miRNEST 2.0, an integrative microRNA resource :: BLAST
BLASTN 2.2.20 [Feb-08-2009]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
>RF00906;MIR1122;AY943294.1/62260-62364 112509:Hordeum vulgare
subsp. vulgare (domesticated barley)
Length = 105
Score = 135 bits (68), Expect = 1e-31
Identities = 86/92 (93%)
Strand = Plus / Plus
Query: 12 tactccctccgtctcaaaataagtgtcttaagcttactacaattttgtactatctctaat 71
|||||||||||| |||||||||||||||||||||| ||||||||||||||| ||||||
Sbjct: 5 tactccctccgttccaaaataagtgtcttaagcttaatacaattttgtactaaatctaat 64
Query: 72 acaaagttgagacagttattttgagacggagg 103
||||||||||||||||||||||| ||||||||
Sbjct: 65 acaaagttgagacagttattttgggacggagg 96
>RF00906;MIR1122;AJ234485.1/114-218 4513:Hordeum vulgare
Length = 105
Score = 123 bits (62), Expect = 5e-28
Identities = 86/94 (91%)
Strand = Plus / Plus
Query: 12 tactccctccgtctcaaaataagtgtcttaagcttactacaattttgtactatctctaat 71
||||||||||||||||||||||||||||||| |||| ||||||||||||||| ||| |
Sbjct: 5 tactccctccgtctcaaaataagtgtcttaatcttagtacaattttgtactagagctagt 64
Query: 72 acaaagttgagacagttattttgagacggaggga 105
|||| |||||||||||||||||||||| ||||||
Sbjct: 65 acaatgttgagacagttattttgagacagaggga 98
>RF00906;MIR1122;AJ249141.1/1014-910 4513:Hordeum vulgare
Length = 105
Score = 119 bits (60), Expect = 9e-27
Identities = 87/96 (90%)
Strand = Plus / Plus
Query: 10 tatactccctccgtctcaaaataagtgtcttaagcttactacaattttgtactatctcta 69
|||| |||||| ||| ||||||||||||||||||||| ||||| ||||||||| |||
Sbjct: 3 tatattccctcggtcctaaaataagtgtcttaagcttagtacaactttgtactagagcta 62
Query: 70 atacaaagttgagacagttattttgagacggaggga 105
||||||||||||||||||||||||||||||||||||
Sbjct: 63 atacaaagttgagacagttattttgagacggaggga 98
Score = 54.0 bits (27), Expect = 4e-07
Identities = 30/31 (96%)
Strand = Plus / Minus
Query: 9 ttatactccctccgtctcaaaataagtgtct 39
||||||||||||||||||||||||| |||||
Sbjct: 104 ttatactccctccgtctcaaaataactgtct 74
>RF00906;MIR1122;AY133251.1/901-1005 112509:Hordeum vulgare subsp.
vulgare (domesticated barley)
Length = 105
Score = 115 bits (58), Expect = 1e-25
Identities = 88/98 (89%)
Strand = Plus / Plus
Query: 8 attatactccctccgtctcaaaataagtgtcttaagcttactacaattttgtactatctc 67
|||||||||||||||| ||||||||||||||| ||| || ||||||||||||||| |
Sbjct: 1 attatactccctccgttccaaaataagtgtcttgagcgtagtacaattttgtactagagc 60
Query: 68 taatacaaagttgagacagttattttgagacggaggga 105
|| |||||||||||||||||||||||| ||||||||||
Sbjct: 61 tagtacaaagttgagacagttattttgggacggaggga 98
>RF00906;MIR1122;EU282239.1/1196-1300 52152:Elymus repens
Length = 105
Score = 115 bits (58), Expect = 1e-25
Identities = 88/98 (89%)
Strand = Plus / Plus
Query: 8 attatactccctccgtctcaaaataagtgtcttaagcttactacaattttgtactatctc 67
||||||||||||||||| |||||||||||||| ||||||| ||||| |||||||||
Sbjct: 1 attatactccctccgtcccaaaataagtgtctcaagcttagtacaactttgtactaaagt 60
Query: 68 taatacaaagttgagacagttattttgagacggaggga 105
|||||||||||||||||| |||||||| ||||||||||
Sbjct: 61 taatacaaagttgagacatttattttgggacggaggga 98
>RF00906;MIR1122;EU282250.1/1190-1294 52152:Elymus repens
Length = 105
Score = 107 bits (54), Expect = 3e-23
Identities = 87/98 (88%)
Strand = Plus / Plus
Query: 8 attatactccctccgtctcaaaataagtgtcttaagcttactacaattttgtactatctc 67
||||||||||||||||| |||||||||||||| ||||||| ||||| ||||||||
Sbjct: 1 attatactccctccgtcccaaaataagtgtctcaagcttagtacaaccttgtactaaagt 60
Query: 68 taatacaaagttgagacagttattttgagacggaggga 105
|||||||||||||||||| |||||||| ||||||||||
Sbjct: 61 taatacaaagttgagacatttattttgggacggaggga 98
>RF00906;MIR1122;EU282755.1/953-849 112509:Hordeum vulgare subsp.
