miRNEST 2.0, an integrative microRNA resource :: BLAST
BLASTN 2.2.20 [Feb-08-2009]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
>40401_ahy-MIR167:mirbase
Length = 118
Score = 228 bits (115), Expect = 7e-61
Identities = 115/115 (100%)
Strand = Plus / Plus
Query: 1 gatcatgcaccactacaagttgaagctgccagcatgatcttaactttccctctcctatga 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 gatcatgcaccactacaagttgaagctgccagcatgatcttaactttccctctcctatga 60
Query: 61 tttgttggggtgagatcagatcatgtggcagtttcacctagttgttggaagcatg 115
|||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 tttgttggggtgagatcagatcatgtggcagtttcacctagttgttggaagcatg 115
>40400_ahy-MIR167:mirbase
Length = 118
Score = 228 bits (115), Expect = 7e-61
Identities = 115/115 (100%)
Strand = Plus / Plus
Query: 1 gatcatgcaccactacaagttgaagctgccagcatgatcttaactttccctctcctatga 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 gatcatgcaccactacaagttgaagctgccagcatgatcttaactttccctctcctatga 60
Query: 61 tttgttggggtgagatcagatcatgtggcagtttcacctagttgttggaagcatg 115
|||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 tttgttggggtgagatcagatcatgtggcagtttcacctagttgttggaagcatg 115
>40446_gma-MIR167f:mirbase
Length = 109
Score = 85.7 bits (43), Expect = 7e-18
Identities = 90/105 (85%), Gaps = 8/105 (7%)
Strand = Plus / Plus
Query: 3 tcatgcaccactacaagttgaagctgccagcatgatcttaactttccctctcctatgatt 62
|||||||||||||| ||||||||||||||||||||||||||| ||||||| | |
Sbjct: 1 tcatgcaccactaccagttgaagctgccagcatgatcttaac-ttccctc-------act 52
Query: 63 tgttggggtgagatcagatcatgtggcagtttcacctagttgttg 107
|| || || |||||||||||||||||||||||||||||| ||||
Sbjct: 53 tgctgtggaaagatcagatcatgtggcagtttcacctagtagttg 97
>40445_gma-MIR167e:mirbase
Length = 109
Score = 79.8 bits (40), Expect = 4e-16
Identities = 43/44 (97%)
Strand = Plus / Plus
Query: 3 tcatgcaccactacaagttgaagctgccagcatgatcttaactt 46
|||||||||||||| |||||||||||||||||||||||||||||
Sbjct: 1 tcatgcaccactaccagttgaagctgccagcatgatcttaactt 44
>41228_csi-MIR167b:mirbase
Length = 123
Score = 61.9 bits (31), Expect = 9e-11
Identities = 40/43 (93%)
Strand = Plus / Plus
Query: 7 gcaccactacaagttgaagctgccagcatgatcttaactttcc 49
||||||||| || |||||||||||||||||||||||||||||
Sbjct: 6 gcaccactatcagatgaagctgccagcatgatcttaactttcc 48
>41595_vvi-MIR167e:mirbase
Length = 90
Score = 58.0 bits (29), Expect = 1e-09
Identities = 36/37 (97%), Gaps = 1/37 (2%)
Strand = Plus / Plus
Query: 72 gagatcagatcatgtggcagtttcacctagttgttgg 108
|||||||||||||||||||||||||||| ||||||||
Sbjct: 54 gagatcagatcatgtggcagtttcacct-gttgttgg 89
Score = 50.1 bits (25), Expect = 4e-07
Identities = 28/29 (96%)
Strand = Plus / Plus
Query: 18 agttgaagctgccagcatgatcttaactt 46
||||||||||||||||||||||| |||||
Sbjct: 8 agttgaagctgccagcatgatctaaactt 36
>41533_sly-MIR167:mirbase
Length = 116
Score = 56.0 bits (28), Expect = 6e-09
Identities = 31/32 (96%)
Strand = Plus / Plus
Query: 18 agttgaagctgccagcatgatcttaactttcc 49
||||||||||||||||||||||| ||||||||
Sbjct: 16 agttgaagctgccagcatgatctaaactttcc 47
>41343_ptc-MIR167e:mirbase
Length = 91
Score = 56.0 bits (28), Expect = 6e-09
Identities = 31/32 (96%)
