miRNEST 2.0: an integrative microRNA resource miRNEST 2.0, an integrative microRNA resource :: BLAST


>45994_miR1436:micropc
          Length = 162

 Score =  109 bits (55), Expect = 8e-25
 Identities = 119/139 (85%), Gaps = 1/139 (0%)
 Strand = Plus / Minus

                                                                       
Query: 35  ataagactttttagagattgcactataa-actacatacggatatatatagacatatttta 93
           ||||| ||||||||||||| ||||| |  ||||||||||||| |||||||||||| ||||
Sbjct: 143 ataagtctttttagagattccactagaggactacatacggatgtatatagacatacttta 84

                                                                       
Query: 94  gagtgtacattcactcattttgttccgtatgtagtcgcctagtgaaatctctaaaatgtc 153
           ||||||| |||||||||||||| |  ||||||||||   ||| |||||| || ||| | |
Sbjct: 83  gagtgtagattcactcattttgctttgtatgtagtcctttagagaaatcgcttaaaagac 24

                              
Query: 154 ttatattttgaaacggagg 172
           |||||||| ||||||||||
Sbjct: 23  ttatatttagaaacggagg 5



 Score = 63.9 bits (32), Expect = 4e-11
 Identities = 53/60 (88%)
 Strand = Plus / Plus

                                                                       
Query: 117 tccgtatgtagtcgcctagtgaaatctctaaaatgtcttatattttgaaacggagggagt 176
           |||||||||||||  |||||| ||||||||||| | |||||||| || ||||||||||||
Sbjct: 103 tccgtatgtagtcctctagtggaatctctaaaaagacttatattatggaacggagggagt 162




>45049_miR1126:micropc
          Length = 86

 Score = 77.8 bits (39), Expect = 3e-15
 Identities = 57/63 (90%)
 Strand = Plus / Plus

                                                                       
Query: 63  actacatacggatatatatagacatattttagagtgtacattcactcattttgttccgta 122
           ||||||||||||| |||||||||||| | ||||||||||| |||||| ||||| ||||||
Sbjct: 11  actacatacggatgtatatagacatactgtagagtgtacaatcactcgttttgctccgta 70

              
Query: 123 tgt 125
           |||
Sbjct: 71  tgt 73




>44826_miR1439:micropc
          Length = 172

 Score = 52.0 bits (26), Expect = 2e-07
 Identities = 32/34 (94%)
 Strand = Plus / Minus

                                             
Query: 144 ctaaaatgtcttatattttgaaacggagggagta 177
           ||||||| |||||||||||||||||| |||||||
Sbjct: 34  ctaaaatatcttatattttgaaacggggggagta 1




>46836_miR1439:micropc
          Length = 86

 Score = 44.1 bits (22), Expect = 4e-05
 Identities = 25/26 (96%)
 Strand = Plus / Minus

                                     
Query: 152 tcttatattttgaaacggagggagta 177
           ||||||||||||| ||||||||||||
Sbjct: 26  tcttatattttgagacggagggagta 1




>44799_miR1126:micropc
          Length = 86

 Score = 44.1 bits (22), Expect = 4e-05
 Identities = 37/42 (88%)
 Strand = Plus / Minus

                                                     
Query: 88  attttagagtgtacattcactcattttgttccgtatgtagtc 129
           ||||||||||||| ||||| | |||||| |||||| ||||||
Sbjct: 51  attttagagtgtagattcatttattttgctccgtaagtagtc 10