vulgare (domesticated barley)
Length = 105
Score = 99.6 bits (50), Expect = 8e-21
Identities = 83/94 (88%)
Strand = Plus / Plus
Query: 12 tactccctccgtctcaaaataagtgtcttaagcttactacaattttgtactatctctaat 71
||||||||||||| |||||||||||||| ||||||| | |||||||||||| ||| |
Sbjct: 5 tactccctccgtcccaaaataagtgtctcaagcttagtgtaattttgtactacagctagt 64
Query: 72 acaaagttgagacagttattttgagacggaggga 105
|||||||||||||| |||||||| ||||||||||
Sbjct: 65 acaaagttgagacacttattttgggacggaggga 98
Score = 52.0 bits (26), Expect = 2e-06
Identities = 29/30 (96%)
Strand = Plus / Minus
Query: 10 tatactccctccgtctcaaaataagtgtct 39
||||||||||||||| ||||||||||||||
Sbjct: 103 tatactccctccgtcccaaaataagtgtct 74
>RF00906;MIR1122;EU593539.1/914-1018 4513:Hordeum vulgare
Length = 105
Score = 99.6 bits (50), Expect = 8e-21
Identities = 83/94 (88%)
Strand = Plus / Plus
Query: 12 tactccctccgtctcaaaataagtgtcttaagcttactacaattttgtactatctctaat 71
||||||||||||| |||||||| ||||||||||||| || || ||| ||||| |||| |
Sbjct: 5 tactccctccgtcccaaaataactgtcttaagcttagtataaatttatactagatctagt 64
Query: 72 acaaagttgagacagttattttgagacggaggga 105
| ||||||||||||||||||||| ||||||||||
Sbjct: 65 ataaagttgagacagttattttgggacggaggga 98
>RF00906;MIR1122;DQ445238.1/5626-5730 112509:Hordeum vulgare subsp.
vulgare (domesticated barley)
Length = 105
Score = 91.7 bits (46), Expect = 2e-18
Identities = 82/94 (87%)
Strand = Plus / Plus
Query: 12 tactccctccgtctcaaaataagtgtcttaagcttactacaattttgtactatctctaat 71
||||||||||||| |||||||| ||||||||||||| || || ||| || || |||| |
Sbjct: 5 tactccctccgtcccaaaataactgtcttaagcttagtataaatttatattagatctagt 64
Query: 72 acaaagttgagacagttattttgagacggaggga 105
| ||||||||||||||||||||| ||||||||||
Sbjct: 65 ataaagttgagacagttattttgggacggaggga 98
>RF00906;MIR1122;FJ236275.1/674-570 4573:Aegilops speltoides
Length = 105
Score = 91.7 bits (46), Expect = 2e-18
Identities = 82/94 (87%)
Strand = Plus / Plus
Query: 12 tactccctccgtctcaaaataagtgtcttaagcttactacaattttgtactatctctaat 71
|||||||||||||||||||||||||||| |||| || ||||| ||||||||| || |
Sbjct: 5 tactccctccgtctcaaaataagtgtctcaagcctagtacaactttgtactaaagttagt 64
Query: 72 acaaagttgagacagttattttgagacggaggga 105
|||||||| ||||| |||||||| ||||||||||
Sbjct: 65 acaaagttaagacacttattttgggacggaggga 98
Score = 54.0 bits (27), Expect = 4e-07
Identities = 30/31 (96%)
Strand = Plus / Minus
Query: 12 tactccctccgtctcaaaataagtgtcttaa 42
||||||||||||| |||||||||||||||||
Sbjct: 101 tactccctccgtcccaaaataagtgtcttaa 71
Score = 48.1 bits (24), Expect = 3e-05
Identities = 27/28 (96%)
Strand = Plus / Minus
Query: 78 ttgagacagttattttgagacggaggga 105
|||||||| |||||||||||||||||||
Sbjct: 35 ttgagacacttattttgagacggaggga 8
>RF00906;MIR1122;AK252392.1/1279-1175 112509:Hordeum vulgare subsp.
vulgare (domesticated barley)
Length = 105
Score = 89.7 bits (45), Expect = 8e-18
Identities = 84/97 (86%)
Strand = Plus / Plus
Query: 9 ttatactccctccgtctcaaaataagtgtcttaagcttactacaattttgtactatctct 68
|||||| ||||||||| |||||||||||||||||||||| ||||||||| ||| ||
Sbjct: 2 ttataccccctccgtcccaaaataagtgtcttaagcttagtacaattttatacatgagct 61
Query: 69 aatacaaagttgagacagttattttgagacggaggga 105
| ||||||||| |||||| ||||||| ||||||||||
Sbjct: 62 agtacaaagttaagacagatattttgggacggaggga 98
>RF00906;MIR1122;DQ871219.1/106890-106994 85692:Triticum turgidum
subsp. dicoccoides
Length = 105
Score = 85.7 bits (43), Expect = 1e-16
Identities = 82/95 (86%)
Strand = Plus / Plus
Query: 11 atactccctccgtctcaaaataagtgtcttaagcttactacaattttgtactatctctaa 70
|||||||||||||| ||||||||||||||| |||||| || || ||||||||| ||
Sbjct: 4 atactccctccgtcccaaaataagtgtcttgagcttagtaaaaatttgtactagagatag 63
Query: 71 tacaaagttgagacagttattttgagacggaggga 105
||||||||||||||| |||||||| || |||||||
Sbjct: 64 tacaaagttgagacacttattttgggatggaggga 98
>RF00906;MIR1122;AK249560.1/988-1092 112509:Hordeum vulgare subsp.
