miRNEST 2.0, an integrative microRNA resource :: BLAST
BLASTN 2.2.20 [Feb-08-2009]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
>RF00906;MIR1122;EU545231.1/2974-3138 112509:Hordeum vulgare subsp.
vulgare (domesticated barley)
Length = 165
Score = 168 bits (85), Expect = 2e-41
Identities = 145/165 (87%)
Strand = Plus / Plus
Query: 14 tactcccgccgttcctaaatataagtcttttaaaatatttcactaagagtctacatacga 73
||||||| ||||||||||||||||||||||||| ||||||||| |||||||||||
Sbjct: 1 tactccctccgttcctaaatataagtcttttaagcgatttcactagatgtctacatacgg 60
Query: 74 agtaaaatgagtgaacctacactctaaaaaatgtctatatacatccgtatgtagtctact 133
|| ||||||| |||| ||||||||||| |||||||||||||||||||||||||| | |
Sbjct: 61 agcaaaatgattgaatgtacactctaaagtatgtctatatacatccgtatgtagtccatt 120
Query: 134 aatgaaatctctttaaagacttgtatttaggaacggagggagtag 178
| |||||||||| |||||||| ||||||||||||||||||||||
Sbjct: 121 agtgaaatctctacaaagacttatatttaggaacggagggagtag 165
Score = 65.9 bits (33), Expect = 2e-10
Identities = 54/61 (88%)
Strand = Plus / Minus
Query: 117 tccgtatgtagtctactaatgaaatctctttaaagacttgtatttaggaacggagggagt 176
||||||||||| | ||| ||||||| ||| |||||||| ||||||||||||||||||||
Sbjct: 61 tccgtatgtagacatctagtgaaatcgcttaaaagacttatatttaggaacggagggagt 2
Query: 177 a 177
|
Sbjct: 1 a 1
Score = 54.0 bits (27), Expect = 7e-07
Identities = 51/59 (86%)
Strand = Plus / Minus
Query: 14 tactcccgccgttcctaaatataagtcttttaaaatatttcactaagagtctacatacg 72
||||||| |||||||||||||||||||||| | | |||||||||| | |||||||||
Sbjct: 164 tactccctccgttcctaaatataagtctttgtagagatttcactaatggactacatacg 106
>RF00906;MIR1122;AF521177.1/76812-76977 4513:Hordeum vulgare
Length = 166
Score = 159 bits (80), Expect = 2e-38
Identities = 143/164 (87%)
Strand = Plus / Minus
Query: 14 tactcccgccgttcctaaatataagtcttttaaaatatttcactaagagtctacatacga 73
||||||| ||||||||||||||||||||||| | | ||||| ||| | |||||||||
Sbjct: 164 tactccctccgttcctaaatataagtctttttagagatttcgctagacgactacatacgg 105
Query: 74 agtaaaatgagtgaacctacactctaaaaaatgtctatatacatccgtatgtagtctact 133
|| |||||||||||| ||| | ||||||| ||||||||||||||||| ||||||||||||
Sbjct: 104 agcaaaatgagtgaatctatattctaaaatatgtctatatacatccgaatgtagtctact 45
Query: 134 aatgaaatctctttaaagacttgtatttaggaacggagggagta 177
| ||||| |||| |||||||| |||||||||||||||||||||
Sbjct: 44 agtgaaacctctaaaaagacttatatttaggaacggagggagta 1
Score = 67.9 bits (34), Expect = 5e-11
Identities = 55/62 (88%)
Strand = Plus / Plus
Query: 117 tccgtatgtagtctactaatgaaatctctttaaagacttgtatttaggaacggagggagt 176
||||||||||||| ||| ||||||||| |||||||| ||||||||||||||||||||
Sbjct: 104 tccgtatgtagtcgtctagcgaaatctctaaaaagacttatatttaggaacggagggagt 163
Query: 177 ag 178
||
Sbjct: 164 ag 165
