miRNEST 2.0, an integrative microRNA resource :: BLAST
>41572_vvi-MIR159c:mirbase
Length = 190
Score = 63.9 bits (32), Expect = 4e-11
Identities = 65/76 (85%)
Strand = Plus / Plus
Query: 107 ttgtggcttgcatacgccaggagattcattatcctttttctgatccttttttggattgaa 166
|||||||||||||| |||||| | |||||||| || ||||||| |||||||||||
Sbjct: 111 ttgtggcttgcatatctcaggagctgcattatccaagtttagatccttgtttggattgaa 170
Query: 167 gggagctctacacctc 182
||||||||||||||||
Sbjct: 171 gggagctctacacctc 186
Score = 54.0 bits (27), Expect = 4e-08
Identities = 54/63 (85%)
Strand = Plus / Plus
Query: 14 gagctccttgaagtccaatagaggatctgagtgggaatatcgagctgctggtctatggat 73
|||||||||||||||||||||||| ||| | |||| | || ||||||||| |||||||
Sbjct: 11 gagctccttgaagtccaatagagggtcttactgggtagattgagctgctgacttatggat 70
Query: 74 ccc 76
|||
Sbjct: 71 ccc 73
>40338_rco-MIR159:mirbase
Length = 180
Score = 61.9 bits (31), Expect = 2e-10
Identities = 55/63 (87%)
Strand = Plus / Plus
Query: 14 gagctccttgaagtccaatagaggatctgagtgggaatatcgagctgctggtctatggat 73
|||||||||||||||||||||||||||| |||| | || ||||||||| ||||||||
Sbjct: 6 gagctccttgaagtccaatagaggatcttgatgggtagattgagctgctgagctatggat 65
Query: 74 ccc 76
|||
Sbjct: 66 ccc 68
Score = 56.0 bits (28), Expect = 1e-08
Identities = 61/72 (84%)
Strand = Plus / Plus
Query: 107 ttgtggcttgcatacgccaggagattcattatcctttttctgatccttttttggattgaa 166
|||||||||||||| |||||| ||||||| | | | | ||||||| |||||||||||
Sbjct: 106 ttgtggcttgcatatctcaggagcttcattaccttgtattagatccttgtttggattgaa 165
Query: 167 gggagctctaca 178
||||||||||||
Sbjct: 166 gggagctctaca 177
>40432_gma-MIR159a:mirbase
Length = 214
Score = 54.0 bits (27), Expect = 4e-08
Identities = 33/35 (94%)
Strand = Plus / Plus
Query: 7 tgaagtagagctccttgaagtccaatagaggatct 41
|||||| ||||||||||||||||||| ||||||||
Sbjct: 16 tgaagtggagctccttgaagtccaattgaggatct 50
Score = 52.0 bits (26), Expect = 2e-07
Identities = 29/30 (96%)
Strand = Plus / Plus
Query: 151 ccttttttggattgaagggagctctacacc 180
|||| |||||||||||||||||||||||||
Sbjct: 170 ccttctttggattgaagggagctctacacc 199
>40397_ahy-MIR159:mirbase
Length = 197
Score = 54.0 bits (27), Expect = 4e-08
Identities = 30/31 (96%)
Strand = Plus / Plus
Query: 148 gatccttttttggattgaagggagctctaca 178
||||||| |||||||||||||||||||||||
Sbjct: 149 gatccttatttggattgaagggagctctaca 179
Score = 46.1 bits (23), Expect = 9e-06
Identities = 53/63 (84%)
Strand = Plus / Plus
Query: 14 gagctccttgaagtccaatagaggatctgagtgggaatatcgagctgctggtctatggat 73
|||||||||||||||||| ||||| ||| ||||| | || |||||||| ||||||||
Sbjct: 5 gagctccttgaagtccaacagagggtcttggtgggtagattgagctgctaagctatggat 64
Query: 74 ccc 76
|||
Sbjct: 65 ccc 67
>41922_osa-MIR159f:mirbase
Length = 188
Score = 52.0 bits (26), Expect = 2e-07
Identities = 26/26 (100%)
Strand = Plus / Plus
Query: 157 ttggattgaagggagctctacacctc 182
||||||||||||||||||||||||||
Sbjct: 159 ttggattgaagggagctctacacctc 184
>41528_sly-MIR159:mirbase
Length = 177
Score = 52.0 bits (26), Expect = 2e-07
Identities = 29/30 (96%)
Strand = Plus / Plus
Query: 147 tgatccttttttggattgaagggagctcta 176
||||| ||||||||||||||||||||||||
Sbjct: 148 tgatcattttttggattgaagggagctcta 177
>41300_ptc-MIR159b:mirbase
Length = 187
Score = 52.0 bits (26), Expect = 2e-07
Identities = 32/34 (94%)
Strand = Plus / Plus
Query: 148 gatccttttttggattgaagggagctctacacct 181
|||| |||||||||||||||||||||||| ||||
Sbjct: 150 gatctttttttggattgaagggagctctaaacct 183
Score = 44.1 bits (22), Expect = 4e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 14 gagctccttgaagtccaataga 35
||||||||||||||||||||||
