miRNEST 2.0, an integrative microRNA resource :: BLAST
>41215_crt-MIR168:mirbase
Length = 201
Score = 75.8 bits (38), Expect = 8e-15
Identities = 38/38 (100%)
Strand = Plus / Plus
Query: 11 cggcggtctctaattcgcttggtgcaggtcgggaactg 48
||||||||||||||||||||||||||||||||||||||
Sbjct: 7 cggcggtctctaattcgcttggtgcaggtcgggaactg 44
Score = 58.0 bits (29), Expect = 2e-09
Identities = 35/37 (94%)
Strand = Plus / Plus
Query: 101 tcccgccttgcatcaactgaatcggagcccgcggtga 137
||||||||||||||||||||||||||| ||| |||||
Sbjct: 142 tcccgccttgcatcaactgaatcggagaccgaggtga 178
>41210_ccl-MIR168:mirbase
Length = 176
Score = 75.8 bits (38), Expect = 8e-15
Identities = 38/38 (100%)
Strand = Plus / Plus
Query: 11 cggcggtctctaattcgcttggtgcaggtcgggaactg 48
||||||||||||||||||||||||||||||||||||||
Sbjct: 6 cggcggtctctaattcgcttggtgcaggtcgggaactg 43
Score = 56.0 bits (28), Expect = 7e-09
Identities = 34/36 (94%)
Strand = Plus / Plus
Query: 101 tcccgccttgcatcaactgaatcggagcccgcggtg 136
||||||||||||||||||||||||||| ||| ||||
Sbjct: 141 tcccgccttgcatcaactgaatcggagaccgaggtg 176
>41101_tcc-MIR168:mirbase
Length = 167
Score = 75.8 bits (38), Expect = 8e-15
Identities = 38/38 (100%)
Strand = Plus / Plus
Query: 11 cggcggtctctaattcgcttggtgcaggtcgggaactg 48
||||||||||||||||||||||||||||||||||||||
Sbjct: 7 cggcggtctctaattcgcttggtgcaggtcgggaactg 44
Score = 65.9 bits (33), Expect = 8e-12
Identities = 36/37 (97%)
Strand = Plus / Plus
Query: 101 tcccgccttgcatcaactgaatcggagcccgcggtga 137
||||||||||||||||||||||||||| |||||||||
Sbjct: 126 tcccgccttgcatcaactgaatcggagaccgcggtga 162
>41348_ptc-MIR168b:mirbase
Length = 136
Score = 67.9 bits (34), Expect = 2e-12
Identities = 34/34 (100%)
Strand = Plus / Plus
Query: 15 ggtctctaattcgcttggtgcaggtcgggaactg 48
||||||||||||||||||||||||||||||||||
Sbjct: 1 ggtctctaattcgcttggtgcaggtcgggaactg 34
Score = 54.0 bits (27), Expect = 3e-08
Identities = 27/27 (100%)
Strand = Plus / Plus
Query: 101 tcccgccttgcatcaactgaatcggag 127
|||||||||||||||||||||||||||
Sbjct: 109 tcccgccttgcatcaactgaatcggag 135
>40448_gma-MIR168:mirbase
Length = 125
Score = 67.9 bits (34), Expect = 2e-12
Identities = 34/34 (100%)
Strand = Plus / Plus
Query: 13 gcggtctctaattcgcttggtgcaggtcgggaac 46
||||||||||||||||||||||||||||||||||
Sbjct: 7 gcggtctctaattcgcttggtgcaggtcgggaac 40
Score = 67.9 bits (34), Expect = 2e-12
Identities = 37/38 (97%)
Strand = Plus / Plus
Query: 101 tcccgccttgcatcaactgaatcggagcccgcggtgaa 138
||||||||||||||||||||||||||| ||||||||||
Sbjct: 87 tcccgccttgcatcaactgaatcggaggccgcggtgaa 124
>41596_vvi-MIR168:mirbase
Length = 132
Score = 63.9 bits (32), Expect = 3e-11
Identities = 32/32 (100%)
Strand = Plus / Plus
Query: 15 ggtctctaattcgcttggtgcaggtcgggaac 46
||||||||||||||||||||||||||||||||
Sbjct: 1 ggtctctaattcgcttggtgcaggtcgggaac 32
Score = 54.0 bits (27), Expect = 3e-08
Identities = 27/27 (100%)
Strand = Plus / Plus
Query: 101 tcccgccttgcatcaactgaatcggag 127
|||||||||||||||||||||||||||
Sbjct: 101 tcccgccttgcatcaactgaatcggag 127
>41347_ptc-MIR168a:mirbase
Length = 160
Score = 60.0 bits (30), Expect = 5e-10
