miRNEST 2.0: an integrative microRNA resource miRNEST 2.0, an integrative microRNA resource :: BLAST


>46679_miR1439:micropc
          Length = 97

 Score =  121 bits (61), Expect = 1e-28
 Identities = 88/97 (90%)
 Strand = Plus / Minus

                                                                       
Query: 17  tactccctccgtctcaaaataagtgtcttaagcttagtacaaatttgtactagagcttat 76
           ||||||||||||  |||||||||||||| ||||||||||||| ||| ||||||||||  |
Sbjct: 97  tactccctccgttccaaaataagtgtctcaagcttagtacaattttatactagagctagt 38

                                                
Query: 77  acaaagttgagacagttatttttggacggagggagta 113
           ||||||||||||||||||||||  |||||||||||||
Sbjct: 37  acaaagttgagacagttattttgagacggagggagta 1



 Score = 48.1 bits (24), Expect = 2e-06
 Identities = 27/28 (96%)
 Strand = Plus / Plus

                                      
Query: 17 tactccctccgtctcaaaataagtgtct 44
          |||||||||||||||||||||| |||||
Sbjct: 1  tactccctccgtctcaaaataactgtct 28




>45970_miR1439:micropc
          Length = 99

 Score =  113 bits (57), Expect = 3e-26
 Identities = 87/97 (89%)
 Strand = Plus / Plus

                                                                       
Query: 17  tactccctccgtctcaaaataagtgtcttaagcttagtacaaatttgtactagagcttat 76
           ||||||||||||| |||||||||| |||||||||||||| || ||||||||||  ||  |
Sbjct: 2   tactccctccgtcccaaaataagtctcttaagcttagtataactttgtactagctctagt 61

                                                
Query: 77  acaaagttgagacagttatttttggacggagggagta 113
           |||||||||| ||||||||||| ||||||||||||||
Sbjct: 62  acaaagttgatacagttattttgggacggagggagta 98




>45205_miR1439:micropc
          Length = 99

 Score =  113 bits (57), Expect = 3e-26
 Identities = 87/97 (89%)
 Strand = Plus / Plus

                                                                       
Query: 17  tactccctccgtctcaaaataagtgtcttaagcttagtacaaatttgtactagagcttat 76
           ||||||||||||| |||||||||| |||||||||||||| || ||||||||||  ||  |
Sbjct: 2   tactccctccgtcccaaaataagtctcttaagcttagtataactttgtactagctctagt 61

                                                
Query: 77  acaaagttgagacagttatttttggacggagggagta 113
           |||||||||| ||||||||||| ||||||||||||||
Sbjct: 62  acaaagttgatacagttattttgggacggagggagta 98




>45189_miR1439:micropc
          Length = 78

 Score = 52.0 bits (26), Expect = 1e-07
 Identities = 32/34 (94%)
 Strand = Plus / Plus

                                             
Query: 80  aagttgagacagttatttttggacggagggagta 113
           ||||||||||||||||||| | ||||||||||||
Sbjct: 43  aagttgagacagttattttggaacggagggagta 76




>46836_miR1439:micropc
          Length = 86

 Score = 42.1 bits (21), Expect = 1e-04
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                               
Query: 17 tactccctccgtctcaaaata 37
          |||||||||||||||||||||
Sbjct: 1  tactccctccgtctcaaaata 21




>46048_miR1439:micropc
          Length = 58

 Score = 42.1 bits (21), Expect = 1e-04
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                   
Query: 17 tactccctccgtctcaaaataagtg 41
          ||||||||||||| |||||||||||
Sbjct: 56 tactccctccgtcccaaaataagtg 32




>45320_miR1439:micropc
          Length = 74

 Score = 40.1 bits (20), Expect = 4e-04
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                  
Query: 17 tactccctccgtctcaaaataagt 40
          ||||||||||||| ||||||||||
Sbjct: 72 tactccctccgtcccaaaataagt 49




>45276_miR1439:micropc
          Length = 74

 Score = 40.1 bits (20), Expect = 4e-04
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                  
Query: 17 tactccctccgtctcaaaataagt 40
          ||||||||||||| ||||||||||
Sbjct: 72 tactccctccgtcccaaaataagt 49




>45016_miR1439:micropc
          Length = 74

 Score = 40.1 bits (20), Expect = 4e-04
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                  
Query: 17 tactccctccgtctcaaaataagt 40
          ||||||||||||| ||||||||||
Sbjct: 72 tactccctccgtcccaaaataagt 49