vulgare (domesticated barley)
Length = 105
Score = 85.7 bits (43), Expect = 1e-16
Identities = 85/99 (85%)
Strand = Plus / Minus
Query: 12 tactccctccgtctcaaaataagtgtcttaagcttactacaattttgtactatctctaat 71
||||||||||||| |||||||| ||||| || |||| ||||| |||||||||| ||| |
Sbjct: 101 tactccctccgtcccaaaataactgtctcaaacttaatacaagtttgtactatagctagt 42
Query: 72 acaaagttgagacagttattttgagacggagggactatc 110
| |||||||||||| |||||||| |||||| ||| ||||
Sbjct: 41 ataaagttgagacacttattttgggacggatggagtatc 3
Score = 48.1 bits (24), Expect = 3e-05
Identities = 27/28 (96%)
Strand = Plus / Plus
Query: 78 ttgagacagttattttgagacggaggga 105
||||||||||||||||| ||||||||||
Sbjct: 71 ttgagacagttattttgggacggaggga 98
>RF00906;MIR1122;DQ995510.1/1615-1718 4513:Hordeum vulgare
Length = 104
Score = 85.7 bits (43), Expect = 1e-16
Identities = 83/95 (87%), Gaps = 1/95 (1%)
Strand = Plus / Plus
Query: 11 atactccctccgtctcaaaataagtgtcttaagcttactacaattttgtactatctctaa 70
||||||||||||||||||||||| ||||| || ||| ||||| ||||||||| |||
Sbjct: 4 atactccctccgtctcaaaataactgtctcaa-ctttgtacaactttgtactagagctag 62
Query: 71 tacaaagttgagacagttattttgagacggaggga 105
|||||||||||||||||||||||| || |||||||
Sbjct: 63 tacaaagttgagacagttattttgggatggaggga 97
Score = 69.9 bits (35), Expect = 7e-12
Identities = 35/35 (100%)
Strand = Plus / Minus
Query: 71 tacaaagttgagacagttattttgagacggaggga 105
|||||||||||||||||||||||||||||||||||
Sbjct: 42 tacaaagttgagacagttattttgagacggaggga 8
>RF00906;MIR1122;FJ184990.1/3303-3406 4565:Triticum aestivum (bread
wheat)
Length = 104
Score = 81.8 bits (41), Expect = 2e-15
Identities = 84/97 (86%), Gaps = 1/97 (1%)
Strand = Plus / Plus
Query: 9 ttatactccctccgtctcaaaataagtgtcttaagcttactacaattttgtactatctct 68
|||||||||||||||| |||||||||||||| || |||| ||||||||| ||||| |
Sbjct: 2 ttatactccctccgtcccaaaataagtgtctcaaccttagtacaattttatactagagtt 61
Query: 69 aatacaaagttgagacagttattttgagacggaggga 105
| ||||||| ||||||| |||||||| ||||||||||
Sbjct: 62 agtacaaag-tgagacacttattttgggacggaggga 97
Score = 50.1 bits (25), Expect = 7e-06
Identities = 28/29 (96%)
Strand = Plus / Minus
Query: 11 atactccctccgtctcaaaataagtgtct 39
|||||||||||||| ||||||||||||||
Sbjct: 101 atactccctccgtcccaaaataagtgtct 73
>RF00906;MIR1122;DQ175992.1/50-154 112509:Hordeum vulgare subsp.
