miRNEST 2.0: an integrative microRNA resource miRNEST 2.0, an integrative microRNA resource :: BLAST


>45634_miR1133:micropc
          Length = 120

 Score = 67.9 bits (34), Expect = 2e-12
 Identities = 54/61 (88%)
 Strand = Plus / Minus

                                                                       
Query: 90  aactaaaataaatctagatacatctatttctaggacaagtatttatgaacagagggagta 149
           ||||||||||||| |||||||||||||||| | |||||||||||  | || |||||||||
Sbjct: 61  aactaaaataaatntagatacatctatttcgatgacaagtattttcggacggagggagta 2

            
Query: 150 t 150
           |
Sbjct: 1   t 1



 Score = 44.1 bits (22), Expect = 3e-05
 Identities = 25/26 (96%)
 Strand = Plus / Plus

                                    
Query: 17 tactccctccgtccggaaatacttgt 42
          ||||||||||||||| ||||||||||
Sbjct: 2  tactccctccgtccgaaaatacttgt 27



 Score = 44.1 bits (22), Expect = 3e-05
 Identities = 25/26 (96%)
 Strand = Plus / Minus

                                     
Query: 17  tactccctccgtccggaaatacttgt 42
           ||||||||| ||||||||||||||||
Sbjct: 119 tactccctcggtccggaaatacttgt 94




>45127_miR1133:micropc
          Length = 120

 Score = 67.9 bits (34), Expect = 2e-12
 Identities = 54/61 (88%)
 Strand = Plus / Minus

                                                                       
Query: 90  aactaaaataaatctagatacatctatttctaggacaagtatttatgaacagagggagta 149
           ||||||||||||| |||||||||||||||| | |||||||||||  | || |||||||||
Sbjct: 61  aactaaaataaatntagatacatctatttcgatgacaagtattttcggacggagggagta 2

            
Query: 150 t 150
           |
Sbjct: 1   t 1



 Score = 44.1 bits (22), Expect = 3e-05
 Identities = 25/26 (96%)
 Strand = Plus / Plus

                                    
Query: 17 tactccctccgtccggaaatacttgt 42
          ||||||||||||||| ||||||||||
Sbjct: 2  tactccctccgtccgaaaatacttgt 27



 Score = 44.1 bits (22), Expect = 3e-05
 Identities = 25/26 (96%)
 Strand = Plus / Minus

                                     
Query: 17  tactccctccgtccggaaatacttgt 42
           ||||||||| ||||||||||||||||
Sbjct: 119 tactccctcggtccggaaatacttgt 94




>45057_miR1133:micropc
          Length = 120

 Score = 67.9 bits (34), Expect = 2e-12
 Identities = 54/61 (88%)
 Strand = Plus / Minus

                                                                       
Query: 90  aactaaaataaatctagatacatctatttctaggacaagtatttatgaacagagggagta 149
           ||||||||||||| |||||||||||||||| | |||||||||||  | || |||||||||
Sbjct: 61  aactaaaataaatntagatacatctatttcgatgacaagtattttcggacggagggagta 2

            
Query: 150 t 150
           |
Sbjct: 1   t 1



 Score = 44.1 bits (22), Expect = 3e-05
 Identities = 25/26 (96%)
 Strand = Plus / Plus

                                    
Query: 17 tactccctccgtccggaaatacttgt 42
          ||||||||||||||| ||||||||||
Sbjct: 2  tactccctccgtccgaaaatacttgt 27



 Score = 44.1 bits (22), Expect = 3e-05
 Identities = 25/26 (96%)
 Strand = Plus / Minus

                                     
Query: 17  tactccctccgtccggaaatacttgt 42
           ||||||||| ||||||||||||||||
Sbjct: 119 tactccctcggtccggaaatacttgt 94




>46780_miR1128:micropc
          Length = 117

 Score = 61.9 bits (31), Expect = 1e-10
 Identities = 34/35 (97%)
 Strand = Plus / Minus

                                              
Query: 17  tactccctccgtccggaaatacttgttctagaaat 51
           |||||||||||||||||||||||||| ||||||||
Sbjct: 117 tactccctccgtccggaaatacttgtcctagaaat 83



 Score = 40.1 bits (20), Expect = 5e-04
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 114 tatttctaggacaagtattt 133
           ||||||||||||||||||||
Sbjct: 82  tatttctaggacaagtattt 101




