miRNEST 2.0, an integrative microRNA resource :: BLAST
>54388_rco-miR168:pmrd
Length = 156
Score = 75.8 bits (38), Expect = 8e-15
Identities = 38/38 (100%)
Strand = Plus / Plus
Query: 12 cggcggtctctaattcgcttggtgcaggtcgggaactg 49
||||||||||||||||||||||||||||||||||||||
Sbjct: 5 cggcggtctctaattcgcttggtgcaggtcgggaactg 42
Score = 52.0 bits (26), Expect = 1e-07
Identities = 35/38 (92%)
Strand = Plus / Plus
Query: 102 tcccgccttgcatcaactgaatcggagcccgcggtgaa 139
|||||||||||||||||||||||| || ||| ||||||
Sbjct: 118 tcccgccttgcatcaactgaatcgaagaccggggtgaa 155
>51651_ptc-miR168b:pmrd
Length = 136
Score = 67.9 bits (34), Expect = 2e-12
Identities = 34/34 (100%)
Strand = Plus / Plus
Query: 16 ggtctctaattcgcttggtgcaggtcgggaactg 49
||||||||||||||||||||||||||||||||||
Sbjct: 1 ggtctctaattcgcttggtgcaggtcgggaactg 34
Score = 54.0 bits (27), Expect = 3e-08
Identities = 27/27 (100%)
Strand = Plus / Plus
Query: 102 tcccgccttgcatcaactgaatcggag 128
|||||||||||||||||||||||||||
Sbjct: 109 tcccgccttgcatcaactgaatcggag 135
>48560_gma-miR168:pmrd
Length = 125
Score = 67.9 bits (34), Expect = 2e-12
Identities = 34/34 (100%)
Strand = Plus / Plus
Query: 14 gcggtctctaattcgcttggtgcaggtcgggaac 47
||||||||||||||||||||||||||||||||||
Sbjct: 7 gcggtctctaattcgcttggtgcaggtcgggaac 40
Score = 67.9 bits (34), Expect = 2e-12
Identities = 37/38 (97%)
Strand = Plus / Plus
Query: 102 tcccgccttgcatcaactgaatcggagcccgcggtgaa 139
||||||||||||||||||||||||||| ||||||||||
Sbjct: 87 tcccgccttgcatcaactgaatcggaggccgcggtgaa 124
>54802_vvi-miR168:pmrd
Length = 132
Score = 63.9 bits (32), Expect = 3e-11
Identities = 32/32 (100%)
Strand = Plus / Plus
Query: 16 ggtctctaattcgcttggtgcaggtcgggaac 47
||||||||||||||||||||||||||||||||
Sbjct: 1 ggtctctaattcgcttggtgcaggtcgggaac 32
Score = 54.0 bits (27), Expect = 3e-08
Identities = 27/27 (100%)
Strand = Plus / Plus
Query: 102 tcccgccttgcatcaactgaatcggag 128
|||||||||||||||||||||||||||
Sbjct: 101 tcccgccttgcatcaactgaatcggag 127
>51650_ptc-miR168a:pmrd
Length = 160
Score = 60.0 bits (30), Expect = 5e-10
Identities = 33/34 (97%)
Strand = Plus / Plus
Query: 16 ggtctctaattcgcttggtgcaggtcgggaactg 49
||||||| ||||||||||||||||||||||||||
Sbjct: 1 ggtctctgattcgcttggtgcaggtcgggaactg 34
Score = 54.0 bits (27), Expect = 3e-08
Identities = 27/27 (100%)
Strand = Plus / Plus
Query: 102 tcccgccttgcatcaactgaatcggag 128
|||||||||||||||||||||||||||
Sbjct: 133 tcccgccttgcatcaactgaatcggag 159
>46958_ath-miR168b:pmrd
Length = 124
Score = 60.0 bits (30), Expect = 5e-10
Identities = 36/38 (94%)
Strand = Plus / Plus
Query: 12 cggcggtctctaattcgcttggtgcaggtcgggaactg 49
|||||||||| ||||||||||||||||||||||||||
Sbjct: 5 cggcggtctcggattcgcttggtgcaggtcgggaactg 42
Score = 48.1 bits (24), Expect = 2e-06
Identities = 36/40 (90%)
Strand = Plus / Plus
Query: 99 agctcccgccttgcatcaactgaatcggagcccgcggtga 138
|||||||| |||| |||||||||||||||| ||| |||||
Sbjct: 85 agctcccgtcttgtatcaactgaatcggagtccgaggtga 124
>48349_bna-miR168:pmrd
Length = 133
Score = 52.0 bits (26), Expect = 1e-07
Identities = 35/38 (92%)
Strand = Plus / Plus
Query: 12 cggcggtctctaattcgcttggtgcaggtcgggaactg 49