Score = 54.0 bits (27), Expect = 7e-07
Identities = 30/31 (96%)
Strand = Plus / Plus
Query: 14 tactcccgccgttcctaaatataagtctttt 44
||||||| |||||||||||||||||||||||
Sbjct: 1 tactccctccgttcctaaatataagtctttt 31
>RF00906;MIR1122;AY821693.1/1381-1215 58935:Australopyrum velutinum
Length = 167
Score = 121 bits (61), Expect = 4e-27
Identities = 141/165 (85%), Gaps = 2/165 (1%)
Strand = Plus / Plus
Query: 13 gtactcccgccgttcctaaatataagtcttttaaaatatttcactaagagtctacatacg 72
|||||||| | ||||||||||||||||||||| | | ||| | || | | |||||||||
Sbjct: 4 gtactccctctgttcctaaatataagtctttttagagattctaatatg-gactacatacg 62
Query: 73 aagtaaaatgagtgaacctacactctaaaaaatgtctatatacatccgtatgtagtctac 132
|| |||||||||||| ||||||||||||| | |||||||| ||||||||||||||| |
Sbjct: 63 gagcaaaatgagtgaatctacactctaaaatacgtctatattcatccgtatgtagtcca- 121
Query: 133 taatgaaatctctttaaagacttgtatttaggaacggagggagta 177
|| | |||||||| |||||||| |||||||||||||||||||||
Sbjct: 122 tattcaaatctctaaaaagacttatatttaggaacggagggagta 166
Score = 54.0 bits (27), Expect = 7e-07
Identities = 30/31 (96%)
Strand = Plus / Minus
Query: 14 tactcccgccgttcctaaatataagtctttt 44
||||||| |||||||||||||||||||||||
Sbjct: 166 tactccctccgttcctaaatataagtctttt 136
Score = 46.1 bits (23), Expect = 2e-04
Identities = 35/39 (89%)
Strand = Plus / Minus
Query: 139 aatctctttaaagacttgtatttaggaacggagggagta 177
||||||| |||||||| ||||||||||| |||||||||
Sbjct: 43 aatctctaaaaagacttatatttaggaacagagggagta 5
>RF00906;MIR1122;EU812563.1/51726-51572 112509:Hordeum vulgare
subsp. vulgare (domesticated barley)
Length = 155
Score = 119 bits (60), Expect = 1e-26
Identities = 135/164 (82%), Gaps = 17/164 (10%)
Strand = Plus / Minus
Query: 14 tactcccgccgttcctaaatataagtcttttaaaatatttcactaagagtctacatacga 73
||||||| ||||||||||||||||||||||||| ||||||||||| ||||||||||||
Sbjct: 151 tactccctccgttcctaaatataagtcttttaagatatttcactagtagtctacatacgg 92
Query: 74 agtaaaatgagtgaacctacactctaaaaaatgtctatatacatccgtatgtagtctact 133
|| ||||||||| | ||||||||||||||||||| ||||| |||
Sbjct: 91 agcaaaatgagtta-----------------tgtctatatacatccgtatatagtccact 49
Query: 134 aatgaaatctctttaaagacttgtatttaggaacggagggagta 177
||||||| ||||||||||||| |||||||||||||||||||||
Sbjct: 48 aatgaaacttctttaaagacttatatttaggaacggagggagta 5
Score = 81.8 bits (41), Expect = 3e-15
Identities = 56/61 (91%)
Strand = Plus / Plus
Query: 117 tccgtatgtagtctactaatgaaatctctttaaagacttgtatttaggaacggagggagt 176
||||||||||| |||||| |||||| |||| |||||||| ||||||||||||||||||||
Sbjct: 91 tccgtatgtagactactagtgaaatatcttaaaagacttatatttaggaacggagggagt 150
Query: 177 a 177
|
Sbjct: 151 a 151
Score = 52.0 bits (26), Expect = 3e-06
Identities = 29/30 (96%)