vulgare (domesticated barley)
Length = 105
Score = 81.8 bits (41), Expect = 2e-15
Identities = 83/97 (85%)
Strand = Plus / Plus
Query: 9 ttatactccctccgtctcaaaataagtgtcttaagcttactacaattttgtactatctct 68
|||||||| |||||| | ||||||||||||||||||||| || |||||| ||||| ||
Sbjct: 2 ttatactctctccgttttaaaataagtgtcttaagcttagtataattttatactagagct 61
Query: 69 aatacaaagttgagacagttattttgagacggaggga 105
| |||||||| ||||| |||||||| ||||||||||
Sbjct: 62 agaacaaagttaagacaattattttgggacggaggga 98
Score = 46.1 bits (23), Expect = 1e-04
Identities = 29/31 (93%)
Strand = Plus / Minus
Query: 12 tactccctccgtctcaaaataagtgtcttaa 42
||||||||||||| |||||||| ||||||||
Sbjct: 101 tactccctccgtcccaaaataattgtcttaa 71
>RF00906;MIR1122;X83518.1/7301-7197 4513:Hordeum vulgare
Length = 105
Score = 81.8 bits (41), Expect = 2e-15
Identities = 74/85 (87%)
Strand = Plus / Plus
Query: 10 tatactccctccgtctcaaaataagtgtcttaagcttactacaattttgtactatctcta 69
|||||||||||| ||||||||||| ||||| ||||||| ||||| |||||| || |||
Sbjct: 3 tatactccctccatctcaaaataactgtctcaagcttagtacaactttgtagtagagcta 62
Query: 70 atacaaagttgagacagttattttg 94
||||||||||||||| ||||||||
Sbjct: 63 gtacaaagttgagacacttattttg 87
Score = 48.1 bits (24), Expect = 3e-05
Identities = 27/28 (96%)
Strand = Plus / Minus
Query: 78 ttgagacagttattttgagacggaggga 105
|||||||||||||||||||| |||||||
Sbjct: 35 ttgagacagttattttgagatggaggga 8
>RF00906;MIR1122;AF521177.1/206122-206018 4513:Hordeum vulgare
Length = 105
Score = 77.8 bits (39), Expect = 3e-14
Identities = 81/95 (85%)
Strand = Plus / Plus
Query: 11 atactccctccgtctcaaaataagtgtcttaagcttactacaattttgtactatctctaa 70
||||||||||| | ||||||||| ||| | | ||||| ||||| ||||||||| |||
Sbjct: 4 atactccctccatttcaaaataattgtttcatgcttagtacaactttgtactagagctag 63
Query: 71 tacaaagttgagacagttattttgagacggaggga 105
||||||||||||||| ||||||||| |||||||||
Sbjct: 64 tacaaagttgagacatttattttgaaacggaggga 98
>RF00906;MIR1122;AF474373.1/50497-50394 112509:Hordeum vulgare
subsp. vulgare (domesticated barley)
Length = 104
Score = 71.9 bits (36), Expect = 2e-12
Identities = 72/84 (85%)
Strand = Plus / Plus
Query: 11 atactccctccgtctcaaaataagtgtcttaagcttactacaattttgtactatctctaa 70
|||||| ||||||| |||||||| ||||| |||| || ||||| ||||||||| |||
Sbjct: 4 atactcactccgtcccaaaataactgtctcaagcctagtacaactttgtactagaactag 63
Query: 71 tacaaagttgagacagttattttg 94
||||||||||||||| ||||||||
Sbjct: 64 tacaaagttgagacacttattttg 87
>RF00906;MIR1122;AY268139.1/69673-69778 4513:Hordeum vulgare
Length = 106
Score = 69.9 bits (35), Expect = 7e-12
Identities = 81/95 (85%), Gaps = 1/95 (1%)
Strand = Plus / Plus
Query: 10 tatactccctccgtctcaaaataagtgtcttaagcttac-tacaattttgtactatctct 68
|||||||||||||| ||||||||| ||| |||| |||| ||||||||| |||| |
Sbjct: 3 tatactccctccgtttcaaaataactgttttaaacttaaatacaattttatactgaaatt 62
Query: 69 aatacaaagttgagacagttattttgagacggagg 103
|||| |||||| |||||||||||||||||||||||
Sbjct: 63 aatataaagttaagacagttattttgagacggagg 97
Score = 52.0 bits (26), Expect = 2e-06
Identities = 32/34 (94%)
Strand = Plus / Minus
Query: 9 ttatactccctccgtctcaaaataagtgtcttaa 42
||||||| ||||||||||||||||| ||||||||
Sbjct: 105 ttatacttcctccgtctcaaaataactgtcttaa 72
>RF00906;MIR1122;DQ445236.1/13423-13319 112509:Hordeum vulgare
subsp. vulgare (domesticated barley)
Length = 105
Score = 69.9 bits (35), Expect = 7e-12
Identities = 80/95 (84%)
Strand = Plus / Minus
Query: 11 atactccctccgtctcaaaataagtgtcttaagcttactacaattttgtactatctctaa 70
||||||||||||| |||||||| | ||| ||||||| ||||| ||||||||| |||
Sbjct: 102 atactccctccgttccaaaataactatctcaagcttagtacaactttgtactagagctag 43
Query: 71 tacaaagttgagacagttattttgagacggaggga 105
|||||| |||||||| |||||||| |||||||||
Sbjct: 42 tacaaatttgagacacttattttggaacggaggga 8
Score = 46.1 bits (23), Expect = 1e-04
Identities = 29/31 (93%)
Strand = Plus / Plus
Query: 9 ttatactccctccgtctcaaaataagtgtct 39
||||||||||||||| ||||||||||||||
Sbjct: 2 ttatactccctccgttccaaaataagtgtct 32
>RF00906;MIR1122;DQ901436.1/1229-1333 4565:Triticum aestivum (bread
wheat)
Length = 105
Score = 67.9 bits (34), Expect = 3e-11
Identities = 79/94 (84%)
Strand = Plus / Minus
Query: 12 tactccctccgtctcaaaataagtgtcttaagcttactacaattttgtactatctctaat 71
||||| |||| ||||||||||||||||| || || ||||| |||||| || ||| |
Sbjct: 101 tactcactccatctcaaaataagtgtctcaactctagtacaactttgtattaaagctagt 42
Query: 72 acaaagttgagacagttattttgagacggaggga 105
|||||||||||||| |||||||| ||||||||||
Sbjct: 41 acaaagttgagacacttattttgggacggaggga 8
Score = 44.1 bits (22), Expect = 4e-04
Identities = 25/26 (96%)
Strand = Plus / Plus
Query: 14 ctccctccgtctcaaaataagtgtct 39
||||||||||| ||||||||||||||
Sbjct: 7 ctccctccgtcccaaaataagtgtct 32
>RF00906;MIR1122;AJ400714.1/3663-3767 4565:Triticum aestivum (bread
wheat)
Length = 105
Score = 67.9 bits (34), Expect = 3e-11
Identities = 49/54 (90%)
Strand = Plus / Minus
Query: 10 tatactccctccgtctcaaaataagtgtcttaagcttactacaattttgtacta 63
||||||||||||||| |||||||||||||| || |||| ||||| |||||||||
Sbjct: 103 tatactccctccgtcccaaaataagtgtctcaaccttagtacaactttgtacta 50
>RF00906;MIR1122;AK249748.1/2677-2573 112509:Hordeum vulgare subsp.
