miRNEST 2.0, an integrative microRNA resource :: BLAST
BLASTN 2.2.20 [Feb-08-2009]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
>RF00906;MIR1122;AK249560.1/988-1092 112509:Hordeum vulgare subsp.
vulgare (domesticated barley)
Length = 105
Score = 91.7 bits (46), Expect = 2e-18
Identities = 76/86 (88%)
Strand = Plus / Minus
Query: 12 tactccctccgtccaaaaataactgtatcaagcttaaaacaattttatactaaagctagc 71
|||||||||||||| ||||||||||| |||| ||||| |||| ||| ||||| ||||||
Sbjct: 101 tactccctccgtcccaaaataactgtctcaaacttaatacaagtttgtactatagctagt 42
Query: 72 acaaagttgacacacttattttggga 97
| |||||||| |||||||||||||||
Sbjct: 41 ataaagttgagacacttattttggga 16
>RF00906;MIR1122;EU282755.1/953-849 112509:Hordeum vulgare subsp.
vulgare (domesticated barley)
Length = 105
Score = 89.7 bits (45), Expect = 8e-18
Identities = 84/97 (86%)
Strand = Plus / Plus
Query: 12 tactccctccgtccaaaaataactgtatcaagcttaaaacaattttatactaaagctagc 71
|||||||||||||| ||||||| ||| ||||||||| |||||| ||||| ||||||
Sbjct: 5 tactccctccgtcccaaaataagtgtctcaagcttagtgtaattttgtactacagctagt 64
Query: 72 acaaagttgacacacttattttgggatgaagggagta 108
|||||||||| ||||||||||||||| | ||||||||
Sbjct: 65 acaaagttgagacacttattttgggacggagggagta 101
>RF00906;MIR1122;EU282239.1/1196-1300 52152:Elymus repens
Length = 105
Score = 89.7 bits (45), Expect = 8e-18
Identities = 87/101 (86%)
Strand = Plus / Plus
Query: 11 atactccctccgtccaaaaataactgtatcaagcttaaaacaattttatactaaagctag 70
||||||||||||||| ||||||| ||| ||||||||| |||| ||| |||||||| ||
Sbjct: 4 atactccctccgtcccaaaataagtgtctcaagcttagtacaactttgtactaaagttaa 63
Query: 71 cacaaagttgacacacttattttgggatgaagggagtagta 111
|||||||||| ||| ||||||||||| | |||||||||||
Sbjct: 64 tacaaagttgagacatttattttgggacggagggagtagta 104
>RF00906;MIR1122;AF474373.1/50497-50394 112509:Hordeum vulgare
subsp. vulgare (domesticated barley)
Length = 104
Score = 87.7 bits (44), Expect = 3e-17
Identities = 90/104 (86%), Gaps = 1/104 (0%)
Strand = Plus / Plus
Query: 9 aaatactccctccgtccaaaaataactgtatcaagcttaaaacaattttatactaaagct 68
|||||||| |||||||| ||||||||||| |||||| || |||| ||| ||||| | ||
Sbjct: 2 aaatactcactccgtcccaaaataactgtctcaagcctagtacaactttgtactagaact 61
Query: 69 agcacaaagttgacacacttattttgggatgaagggagtagtac 112
|| |||||||||| ||||||||||||||| | ||||||||||||
Sbjct: 62 agtacaaagttgagacacttattttggga-ggagggagtagtac 104
>RF00906;MIR1122;FJ184990.1/3303-3406 4565:Triticum aestivum (bread
wheat)
Length = 104
Score = 83.8 bits (42), Expect = 5e-16
Identities = 85/98 (86%), Gaps = 1/98 (1%)
Strand = Plus / Plus
Query: 11 atactccctccgtccaaaaataactgtatcaagcttaaaacaattttatactaaagctag 70
||||||||||||||| ||||||| ||| |||| |||| |||||||||||||| || |||
Sbjct: 4 atactccctccgtcccaaaataagtgtctcaaccttagtacaattttatactagagttag 63
Query: 71 cacaaagttgacacacttattttgggatgaagggagta 108
|||||| ||| ||||||||||||||| | ||||||||
Sbjct: 64 tacaaag-tgagacacttattttgggacggagggagta 100
>RF00906;MIR1122;DQ871219.1/106890-106994 85692:Triticum turgidum