|||||| |||| | ||||||||||||||||||||||||
Sbjct: 4 cggcggcctctgactcgcttggtgcaggtcgggaactg 41
>47339_ath-miRf10239-akr:pmrd
Length = 129
Score = 52.0 bits (26), Expect = 1e-07
Identities = 26/26 (100%)
Strand = Plus / Plus
Query: 102 tcccgccttgcatcaactgaatcgga 127
||||||||||||||||||||||||||
Sbjct: 97 tcccgccttgcatcaactgaatcgga 122
Score = 48.1 bits (24), Expect = 2e-06
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 24 attcgcttggtgcaggtcgggaac 47
||||||||||||||||||||||||
Sbjct: 11 attcgcttggtgcaggtcgggaac 34
>46957_ath-miR168a:pmrd
Length = 138
Score = 52.0 bits (26), Expect = 1e-07
Identities = 26/26 (100%)
Strand = Plus / Plus
Query: 102 tcccgccttgcatcaactgaatcgga 127
||||||||||||||||||||||||||
Sbjct: 102 tcccgccttgcatcaactgaatcgga 127
Score = 48.1 bits (24), Expect = 2e-06
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 24 attcgcttggtgcaggtcgggaac 47
||||||||||||||||||||||||
Sbjct: 16 attcgcttggtgcaggtcgggaac 39
>55000_zma-miR168b:pmrd
Length = 104
Score = 50.1 bits (25), Expect = 5e-07
Identities = 28/29 (96%)
Strand = Plus / Plus
Query: 102 tcccgccttgcatcaactgaatcggagcc 130
|||||||||||||||| ||||||||||||
Sbjct: 66 tcccgccttgcatcaagtgaatcggagcc 94
>48649_hte-miR168:pmrd
Length = 140
Score = 50.1 bits (25), Expect = 5e-07
Identities = 25/25 (100%)
Strand = Plus / Plus
Query: 26 tcgcttggtgcaggtcgggaactgc 50
|||||||||||||||||||||||||
Sbjct: 1 tcgcttggtgcaggtcgggaactgc 25
>54375_pts-miR168b:pmrd
Length = 140
Score = 48.1 bits (24), Expect = 2e-06
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 26 tcgcttggtgcaggtcgggaactg 49
||||||||||||||||||||||||
Sbjct: 1 tcgcttggtgcaggtcgggaactg 24
Score = 40.1 bits (20), Expect = 4e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 102 tcccgccttgcatcaactga 121
||||||||||||||||||||
Sbjct: 121 tcccgccttgcatcaactga 140
>54374_pts-miR168a:pmrd
Length = 118
Score = 48.1 bits (24), Expect = 2e-06
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 26 tcgcttggtgcaggtcgggaactg 49
||||||||||||||||||||||||
Sbjct: 1 tcgcttggtgcaggtcgggaactg 24
Score = 40.1 bits (20), Expect = 4e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 102 tcccgccttgcatcaactga 121
||||||||||||||||||||
Sbjct: 99 tcccgccttgcatcaactga 118
>54366_ptr-miR168:pmrd
Length = 118
Score = 48.1 bits (24), Expect = 2e-06
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 26 tcgcttggtgcaggtcgggaactg 49
||||||||||||||||||||||||
Sbjct: 1 tcgcttggtgcaggtcgggaactg 24
Score = 40.1 bits (20), Expect = 4e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 102 tcccgccttgcatcaactga 121
||||||||||||||||||||
Sbjct: 99 tcccgccttgcatcaactga 118
>54999_zma-miR168a:pmrd
Length = 104
Score = 44.1 bits (22), Expect = 3e-05
Identities = 31/34 (91%)
Strand = Plus / Plus
Query: 102 tcccgccttgcatcaactgaatcggagcccgcgg 135
|||||||||||| ||| |||||||||||| ||||
Sbjct: 66 tcccgccttgcaccaagtgaatcggagccggcgg 99
>54436_sbi-miR168:pmrd
Length = 106
Score = 44.1 bits (22), Expect = 3e-05
Identities = 28/30 (93%)
Strand = Plus / Plus
Query: 26 tcgcttggtgcaggtcgggaactgccgccg 55
||||||||||||| |||||| |||||||||
Sbjct: 21 tcgcttggtgcagatcgggacctgccgccg 50
