miRNEST 2.0, an integrative microRNA resource :: BLAST
>46128_miR398:micropc
Length = 140
Score = 214 bits (108), Expect = 2e-56
Identities = 133/140 (95%), Gaps = 1/140 (0%)
Strand = Plus / Plus
Query: 24 aggagtgacactaagaac-catatggttgaattgctatctccagcgtatattcatatgtt 82
|||||||||||||||||| ||||||||||||||||||||||||| |||||||||||||||
Sbjct: 1 aggagtgacactaagaacacatatggttgaattgctatctccagtgtatattcatatgtt 60
Query: 83 gtgagcacaaatttttgatgcacatacagttgtttgtcagaccttgtccaccatccattt 142
|| || ||||||||||||||||||||||||||||||| |||| ||||| |||||||||||
Sbjct: 61 gtcagtacaaatttttgatgcacatacagttgtttgtgagacattgtcgaccatccattt 120
Query: 143 gtgttctcaggtcacccctt 162
||||||||||||||||||||
Sbjct: 121 gtgttctcaggtcacccctt 140
>46357_miR398:micropc
Length = 139
Score = 212 bits (107), Expect = 7e-56
Identities = 132/139 (94%), Gaps = 1/139 (0%)
Strand = Plus / Plus
Query: 24 aggagtgacactaagaac-catatggttgaattgctatctccagcgtatattcatatgtt 82
|||||||||||||||||| ||||||||||||||||||||||||| |||||||||||||||
Sbjct: 1 aggagtgacactaagaacacatatggttgaattgctatctccagtgtatattcatatgtt 60
Query: 83 gtgagcacaaatttttgatgcacatacagttgtttgtcagaccttgtccaccatccattt 142
|| || ||||||||||||||||||||||||||||||| |||| ||||| |||||||||||
Sbjct: 61 gtcagtacaaatttttgatgcacatacagttgtttgtgagacattgtcgaccatccattt 120
Query: 143 gtgttctcaggtcacccct 161
|||||||||||||||||||
Sbjct: 121 gtgttctcaggtcacccct 139
>45118_miR398:micropc
Length = 139
Score = 212 bits (107), Expect = 7e-56
Identities = 132/139 (94%), Gaps = 1/139 (0%)
Strand = Plus / Plus
Query: 24 aggagtgacactaagaac-catatggttgaattgctatctccagcgtatattcatatgtt 82
|||||||||||||||||| ||||||||||||||||||||||||| |||||||||||||||
Sbjct: 1 aggagtgacactaagaacacatatggttgaattgctatctccagtgtatattcatatgtt 60
Query: 83 gtgagcacaaatttttgatgcacatacagttgtttgtcagaccttgtccaccatccattt 142
|| || ||||||||||||||||||||||||||||||| |||| ||||| |||||||||||
Sbjct: 61 gtcagtacaaatttttgatgcacatacagttgtttgtgagacattgtcgaccatccattt 120
Query: 143 gtgttctcaggtcacccct 161
|||||||||||||||||||
Sbjct: 121 gtgttctcaggtcacccct 139
>45213_miR398:micropc
Length = 141
Score = 168 bits (85), Expect = 1e-42
Identities = 129/141 (91%), Gaps = 2/141 (1%)
Strand = Plus / Plus
Query: 24 aggagtgacactaagaac-catatggttgaattgctatctccagcgtatattcatatgtt 82
|||||||||||||||||| || ||||||||||||||||||||| | |||||||||||||
Sbjct: 1 aggagtgacactaagaacacacatggttgaattgctatctccactgcatattcatatgtt 60
Query: 83 gtg-agcacaaatttttgatgcacatacagttgtttgtcagaccttgtccaccatccatt 141
|| || ||||||||| ||||||||||||||||||||| |||| ||||| ||||||||||
Sbjct: 61 gtacagtacaaattttcgatgcacatacagttgtttgtgagacattgtctaccatccatt 120
Query: 142 tgtgttctcaggtcacccctt 162
|||||||||||||||||||||
Sbjct: 121 tgtgttctcaggtcacccctt 141
>45917_miR398:micropc
Length = 140
Score = 167 bits (84), Expect = 4e-42
Identities = 128/140 (91%), Gaps = 2/140 (1%)
Strand = Plus / Plus
Query: 24 aggagtgacactaagaac-catatggttgaattgctatctccagcgtatattcatatgtt 82
|||||||||||||||||| || ||||||||||||||||||||| | |||||||||||||
Sbjct: 1 aggagtgacactaagaacacacatggttgaattgctatctccactgcatattcatatgtt 60
Query: 83 gtg-agcacaaatttttgatgcacatacagttgtttgtcagaccttgtccaccatccatt 141
|| || ||||||||| ||||||||||||||||||||| |||| ||||| ||||||||||
