miRNEST 2.0, an integrative microRNA resource :: BLAST
>54777_vvi-miR159c:pmrd
Length = 190
Score = 63.9 bits (32), Expect = 4e-11
Identities = 65/76 (85%)
Strand = Plus / Plus
Query: 107 ttgtggcttgcatacgccaggagattcattatcctttttctgatccttttttggattgaa 166
|||||||||||||| |||||| | |||||||| || ||||||| |||||||||||
Sbjct: 111 ttgtggcttgcatatctcaggagctgcattatccaagtttagatccttgtttggattgaa 170
Query: 167 gggagctctacacctc 182
||||||||||||||||
Sbjct: 171 gggagctctacacctc 186
Score = 54.0 bits (27), Expect = 4e-08
Identities = 54/63 (85%)
Strand = Plus / Plus
Query: 14 gagctccttgaagtccaatagaggatctgagtgggaatatcgagctgctggtctatggat 73
|||||||||||||||||||||||| ||| | |||| | || ||||||||| |||||||
Sbjct: 11 gagctccttgaagtccaatagagggtcttactgggtagattgagctgctgacttatggat 70
Query: 74 ccc 76
|||
Sbjct: 71 ccc 73
>48539_gma-miR159a:pmrd
Length = 214
Score = 54.0 bits (27), Expect = 4e-08
Identities = 33/35 (94%)
Strand = Plus / Plus
Query: 7 tgaagtagagctccttgaagtccaatagaggatct 41
|||||| ||||||||||||||||||| ||||||||
Sbjct: 16 tgaagtggagctccttgaagtccaattgaggatct 50
Score = 52.0 bits (26), Expect = 2e-07
Identities = 29/30 (96%)
Strand = Plus / Plus
Query: 151 ccttttttggattgaagggagctctacacc 180
|||| |||||||||||||||||||||||||
Sbjct: 170 ccttctttggattgaagggagctctacacc 199
>54540_sly-miR159:pmrd
Length = 177
Score = 52.0 bits (26), Expect = 2e-07
Identities = 29/30 (96%)
Strand = Plus / Plus
Query: 147 tgatccttttttggattgaagggagctcta 176
||||| ||||||||||||||||||||||||
Sbjct: 148 tgatcattttttggattgaagggagctcta 177
>51603_ptc-miR159b:pmrd
Length = 187
Score = 52.0 bits (26), Expect = 2e-07
Identities = 32/34 (94%)
Strand = Plus / Plus
Query: 148 gatccttttttggattgaagggagctctacacct 181
|||| |||||||||||||||||||||||| ||||
Sbjct: 150 gatctttttttggattgaagggagctctaaacct 183
Score = 44.1 bits (22), Expect = 4e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 14 gagctccttgaagtccaataga 35
||||||||||||||||||||||
Sbjct: 13 gagctccttgaagtccaataga 34
>48824_osa-miR159f:pmrd
Length = 188
Score = 52.0 bits (26), Expect = 2e-07
Identities = 26/26 (100%)
Strand = Plus / Plus
Query: 157 ttggattgaagggagctctacacctc 182
||||||||||||||||||||||||||
Sbjct: 159 ttggattgaagggagctctacacctc 184
>54378_pvu-miR159:pmrd
Length = 174
Score = 50.1 bits (25), Expect = 6e-07
Identities = 28/29 (96%)
Strand = Plus / Plus
Query: 149 atccttttttggattgaagggagctctac 177
|||||| ||||||||||||||||||||||
Sbjct: 146 atccttctttggattgaagggagctctac 174
Score = 48.1 bits (24), Expect = 2e-06
Identities = 27/28 (96%)
Strand = Plus / Plus
Query: 14 gagctccttgaagtccaatagaggatct 41
||||||||||||||||||| ||||||||
Sbjct: 4 gagctccttgaagtccaattgaggatct 31
>54377_pvu-miR159:pmrd
Length = 174
Score = 50.1 bits (25), Expect = 6e-07
Identities = 28/29 (96%)
Strand = Plus / Plus
Query: 149 atccttttttggattgaagggagctctac 177
|||||| ||||||||||||||||||||||
Sbjct: 146 atccttctttggattgaagggagctctac 174
Score = 48.1 bits (24), Expect = 2e-06
Identities = 27/28 (96%)
Strand = Plus / Plus
Query: 14 gagctccttgaagtccaatagaggatct 41
||||||||||||||||||| ||||||||
Sbjct: 4 gagctccttgaagtccaattgaggatct 31
>52093_ptc-miRf10271-akr:pmrd
Length = 174
Score = 50.1 bits (25), Expect = 6e-07
Identities = 28/29 (96%)
Strand = Plus / Plus
Query: 148 gatccttttttggattgaagggagctcta 176
||||| |||||||||||||||||||||||
Sbjct: 141 gatccctttttggattgaagggagctcta 169
Score = 48.1 bits (24), Expect = 2e-06
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 14 gagctccttgaagtccaatagagg 37
||||||||||||||||||||||||
Sbjct: 8 gagctccttgaagtccaatagagg 31
>51604_ptc-miR159c:pmrd
Length = 183
Score = 50.1 bits (25), Expect = 6e-07
Identities = 28/29 (96%)