>46959_ath-miR168m:pmrd
Length = 104
Score = 44.1 bits (22), Expect = 3e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 26 tcgcttggtgcaggtcgggaac 47
||||||||||||||||||||||
Sbjct: 1 tcgcttggtgcaggtcgggaac 22
Score = 40.1 bits (20), Expect = 4e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 102 tcccgccttgcatcaactga 121
||||||||||||||||||||
Sbjct: 85 tcccgccttgcatcaactga 104
>54637_sof-miR168b:pmrd
Length = 103
Score = 42.1 bits (21), Expect = 1e-04
Identities = 27/29 (93%)
Strand = Plus / Plus
Query: 102 tcccgccttgcatcaactgaatcggagcc 130
|||||||||||| ||| ||||||||||||
Sbjct: 65 tcccgccttgcaccaagtgaatcggagcc 93
>54636_sof-miR168a:pmrd
Length = 104
Score = 42.1 bits (21), Expect = 1e-04
Identities = 27/29 (93%)
Strand = Plus / Plus
Query: 102 tcccgccttgcatcaactgaatcggagcc 130
|||||||||||| ||| ||||||||||||
Sbjct: 66 tcccgccttgcaccaagtgaatcggagcc 94
>48875_osa-miR168m:pmrd
Length = 67
Score = 42.1 bits (21), Expect = 1e-04
Identities = 30/33 (90%)
Strand = Plus / Plus
Query: 26 tcgcttggtgcaggtcgggaactgccgccgccg 58
||||||||||||| |||||| | ||||||||||
Sbjct: 1 tcgcttggtgcagatcgggacccgccgccgccg 33
>48873_osa-miR168a:pmrd
Length = 87
Score = 42.1 bits (21), Expect = 1e-04
Identities = 30/33 (90%)
Strand = Plus / Plus
Query: 26 tcgcttggtgcaggtcgggaactgccgccgccg 58
||||||||||||| |||||| | ||||||||||
Sbjct: 11 tcgcttggtgcagatcgggacccgccgccgccg 43
Score = 42.1 bits (21), Expect = 1e-04
Identities = 27/29 (93%)
Strand = Plus / Plus
Query: 102 tcccgccttgcatcaactgaatcggagcc 130
|||||||||||| ||| ||||||||||||
Sbjct: 58 tcccgccttgcaccaagtgaatcggagcc 86
>48872_osa-miR168a:pmrd
Length = 87
Score = 42.1 bits (21), Expect = 1e-04
Identities = 30/33 (90%)
Strand = Plus / Plus
Query: 26 tcgcttggtgcaggtcgggaactgccgccgccg 58
||||||||||||| |||||| | ||||||||||
Sbjct: 11 tcgcttggtgcagatcgggacccgccgccgccg 43
Score = 42.1 bits (21), Expect = 1e-04
Identities = 27/29 (93%)
Strand = Plus / Plus
Query: 102 tcccgccttgcatcaactgaatcggagcc 130
|||||||||||| ||| ||||||||||||
Sbjct: 58 tcccgccttgcaccaagtgaatcggagcc 86
>48871_osa-miR168a:pmrd
Length = 87
Score = 42.1 bits (21), Expect = 1e-04
Identities = 30/33 (90%)
Strand = Plus / Plus
Query: 26 tcgcttggtgcaggtcgggaactgccgccgccg 58
||||||||||||| |||||| | ||||||||||
Sbjct: 11 tcgcttggtgcagatcgggacccgccgccgccg 43
Score = 42.1 bits (21), Expect = 1e-04
Identities = 27/29 (93%)
Strand = Plus / Plus
Query: 102 tcccgccttgcatcaactgaatcggagcc 130
|||||||||||| ||| ||||||||||||
Sbjct: 58 tcccgccttgcaccaagtgaatcggagcc 86
>54665_stu-miR168:pmrd
Length = 133
Score = 40.1 bits (20), Expect = 4e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 26 tcgcttggtgcaggtcggga 45
||||||||||||||||||||
Sbjct: 1 tcgcttggtgcaggtcggga 20
Score = 40.1 bits (20), Expect = 4e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 102 tcccgccttgcatcaactga 121
||||||||||||||||||||
Sbjct: 114 tcccgccttgcatcaactga 133
>54546_sly-miR168:pmrd
Length = 145
Score = 40.1 bits (20), Expect = 4e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 26 tcgcttggtgcaggtcggga 45
||||||||||||||||||||
Sbjct: 1 tcgcttggtgcaggtcggga 20