Strand = Plus / Plus
Query: 14 tactcccgccgttcctaaatataagtcttt 43
||||||| ||||||||||||||||||||||
Sbjct: 5 tactccctccgttcctaaatataagtcttt 34
>RF00906;MIR1122;FJ548567.1/3141-3305 4513:Hordeum vulgare
Length = 165
Score = 119 bits (60), Expect = 1e-26
Identities = 139/164 (84%), Gaps = 1/164 (0%)
Strand = Plus / Plus
Query: 14 tactcccgccgttcctaaatataagtcttttaaaatatttcactaagagtctacatacga 73
||||||| |||||||||||| |||||||||| | | ||||| ||||| | ||||||| |
Sbjct: 3 tactccctccgttcctaaatgtaagtctttttagagatttctctaaggggctacatatgg 62
Query: 74 agtaaaatgagtgaacctacactctaaaaaatgtctatatacatccgtatgtagtctact 133
|| |||||||||||| || ||||||| | ||||||||||||||||||||||||| ||
Sbjct: 63 agcaaaatgagtgaatctgtactctaagta-tgtctatatacatccgtatgtagtcccct 121
Query: 134 aatgaaatctctttaaagacttgtatttaggaacggagggagta 177
| ||||| ||| |||||||| |||||||||||||||||||||
Sbjct: 122 agtgaaacttctaaaaagacttatatttaggaacggagggagta 165
Score = 54.0 bits (27), Expect = 7e-07
Identities = 30/31 (96%)
Strand = Plus / Minus
Query: 14 tactcccgccgttcctaaatataagtctttt 44
||||||| |||||||||||||||||||||||
Sbjct: 165 tactccctccgttcctaaatataagtctttt 135
Score = 50.1 bits (25), Expect = 1e-05
Identities = 37/41 (90%)
Strand = Plus / Minus
Query: 137 gaaatctctttaaagacttgtatttaggaacggagggagta 177
||||||||| |||||||| ||||||||||||||||||||
Sbjct: 43 gaaatctctaaaaagacttacatttaggaacggagggagta 3
>RF00906;MIR1122;AF427791.1/1754-1590 4513:Hordeum vulgare
Length = 165
Score = 119 bits (60), Expect = 1e-26
Identities = 139/164 (84%), Gaps = 1/164 (0%)
Strand = Plus / Minus
Query: 14 tactcccgccgttcctaaatataagtcttttaaaatatttcactaagagtctacatacga 73
||||||| ||||||| ||||||||| | ||| | |||||||||| ||| |||||||||
Sbjct: 163 tactccctccgttccaaaatataagaccttttaggtatttcactaggagactacatacgg 104
Query: 74 agtaaaatgagtgaacctacactctaaaaaatgtctatatacatccgtatgtagtctact 133
|| |||||||||||| ||| ||||||||| |||||||| |||||||||||||||| || |
Sbjct: 103 agcaaaatgagtgaatctatactctaaaatatgtctatgtacatccgtatgtagttta-t 45
Query: 134 aatgaaatctctttaaagacttgtatttaggaacggagggagta 177
| | ||||||| || | ||| |||||||||||||||||||||
Sbjct: 44 agtacaatctctaaaaggtcttatatttaggaacggagggagta 1
>RF00906;MIR1122;AJ400714.1/2947-2781 4565:Triticum aestivum (bread
wheat)
Length = 167
Score = 111 bits (56), Expect = 4e-24
Identities = 139/164 (84%), Gaps = 2/164 (1%)
Strand = Plus / Plus
Query: 14 tactcccgccgttcctaaatataagtcttttaaaatatttcactaagagtctacatacga 73
||||||| |||||||||||||||||||||| | | |||||| || | | | |||||||
Sbjct: 2 tactccctccgttcctaaatataagtctttggacagatttcattatg-gaccacatacgg 60
Query: 74 agtaaaatgagtgaacctacactctaaaaaatgtctatatacatccgtatgtagtctact 133
||||||||||||||||||| ||||||||| |||| |||||||||||||| ||| | |