>46614_miR1133:micropc
          Length = 118

 Score = 61.9 bits (31), Expect = 1e-10
 Identities = 34/35 (97%)
 Strand = Plus / Minus

                                              
Query: 17  tactccctccgtccggaaatacttgttctagaaat 51
           |||||||||||||||||||||||||| ||||||||
Sbjct: 118 tactccctccgtccggaaatacttgtcctagaaat 84



 Score = 40.1 bits (20), Expect = 5e-04
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 114 tatttctaggacaagtattt 133
           ||||||||||||||||||||
Sbjct: 83  tatttctaggacaagtattt 102




>45821_miR1128:micropc
          Length = 117

 Score = 61.9 bits (31), Expect = 1e-10
 Identities = 34/35 (97%)
 Strand = Plus / Minus

                                              
Query: 17  tactccctccgtccggaaatacttgttctagaaat 51
           |||||||||||||||||||||||||| ||||||||
Sbjct: 117 tactccctccgtccggaaatacttgtcctagaaat 83



 Score = 40.1 bits (20), Expect = 5e-04
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 114 tatttctaggacaagtattt 133
           ||||||||||||||||||||
Sbjct: 82  tatttctaggacaagtattt 101




>46213_miR1133:micropc
          Length = 120

 Score = 60.0 bits (30), Expect = 5e-10
 Identities = 42/46 (91%)
 Strand = Plus / Plus

                                                         
Query: 88  ataactaaaataaatctagatacatctatttctaggacaagtattt 133
           ||||||||||||| |||| |||||||||||| || |||||||||||
Sbjct: 57  ataactaaaataattctacatacatctatttttaagacaagtattt 102



 Score = 44.1 bits (22), Expect = 3e-05
 Identities = 25/26 (96%)
 Strand = Plus / Minus

                                     
Query: 17  tactccctccgtccggaaatacttgt 42
           |||||||||| |||||||||||||||
Sbjct: 118 tactccctccatccggaaatacttgt 93



 Score = 40.1 bits (20), Expect = 5e-04
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 114 tatttctaggacaagtattt 133
           ||||||||||||||||||||
Sbjct: 38  tatttctaggacaagtattt 19




>45304_miR1128:micropc
          Length = 108

 Score = 56.0 bits (28), Expect = 9e-09
 Identities = 52/60 (86%)
 Strand = Plus / Plus

                                                                       
Query: 90  aactaaaataaatctagatacatctatttctaggacaagtatttatgaacagagggagta 149
           |||||||||| ||||||||||||  ||||||| |||||||| ||  |||| |||||||||
Sbjct: 49  aactaaaatacatctagatacattcatttctacgacaagtaattccgaacggagggagta 108



 Score = 40.1 bits (20), Expect = 5e-04
 Identities = 32/36 (88%)
 Strand = Plus / Minus

                                               
Query: 17  tactccctccgtccggaaatacttgttctagaaatg 52
           |||||||||||| ||||| |||||||  ||||||||
Sbjct: 108 tactccctccgttcggaattacttgtcgtagaaatg 73




>46044_miR1128:micropc
          Length = 128

 Score = 52.0 bits (26), Expect = 1e-07
 Identities = 26/26 (100%)
 Strand = Plus / Minus

                                     
Query: 17  tactccctccgtccggaaatacttgt 42
           ||||||||||||||||||||||||||
Sbjct: 128 tactccctccgtccggaaatacttgt 103



 Score = 40.1 bits (20), Expect = 5e-04
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                   
Query: 90  aactaaaataaatctagatacatc 113
           |||||||||| |||||||||||||
Sbjct: 59  aactaaaatacatctagatacatc 82




>45461_miR1128:micropc
          Length = 128

 Score = 52.0 bits (26), Expect = 1e-07
 Identities = 26/26 (100%)
 Strand = Plus / Minus

                                     
Query: 17  tactccctccgtccggaaatacttgt 42
           ||||||||||||||||||||||||||
Sbjct: 128 tactccctccgtccggaaatacttgt 103



 Score = 40.1 bits (20), Expect = 5e-04
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                   
Query: 90  aactaaaataaatctagatacatc 113
           |||||||||| |||||||||||||
Sbjct: 59  aactaaaatacatctagatacatc 82