Identities = 33/34 (97%)
Strand = Plus / Plus
Query: 15 ggtctctaattcgcttggtgcaggtcgggaactg 48
||||||| ||||||||||||||||||||||||||
Sbjct: 1 ggtctctgattcgcttggtgcaggtcgggaactg 34
Score = 54.0 bits (27), Expect = 3e-08
Identities = 27/27 (100%)
Strand = Plus / Plus
Query: 101 tcccgccttgcatcaactgaatcggag 127
|||||||||||||||||||||||||||
Sbjct: 133 tcccgccttgcatcaactgaatcggag 159
>40044_ath-MIR168b:mirbase
Length = 124
Score = 60.0 bits (30), Expect = 5e-10
Identities = 36/38 (94%)
Strand = Plus / Plus
Query: 11 cggcggtctctaattcgcttggtgcaggtcgggaactg 48
|||||||||| ||||||||||||||||||||||||||
Sbjct: 5 cggcggtctcggattcgcttggtgcaggtcgggaactg 42
Score = 48.1 bits (24), Expect = 2e-06
Identities = 36/40 (90%)
Strand = Plus / Plus
Query: 98 agctcccgccttgcatcaactgaatcggagcccgcggtga 137
|||||||| |||| |||||||||||||||| ||| |||||
Sbjct: 85 agctcccgtcttgtatcaactgaatcggagtccgaggtga 124
>39833_aly-MIR168b:mirbase
Length = 176
Score = 60.0 bits (30), Expect = 5e-10
Identities = 36/38 (94%)
Strand = Plus / Plus
Query: 11 cggcggtctctaattcgcttggtgcaggtcgggaactg 48
|||||||||| ||||||||||||||||||||||||||
Sbjct: 29 cggcggtctcggattcgcttggtgcaggtcgggaactg 66
Score = 44.1 bits (22), Expect = 3e-05
Identities = 34/38 (89%)
Strand = Plus / Plus
Query: 101 tcccgccttgcatcaactgaatcggagcccgcggtgaa 138
||||| |||| |||||||||||||||| ||| ||||||
Sbjct: 112 tcccgtcttgtatcaactgaatcggagtccgaggtgaa 149
>40355_rco-MIR168:mirbase
Length = 131
Score = 58.0 bits (29), Expect = 2e-09
Identities = 29/29 (100%)
Strand = Plus / Plus
Query: 20 ctaattcgcttggtgcaggtcgggaactg 48
|||||||||||||||||||||||||||||
Sbjct: 1 ctaattcgcttggtgcaggtcgggaactg 29
Score = 48.1 bits (24), Expect = 2e-06
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 101 tcccgccttgcatcaactgaatcg 124
||||||||||||||||||||||||
Sbjct: 105 tcccgccttgcatcaactgaatcg 128
>40271_bna-MIR168:mirbase
Length = 133
Score = 52.0 bits (26), Expect = 1e-07
Identities = 35/38 (92%)
Strand = Plus / Plus
Query: 11 cggcggtctctaattcgcttggtgcaggtcgggaactg 48
|||||| |||| | ||||||||||||||||||||||||
Sbjct: 4 cggcggcctctgactcgcttggtgcaggtcgggaactg 41
>40043_ath-MIR168a:mirbase
Length = 138
Score = 52.0 bits (26), Expect = 1e-07
Identities = 26/26 (100%)
Strand = Plus / Plus
Query: 101 tcccgccttgcatcaactgaatcgga 126
||||||||||||||||||||||||||
Sbjct: 102 tcccgccttgcatcaactgaatcgga 127
Score = 48.1 bits (24), Expect = 2e-06
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 23 attcgcttggtgcaggtcgggaac 46
||||||||||||||||||||||||
Sbjct: 16 attcgcttggtgcaggtcgggaac 39
>39832_aly-MIR168a:mirbase
Length = 155
Score = 52.0 bits (26), Expect = 1e-07
Identities = 26/26 (100%)
Strand = Plus / Plus
Query: 101 tcccgccttgcatcaactgaatcgga 126
||||||||||||||||||||||||||
Sbjct: 108 tcccgccttgcatcaactgaatcgga 133
Score = 48.1 bits (24), Expect = 2e-06
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 23 attcgcttggtgcaggtcgggaac 46
||||||||||||||||||||||||
Sbjct: 22 attcgcttggtgcaggtcgggaac 45
>42742_zma-MIR168b:mirbase
Length = 104
Score = 50.1 bits (25), Expect = 5e-07
Identities = 28/29 (96%)