Sbjct: 61 agtaaaatgagtgaacctatactctaaaatgcatctacatacatccgtatgtggtcca-t 119
Query: 134 aatgaaatctctttaaagacttgtatttaggaacggagggagta 177
| |||||||||| |||||||| |||||||||| ||||||||||
Sbjct: 120 agtgaaatctctacaaagacttatatttaggaatggagggagta 163
Score = 58.0 bits (29), Expect = 5e-08
Identities = 41/45 (91%)
Strand = Plus / Minus
Query: 133 taatgaaatctctttaaagacttgtatttaggaacggagggagta 177
||||||||||| | |||||||| |||||||||||||||||||||
Sbjct: 46 taatgaaatctgtccaaagacttatatttaggaacggagggagta 2
Score = 48.1 bits (24), Expect = 4e-05
Identities = 30/32 (93%)
Strand = Plus / Minus
Query: 12 tgtactcccgccgttcctaaatataagtcttt 43
||||||||| || |||||||||||||||||||
Sbjct: 165 tgtactccctccattcctaaatataagtcttt 134
>RF00906;MIR1122;DQ352178.1/5805-5640 112509:Hordeum vulgare subsp.
vulgare (domesticated barley)
Length = 166
Score = 107 bits (54), Expect = 6e-23
Identities = 139/166 (83%), Gaps = 1/166 (0%)
Strand = Plus / Minus
Query: 14 tactcccgccgttcctaaatataagtcttttaaaatatttcactaagagtctacatacga 73
||||||| ||||||| ||||||||| | ||| | |||||||||| || |||||||||
Sbjct: 166 tactccctccgttccaaaatataagaccttttaggtatttcactagaagactacatacgg 107
Query: 74 agtaaaatgagtgaacctacactctaaaaaatgtctatatacatccgtatgtagtctact 133
|| |||||||| ||| ||| ||||||||| |||||||| |||||||||||||||| || |
Sbjct: 106 agcaaaatgagcgaatctatactctaaaatatgtctatgtacatccgtatgtagttta-t 48
Query: 134 aatgaaatctctttaaagacttgtatttaggaacggagggagtagt 179
| | ||||||| || | ||| |||||||||||||||||||||||
Sbjct: 47 agtacaatctctaaaaggtcttatatttaggaacggagggagtagt 2
>RF00906;MIR1122;AF338431.1/8563-8727 37682:Aegilops tauschii
Length = 165
Score = 93.7 bits (47), Expect = 8e-19
Identities = 139/167 (83%), Gaps = 7/167 (4%)
Strand = Plus / Minus
Query: 11 atgtactcccgccgttcctaaatataagtcttttaaaatatttcactaagagtctacata 70
|||||||||| |||||||||||||||||||| | | | ||||||||| | | |||||||
Sbjct: 164 atgtactccctccgttcctaaatataagtctctgtagagatttcactatg-gactacata 106
Query: 71 cgaagtaaaatgagtgaacctacactctaaaaaatgtctatatacatccgtatgtagtct 130
||||| |||||||||||| ||||||||||||| ||||||||| ||||| |||
Sbjct: 105 cgaagcaaaatgagtgaatctacactctaaaatgcatctatatac-----tatgtggtcc 51
Query: 131 actaatgaaatctctttaaagacttgtatttaggaacggagggagta 177
| || || ||||||| |||||||| |||||||||||||||||||||
Sbjct: 50 a-tagtggaatctctacaaagacttatatttaggaacggagggagta 5
Score = 54.0 bits (27), Expect = 7e-07
Identities = 52/59 (88%), Gaps = 1/59 (1%)
Strand = Plus / Plus
Query: 119 cgtatgtagtctactaatgaaatctctttaaagacttgtatttaggaacggagggagta 177
||||||||||| | || |||||||||| | |||||| |||||||||||||||||||||
Sbjct: 104 cgtatgtagtcca-tagtgaaatctctacagagacttatatttaggaacggagggagta 161