Strand = Plus / Plus
Query: 18 agttgaagctgccagcatgatcttaactttcc 49
||||||||||||||||||||||| ||||||||
Sbjct: 8 agttgaagctgccagcatgatctgaactttcc 39
>41280_ctr-MIR167:mirbase
Length = 121
Score = 56.0 bits (28), Expect = 6e-09
Identities = 31/32 (96%)
Strand = Plus / Plus
Query: 18 agttgaagctgccagcatgatcttaactttcc 49
||||||||||||||||||||||| ||||||||
Sbjct: 21 agttgaagctgccagcatgatctgaactttcc 52
Score = 40.1 bits (20), Expect = 3e-04
Identities = 23/24 (95%)
Strand = Plus / Plus
Query: 77 cagatcatgtggcagtttcaccta 100
|||||||| |||||||||||||||
Sbjct: 78 cagatcatctggcagtttcaccta 101
>41227_csi-MIR167a:mirbase
Length = 103
Score = 56.0 bits (28), Expect = 6e-09
Identities = 31/32 (96%)
Strand = Plus / Plus
Query: 18 agttgaagctgccagcatgatcttaactttcc 49
||||||||||||||||||||||| ||||||||
Sbjct: 12 agttgaagctgccagcatgatctgaactttcc 43
Score = 40.1 bits (20), Expect = 3e-04
Identities = 23/24 (95%)
Strand = Plus / Plus
Query: 77 cagatcatgtggcagtttcaccta 100
|||||||| |||||||||||||||
Sbjct: 69 cagatcatctggcagtttcaccta 92
>41209_ccl-MIR167b:mirbase
Length = 202
Score = 56.0 bits (28), Expect = 6e-09
Identities = 31/32 (96%)
Strand = Plus / Plus
Query: 18 agttgaagctgccagcatgatcttaactttcc 49
||||||||||||||||||||||| ||||||||
Sbjct: 18 agttgaagctgccagcatgatctgaactttcc 49
Score = 40.1 bits (20), Expect = 3e-04
Identities = 23/24 (95%)
Strand = Plus / Plus
Query: 77 cagatcatgtggcagtttcaccta 100
|||||||| |||||||||||||||
Sbjct: 75 cagatcatctggcagtttcaccta 98
>41208_ccl-MIR167a:mirbase
Length = 121
Score = 56.0 bits (28), Expect = 6e-09
Identities = 31/32 (96%)
Strand = Plus / Plus
Query: 18 agttgaagctgccagcatgatcttaactttcc 49
||||||||||||||||||||||| ||||||||
Sbjct: 21 agttgaagctgccagcatgatctgaactttcc 52
Score = 40.1 bits (20), Expect = 3e-04
Identities = 23/24 (95%)
Strand = Plus / Plus
Query: 77 cagatcatgtggcagtttcaccta 100
|||||||| |||||||||||||||
Sbjct: 78 cagatcatctggcagtttcaccta 101
>41100_tcc-MIR167c:mirbase
Length = 112
Score = 56.0 bits (28), Expect = 6e-09
Identities = 31/32 (96%)
Strand = Plus / Plus
Query: 18 agttgaagctgccagcatgatcttaactttcc 49
|||||||||||||||||||||||||| |||||
Sbjct: 18 agttgaagctgccagcatgatcttaattttcc 49
Score = 46.1 bits (23), Expect = 6e-06
Identities = 26/27 (96%)
Strand = Plus / Plus
Query: 73 agatcagatcatgtggcagtttcacct 99
|||||||||||| ||||||||||||||
Sbjct: 67 agatcagatcatatggcagtttcacct 93
>41345_ptc-MIR167g:mirbase
Length = 86
Score = 54.0 bits (27), Expect = 2e-08
Identities = 27/27 (100%)
Strand = Plus / Plus
Query: 18 agttgaagctgccagcatgatcttaac 44
|||||||||||||||||||||||||||
Sbjct: 8 agttgaagctgccagcatgatcttaac 34
Score = 46.1 bits (23), Expect = 6e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 77 cagatcatgtggcagtttcacct 99
|||||||||||||||||||||||
Sbjct: 59 cagatcatgtggcagtttcacct 81
>40353_rco-MIR167b:mirbase
Length = 80
Score = 54.0 bits (27), Expect = 2e-08
Identities = 27/27 (100%)
Strand = Plus / Plus
Query: 72 gagatcagatcatgtggcagtttcacc 98
|||||||||||||||||||||||||||
Sbjct: 49 gagatcagatcatgtggcagtttcacc 75
