaagtcactggatgcagcggttcatcgatctcttcctgaaatt-gttgtgaa---aaaa 56
Query: 82 acaaagcaagaatcggtcgataaacctctgcatccagcgctcact 126
|| | ||||||||||||||||||||||||||||||||| |||||
Sbjct: 57 gcagatcaagaatcggtcgataaacctctgcatccagcgttcact 101
>48545_gma-miR162a:pmrd
Length = 102
Score = 77.8 bits (39), Expect = 2e-15
Identities = 42/43 (97%)
Strand = Plus / Plus
Query: 21 gtgaagtcactggaggcagcggttcatcgatctcttcctgaat 63
|||||||||||||| ||||||||||||||||||||||||||||
Sbjct: 1 gtgaagtcactggatgcagcggttcatcgatctcttcctgaat 43
Score = 63.9 bits (32), Expect = 3e-11
Identities = 35/36 (97%)
Strand = Plus / Plus
Query: 91 gaatcggtcgataaacctctgcatccagcgctcact 126
|||||| |||||||||||||||||||||||||||||
Sbjct: 66 gaatcgatcgataaacctctgcatccagcgctcact 101
>48546_gma-miR162m:pmrd
Length = 367
Score = 73.8 bits (37), Expect = 3e-14
Identities = 37/37 (100%)
Strand = Plus / Plus
Query: 98 tcgataaacctctgcatccagcgctcactttgcctct 134
|||||||||||||||||||||||||||||||||||||
Sbjct: 1 tcgataaacctctgcatccagcgctcactttgcctct 37
>48423_cpa-miR162a:pmrd
Length = 109
Score = 73.8 bits (37), Expect = 3e-14
Identities = 37/37 (100%)
Strand = Plus / Plus
Query: 24 aagtcactggaggcagcggttcatcgatctcttcctg 60
|||||||||||||||||||||||||||||||||||||
Sbjct: 7 aagtcactggaggcagcggttcatcgatctcttcctg 43
>47354_ath-miRf10254-akr:pmrd
Length = 115
Score = 69.9 bits (35), Expect = 5e-13
Identities = 38/39 (97%)
Strand = Plus / Minus
Query: 84 aaagcaagaatcggtcgataaacctctgcatccagcgct 122
||||||||||||| |||||||||||||||||||||||||
Sbjct: 49 aaagcaagaatcgatcgataaacctctgcatccagcgct 11
Score = 56.0 bits (28), Expect = 7e-09
Identities = 31/32 (96%)
Strand = Plus / Minus
Query: 21 gtgaagtcactggaggcagcggttcatcgatc 52
|||||||| |||||||||||||||||||||||
Sbjct: 111 gtgaagtcgctggaggcagcggttcatcgatc 80
>46938_ath-miR162b:pmrd
Length = 111
Score = 69.9 bits (35), Expect = 5e-13
Identities = 38/39 (97%)
Strand = Plus / Plus
Query: 84 aaagcaagaatcggtcgataaacctctgcatccagcgct 122
||||||||||||| |||||||||||||||||||||||||
Sbjct: 65 aaagcaagaatcgatcgataaacctctgcatccagcgct 103
Score = 56.0 bits (28), Expect = 7e-09
Identities = 31/32 (96%)
Strand = Plus / Plus
Query: 21 gtgaagtcactggaggcagcggttcatcgatc 52
|||||||| |||||||||||||||||||||||
Sbjct: 3 gtgaagtcgctggaggcagcggttcatcgatc 34
>52400_ptc-miRf10578-akr:pmrd
Length = 103
Score = 67.9 bits (34), Expect = 2e-12
Identities = 37/38 (97%)
Strand = Plus / Minus
Query: 23 gaagtcactggaggcagcggttcatcgatctcttcctg 60
|||| |||||||||||||||||||||||||||||||||
Sbjct: 102 gaagacactggaggcagcggttcatcgatctcttcctg 65
Score = 50.1 bits (25), Expect = 5e-07
Identities = 25/25 (100%)
Strand = Plus / Minus
Query: 98 tcgataaacctctgcatccagcgct 122
|||||||||||||||||||||||||
Sbjct: 28 tcgataaacctctgcatccagcgct 4
>52399_ptc-miRf10577-akr:pmrd
Length = 103
Score = 67.9 bits (34), Expect = 2e-12
Identities = 37/38 (97%)
Strand = Plus / Minus