Score = 52.0 bits (26), Expect = 3e-06
Identities = 29/30 (96%)
Strand = Plus / Plus
Query: 14 tactcccgccgttcctaaatataagtcttt 43
||||||| ||||||||||||||||||||||
Sbjct: 5 tactccctccgttcctaaatataagtcttt 34
>RF00906;MIR1122;DQ871219.1/152084-152250 85692:Triticum turgidum
subsp. dicoccoides
Length = 167
Score = 89.7 bits (45), Expect = 1e-17
Identities = 139/166 (83%), Gaps = 7/166 (4%)
Strand = Plus / Plus
Query: 14 tactcccgccgttcctaaatataagtcttttaaaatatttcactaagagtctacatacga 73
||||||| |||||||||||||||||||||| | | ||||||||| || | |||||||
Sbjct: 5 tactccctccgttcctaaatataagtctttggagagatttcactat-agaccacatacgg 63
Query: 74 agtaaaatgagtgaacctacactctaaaaaatg--tctatatacatccgtatgtagtcta 131
|| |||||||||||| |||||| | |||||| ||||||||||||||||||| ||| |
Sbjct: 64 agaaaaatgagtgaatctacac---ataaaatgcatctatatacatccgtatgtggtcca 120
Query: 132 ctaatgaaatctctttaaagacttgtatttaggaacggagggagta 177
| | |||||| ||| ||||||| |||||||||||||||||||||
Sbjct: 121 c-agtgaaatatctacgaagacttatatttaggaacggagggagta 165
Score = 71.9 bits (36), Expect = 3e-12
Identities = 58/64 (90%), Gaps = 1/64 (1%)
Strand = Plus / Minus
Query: 117 tccgtatgtagtctactaatgaaatctctttaaagacttgtatttaggaacggagggagt 176
||||||||| ||||| || |||||||||| |||||||| ||||||||||||||||||||
Sbjct: 64 tccgtatgtggtcta-tagtgaaatctctccaaagacttatatttaggaacggagggagt 6
Query: 177 agta 180
||||
Sbjct: 5 agta 2
Score = 52.0 bits (26), Expect = 3e-06
Identities = 29/30 (96%)
Strand = Plus / Minus
Query: 13 gtactcccgccgttcctaaatataagtctt 42
|||||||| |||||||||||||||||||||
Sbjct: 166 gtactccctccgttcctaaatataagtctt 137
>RF00906;MIR1122;AY013246.1/66605-66771 112509:Hordeum vulgare
subsp. vulgare (domesticated barley)
Length = 167
Score = 89.7 bits (45), Expect = 1e-17
Identities = 137/165 (83%), Gaps = 2/165 (1%)
Strand = Plus / Minus
Query: 14 tactcccgccgttcctaaatataagtcttttaaaatatttcactaagagtctacatacga 73
||||||| ||||||||||||||||| | ||| | | ||||||||| || |||||||||
Sbjct: 163 tactccctccgttcctaaatataagaccttttacaaatttcactat-agactacatacgg 105
Query: 74 agtaaaatgagtgaacctacactctaaaaaatgtctatatacatccgtatgtagtctact 133
|| |||||||||||| |||| | |||| ||| ||| ||||||||||||||||| || |
Sbjct: 104 agcaaaatgagtgaatttacatcccaaaatatgactacatacatccgtatgtagttta-t 46
Query: 134 aatgaaatctctttaaagacttgtatttaggaacggagggagtag 178
| ||| |||||| || | ||| ||||||||||||||||||||||
Sbjct: 45 agtgagatctctaaaaggtcttatatttaggaacggagggagtag 1
Score = 48.1 bits (24), Expect = 4e-05
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 157 tatttaggaacggagggagtagta 180
||||||||||||||||||||||||
Sbjct: 143 tatttaggaacggagggagtagta 166
>RF00906;MIR1122;AK248896.1/138-279 112509:Hordeum vulgare subsp.