vulgare (domesticated barley)
Length = 105
Score = 61.9 bits (31), Expect = 2e-09
Identities = 70/83 (84%)
Strand = Plus / Minus
Query: 12 tactccctccgtctcaaaataagtgtcttaagcttactacaattttgtactatctctaat 71
||||||||||||| |||||||| |||||||| |||| || || ||| || || ||| |
Sbjct: 101 tactccctccgtcgcaaaataaatgtcttaaacttagtataaatttatagtaaagctagt 42
Query: 72 acaaagttgagacagttattttg 94
|||||||| ||||||||||||||
Sbjct: 41 acaaagttaagacagttattttg 19
>RF00906;MIR1122;AJ234583.1/157-260 4513:Hordeum vulgare
Length = 104
Score = 60.0 bits (30), Expect = 7e-09
Identities = 79/94 (84%), Gaps = 1/94 (1%)
Strand = Plus / Minus
Query: 12 tactccctccgtctcaaaataagtgtcttaagcttactacaattttgtactatctctaat 71
|||||||||||||||||||||| ||||| ||||||| || || |||| |||| ||| |
Sbjct: 100 tactccctccgtctcaaaataattgtctcaagcttagtataactttgcacta-agctagt 42
Query: 72 acaaagttgagacagttattttgagacggaggga 105
| ||| || ||| | |||||||||||||||||||
Sbjct: 41 ataaaattaagaaacttattttgagacggaggga 8
Score = 56.0 bits (28), Expect = 1e-07
Identities = 31/32 (96%)
Strand = Plus / Plus
Query: 11 atactccctccgtctcaaaataagtgtcttaa 42
||||||||||||||||||||||||| ||||||
Sbjct: 4 atactccctccgtctcaaaataagtttcttaa 35
Score = 48.1 bits (24), Expect = 3e-05
Identities = 27/28 (96%)
Strand = Plus / Plus
Query: 78 ttgagacagttattttgagacggaggga 105
|||||||| |||||||||||||||||||
Sbjct: 70 ttgagacaattattttgagacggaggga 97
>RF00906;MIR1122;EU282771.1/632-528 112509:Hordeum vulgare subsp.
vulgare (domesticated barley)
Length = 105
Score = 60.0 bits (30), Expect = 7e-09
Identities = 78/94 (82%)
Strand = Plus / Plus
Query: 12 tactccctccgtctcaaaataagtgtcttaagcttactacaattttgtactatctctaat 71
||||||||||||| |||||||| | ||| || |||| ||||| ||| ||||| ||| |
Sbjct: 5 tactccctccgtcccaaaataactttctcaaacttagtacaactttatactagagctagt 64
Query: 72 acaaagttgagacagttattttgagacggaggga 105
|||||||||| | |||||||||||||||||||
Sbjct: 65 gtaaagttgagatacttattttgagacggaggga 98
Score = 48.1 bits (24), Expect = 3e-05
Identities = 24/24 (100%)
Strand = Plus / Minus
Query: 12 tactccctccgtctcaaaataagt 35
||||||||||||||||||||||||
Sbjct: 101 tactccctccgtctcaaaataagt 78
>RF00906;MIR1122;AY821694.1/1308-1197 37674:Crithopsis delileana
Length = 112
Score = 56.0 bits (28), Expect = 1e-07
Identities = 61/72 (84%)
Strand = Plus / Plus
Query: 34 gtgtcttaagcttactacaattttgtactatctctaatacaaagttgagacagttatttt 93
||||||| |||||| ||||| ||||||||| || ||||||||||||||| |||||||
Sbjct: 34 gtgtcttgagcttagtacaactttgtactaaagttagtacaaagttgagacacttatttt 93
Query: 94 gagacggaggga 105
| || |||||||
Sbjct: 94 gggatggaggga 105
>RF00906;MIR1122;AF488415.1/78603-78755 4568:Triticum monococcum
Length = 153
Score = 54.0 bits (27), Expect = 4e-07
Identities = 60/71 (84%)
Strand = Plus / Plus
Query: 14 ctccctccgtctcaaaataagtgtcttaagcttactacaattttgtactatctctaatac 73
|||||| |||| |||||||||||||| || |||| ||||| |||| |||| | || |||
Sbjct: 7 ctcccttcgtcccaaaataagtgtctcaaccttagtacaactttgcactaaatttagtac 66
Query: 74 aaagttgagac 84
|||||||||||
Sbjct: 67 aaagttgagac 77
Score = 54.0 bits (27), Expect = 4e-07
Identities = 33/35 (94%)
Strand = Plus / Plus
Query: 71 tacaaagttgagacagttattttgagacggaggga 105
|||||| ||||||||||||||||| ||||||||||
Sbjct: 112 tacaaacttgagacagttattttgggacggaggga 146
Score = 46.1 bits (23), Expect = 1e-04
Identities = 29/31 (93%)
Strand = Plus / Minus
Query: 9 ttatactccctccgtctcaaaataagtgtct 39
|||||||||||||||| |||||||| |||||
Sbjct: 152 ttatactccctccgtcccaaaataactgtct 122
>RF00906;MIR1122;EU282251.1/1314-1209 52152:Elymus repens
Length = 106
Score = 54.0 bits (27), Expect = 4e-07