Score = 46.1 bits (23), Expect = 6e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 18 agttgaagctgccagcatgatct 40
|||||||||||||||||||||||
Sbjct: 3 agttgaagctgccagcatgatct 25
>41593_vvi-MIR167c:mirbase
Length = 91
Score = 50.1 bits (25), Expect = 4e-07
Identities = 28/29 (96%)
Strand = Plus / Plus
Query: 18 agttgaagctgccagcatgatcttaactt 46
||||||||||||||||||||||| |||||
Sbjct: 8 agttgaagctgccagcatgatctcaactt 36
>41344_ptc-MIR167f:mirbase
Length = 87
Score = 50.1 bits (25), Expect = 4e-07
Identities = 25/25 (100%)
Strand = Plus / Plus
Query: 18 agttgaagctgccagcatgatctta 42
|||||||||||||||||||||||||
Sbjct: 8 agttgaagctgccagcatgatctta 32
Score = 46.1 bits (23), Expect = 6e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 77 cagatcatgtggcagtttcacct 99
|||||||||||||||||||||||
Sbjct: 60 cagatcatgtggcagtttcacct 82
>41098_tcc-MIR167a:mirbase
Length = 111
Score = 50.1 bits (25), Expect = 4e-07
Identities = 28/29 (96%)
Strand = Plus / Plus
Query: 18 agttgaagctgccagcatgatcttaactt 46
||||||||||||||||||||||| |||||
Sbjct: 18 agttgaagctgccagcatgatctaaactt 46
>41592_vvi-MIR167b:mirbase
Length = 99
Score = 46.1 bits (23), Expect = 6e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 18 agttgaagctgccagcatgatct 40
|||||||||||||||||||||||
Sbjct: 8 agttgaagctgccagcatgatct 30
Score = 44.1 bits (22), Expect = 2e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 78 agatcatgtggcagtttcacct 99
||||||||||||||||||||||
Sbjct: 69 agatcatgtggcagtttcacct 90
>41346_ptc-MIR167h:mirbase
Length = 91
Score = 46.1 bits (23), Expect = 6e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 78 agatcatgtggcagtttcaccta 100
|||||||||||||||||||||||
Sbjct: 65 agatcatgtggcagtttcaccta 87
Score = 40.1 bits (20), Expect = 3e-04
Identities = 29/32 (90%)
Strand = Plus / Plus
Query: 18 agttgaagctgccagcatgatcttaactttcc 49
|||||||||||||| |||||||| | ||||||
Sbjct: 8 agttgaagctgccaacatgatctgagctttcc 39
>41341_ptc-MIR167c:mirbase
Length = 89
Score = 46.1 bits (23), Expect = 6e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 18 agttgaagctgccagcatgatct 40
|||||||||||||||||||||||
Sbjct: 8 agttgaagctgccagcatgatct 30
>41339_ptc-MIR167a:mirbase
Length = 89
Score = 46.1 bits (23), Expect = 6e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 18 agttgaagctgccagcatgatct 40
|||||||||||||||||||||||
Sbjct: 8 agttgaagctgccagcatgatct 30
>40645_lja-MIR167:mirbase
Length = 108
Score = 46.1 bits (23), Expect = 6e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 18 agttgaagctgccagcatgatct 40
|||||||||||||||||||||||
Sbjct: 18 agttgaagctgccagcatgatct 40
>40632_gso-MIR167a:mirbase
Length = 80
Score = 46.1 bits (23), Expect = 6e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 18 agttgaagctgccagcatgatct 40
|||||||||||||||||||||||
Sbjct: 6 agttgaagctgccagcatgatct 28
>40447_gma-MIR167g:mirbase
Length = 78
Score = 46.1 bits (23), Expect = 6e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 18 agttgaagctgccagcatgatct 40
|||||||||||||||||||||||
Sbjct: 5 agttgaagctgccagcatgatct 27
>40354_rco-MIR167c:mirbase
Length = 76