Sbjct: 61 gtacagtacaaattttcgatgcacatacagttgtttgtgagacattgtctaccatccatt 120
Query: 142 tgtgttctcaggtcacccct 161
||||||||||||||||||||
Sbjct: 121 tgtgttctcaggtcacccct 140
>45412_miR398:micropc
Length = 143
Score = 151 bits (76), Expect = 2e-37
Identities = 129/143 (90%), Gaps = 4/143 (2%)
Strand = Plus / Plus
Query: 24 aggagtgacactaagaac-catatggttgaattgctatctccagcgtatattcatatgtt 82
|||||||||||||||||| |||||||||||||||||||||||| | |||||||||||||
Sbjct: 1 aggagtgacactaagaacacatatggttgaattgctatctccactgcatattcatatgtt 60
Query: 83 gt-gagcacaaatttttgatgcacatacagttgtttgtcagacct--tgtccaccatcca 139
|| || ||||||||| ||||||||||||||||||||| |||| | ||| ||||||||
Sbjct: 61 gtacagtacaaattttcgatgcacatacagttgtttgtgagacattgtgtgaaccatcca 120
Query: 140 tttgtgttctcaggtcacccctt 162
|||||||||||||||||||||||
Sbjct: 121 tttgtgttctcaggtcacccctt 143
>45602_miR398:micropc
Length = 142
Score = 149 bits (75), Expect = 9e-37
Identities = 128/142 (90%), Gaps = 4/142 (2%)
Strand = Plus / Plus
Query: 24 aggagtgacactaagaac-catatggttgaattgctatctccagcgtatattcatatgtt 82
|||||||||||||||||| |||||||||||||||||||||||| | |||||||||||||
Sbjct: 1 aggagtgacactaagaacacatatggttgaattgctatctccactgcatattcatatgtt 60
Query: 83 gt-gagcacaaatttttgatgcacatacagttgtttgtcagacct--tgtccaccatcca 139
|| || ||||||||| ||||||||||||||||||||| |||| | ||| ||||||||
Sbjct: 61 gtacagtacaaattttcgatgcacatacagttgtttgtgagacattgtgtgaaccatcca 120
Query: 140 tttgtgttctcaggtcacccct 161
||||||||||||||||||||||
Sbjct: 121 tttgtgttctcaggtcacccct 142
>46384_miR398:micropc
Length = 107
Score = 50.1 bits (25), Expect = 6e-07
Identities = 25/25 (100%)
Strand = Plus / Plus
Query: 138 catttgtgttctcaggtcacccctt 162
|||||||||||||||||||||||||
Sbjct: 83 catttgtgttctcaggtcacccctt 107
>46703_miR398:micropc
Length = 149
Score = 48.1 bits (24), Expect = 2e-06
Identities = 34/36 (94%), Gaps = 1/36 (2%)
Strand = Plus / Plus
Query: 24 aggagtgacactaagaac-catatggttgaattgct 58
|||||||||||||||||| |||||||| ||||||||
Sbjct: 1 aggagtgacactaagaacacatatggtggaattgct 36
Score = 40.1 bits (20), Expect = 6e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 142 tgtgttctcaggtcacccct 161
||||||||||||||||||||
Sbjct: 130 tgtgttctcaggtcacccct 149
>46478_miR398:micropc
Length = 105
Score = 48.1 bits (24), Expect = 2e-06
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 138 catttgtgttctcaggtcacccct 161
||||||||||||||||||||||||
Sbjct: 82 catttgtgttctcaggtcacccct 105
>46028_miR398:micropc
Length = 150
Score = 48.1 bits (24), Expect = 2e-06
Identities = 34/36 (94%), Gaps = 1/36 (2%)
Strand = Plus / Plus
Query: 24 aggagtgacactaagaac-catatggttgaattgct 58
|||||||||||||||||| |||||||| ||||||||
Sbjct: 1 aggagtgacactaagaacacatatggtggaattgct 36
Score = 42.1 bits (21), Expect = 2e-04
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 142 tgtgttctcaggtcacccctt 162
|||||||||||||||||||||
Sbjct: 130 tgtgttctcaggtcacccctt 150
>46310_miR398:micropc
Length = 113
Score = 46.1 bits (23), Expect = 1e-05
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 140 tttgtgttctcaggtcacccctt 162
|||||||||||||||||||||||
Sbjct: 91 tttgtgttctcaggtcacccctt 113
>45772_miR398:micropc
Length = 92
Score = 46.1 bits (23), Expect = 1e-05