Identities = 30/31 (96%)
Strand = Plus / Minus
Query: 8 attatactccctccgtctcaaaataagtgtc 38
||||||||||||||||| |||||||||||||
Sbjct: 106 attatactccctccgtcccaaaataagtgtc 76
Score = 46.1 bits (23), Expect = 1e-04
Identities = 26/27 (96%)
Strand = Plus / Plus
Query: 12 tactccctccgtctcaaaataagtgtc 38
||||||||||||| |||||||||||||
Sbjct: 5 tactccctccgtcccaaaataagtgtc 31
>RF00906;MIR1122;EU282768.1/632-528 112509:Hordeum vulgare subsp.
vulgare (domesticated barley)
Length = 105
Score = 52.0 bits (26), Expect = 2e-06
Identities = 77/94 (81%)
Strand = Plus / Plus
Query: 12 tactccctccgtctcaaaataagtgtcttaagcttactacaattttgtactatctctaat 71
||||||||||||| |||||||| | ||| || |||| ||||| ||| ||||| ||| |
Sbjct: 5 tactccctccgtcccaaaataactttctcaaacttagtacaactttatactagagctagt 64
Query: 72 acaaagttgagacagttattttgagacggaggga 105
|||| ||||| | |||||||||||||||||||
Sbjct: 65 gtaaagctgagatacttattttgagacggaggga 98
Score = 48.1 bits (24), Expect = 3e-05
Identities = 24/24 (100%)
Strand = Plus / Minus
Query: 12 tactccctccgtctcaaaataagt 35
||||||||||||||||||||||||
Sbjct: 101 tactccctccgtctcaaaataagt 78
>RF00906;MIR1122;FJ581044.1/175385-175266 4538:Oryza glaberrima
(African rice)
Length = 120
Score = 52.0 bits (26), Expect = 2e-06
Identities = 26/26 (100%)
Strand = Plus / Minus
Query: 10 tatactccctccgtctcaaaataagt 35
||||||||||||||||||||||||||
Sbjct: 118 tatactccctccgtctcaaaataagt 93
>RF00906;MIR1122;AF521177.1/81577-81474 4513:Hordeum vulgare
Length = 104
Score = 50.1 bits (25), Expect = 7e-06
Identities = 28/29 (96%)
Strand = Plus / Minus
Query: 8 attatactccctccgtctcaaaataagtg 36
||||||||||||||||| |||||||||||
Sbjct: 104 attatactccctccgtcccaaaataagtg 76
Score = 46.1 bits (23), Expect = 1e-04
Identities = 32/35 (91%)
Strand = Plus / Plus
Query: 71 tacaaagttgagacagttattttgagacggaggga 105
|||||||||||| || |||||||| ||||||||||
Sbjct: 63 tacaaagttgagtcacttattttgggacggaggga 97
>RF00906;MIR1122;AK249769.1/2180-2285 112509:Hordeum vulgare
subsp. vulgare (domesticated barley)
Length = 106
Score = 50.1 bits (25), Expect = 7e-06
Identities = 28/29 (96%)
Strand = Plus / Plus
Query: 10 tatactccctccgtctcaaaataagtgtc 38
|||||||||||||||| ||||||||||||
Sbjct: 3 tatactccctccgtcttaaaataagtgtc 31
>RF01058;MIR806;AAAA02021561.1/35714-35484 39946:Oryza sativa
Indica Group
Length = 231
Score = 48.1 bits (24), Expect = 3e-05
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 11 atactccctccgtctcaaaataag 34
||||||||||||||||||||||||
Sbjct: 1 atactccctccgtctcaaaataag 24
>RF00906;MIR1122;AB183299.1/312-404 4565:Triticum aestivum (bread
wheat)
Length = 93
Score = 48.1 bits (24), Expect = 3e-05
Identities = 30/32 (93%)
Strand = Plus / Minus
Query: 74 aaagttgagacagttattttgagacggaggga 105
|||||||||||| |||||||| ||||||||||
Sbjct: 39 aaagttgagacacttattttgggacggaggga 8
Score = 44.1 bits (22), Expect = 4e-04
Identities = 25/26 (96%)
Strand = Plus / Plus
Query: 14 ctccctccgtctcaaaataagtgtct 39
||||||||||| ||||||||||||||
Sbjct: 7 ctccctccgtcccaaaataagtgtct 32
Score = 44.1 bits (22), Expect = 4e-04
Identities = 28/30 (93%)
Strand = Plus / Minus
Query: 10 tatactccctccgtctcaaaataagtgtct 39
|||||| |||||||| ||||||||||||||
Sbjct: 91 tatacttcctccgtcccaaaataagtgtct 62
>RF00906;MIR1122;FJ491378.1/4581-4466 4550:Secale cereale (rye)
Length = 116
Score = 48.1 bits (24), Expect = 3e-05
Identities = 27/28 (96%)
Strand = Plus / Minus
Query: 9 ttatactccctccgtctcaaaataagtg 36
|||||||||||||||| |||||||||||
Sbjct: 115 ttatactccctccgtcccaaaataagtg 88
>RF00906;MIR1122;EU282770.1/593-711 112509:Hordeum vulgare subsp.