Sbjct: 13 gagctccttgaagtccaataga 34
>41301_ptc-MIR159c:mirbase
Length = 183
Score = 50.1 bits (25), Expect = 6e-07
Identities = 28/29 (96%)
Strand = Plus / Plus
Query: 148 gatccttttttggattgaagggagctcta 176
||||| |||||||||||||||||||||||
Sbjct: 146 gatccctttttggattgaagggagctcta 174
Score = 48.1 bits (24), Expect = 2e-06
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 14 gagctccttgaagtccaatagagg 37
||||||||||||||||||||||||
Sbjct: 13 gagctccttgaagtccaatagagg 36
>41299_ptc-MIR159a:mirbase
Length = 183
Score = 50.1 bits (25), Expect = 6e-07
Identities = 28/29 (96%)
Strand = Plus / Plus
Query: 148 gatccttttttggattgaagggagctcta 176
||||| |||||||||||||||||||||||
Sbjct: 146 gatccctttttggattgaagggagctcta 174
Score = 48.1 bits (24), Expect = 2e-06
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 14 gagctccttgaagtccaatagagg 37
||||||||||||||||||||||||
Sbjct: 13 gagctccttgaagtccaatagagg 36
>41218_csi-MIR159:mirbase
Length = 216
Score = 50.1 bits (25), Expect = 6e-07
Identities = 25/25 (100%)
Strand = Plus / Plus
Query: 153 ttttttggattgaagggagctctac 177
|||||||||||||||||||||||||
Sbjct: 183 ttttttggattgaagggagctctac 207
Score = 40.1 bits (20), Expect = 6e-04
Identities = 23/24 (95%)
Strand = Plus / Plus
Query: 14 gagctccttgaagtccaatagagg 37
|||||||||||||||||| |||||
Sbjct: 14 gagctccttgaagtccaaaagagg 37
>41024_pvu-MIR159a:mirbase
Length = 174
Score = 50.1 bits (25), Expect = 6e-07
Identities = 28/29 (96%)
Strand = Plus / Plus
Query: 149 atccttttttggattgaagggagctctac 177
|||||| ||||||||||||||||||||||
Sbjct: 146 atccttctttggattgaagggagctctac 174
Score = 48.1 bits (24), Expect = 2e-06
Identities = 27/28 (96%)
Strand = Plus / Plus
Query: 14 gagctccttgaagtccaatagaggatct 41
||||||||||||||||||| ||||||||
Sbjct: 4 gagctccttgaagtccaattgaggatct 31
>41023_pvu-MIR159a:mirbase
Length = 174
Score = 50.1 bits (25), Expect = 6e-07
Identities = 28/29 (96%)
Strand = Plus / Plus
Query: 149 atccttttttggattgaagggagctctac 177
|||||| ||||||||||||||||||||||
Sbjct: 146 atccttctttggattgaagggagctctac 174
Score = 48.1 bits (24), Expect = 2e-06
Identities = 27/28 (96%)
Strand = Plus / Plus
Query: 14 gagctccttgaagtccaatagaggatct 41
||||||||||||||||||| ||||||||
Sbjct: 4 gagctccttgaagtccaattgaggatct 31
>40657_mtr-MIR159a:mirbase
Length = 183
Score = 46.1 bits (23), Expect = 9e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 156 tttggattgaagggagctctaca 178
|||||||||||||||||||||||
Sbjct: 152 tttggattgaagggagctctaca 174
>40311_bra-MIR159a:mirbase
Length = 185
Score = 46.1 bits (23), Expect = 9e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 156 tttggattgaagggagctctaca 178
|||||||||||||||||||||||
Sbjct: 163 tttggattgaagggagctctaca 185
>40261_bna-MIR159:mirbase
Length = 183
Score = 46.1 bits (23), Expect = 9e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 156 tttggattgaagggagctctaca 178
|||||||||||||||||||||||
Sbjct: 161 tttggattgaagggagctctaca 183
>39804_aly-MIR159a:mirbase
Length = 222
Score = 46.1 bits (23), Expect = 9e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 156 tttggattgaagggagctctaca 178
|||||||||||||||||||||||
Sbjct: 183 tttggattgaagggagctctaca 205
Score = 40.1 bits (20), Expect = 6e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 8 gaagtagagctccttgaagt 27
||||||||||||||||||||
Sbjct: 17 gaagtagagctccttgaagt 36
>40016_ath-MIR159a:mirbase
Length = 184
Score = 44.1 bits (22), Expect = 4e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 156 tttggattgaagggagctctac 177
||||||||||||||||||||||
Sbjct: 163 tttggattgaagggagctctac 184