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 140 tttgtgttctcaggtcacccctt 162
|||||||||||||||||||||||
Sbjct: 70 tttgtgttctcaggtcacccctt 92
>45083_miR398:micropc
Length = 92
Score = 46.1 bits (23), Expect = 1e-05
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 140 tttgtgttctcaggtcacccctt 162
|||||||||||||||||||||||
Sbjct: 70 tttgtgttctcaggtcacccctt 92
>46761_miR398:micropc
Length = 133
Score = 44.1 bits (22), Expect = 4e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 141 ttgtgttctcaggtcacccctt 162
||||||||||||||||||||||
Sbjct: 112 ttgtgttctcaggtcacccctt 133
>46499_miR398:micropc
Length = 67
Score = 44.1 bits (22), Expect = 4e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 141 ttgtgttctcaggtcacccctt 162
||||||||||||||||||||||
Sbjct: 46 ttgtgttctcaggtcacccctt 67
>46301_miR398:micropc
Length = 111
Score = 44.1 bits (22), Expect = 4e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 140 tttgtgttctcaggtcacccct 161
||||||||||||||||||||||
Sbjct: 90 tttgtgttctcaggtcacccct 111
>45871_miR398:micropc
Length = 140
Score = 44.1 bits (22), Expect = 4e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 141 ttgtgttctcaggtcacccctt 162
||||||||||||||||||||||
Sbjct: 119 ttgtgttctcaggtcacccctt 140
>45427_miR398:micropc
Length = 94
Score = 44.1 bits (22), Expect = 4e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 140 tttgtgttctcaggtcacccct 161
||||||||||||||||||||||
Sbjct: 73 tttgtgttctcaggtcacccct 94
>44964_miR398:micropc
Length = 94
Score = 44.1 bits (22), Expect = 4e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 140 tttgtgttctcaggtcacccct 161
||||||||||||||||||||||
Sbjct: 73 tttgtgttctcaggtcacccct 94
>46491_miR398:micropc
Length = 131
Score = 42.1 bits (21), Expect = 2e-04
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 141 ttgtgttctcaggtcacccct 161
|||||||||||||||||||||
Sbjct: 111 ttgtgttctcaggtcacccct 131
>46328_miR398:micropc
Length = 138
Score = 42.1 bits (21), Expect = 2e-04
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 141 ttgtgttctcaggtcacccct 161
|||||||||||||||||||||
Sbjct: 118 ttgtgttctcaggtcacccct 138
>45288_miR398:micropc
Length = 65
Score = 42.1 bits (21), Expect = 2e-04
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 141 ttgtgttctcaggtcacccct 161
|||||||||||||||||||||
Sbjct: 45 ttgtgttctcaggtcacccct 65
>46124_miR398:micropc
Length = 97
Score = 40.1 bits (20), Expect = 6e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 142 tgtgttctcaggtcacccct 161
||||||||||||||||||||
Sbjct: 77 tgtgttctcaggtcacccct 96
>45706_miR398:micropc
Length = 106
Score = 40.1 bits (20), Expect = 6e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 142 tgtgttctcaggtcacccct 161
||||||||||||||||||||
Sbjct: 87 tgtgttctcaggtcacccct 106
>45380_miR398:micropc
Length = 108
Score = 40.1 bits (20), Expect = 6e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 142 tgtgttctcaggtcacccct 161
||||||||||||||||||||
Sbjct: 88 tgtgttctcaggtcacccct 107
>45370_miR398:micropc
Length = 95
Score = 40.1 bits (20), Expect = 6e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 142 tgtgttctcaggtcacccct 161
||||||||||||||||||||
Sbjct: 76 tgtgttctcaggtcacccct 95