vulgare (domesticated barley)
Length = 142
Score = 71.9 bits (36), Expect = 3e-12
Identities = 60/68 (88%)
Strand = Plus / Plus
Query: 14 tactcccgccgttcctaaatataagtcttttaaaatatttcactaagagtctacatacga 73
||||||| |||| | |||||||||||||||||| ||||||||||| | |||||||||||
Sbjct: 5 tactccctccgtacttaaatataagtcttttaagatatttcactaggtgtctacatacgg 64
Query: 74 agtaaaat 81
|| |||||
Sbjct: 65 agcaaaat 72
Score = 52.0 bits (26), Expect = 3e-06
Identities = 29/30 (96%)
Strand = Plus / Minus
Query: 14 tactcccgccgttcctaaatataagtcttt 43
||||||| ||||||||||||||||||||||
Sbjct: 138 tactccctccgttcctaaatataagtcttt 109
Score = 52.0 bits (26), Expect = 3e-06
Identities = 29/30 (96%)
Strand = Plus / Plus
Query: 148 aaagacttgtatttaggaacggagggagta 177
|||||||| |||||||||||||||||||||
Sbjct: 109 aaagacttatatttaggaacggagggagta 138
Score = 50.1 bits (25), Expect = 1e-05
Identities = 52/61 (85%)
Strand = Plus / Minus
Query: 117 tccgtatgtagtctactaatgaaatctctttaaagacttgtatttaggaacggagggagt 176
||||||||||| | ||| |||||| |||| |||||||| |||||| | |||||||||||
Sbjct: 65 tccgtatgtagacacctagtgaaatatcttaaaagacttatatttaagtacggagggagt 6
Query: 177 a 177
|
Sbjct: 5 a 5
>RF00906;MIR1122;AK252971.1/1469-1351 112509:Hordeum vulgare
subsp. vulgare (domesticated barley)
Length = 119
Score = 61.9 bits (31), Expect = 3e-09
Identities = 65/75 (86%), Gaps = 1/75 (1%)
Strand = Plus / Plus
Query: 14 tactcccgccgttcctaaatataagtcttttaaaatatttcactaagagtctacatacga 73
||||||| ||||||||||||||||||||||| | | ||| ||||| | | |||||||||
Sbjct: 5 tactccctccgttcctaaatataagtctttttagagattacactatg-gactacatacgg 63
Query: 74 agtaaaatgagtgaa 88
|| ||||||||||||
Sbjct: 64 agcaaaatgagtgaa 78
Score = 58.0 bits (29), Expect = 5e-08
Identities = 54/61 (88%), Gaps = 1/61 (1%)
Strand = Plus / Minus
Query: 117 tccgtatgtagtctactaatgaaatctctttaaagacttgtatttaggaacggagggagt 176
||||||||||||| | || || ||||||| |||||||| ||||||||||||||||||||
Sbjct: 64 tccgtatgtagtcca-tagtgtaatctctaaaaagacttatatttaggaacggagggagt 6
Query: 177 a 177
|
Sbjct: 5 a 5
Score = 44.1 bits (22), Expect = 7e-04
Identities = 28/30 (93%)
Strand = Plus / Minus
Query: 11 atgtactcccgccgttcctaaatataagtc 40
|||||| ||| |||||||||||||||||||
Sbjct: 118 atgtaccccctccgttcctaaatataagtc 89
>RF00906;MIR1122;FM164415.1/16902-16796 4513:Hordeum vulgare
Length = 107
Score = 61.9 bits (31), Expect = 3e-09
Identities = 65/75 (86%), Gaps = 1/75 (1%)
Strand = Plus / Plus
Query: 14 tactcccgccgttcctaaatataagtcttttaaaatatttcactaagagtctacatacga 73
||||||| || ||||||||||||||||||| ||| ||||||||| | | ||||||||||