subsp. dicoccoides
Length = 105
Score = 81.8 bits (41), Expect = 2e-15
Identities = 86/101 (85%)
Strand = Plus / Plus
Query: 8 caaatactccctccgtccaaaaataactgtatcaagcttaaaacaattttatactaaagc 67
|||||||||||||||||| ||||||| ||| | |||||| | || ||| ||||| ||
Sbjct: 1 caaatactccctccgtcccaaaataagtgtcttgagcttagtaaaaatttgtactagaga 60
Query: 68 tagcacaaagttgacacacttattttgggatgaagggagta 108
||| |||||||||| ||||||||||||||||| ||||||||
Sbjct: 61 tagtacaaagttgagacacttattttgggatggagggagta 101
>RF00906;MIR1122;EU282250.1/1190-1294 52152:Elymus repens
Length = 105
Score = 81.8 bits (41), Expect = 2e-15
Identities = 86/101 (85%)
Strand = Plus / Plus
Query: 11 atactccctccgtccaaaaataactgtatcaagcttaaaacaattttatactaaagctag 70
||||||||||||||| ||||||| ||| ||||||||| |||| || |||||||| ||
Sbjct: 4 atactccctccgtcccaaaataagtgtctcaagcttagtacaaccttgtactaaagttaa 63
Query: 71 cacaaagttgacacacttattttgggatgaagggagtagta 111
|||||||||| ||| ||||||||||| | |||||||||||
Sbjct: 64 tacaaagttgagacatttattttgggacggagggagtagta 104
>RF00906;MIR1122;DQ445236.1/13423-13319 112509:Hordeum vulgare
subsp. vulgare (domesticated barley)
Length = 105
Score = 79.8 bits (40), Expect = 7e-15
Identities = 85/100 (85%)
Strand = Plus / Minus
Query: 9 aaatactccctccgtccaaaaataactgtatcaagcttaaaacaattttatactaaagct 68
||||||||||||||| | ||||||||| | ||||||||| |||| ||| ||||| ||||
Sbjct: 104 aaatactccctccgttccaaaataactatctcaagcttagtacaactttgtactagagct 45
Query: 69 agcacaaagttgacacacttattttgggatgaagggagta 108
|| ||||| |||| ||||||||||||| | | ||||||||
Sbjct: 44 agtacaaatttgagacacttattttggaacggagggagta 5
>RF00906;MIR1122;DQ995510.1/1615-1718 4513:Hordeum vulgare
Length = 104
Score = 77.8 bits (39), Expect = 3e-14
Identities = 85/99 (85%), Gaps = 1/99 (1%)
Strand = Plus / Plus
Query: 10 aatactccctccgtccaaaaataactgtatcaagcttaaaacaattttatactaaagcta 69
||||||||||||||| ||||||||||| |||| ||| |||| ||| ||||| |||||
Sbjct: 3 aatactccctccgtctcaaaataactgtctcaa-ctttgtacaactttgtactagagcta 61
Query: 70 gcacaaagttgacacacttattttgggatgaagggagta 108
| |||||||||| ||| ||||||||||||| ||||||||
Sbjct: 62 gtacaaagttgagacagttattttgggatggagggagta 100
>RF00906;MIR1122;AY663392.1/117099-117203 4565:Triticum aestivum
(bread wheat)
Length = 105
Score = 75.8 bits (38), Expect = 1e-13
Identities = 83/98 (84%)
Strand = Plus / Plus
Query: 11 atactccctccgtccaaaaataactgtatcaagcttaaaacaattttatactaaagctag 70
||||||| ||||| | ||||||| ||| |||| |||| | || |||||||||||||||
Sbjct: 4 atactccttccgttctaaaataagtgtctcaatcttagtataactttatactaaagctaa 63
Query: 71 cacaaagttgacacacttattttgggatgaagggagta 108
||||| || ||||||||||||||||||| ||||||||
Sbjct: 64 tacaaaattaacacacttattttgggatggagggagta 101
>RF00906;MIR1122;AY943294.1/62260-62364 112509:Hordeum vulgare
subsp. vulgare (domesticated barley)
Length = 105
Score = 75.8 bits (38), Expect = 1e-13
Identities = 74/86 (86%)
Strand = Plus / Plus
Query: 12 tactccctccgtccaaaaataactgtatcaagcttaaaacaattttatactaaagctagc 71