vulgare (domesticated barley)
Length = 119
Score = 48.1 bits (24), Expect = 3e-05
Identities = 27/28 (96%)
Strand = Plus / Plus
Query: 12 tactccctccgtctcaaaataagtgtct 39
||||||||||||||||||||| ||||||
Sbjct: 5 tactccctccgtctcaaaataggtgtct 32
Score = 48.1 bits (24), Expect = 3e-05
Identities = 30/32 (93%)
Strand = Plus / Minus
Query: 74 aaagttgagacagttattttgagacggaggga 105
|||||||||||| ||||||||||||||||||
Sbjct: 39 aaagttgagacacctattttgagacggaggga 8
>RF00906;MIR1122;AK250735.1/291-376 112509:Hordeum vulgare subsp.
vulgare (domesticated barley)
Length = 86
Score = 48.1 bits (24), Expect = 3e-05
Identities = 27/28 (96%)
Strand = Plus / Plus
Query: 12 tactccctccgtctcaaaataagtgtct 39
||||||||||||| ||||||||||||||
Sbjct: 5 tactccctccgtcccaaaataagtgtct 32
>RF00906;MIR1122;AAAA02019740.1/10862-10702 39946:Oryza sativa
Indica Group
Length = 161
Score = 48.1 bits (24), Expect = 3e-05
Identities = 24/24 (100%)
Strand = Plus / Minus
Query: 9 ttatactccctccgtctcaaaata 32
||||||||||||||||||||||||
Sbjct: 160 ttatactccctccgtctcaaaata 137
>RF00906;MIR1122;U29095.1/333-439 4565:Triticum aestivum (bread
wheat)
Length = 107
Score = 46.1 bits (23), Expect = 1e-04
Identities = 26/27 (96%)
Strand = Plus / Plus
Query: 10 tatactccctccgtctcaaaataagtg 36
||||||||||||||| |||||||||||
Sbjct: 3 tatactccctccgtcccaaaataagtg 29
>RF00906;MIR1122;DQ267106.1/62901-62968 4572:Triticum urartu
Length = 68
Score = 46.1 bits (23), Expect = 1e-04
Identities = 26/27 (96%)
Strand = Plus / Plus
Query: 10 tatactccctccgtctcaaaataagtg 36
||||||||||||||| |||||||||||
Sbjct: 3 tatactccctccgtcccaaaataagtg 29
>RF00906;MIR1122;AK252095.1/1820-1925 112509:Hordeum vulgare
subsp. vulgare (domesticated barley)
Length = 106
Score = 46.1 bits (23), Expect = 1e-04
Identities = 26/27 (96%)
Strand = Plus / Plus
Query: 12 tactccctccgtctcaaaataagtgtc 38
|||||||||||| ||||||||||||||
Sbjct: 5 tactccctccgtatcaaaataagtgtc 31
>RF00906;MIR1122;AF427791.1/40179-40064 4513:Hordeum vulgare
Length = 116
Score = 46.1 bits (23), Expect = 1e-04
Identities = 26/27 (96%)
Strand = Plus / Plus
Query: 10 tatactccctccgtctcaaaataagtg 36
||||||| |||||||||||||||||||
Sbjct: 3 tatactctctccgtctcaaaataagtg 29
>RF00906;MIR1122;FJ374625.1/3001-2870 4573:Aegilops speltoides
Length = 132
Score = 46.1 bits (23), Expect = 1e-04
Identities = 32/35 (91%)
Strand = Plus / Minus
Query: 71 tacaaagttgagacagttattttgagacggaggga 105
|||||||||||| || |||||||| ||||||||||
Sbjct: 42 tacaaagttgagtcacttattttgggacggaggga 8
Score = 44.1 bits (22), Expect = 4e-04
Identities = 25/26 (96%)
Strand = Plus / Plus
Query: 11 atactccctccgtctcaaaataagtg 36
|||||||||||||| |||||||||||
Sbjct: 4 atactccctccgtcccaaaataagtg 29
>RF00906;MIR1122;AAAA02022195.1/27114-27226 39946:Oryza sativa
Indica Group
Length = 113
Score = 46.1 bits (23), Expect = 1e-04
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 11 atactccctccgtctcaaaataa 33
|||||||||||||||||||||||
Sbjct: 4 atactccctccgtctcaaaataa 26
>RF00906;MIR1122;AAAA02000585.1/2941-3070 39946:Oryza sativa Indica
Group