Sbjct: 5 tactccctcctttcctaaatataagtctttctaaagatttcactacg-gactacatacga 63
Query: 74 agtaaaatgagtgaa 88
||| |||||| ||||
Sbjct: 64 agtgaaatgaatgaa 78
>RF00906;MIR1122;AY853252.1/232318-232152 4513:Hordeum vulgare
Length = 167
Score = 60.0 bits (30), Expect = 1e-08
Identities = 39/42 (92%)
Strand = Plus / Plus
Query: 87 aacctacactctaaaaaatgtctatatacatccgtatgtagt 128
|||||| || |||||| |||||||||||||||||||||||||
Sbjct: 77 aacctataccctaaaatatgtctatatacatccgtatgtagt 118
Score = 46.1 bits (23), Expect = 2e-04
Identities = 23/23 (100%)
Strand = Plus / Minus
Query: 157 tatttaggaacggagggagtagt 179
|||||||||||||||||||||||
Sbjct: 25 tatttaggaacggagggagtagt 3
>RF00906;MIR1122;EU730896.1/84586-84679 15368:Brachypodium
distachyon
Length = 94
Score = 46.1 bits (23), Expect = 2e-04
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 156 gtatttaggaacggagggagtag 178
|||||||||||||||||||||||
Sbjct: 69 gtatttaggaacggagggagtag 91
>RF00906;MIR1122;DQ537335.1/79725-79622 4565:Triticum aestivum
(bread wheat)
Length = 104
Score = 44.1 bits (22), Expect = 7e-04
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 156 gtatttaggaacggagggagta 177
||||||||||||||||||||||
Sbjct: 79 gtatttaggaacggagggagta 100
>RF00906;MIR1122;EU282260.1/1308-1219 97361:Hordeum murinum
Length = 90
Score = 44.1 bits (22), Expect = 7e-04
Identities = 25/26 (96%)
Strand = Plus / Minus
Query: 156 gtatttaggaacggagggagtagtag 181
|||||||||||| |||||||||||||
Sbjct: 26 gtatttaggaacagagggagtagtag 1
>RF00906;MIR1122;EU730901.1/155966-155873 15368:Brachypodium
distachyon
Length = 94
Score = 44.1 bits (22), Expect = 7e-04
Identities = 22/22 (100%)
Strand = Plus / Minus
Query: 156 gtatttaggaacggagggagta 177
||||||||||||||||||||||
Sbjct: 26 gtatttaggaacggagggagta 5
>RF00906;MIR1122;EU730899.1/47735-47828 15368:Brachypodium
distachyon
Length = 94
Score = 44.1 bits (22), Expect = 7e-04
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 156 gtatttaggaacggagggagta 177
||||||||||||||||||||||
Sbjct: 69 gtatttaggaacggagggagta 90
>RF00906;MIR1122;AP008214.1/20360044-20360123 39947:Oryza sativa
Japonica Group
Length = 80
Score = 44.1 bits (22), Expect = 7e-04
Identities = 25/26 (96%)
Strand = Plus / Minus
Query: 13 gtactcccgccgttcctaaatataag 38
|||||||| |||||||||||||||||
Sbjct: 77 gtactccctccgttcctaaatataag 52
>RF00906;MIR1122;AACV01003934.1/29289-29133 39947:Oryza sativa
Japonica Group
Length = 157
Score = 44.1 bits (22), Expect = 7e-04
Identities = 22/22 (100%)
Strand = Plus / Minus
Query: 157 tatttaggaacggagggagtag 178
||||||||||||||||||||||
Sbjct: 25 tatttaggaacggagggagtag 4