>44841_miR1128:micropc
          Length = 128

 Score = 52.0 bits (26), Expect = 1e-07
 Identities = 26/26 (100%)
 Strand = Plus / Minus

                                     
Query: 17  tactccctccgtccggaaatacttgt 42
           ||||||||||||||||||||||||||
Sbjct: 128 tactccctccgtccggaaatacttgt 103



 Score = 40.1 bits (20), Expect = 5e-04
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                   
Query: 90  aactaaaataaatctagatacatc 113
           |||||||||| |||||||||||||
Sbjct: 59  aactaaaatacatctagatacatc 82




>45649_miR1135:micropc
          Length = 95

 Score = 50.1 bits (25), Expect = 5e-07
 Identities = 37/41 (90%)
 Strand = Plus / Plus

                                                    
Query: 90  aactaaaataaatctagatacatctatttctaggacaagta 130
           |||||||||| ||||||||||||| ||||||  ||||||||
Sbjct: 43  aactaaaatacatctagatacatccatttctgcgacaagta 83




>45643_miR1136:micropc
          Length = 63

 Score = 46.1 bits (23), Expect = 8e-06
 Identities = 29/31 (93%)
 Strand = Plus / Minus

                                          
Query: 90  aactaaaataaatctagatacatctatttct 120
           |||||||||| ||||||||||||| ||||||
Sbjct: 38  aactaaaatacatctagatacatccatttct 8




>45512_miR1136:micropc
          Length = 63

 Score = 46.1 bits (23), Expect = 8e-06
 Identities = 26/27 (96%)
 Strand = Plus / Minus

                                      
Query: 90  aactaaaataaatctagatacatctat 116
           |||||||||| ||||||||||||||||
Sbjct: 38  aactaaaatacatctagatacatctat 12




>45233_miR1128:micropc
          Length = 133

 Score = 46.1 bits (23), Expect = 8e-06
 Identities = 26/27 (96%)
 Strand = Plus / Minus

                                      
Query: 16  gtactccctccgtccggaaatacttgt 42
           |||||||||||||||| ||||||||||
Sbjct: 131 gtactccctccgtccgaaaatacttgt 105



 Score = 44.1 bits (22), Expect = 3e-05
 Identities = 25/26 (96%)
 Strand = Plus / Plus

                                    
Query: 17 tactccctccgtccggaaatacttgt 42
          ||||||||||||||||||||| ||||
Sbjct: 4  tactccctccgtccggaaatagttgt 29



 Score = 40.1 bits (20), Expect = 5e-04
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                   
Query: 90  aactaaaataaatctagatacatc 113
           |||||||||| |||||||||||||
Sbjct: 73  aactaaaatacatctagatacatc 50




>46822_miR1135:micropc
          Length = 93

 Score = 44.1 bits (22), Expect = 3e-05
 Identities = 34/38 (89%)
 Strand = Plus / Plus

                                                 
Query: 93  taaaataaatctagatacatctatttctaggacaagta 130
           |||||||  |||||||||||||||||||  ||||||||
Sbjct: 44  taaaatatgtctagatacatctatttctgcgacaagta 81




>46650_miR1128:micropc
          Length = 114

 Score = 44.1 bits (22), Expect = 3e-05
 Identities = 25/26 (96%)
 Strand = Plus / Plus

                                    
Query: 17 tactccctccgtccggaaatacttgt 42
          ||||||||||||||| ||||||||||
Sbjct: 1  tactccctccgtccgaaaatacttgt 26



 Score = 40.1 bits (20), Expect = 5e-04
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                   
Query: 94  aaaataaatctagatacatctatt 117
           |||||| |||||||||||||||||
Sbjct: 62  aaaatacatctagatacatctatt 85




>46443_miR1128:micropc
          Length = 114

 Score = 44.1 bits (22), Expect = 3e-05
 Identities = 25/26 (96%)
 Strand = Plus / Plus

                                    
Query: 17 tactccctccgtccggaaatacttgt 42
          ||||||||||||||| ||||||||||
Sbjct: 1  tactccctccgtccgaaaatacttgt 26



 Score = 40.1 bits (20), Expect = 5e-04
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                   
Query: 94  aaaataaatctagatacatctatt 117
           |||||| |||||||||||||||||
Sbjct: 62  aaaatacatctagatacatctatt 85




>46231_miR1128:micropc
          Length = 114

 Score = 44.1 bits (22), Expect = 3e-05
 Identities = 25/26 (96%)
 Strand = Plus / Plus