Length = 130
Score = 46.1 bits (23), Expect = 1e-04
Identities = 23/23 (100%)
Strand = Plus / Minus
Query: 10 tatactccctccgtctcaaaata 32
|||||||||||||||||||||||
Sbjct: 128 tatactccctccgtctcaaaata 106
>RF01058;MIR806;AP008208.1/6823788-6823544 39947:Oryza sativa
Japonica Group
Length = 245
Score = 44.1 bits (22), Expect = 4e-04
Identities = 25/26 (96%)
Strand = Plus / Minus
Query: 11 atactccctccgtctcaaaataagtg 36
|||||||||||||| |||||||||||
Sbjct: 245 atactccctccgtcccaaaataagtg 220
>RF01058;MIR806;AL731615.4/103346-103100 39947:Oryza sativa
Japonica Group
Length = 247
Score = 44.1 bits (22), Expect = 4e-04
Identities = 25/26 (96%)
Strand = Plus / Plus
Query: 12 tactccctccgtctcaaaataagtgt 37
||||||||||||| ||||||||||||
Sbjct: 2 tactccctccgtcccaaaataagtgt 27
>RF01058;MIR806;AACV01025022.1/35011-35254 39947:Oryza sativa
Japonica Group
Length = 244
Score = 44.1 bits (22), Expect = 4e-04
Identities = 25/26 (96%)
Strand = Plus / Plus
Query: 11 atactccctccgtctcaaaataagtg 36
|||||||||||||| |||||||||||
Sbjct: 1 atactccctccgtcccaaaataagtg 26
>RF01058;MIR806;AAAA02004537.1/25464-25706 39946:Oryza sativa
Indica Group
Length = 243
Score = 44.1 bits (22), Expect = 4e-04
Identities = 25/26 (96%)
Strand = Plus / Plus
Query: 11 atactccctccgtctcaaaataagtg 36
|||||||||||||| |||||||||||
Sbjct: 1 atactccctccgtcccaaaataagtg 26
>RF01058;MIR806;AAAA02009876.1/3121-2881 39946:Oryza sativa Indica
Group
Length = 241
Score = 44.1 bits (22), Expect = 4e-04
Identities = 25/26 (96%)
Strand = Plus / Minus
Query: 11 atactccctccgtctcaaaataagtg 36
|||||||||||||| |||||||||||
Sbjct: 241 atactccctccgtcccaaaataagtg 216
>RF00906;MIR1122;AC174352.7/5727-5571 3880:Medicago truncatula
(barrel medic)
Length = 157
Score = 44.1 bits (22), Expect = 4e-04
Identities = 22/22 (100%)
Strand = Plus / Minus
Query: 11 atactccctccgtctcaaaata 32
||||||||||||||||||||||
Sbjct: 154 atactccctccgtctcaaaata 133
>RF00906;MIR1122;D30809.1/4836-4921 4565:Triticum aestivum (bread
wheat)
Length = 86
Score = 44.1 bits (22), Expect = 4e-04
Identities = 28/30 (93%)
Strand = Plus / Minus
Query: 9 ttatactccctccgtctcaaaataagtgtc 38
|||||||||| ||||| |||||||||||||
Sbjct: 85 ttatactcccaccgtcccaaaataagtgtc 56
>RF00906;MIR1122;AP008214.1/14410723-14410632 39947:Oryza sativa
Japonica Group
Length = 92
Score = 44.1 bits (22), Expect = 4e-04
Identities = 25/26 (96%)
Strand = Plus / Plus
Query: 11 atactccctccgtctcaaaataagtg 36
|||||||||||||| |||||||||||
Sbjct: 4 atactccctccgtcccaaaataagtg 29
>RF00906;MIR1122;AC130607.2/121928-122037 39947:Oryza sativa
Japonica Group
Length = 110
Score = 44.1 bits (22), Expect = 4e-04
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 10 tatactccctccgtctcaaaat 31
||||||||||||||||||||||
Sbjct: 3 tatactccctccgtctcaaaat 24
>RF00906;MIR1122;AAAA02026943.1/18413-18317 39946:Oryza sativa
Indica Group
Length = 97
Score = 44.1 bits (22), Expect = 4e-04
Identities = 22/22 (100%)
Strand = Plus / Minus
Query: 12 tactccctccgtctcaaaataa 33
||||||||||||||||||||||
Sbjct: 93 tactccctccgtctcaaaataa 72