|||||||||||| | ||||||| ||| | |||||||| |||||||| ||||||| |||
Sbjct: 5 tactccctccgttccaaaataagtgtcttaagcttaatacaattttgtactaaatctaat 64
Query: 72 acaaagttgacacacttattttggga 97
|||||||||| ||| |||||||||||
Sbjct: 65 acaaagttgagacagttattttggga 90
>RF00906;MIR1122;X83518.1/7301-7197 4513:Hordeum vulgare
Length = 105
Score = 73.8 bits (37), Expect = 5e-13
Identities = 73/85 (85%)
Strand = Plus / Plus
Query: 11 atactccctccgtccaaaaataactgtatcaagcttaaaacaattttatactaaagctag 70
||||||||||| || ||||||||||| ||||||||| |||| ||| || || ||||||
Sbjct: 4 atactccctccatctcaaaataactgtctcaagcttagtacaactttgtagtagagctag 63
Query: 71 cacaaagttgacacacttattttgg 95
|||||||||| |||||||||||||
Sbjct: 64 tacaaagttgagacacttattttgg 88
>RF00906;MIR1122;EU593539.1/914-1018 4513:Hordeum vulgare
Length = 105
Score = 73.8 bits (37), Expect = 5e-13
Identities = 82/97 (84%)
Strand = Plus / Plus
Query: 12 tactccctccgtccaaaaataactgtatcaagcttaaaacaattttatactaaagctagc 71
|||||||||||||| ||||||||||| | ||||||| | || ||||||||| | ||||
Sbjct: 5 tactccctccgtcccaaaataactgtcttaagcttagtataaatttatactagatctagt 64
Query: 72 acaaagttgacacacttattttgggatgaagggagta 108
| |||||||| ||| ||||||||||| | ||||||||
Sbjct: 65 ataaagttgagacagttattttgggacggagggagta 101
Score = 52.0 bits (26), Expect = 2e-06
Identities = 32/34 (94%)
Strand = Plus / Minus
Query: 9 aaatactccctccgtccaaaaataactgtatcaa 42
||||||||||||||||| ||||||||||| ||||
Sbjct: 104 aaatactccctccgtcccaaaataactgtctcaa 71
>RF00906;MIR1122;FJ236275.1/674-570 4573:Aegilops speltoides
Length = 105
Score = 73.8 bits (37), Expect = 5e-13
Identities = 82/97 (84%)
Strand = Plus / Plus
Query: 12 tactccctccgtccaaaaataactgtatcaagcttaaaacaattttatactaaagctagc 71
||||||||||||| ||||||| ||| |||||| || |||| ||| |||||||| |||
Sbjct: 5 tactccctccgtctcaaaataagtgtctcaagcctagtacaactttgtactaaagttagt 64
Query: 72 acaaagttgacacacttattttgggatgaagggagta 108
|||||||| | ||||||||||||||| | ||||||||
Sbjct: 65 acaaagttaagacacttattttgggacggagggagta 101
>RF00906;MIR1122;EU282771.1/632-528 112509:Hordeum vulgare subsp.
vulgare (domesticated barley)
Length = 105
Score = 71.9 bits (36), Expect = 2e-12
Identities = 84/100 (84%)
Strand = Plus / Plus
Query: 12 tactccctccgtccaaaaataactgtatcaagcttaaaacaattttatactaaagctagc 71
|||||||||||||| ||||||||| | |||| |||| |||| ||||||||| ||||||
Sbjct: 5 tactccctccgtcccaaaataactttctcaaacttagtacaactttatactagagctagt 64
Query: 72 acaaagttgacacacttattttgggatgaagggagtagta 111
|||||||| | |||||||||| || | |||||||||||
Sbjct: 65 gtaaagttgagatacttattttgagacggagggagtagta 104
>RF00906;MIR1122;AY821694.1/1308-1197 37674:Crithopsis delileana
Length = 112
Score = 69.9 bits (35), Expect = 7e-12
Identities = 53/59 (89%)
Strand = Plus / Plus
Query: 50 acaattttatactaaagctagcacaaagttgacacacttattttgggatgaagggagta 108
|||| ||| |||||||| ||| |||||||||| ||||||||||||||||| ||||||||
Sbjct: 50 acaactttgtactaaagttagtacaaagttgagacacttattttgggatggagggagta 108
>RF00906;MIR1122;AY133251.1/901-1005 112509:Hordeum vulgare subsp.