Strand = Plus / Plus
Query: 148 gatccttttttggattgaagggagctcta 176
||||| |||||||||||||||||||||||
Sbjct: 146 gatccctttttggattgaagggagctcta 174
Score = 48.1 bits (24), Expect = 2e-06
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 14 gagctccttgaagtccaatagagg 37
||||||||||||||||||||||||
Sbjct: 13 gagctccttgaagtccaatagagg 36
>51602_ptc-miR159a:pmrd
Length = 183
Score = 50.1 bits (25), Expect = 6e-07
Identities = 28/29 (96%)
Strand = Plus / Plus
Query: 148 gatccttttttggattgaagggagctcta 176
||||| |||||||||||||||||||||||
Sbjct: 146 gatccctttttggattgaagggagctcta 174
Score = 48.1 bits (24), Expect = 2e-06
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 14 gagctccttgaagtccaatagagg 37
||||||||||||||||||||||||
Sbjct: 13 gagctccttgaagtccaatagagg 36
>48686_ltu-miR159:pmrd
Length = 345
Score = 50.1 bits (25), Expect = 6e-07
Identities = 25/25 (100%)
Strand = Plus / Plus
Query: 156 tttggattgaagggagctctacacc 180
|||||||||||||||||||||||||
Sbjct: 1 tttggattgaagggagctctacacc 25
>48701_mtr-miR159c:pmrd
Length = 44
Score = 46.1 bits (23), Expect = 9e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 156 tttggattgaagggagctctaca 178
|||||||||||||||||||||||
Sbjct: 1 tttggattgaagggagctctaca 23
>48395_bra-miR159a:pmrd
Length = 185
Score = 46.1 bits (23), Expect = 9e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 156 tttggattgaagggagctctaca 178
|||||||||||||||||||||||
Sbjct: 163 tttggattgaagggagctctaca 185
>48339_bna-miR159:pmrd
Length = 183
Score = 46.1 bits (23), Expect = 9e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 156 tttggattgaagggagctctaca 178
|||||||||||||||||||||||
Sbjct: 161 tttggattgaagggagctctaca 183
>48728_mtr-miR319b:pmrd
Length = 42
Score = 44.1 bits (22), Expect = 4e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 157 ttggattgaagggagctctaca 178
||||||||||||||||||||||
Sbjct: 1 ttggattgaagggagctctaca 22
>46931_ath-miR159a:pmrd
Length = 184
Score = 44.1 bits (22), Expect = 4e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 156 tttggattgaagggagctctac 177
||||||||||||||||||||||
Sbjct: 163 tttggattgaagggagctctac 184
>48699_mtr-miR159a:pmrd
Length = 168
Score = 42.1 bits (21), Expect = 1e-04
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 156 tttggattgaagggagctcta 176
|||||||||||||||||||||
Sbjct: 148 tttggattgaagggagctcta 168
>54937_zma-miR159m:pmrd
Length = 457
Score = 40.1 bits (20), Expect = 6e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 156 tttggattgaagggagctct 175
||||||||||||||||||||
Sbjct: 1 tttggattgaagggagctct 20
>54931_zma-miR159b:pmrd
Length = 221
Score = 40.1 bits (20), Expect = 6e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 156 tttggattgaagggagctct 175
||||||||||||||||||||
Sbjct: 182 tttggattgaagggagctct 201
>54930_zma-miR159a:pmrd
Length = 246
Score = 40.1 bits (20), Expect = 6e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 156 tttggattgaagggagctct 175
||||||||||||||||||||
Sbjct: 207 tttggattgaagggagctct 226
>54674_tae-miR159b:pmrd
Length = 255
Score = 40.1 bits (20), Expect = 6e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 156 tttggattgaagggagctct 175
||||||||||||||||||||
Sbjct: 230 tttggattgaagggagctct 249
>54673_tae-miR159a:pmrd
Length = 177
Score = 40.1 bits (20), Expect = 6e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 156 tttggattgaagggagctct 175
||||||||||||||||||||
Sbjct: 154 tttggattgaagggagctct 173
>54653_spr-miR159:pmrd
Length = 392
Score = 40.1 bits (20), Expect = 6e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 156 tttggattgaagggagctct 175
||||||||||||||||||||
Sbjct: 1 tttggattgaagggagctct 20