                                    
Query: 17 tactccctccgtccggaaatacttgt 42
          ||||||||||||||| ||||||||||
Sbjct: 1  tactccctccgtccgaaaatacttgt 26



 Score = 40.1 bits (20), Expect = 5e-04
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                   
Query: 94  aaaataaatctagatacatctatt 117
           |||||| |||||||||||||||||
Sbjct: 62  aaaatacatctagatacatctatt 85




>46218_miR1128:micropc
          Length = 114

 Score = 44.1 bits (22), Expect = 3e-05
 Identities = 25/26 (96%)
 Strand = Plus / Plus

                                    
Query: 17 tactccctccgtccggaaatacttgt 42
          ||||||||||||||| ||||||||||
Sbjct: 1  tactccctccgtccgaaaatacttgt 26



 Score = 40.1 bits (20), Expect = 5e-04
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                   
Query: 94  aaaataaatctagatacatctatt 117
           |||||| |||||||||||||||||
Sbjct: 62  aaaatacatctagatacatctatt 85




>46180_miR1128:micropc
          Length = 114

 Score = 44.1 bits (22), Expect = 3e-05
 Identities = 25/26 (96%)
 Strand = Plus / Plus

                                    
Query: 17 tactccctccgtccggaaatacttgt 42
          ||||||||||||||| ||||||||||
Sbjct: 1  tactccctccgtccgaaaatacttgt 26



 Score = 40.1 bits (20), Expect = 5e-04
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                   
Query: 94  aaaataaatctagatacatctatt 117
           |||||| |||||||||||||||||
Sbjct: 62  aaaatacatctagatacatctatt 85




>46136_miR1128:micropc
          Length = 114

 Score = 44.1 bits (22), Expect = 3e-05
 Identities = 25/26 (96%)
 Strand = Plus / Plus

                                    
Query: 17 tactccctccgtccggaaatacttgt 42
          ||||||||||||||| ||||||||||
Sbjct: 1  tactccctccgtccgaaaatacttgt 26



 Score = 40.1 bits (20), Expect = 5e-04
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                   
Query: 94  aaaataaatctagatacatctatt 117
           |||||| |||||||||||||||||
Sbjct: 62  aaaatacatctagatacatctatt 85




>45836_miR1128:micropc
          Length = 114

 Score = 44.1 bits (22), Expect = 3e-05
 Identities = 25/26 (96%)
 Strand = Plus / Plus

                                    
Query: 17 tactccctccgtccggaaatacttgt 42
          ||||||||||||||| ||||||||||
Sbjct: 1  tactccctccgtccgaaaatacttgt 26



 Score = 40.1 bits (20), Expect = 5e-04
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                   
Query: 94  aaaataaatctagatacatctatt 117
           |||||| |||||||||||||||||
Sbjct: 62  aaaatacatctagatacatctatt 85




>45824_miR1128:micropc
          Length = 114

 Score = 44.1 bits (22), Expect = 3e-05
 Identities = 25/26 (96%)
 Strand = Plus / Plus

                                    
Query: 17 tactccctccgtccggaaatacttgt 42
          ||||||||||||||| ||||||||||
Sbjct: 1  tactccctccgtccgaaaatacttgt 26



 Score = 40.1 bits (20), Expect = 5e-04
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                   
Query: 94  aaaataaatctagatacatctatt 117
           |||||| |||||||||||||||||
Sbjct: 62  aaaatacatctagatacatctatt 85




>45818_miR1128:micropc
          Length = 114

 Score = 44.1 bits (22), Expect = 3e-05
 Identities = 25/26 (96%)
 Strand = Plus / Plus

                                    
Query: 17 tactccctccgtccggaaatacttgt 42
          ||||||||||||||| ||||||||||
Sbjct: 1  tactccctccgtccgaaaatacttgt 26



 Score = 40.1 bits (20), Expect = 5e-04
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                   
Query: 94  aaaataaatctagatacatctatt 117
           |||||| |||||||||||||||||
Sbjct: 62  aaaatacatctagatacatctatt 85




>45729_miR1128:micropc
          Length = 114

 Score = 44.1 bits (22), Expect = 3e-05
 Identities = 25/26 (96%)
 Strand = Plus / Plus