vulgare (domesticated barley)
Length = 105
Score = 67.9 bits (34), Expect = 3e-11
Identities = 82/98 (83%)
Strand = Plus / Plus
Query: 11 atactccctccgtccaaaaataactgtatcaagcttaaaacaattttatactaaagctag 70
||||||||||||| | ||||||| ||| | ||| || |||||||| ||||| ||||||
Sbjct: 4 atactccctccgttccaaaataagtgtcttgagcgtagtacaattttgtactagagctag 63
Query: 71 cacaaagttgacacacttattttgggatgaagggagta 108
|||||||||| ||| ||||||||||| | ||||||||
Sbjct: 64 tacaaagttgagacagttattttgggacggagggagta 101
Score = 46.1 bits (23), Expect = 1e-04
Identities = 29/31 (93%)
Strand = Plus / Minus
Query: 12 tactccctccgtccaaaaataactgtatcaa 42
|||||||||||||| ||||||||||| ||||
Sbjct: 101 tactccctccgtcccaaaataactgtctcaa 71
>RF00906;MIR1122;DQ445238.1/5626-5730 112509:Hordeum vulgare subsp.
vulgare (domesticated barley)
Length = 105
Score = 65.9 bits (33), Expect = 1e-10
Identities = 81/97 (83%)
Strand = Plus / Plus
Query: 12 tactccctccgtccaaaaataactgtatcaagcttaaaacaattttatactaaagctagc 71
|||||||||||||| ||||||||||| | ||||||| | || |||||| || | ||||
Sbjct: 5 tactccctccgtcccaaaataactgtcttaagcttagtataaatttatattagatctagt 64
Query: 72 acaaagttgacacacttattttgggatgaagggagta 108
| |||||||| ||| ||||||||||| | ||||||||
Sbjct: 65 ataaagttgagacagttattttgggacggagggagta 101
Score = 52.0 bits (26), Expect = 2e-06
Identities = 32/34 (94%)
Strand = Plus / Minus
Query: 9 aaatactccctccgtccaaaaataactgtatcaa 42
||||||||||||||||| ||||||||||| ||||
Sbjct: 104 aaatactccctccgtcccaaaataactgtctcaa 71
>RF00906;MIR1122;EU282768.1/632-528 112509:Hordeum vulgare subsp.
vulgare (domesticated barley)
Length = 105
Score = 63.9 bits (32), Expect = 4e-10
Identities = 83/100 (83%)
Strand = Plus / Plus
Query: 12 tactccctccgtccaaaaataactgtatcaagcttaaaacaattttatactaaagctagc 71
|||||||||||||| ||||||||| | |||| |||| |||| ||||||||| ||||||
Sbjct: 5 tactccctccgtcccaaaataactttctcaaacttagtacaactttatactagagctagt 64
Query: 72 acaaagttgacacacttattttgggatgaagggagtagta 111
|||| ||| | |||||||||| || | |||||||||||
Sbjct: 65 gtaaagctgagatacttattttgagacggagggagtagta 104
>RF00906;MIR1122;DQ175992.1/50-154 112509:Hordeum vulgare subsp.
vulgare (domesticated barley)
Length = 105
Score = 61.9 bits (31), Expect = 2e-09
Identities = 70/83 (84%)
Strand = Plus / Plus
Query: 27 aaaataactgtatcaagcttaaaacaattttatactaaagctagcacaaagttgacacac 86
||||||| ||| | ||||||| | |||||||||||| |||||| |||||||| | |||
Sbjct: 20 aaaataagtgtcttaagcttagtataattttatactagagctagaacaaagttaagacaa 79
Query: 87 ttattttgggatgaagggagtag 109
||||||||||| | |||||||||
Sbjct: 80 ttattttgggacggagggagtag 102
>RF00906;MIR1122;AK252392.1/1279-1175 112509:Hordeum vulgare subsp.