Score = 46.1 bits (23), Expect = 6e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 18 agttgaagctgccagcatgatct 40
|||||||||||||||||||||||
Sbjct: 3 agttgaagctgccagcatgatct 25
Score = 44.1 bits (22), Expect = 2e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 78 agatcatgtggcagtttcacct 99
||||||||||||||||||||||
Sbjct: 51 agatcatgtggcagtttcacct 72
>42738_zma-MIR167h:mirbase
Length = 143
Score = 44.1 bits (22), Expect = 2e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 19 gttgaagctgccagcatgatct 40
||||||||||||||||||||||
Sbjct: 19 gttgaagctgccagcatgatct 40
>42521_sbi-MIR167c:mirbase
Length = 131
Score = 44.1 bits (22), Expect = 2e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 19 gttgaagctgccagcatgatct 40
||||||||||||||||||||||
Sbjct: 18 gttgaagctgccagcatgatct 39
>41752_bdi-MIR167d:mirbase
Length = 204
Score = 44.1 bits (22), Expect = 2e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 19 gttgaagctgccagcatgatct 40
||||||||||||||||||||||
Sbjct: 29 gttgaagctgccagcatgatct 50
>41591_vvi-MIR167a:mirbase
Length = 351
Score = 44.1 bits (22), Expect = 2e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 19 gttgaagctgccagcatgatct 40
||||||||||||||||||||||
Sbjct: 9 gttgaagctgccagcatgatct 30
>40443_gma-MIR167c:mirbase
Length = 375
Score = 44.1 bits (22), Expect = 2e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 19 gttgaagctgccagcatgatct 40
||||||||||||||||||||||
Sbjct: 9 gttgaagctgccagcatgatct 30
>42740_zma-MIR167j:mirbase
Length = 109
Score = 42.1 bits (21), Expect = 9e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 76 tcagatcatgtggcagtttca 96
|||||||||||||||||||||
Sbjct: 86 tcagatcatgtggcagtttca 106
Score = 40.1 bits (20), Expect = 3e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 21 tgaagctgccagcatgatct 40
||||||||||||||||||||
Sbjct: 2 tgaagctgccagcatgatct 21
>42739_zma-MIR167i:mirbase
Length = 130
Score = 42.1 bits (21), Expect = 9e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 20 ttgaagctgccagcatgatct 40
|||||||||||||||||||||
Sbjct: 20 ttgaagctgccagcatgatct 40
>41229_csi-MIR167c:mirbase
Length = 341
Score = 42.1 bits (21), Expect = 9e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 20 ttgaagctgccagcatgatct 40
|||||||||||||||||||||
Sbjct: 10 ttgaagctgccagcatgatct 30
>42737_zma-MIR167g:mirbase
Length = 243
Score = 40.1 bits (20), Expect = 3e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 21 tgaagctgccagcatgatct 40
||||||||||||||||||||
Sbjct: 21 tgaagctgccagcatgatct 40
>42736_zma-MIR167f:mirbase
Length = 119
Score = 40.1 bits (20), Expect = 3e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 21 tgaagctgccagcatgatct 40
||||||||||||||||||||
Sbjct: 21 tgaagctgccagcatgatct 40
>42735_zma-MIR167e:mirbase
Length = 119
Score = 40.1 bits (20), Expect = 3e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 21 tgaagctgccagcatgatct 40
||||||||||||||||||||
Sbjct: 21 tgaagctgccagcatgatct 40
>42734_zma-MIR167d:mirbase
Length = 133
Score = 40.1 bits (20), Expect = 3e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 21 tgaagctgccagcatgatct 40
||||||||||||||||||||
Sbjct: 17 tgaagctgccagcatgatct 36