Query: 23 gaagtcactggaggcagcggttcatcgatctcttcctg 60
|||| |||||||||||||||||||||||||||||||||
Sbjct: 102 gaagacactggaggcagcggttcatcgatctcttcctg 65
Score = 50.1 bits (25), Expect = 5e-07
Identities = 25/25 (100%)
Strand = Plus / Minus
Query: 98 tcgataaacctctgcatccagcgct 122
|||||||||||||||||||||||||
Sbjct: 28 tcgataaacctctgcatccagcgct 4
>51616_ptc-miR162a:pmrd
Length = 107
Score = 67.9 bits (34), Expect = 2e-12
Identities = 37/38 (97%)
Strand = Plus / Plus
Query: 23 gaagtcactggaggcagcggttcatcgatctcttcctg 60
|||| |||||||||||||||||||||||||||||||||
Sbjct: 4 gaagacactggaggcagcggttcatcgatctcttcctg 41
Score = 50.1 bits (25), Expect = 5e-07
Identities = 25/25 (100%)
Strand = Plus / Plus
Query: 98 tcgataaacctctgcatccagcgct 122
|||||||||||||||||||||||||
Sbjct: 78 tcgataaacctctgcatccagcgct 102
>48493_ghr-miR162a:pmrd
Length = 148
Score = 67.9 bits (34), Expect = 2e-12
Identities = 34/34 (100%)
Strand = Plus / Plus
Query: 28 cactggaggcagcggttcatcgatctcttcctga 61
||||||||||||||||||||||||||||||||||
Sbjct: 22 cactggaggcagcggttcatcgatctcttcctga 55
>54387_rco-miR162:pmrd
Length = 96
Score = 65.9 bits (33), Expect = 8e-12
Identities = 33/33 (100%)
Strand = Plus / Plus
Query: 28 cactggaggcagcggttcatcgatctcttcctg 60
|||||||||||||||||||||||||||||||||
Sbjct: 1 cactggaggcagcggttcatcgatctcttcctg 33
Score = 50.1 bits (25), Expect = 5e-07
Identities = 28/29 (96%)
Strand = Plus / Plus
Query: 91 gaatcggtcgataaacctctgcatccagc 119
|||||| ||||||||||||||||||||||
Sbjct: 68 gaatcgatcgataaacctctgcatccagc 96
>52498_ptc-miRf10676-akr:pmrd
Length = 101
Score = 63.9 bits (32), Expect = 3e-11
Identities = 38/40 (95%)
Strand = Plus / Minus
Query: 23 gaagtcactggaggcagcggttcatcgatctcttcctgaa 62
|||| |||||||||||||||||||||||||| ||||||||
Sbjct: 101 gaagacactggaggcagcggttcatcgatcttttcctgaa 62
Score = 42.1 bits (21), Expect = 1e-04
Identities = 21/21 (100%)
Strand = Plus / Minus
Query: 98 tcgataaacctctgcatccag 118
|||||||||||||||||||||
Sbjct: 27 tcgataaacctctgcatccag 7
>52497_ptc-miRf10675-akr:pmrd
Length = 105
Score = 63.9 bits (32), Expect = 3e-11
Identities = 38/40 (95%)
Strand = Plus / Minus
Query: 23 gaagtcactggaggcagcggttcatcgatctcttcctgaa 62
|||| |||||||||||||||||||||||||| ||||||||
Sbjct: 103 gaagacactggaggcagcggttcatcgatcttttcctgaa 64
Score = 42.1 bits (21), Expect = 1e-04
Identities = 21/21 (100%)
Strand = Plus / Minus
Query: 98 tcgataaacctctgcatccag 118
|||||||||||||||||||||
Sbjct: 29 tcgataaacctctgcatccag 9
>52244_ptc-miRf10422-akr:pmrd
Length = 105
Score = 63.9 bits (32), Expect = 3e-11
Identities = 38/40 (95%)
Strand = Plus / Minus
Query: 23 gaagtcactggaggcagcggttcatcgatctcttcctgaa 62
|||| |||||||||||||||||||||||||| ||||||||
Sbjct: 103 gaagacactggaggcagcggttcatcgatcttttcctgaa 64
Score = 42.1 bits (21), Expect = 1e-04
Identities = 21/21 (100%)
Strand = Plus / Minus
Query: 98 tcgataaacctctgcatccag 118
|||||||||||||||||||||