vulgare (domesticated barley)
Length = 105
Score = 60.0 bits (30), Expect = 7e-09
Identities = 81/98 (82%)
Strand = Plus / Plus
Query: 11 atactccctccgtccaaaaataactgtatcaagcttaaaacaattttatactaaagctag 70
|||| |||||||||| ||||||| ||| | ||||||| |||||||||||| ||||||
Sbjct: 4 ataccccctccgtcccaaaataagtgtcttaagcttagtacaattttatacatgagctag 63
Query: 71 cacaaagttgacacacttattttgggatgaagggagta 108
|||||||| | ||| |||||||||| | ||||||||
Sbjct: 64 tacaaagttaagacagatattttgggacggagggagta 101
>RF00906;MIR1122;DQ901436.1/1229-1333 4565:Triticum aestivum (bread
wheat)
Length = 105
Score = 58.0 bits (29), Expect = 3e-08
Identities = 41/45 (91%)
Strand = Plus / Minus
Query: 62 taaagctagcacaaagttgacacacttattttgggatgaagggag 106
||||||||| |||||||||| ||||||||||||||| | ||||||
Sbjct: 51 taaagctagtacaaagttgagacacttattttgggacggagggag 7
>RF00906;MIR1122;AJ234485.1/114-218 4513:Hordeum vulgare
Length = 105
Score = 56.0 bits (28), Expect = 1e-07
Identities = 82/100 (82%)
Strand = Plus / Plus
Query: 12 tactccctccgtccaaaaataactgtatcaagcttaaaacaattttatactaaagctagc 71
||||||||||||| ||||||| ||| | || |||| |||||||| ||||| ||||||
Sbjct: 5 tactccctccgtctcaaaataagtgtcttaatcttagtacaattttgtactagagctagt 64
Query: 72 acaaagttgacacacttattttgggatgaagggagtagta 111
|||| ||||| ||| |||||||| || |||||||||||
Sbjct: 65 acaatgttgagacagttattttgagacagagggagtagta 104
>RF00906;MIR1122;AJ400714.1/3663-3767 4565:Triticum aestivum (bread
wheat)
Length = 105
Score = 54.0 bits (27), Expect = 4e-07
Identities = 72/87 (82%)
Strand = Plus / Minus
Query: 11 atactccctccgtccaaaaataactgtatcaagcttaaaacaattttatactaaagctag 70
||||||||||||||| ||||||| ||| |||| |||| |||| ||| ||||| || |||
Sbjct: 102 atactccctccgtcccaaaataagtgtctcaaccttagtacaactttgtactagagttag 43
Query: 71 cacaaagttgacacacttattttggga 97
||| |||| |||||||||||||||
Sbjct: 42 tgtaaaattgagacacttattttggga 16
>RF00906;MIR1122;EU282770.1/593-711 112509:Hordeum vulgare subsp.
vulgare (domesticated barley)
Length = 119
Score = 52.0 bits (26), Expect = 2e-06
Identities = 74/90 (82%)
Strand = Plus / Minus
Query: 22 gtccaaaaataactgtatcaagcttaaaacaattttatactaaagctagcacaaagttga 81
|||| ||||||||| | |||| |||| |||| ||||||||| |||||| ||||||||
Sbjct: 91 gtcccaaaataactttctcaaacttagtacaactttatactagagctagggtaaagttga 32
Query: 82 cacacttattttgggatgaagggagtagta 111
|||| ||||||| || | |||||||||||
Sbjct: 31 gacacctattttgagacggagggagtagta 2
Score = 44.1 bits (22), Expect = 4e-04
Identities = 25/26 (96%)
Strand = Plus / Minus
Query: 12 tactccctccgtccaaaaataactgt 37
|||||||||||||| |||||||||||
Sbjct: 115 tactccctccgtcccaaaataactgt 90
>RF00906;MIR1122;AF521177.1/206122-206018 4513:Hordeum vulgare
Length = 105
Score = 52.0 bits (26), Expect = 2e-06
Identities = 71/86 (82%)
Strand = Plus / Plus
Query: 9 aaatactccctccgtccaaaaataactgtatcaagcttaaaacaattttatactaaagct 68
||||||||||||| | ||||||| ||| ||| ||||| |||| ||| ||||| ||||
Sbjct: 2 aaatactccctccatttcaaaataattgtttcatgcttagtacaactttgtactagagct 61
Query: 69 agcacaaagttgacacacttattttg 94
|| |||||||||| ||| ||||||||
Sbjct: 62 agtacaaagttgagacatttattttg 87
>RF00906;MIR1122;AF488415.1/78603-78755 4568:Triticum monococcum
Length = 153
Score = 50.1 bits (25), Expect = 7e-06
Identities = 31/33 (93%)
Strand = Plus / Minus
Query: 11 atactccctccgtccaaaaataactgtatcaag 43
||||||||||||||| ||||||||||| |||||
Sbjct: 150 atactccctccgtcccaaaataactgtctcaag 118
Score = 46.1 bits (23), Expect = 1e-04
Identities = 50/59 (84%)
Strand = Plus / Plus
Query: 50 acaattttatactaaagctagcacaaagttgacacacttattttgggatgaagggagta 108
|||| ||| |||||||| ||| ||||| |||| ||| ||||||||||| | ||||||||
Sbjct: 91 acaactttgtactaaagttagtacaaacttgagacagttattttgggacggagggagta 149
Score = 44.1 bits (22), Expect = 4e-04
Identities = 28/30 (93%)
Strand = Plus / Minus
Query: 77 gttgacacacttattttgggatgaagggag 106
||||| ||||||||||||||| ||||||||
Sbjct: 36 gttgagacacttattttgggacgaagggag 7
>RF00906;MIR1122;DQ537336.1/120340-120474 4565:Triticum aestivum
(bread wheat)
Length = 135
Score = 48.1 bits (24), Expect = 3e-05
Identities = 24/24 (100%)
Strand = Plus / Minus
Query: 10 aatactccctccgtccaaaaataa 33
||||||||||||||||||||||||
Sbjct: 133 aatactccctccgtccaaaaataa 110
>RF00906;MIR1122;AK249748.1/2677-2573 112509:Hordeum vulgare subsp.