Strand = Plus / Plus
Query: 101 tcccgccttgcatcaactgaatcggagcc 129
|||||||||||||||| ||||||||||||
Sbjct: 66 tcccgccttgcatcaagtgaatcggagcc 94
>42741_zma-MIR168a:mirbase
Length = 104
Score = 44.1 bits (22), Expect = 3e-05
Identities = 31/34 (91%)
Strand = Plus / Plus
Query: 101 tcccgccttgcatcaactgaatcggagcccgcgg 134
|||||||||||| ||| |||||||||||| ||||
Sbjct: 66 tcccgccttgcaccaagtgaatcggagccggcgg 99
>42528_sbi-MIR168:mirbase
Length = 106
Score = 44.1 bits (22), Expect = 3e-05
Identities = 28/30 (93%)
Strand = Plus / Plus
Query: 25 tcgcttggtgcaggtcgggaactgccgccg 54
||||||||||||| |||||| |||||||||
Sbjct: 21 tcgcttggtgcagatcgggacctgccgccg 50
>42470_ssp-MIR168a:mirbase
Length = 99
Score = 42.1 bits (21), Expect = 1e-04
Identities = 27/29 (93%)
Strand = Plus / Plus
Query: 101 tcccgccttgcatcaactgaatcggagcc 129
|||||||||||| ||| ||||||||||||
Sbjct: 63 tcccgccttgcaccaagtgaatcggagcc 91
>42460_sof-MIR168b:mirbase
Length = 103
Score = 42.1 bits (21), Expect = 1e-04
Identities = 27/29 (93%)
Strand = Plus / Plus
Query: 101 tcccgccttgcatcaactgaatcggagcc 129
|||||||||||| ||| ||||||||||||
Sbjct: 65 tcccgccttgcaccaagtgaatcggagcc 93
>42459_sof-MIR168a:mirbase
Length = 104
Score = 42.1 bits (21), Expect = 1e-04
Identities = 27/29 (93%)
Strand = Plus / Plus
Query: 101 tcccgccttgcatcaactgaatcggagcc 129
|||||||||||| ||| ||||||||||||
Sbjct: 66 tcccgccttgcaccaagtgaatcggagcc 94
>41962_osa-MIR168a:mirbase
Length = 87
Score = 42.1 bits (21), Expect = 1e-04
Identities = 30/33 (90%)
Strand = Plus / Plus
Query: 25 tcgcttggtgcaggtcgggaactgccgccgccg 57
||||||||||||| |||||| | ||||||||||
Sbjct: 11 tcgcttggtgcagatcgggacccgccgccgccg 43
Score = 42.1 bits (21), Expect = 1e-04
Identities = 27/29 (93%)
Strand = Plus / Plus
Query: 101 tcccgccttgcatcaactgaatcggagcc 129
|||||||||||| ||| ||||||||||||
Sbjct: 58 tcccgccttgcaccaagtgaatcggagcc 86
>41961_osa-MIR168a:mirbase
Length = 87
Score = 42.1 bits (21), Expect = 1e-04
Identities = 30/33 (90%)
Strand = Plus / Plus
Query: 25 tcgcttggtgcaggtcgggaactgccgccgccg 57
||||||||||||| |||||| | ||||||||||
Sbjct: 11 tcgcttggtgcagatcgggacccgccgccgccg 43
Score = 42.1 bits (21), Expect = 1e-04
Identities = 27/29 (93%)
Strand = Plus / Plus
Query: 101 tcccgccttgcatcaactgaatcggagcc 129
|||||||||||| ||| ||||||||||||
Sbjct: 58 tcccgccttgcaccaagtgaatcggagcc 86
>41888_hvu-MIR168:mirbase
Length = 106
Score = 42.1 bits (21), Expect = 1e-04
Identities = 27/29 (93%)
Strand = Plus / Plus
Query: 101 tcccgccttgcatcaactgaatcggagcc 129
|||||||||||| ||| ||||||||||||
Sbjct: 69 tcccgccttgcaccaagtgaatcggagcc 97
>41887_hvu-MIR168:mirbase
Length = 106
Score = 42.1 bits (21), Expect = 1e-04
Identities = 27/29 (93%)
Strand = Plus / Plus
Query: 101 tcccgccttgcatcaactgaatcggagcc 129
|||||||||||| ||| ||||||||||||
Sbjct: 69 tcccgccttgcaccaagtgaatcggagcc 97
>41753_bdi-MIR168:mirbase
Length = 136
Score = 42.1 bits (21), Expect = 1e-04
Identities = 27/29 (93%)
Strand = Plus / Plus
Query: 101 tcccgccttgcatcaactgaatcggagcc 129
|||||||||||| ||| ||||||||||||
Sbjct: 78 tcccgccttgcaccaagtgaatcggagcc 106