Sbjct: 29 tcgataaacctctgcatccag 9
>52243_ptc-miRf10421-akr:pmrd
Length = 101
Score = 63.9 bits (32), Expect = 3e-11
Identities = 38/40 (95%)
Strand = Plus / Minus
Query: 23 gaagtcactggaggcagcggttcatcgatctcttcctgaa 62
|||| |||||||||||||||||||||||||| ||||||||
Sbjct: 101 gaagacactggaggcagcggttcatcgatcttttcctgaa 62
Score = 42.1 bits (21), Expect = 1e-04
Identities = 21/21 (100%)
Strand = Plus / Minus
Query: 98 tcgataaacctctgcatccag 118
|||||||||||||||||||||
Sbjct: 27 tcgataaacctctgcatccag 7
>51618_ptc-miR162c:pmrd
Length = 107
Score = 63.9 bits (32), Expect = 3e-11
Identities = 38/40 (95%)
Strand = Plus / Plus
Query: 23 gaagtcactggaggcagcggttcatcgatctcttcctgaa 62
|||| |||||||||||||||||||||||||| ||||||||
Sbjct: 4 gaagacactggaggcagcggttcatcgatcttttcctgaa 43
Score = 42.1 bits (21), Expect = 1e-04
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 98 tcgataaacctctgcatccag 118
|||||||||||||||||||||
Sbjct: 78 tcgataaacctctgcatccag 98
>51617_ptc-miR162b:pmrd
Length = 107
Score = 63.9 bits (32), Expect = 3e-11
Identities = 38/40 (95%)
Strand = Plus / Plus
Query: 23 gaagtcactggaggcagcggttcatcgatctcttcctgaa 62
|||| |||||||||||||||||||||||||| ||||||||
Sbjct: 4 gaagacactggaggcagcggttcatcgatcttttcctgaa 43
Score = 42.1 bits (21), Expect = 1e-04
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 98 tcgataaacctctgcatccag 118
|||||||||||||||||||||
Sbjct: 78 tcgataaacctctgcatccag 98
>46937_ath-miR162a:pmrd
Length = 140
Score = 63.9 bits (32), Expect = 3e-11
Identities = 35/36 (97%)
Strand = Plus / Plus
Query: 25 agtcactggaggcagcggttcatcgatctcttcctg 60
|||| |||||||||||||||||||||||||||||||
Sbjct: 20 agtcgctggaggcagcggttcatcgatctcttcctg 55
Score = 50.1 bits (25), Expect = 5e-07
Identities = 34/37 (91%)
Strand = Plus / Plus
Query: 84 aaagcaagaatcggtcgataaacctctgcatccagcg 120
|||||| |||| | |||||||||||||||||||||||
Sbjct: 75 aaagcatgaatagatcgataaacctctgcatccagcg 111
>48682_llu-miR162:pmrd
Length = 80
Score = 58.0 bits (29), Expect = 2e-09
Identities = 35/37 (94%)
Strand = Plus / Plus
Query: 30 ctggaggcagcggttcatcgatctcttcctgaatttg 66
||||| ||||||||| |||||||||||||||||||||
Sbjct: 1 ctggaagcagcggtttatcgatctcttcctgaatttg 37
Score = 54.0 bits (27), Expect = 3e-08
Identities = 36/39 (92%)
Strand = Plus / Plus
Query: 80 acacaaagcaagaatcggtcgataaacctctgcatccag 118
||||||| || |||||| |||||||||||||||||||||
Sbjct: 42 acacaaaccatgaatcgatcgataaacctctgcatccag 80
>54948_zma-miR162b:pmrd
Length = 130
Score = 56.0 bits (28), Expect = 7e-09
Identities = 28/28 (100%)
Strand = Plus / Plus
Query: 91 gaatcggtcgataaacctctgcatccag 118
||||||||||||||||||||||||||||
Sbjct: 103 gaatcggtcgataaacctctgcatccag 130
>54542_sly-miR162:pmrd
Length = 99
Score = 56.0 bits (28), Expect = 7e-09
Identities = 28/28 (100%)
Strand = Plus / Plus
Query: 91 gaatcggtcgataaacctctgcatccag 118
||||||||||||||||||||||||||||
Sbjct: 72 gaatcggtcgataaacctctgcatccag 99