vulgare (domesticated barley)
Length = 105
Score = 48.1 bits (24), Expect = 3e-05
Identities = 69/84 (82%)
Strand = Plus / Minus
Query: 12 tactccctccgtccaaaaataactgtatcaagcttaaaacaattttatactaaagctagc 71
||||||||||||| ||||||| ||| | || |||| | || |||||| |||||||||
Sbjct: 101 tactccctccgtcgcaaaataaatgtcttaaacttagtataaatttatagtaaagctagt 42
Query: 72 acaaagttgacacacttattttgg 95
|||||||| | ||| |||||||||
Sbjct: 41 acaaagttaagacagttattttgg 18
>RF00906;MIR1122;FJ374625.1/3001-2870 4573:Aegilops speltoides
Length = 132
Score = 48.1 bits (24), Expect = 3e-05
Identities = 42/48 (87%)
Strand = Plus / Plus
Query: 61 ctaaagctagcacaaagttgacacacttattttgggatgaagggagta 108
|||||| ||| |||||||||| |||||||||||||||| || |||||
Sbjct: 81 ctaaagttagtacaaagttgagtcacttattttgggatggagcgagta 128
Score = 44.1 bits (22), Expect = 4e-04
Identities = 40/46 (86%)
Strand = Plus / Minus
Query: 63 aaagctagcacaaagttgacacacttattttgggatgaagggagta 108
|||| ||| |||||||||| |||||||||||||| | ||||||||
Sbjct: 50 aaagttagtacaaagttgagtcacttattttgggacggagggagta 5
>RF00906;MIR1122;AF525764.1/1593-1489 200361:Aegilops tauschii
subsp. strangulata
Length = 105
Score = 46.1 bits (23), Expect = 1e-04
Identities = 26/27 (96%)
Strand = Plus / Plus
Query: 83 acacttattttgggatgaagggagtag 109
||||||||||||||||| |||||||||
Sbjct: 76 acacttattttgggatggagggagtag 102
>RF00906;MIR1122;DQ900687.1/24296-24401 112509:Hordeum vulgare
subsp. vulgare (domesticated barley)
Length = 106
Score = 44.1 bits (22), Expect = 4e-04
Identities = 25/26 (96%)
Strand = Plus / Minus
Query: 8 caaatactccctccgtccaaaaataa 33
|||||||||||||||||| |||||||
Sbjct: 106 caaatactccctccgtcctaaaataa 81
>RF00906;MIR1122;AP003290.2/25910-26045 39947:Oryza sativa Japonica
Group
Length = 136
Score = 44.1 bits (22), Expect = 4e-04
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 87 ttattttgggatgaagggagta 108
||||||||||||||||||||||
Sbjct: 111 ttattttgggatgaagggagta 132
>RF00906;MIR1122;AP004862.3/965-874 39947:Oryza sativa Japonica
Group
Length = 92
Score = 44.1 bits (22), Expect = 4e-04
Identities = 25/26 (96%)
Strand = Plus / Minus
Query: 83 acacttattttgggatgaagggagta 108
||||||||||||||| ||||||||||
Sbjct: 30 acacttattttgggaggaagggagta 5
>RF00906;MIR1122;AAAA02019483.1/16379-16491 39946:Oryza sativa
Indica Group
Length = 113
Score = 44.1 bits (22), Expect = 4e-04
Identities = 25/26 (96%)
Strand = Plus / Minus
Query: 10 aatactccctccgtccaaaaataact 35
|||||||||||||||| |||||||||
Sbjct: 111 aatactccctccgtcccaaaataact 86