                                    
Query: 17 tactccctccgtccggaaatacttgt 42
          ||||||||||||||| ||||||||||
Sbjct: 1  tactccctccgtccgaaaatacttgt 26



 Score = 40.1 bits (20), Expect = 5e-04
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                   
Query: 94  aaaataaatctagatacatctatt 117
           |||||| |||||||||||||||||
Sbjct: 62  aaaatacatctagatacatctatt 85




>45575_miR1128:micropc
          Length = 114

 Score = 44.1 bits (22), Expect = 3e-05
 Identities = 25/26 (96%)
 Strand = Plus / Plus

                                    
Query: 17 tactccctccgtccggaaatacttgt 42
          ||||||||||||||| ||||||||||
Sbjct: 1  tactccctccgtccgaaaatacttgt 26



 Score = 40.1 bits (20), Expect = 5e-04
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                   
Query: 94  aaaataaatctagatacatctatt 117
           |||||| |||||||||||||||||
Sbjct: 62  aaaatacatctagatacatctatt 85




>45466_miR1128:micropc
          Length = 114

 Score = 44.1 bits (22), Expect = 3e-05
 Identities = 25/26 (96%)
 Strand = Plus / Plus

                                    
Query: 17 tactccctccgtccggaaatacttgt 42
          ||||||||||||||| ||||||||||
Sbjct: 1  tactccctccgtccgaaaatacttgt 26



 Score = 40.1 bits (20), Expect = 5e-04
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                   
Query: 94  aaaataaatctagatacatctatt 117
           |||||| |||||||||||||||||
Sbjct: 62  aaaatacatctagatacatctatt 85




>45199_miR1135:micropc
          Length = 93

 Score = 44.1 bits (22), Expect = 3e-05
 Identities = 34/38 (89%)
 Strand = Plus / Plus

                                                 
Query: 93  taaaataaatctagatacatctatttctaggacaagta 130
           |||||||  |||||||||||||||||||  ||||||||
Sbjct: 44  taaaatatgtctagatacatctatttctgcgacaagta 81




>45150_miR1128:micropc
          Length = 114

 Score = 44.1 bits (22), Expect = 3e-05
 Identities = 25/26 (96%)
 Strand = Plus / Plus

                                    
Query: 17 tactccctccgtccggaaatacttgt 42
          ||||||||||||||| ||||||||||
Sbjct: 1  tactccctccgtccgaaaatacttgt 26



 Score = 40.1 bits (20), Expect = 5e-04
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                   
Query: 94  aaaataaatctagatacatctatt 117
           |||||| |||||||||||||||||
Sbjct: 62  aaaatacatctagatacatctatt 85




>45094_miR1128:micropc
          Length = 114

 Score = 44.1 bits (22), Expect = 3e-05
 Identities = 25/26 (96%)
 Strand = Plus / Plus

                                    
Query: 17 tactccctccgtccggaaatacttgt 42
          ||||||||||||||| ||||||||||
Sbjct: 1  tactccctccgtccgaaaatacttgt 26



 Score = 40.1 bits (20), Expect = 5e-04
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                   
Query: 94  aaaataaatctagatacatctatt 117
           |||||| |||||||||||||||||
Sbjct: 62  aaaatacatctagatacatctatt 85




>45051_miR1135:micropc
          Length = 93

 Score = 42.1 bits (21), Expect = 1e-04
 Identities = 27/29 (93%)
 Strand = Plus / Plus

                                        
Query: 90  aactaaaataaatctagatacatctattt 118
           |||||||||| ||||||||||||| ||||
Sbjct: 41  aactaaaatacatctagatacatccattt 69




>46174_miR1135:micropc
          Length = 93

 Score = 40.1 bits (20), Expect = 5e-04
 Identities = 41/47 (87%), Gaps = 2/47 (4%)
 Strand = Plus / Plus

                                                          
Query: 72  aaatggacgtatctccataactaaaataaatctagatacatctattt 118
           |||||||||||| |  | |||||||||| ||||||||| ||||||||
Sbjct: 25  aaatggacgtattt--agaactaaaatacatctagatatatctattt 69




>45387_miR1439:micropc
          Length = 109

 Score = 40.1 bits (20), Expect = 5e-04
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                   
Query: 90  aactaaaataaatctagatacatc 113
           |||||||||| |||||||||||||
Sbjct: 61  aactaaaatacatctagatacatc 38