>48707_mtr-miR162d:pmrd
Length = 87
Score = 56.0 bits (28), Expect = 7e-09
Identities = 34/36 (94%)
Strand = Plus / Plus
Query: 30 ctggaggcagcggttcatcgatctcttcctgaattt 65
||||| |||||||||||||||||| |||||||||||
Sbjct: 1 ctggatgcagcggttcatcgatctgttcctgaattt 36
Score = 56.0 bits (28), Expect = 7e-09
Identities = 28/28 (100%)
Strand = Plus / Plus
Query: 91 gaatcggtcgataaacctctgcatccag 118
||||||||||||||||||||||||||||
Sbjct: 60 gaatcggtcgataaacctctgcatccag 87
>48706_mtr-miR162c:pmrd
Length = 86
Score = 56.0 bits (28), Expect = 7e-09
Identities = 34/36 (94%)
Strand = Plus / Minus
Query: 30 ctggaggcagcggttcatcgatctcttcctgaattt 65
||||| |||||||||||||||||| |||||||||||
Sbjct: 86 ctggatgcagcggttcatcgatctgttcctgaattt 51
Score = 54.0 bits (27), Expect = 3e-08
Identities = 27/27 (100%)
Strand = Plus / Minus
Query: 91 gaatcggtcgataaacctctgcatcca 117
|||||||||||||||||||||||||||
Sbjct: 27 gaatcggtcgataaacctctgcatcca 1
>48685_lsa-miR162:pmrd
Length = 89
Score = 56.0 bits (28), Expect = 7e-09
Identities = 28/28 (100%)
Strand = Plus / Plus
Query: 98 tcgataaacctctgcatccagcgctcac 125
||||||||||||||||||||||||||||
Sbjct: 1 tcgataaacctctgcatccagcgctcac 28
>48705_mtr-miR162b:pmrd
Length = 85
Score = 54.0 bits (27), Expect = 3e-08
Identities = 33/35 (94%)
Strand = Plus / Plus
Query: 31 tggaggcagcggttcatcgatctcttcctgaattt 65
|||| |||||||||||||||||| |||||||||||
Sbjct: 1 tggatgcagcggttcatcgatctgttcctgaattt 35
Score = 54.0 bits (27), Expect = 3e-08
Identities = 27/27 (100%)
Strand = Plus / Plus
Query: 91 gaatcggtcgataaacctctgcatcca 117
|||||||||||||||||||||||||||
Sbjct: 59 gaatcggtcgataaacctctgcatcca 85
>48834_osa-miR162a:pmrd
Length = 171
Score = 48.1 bits (24), Expect = 2e-06
Identities = 27/28 (96%)
Strand = Plus / Plus
Query: 91 gaatcggtcgataaacctctgcatccag 118
|||||| |||||||||||||||||||||
Sbjct: 136 gaatcgatcgataaacctctgcatccag 163
>48690_mdo-miR162:pmrd
Length = 88
Score = 48.1 bits (24), Expect = 2e-06
Identities = 27/28 (96%)
Strand = Plus / Plus
Query: 91 gaatcggtcgataaacctctgcatccag 118
|||||||||||||||||| |||||||||
Sbjct: 61 gaatcggtcgataaacctttgcatccag 88
Score = 40.1 bits (20), Expect = 4e-04
Identities = 23/24 (95%)
Strand = Plus / Plus
Query: 30 ctggaggcagcggttcatcgatct 53
||||||||| ||||||||||||||
Sbjct: 1 ctggaggcatcggttcatcgatct 24
>48835_osa-miR162b:pmrd
Length = 134
Score = 46.1 bits (23), Expect = 7e-06
Identities = 41/47 (87%)
Strand = Plus / Plus
Query: 82 acaaagcaagaatcggtcgataaacctctgcatccagcgctcacttt 128
|||| ||| |||||| ||||||| ||||||||||||| ||||||||
Sbjct: 88 acaacgcaggaatcgatcgataagcctctgcatccagatctcacttt 134
>48836_osa-miR162m:pmrd
Length = 114
Score = 42.1 bits (21), Expect = 1e-04
Identities = 33/37 (89%)
Strand = Plus / Plus
Query: 82 acaaagcaagaatcggtcgataaacctctgcatccag 118
|||| ||| |||||| ||||||| |||||||||||||
Sbjct: 78 acaacgcaggaatcgatcgataagcctctgcatccag 114
