miRNEST 2.0, an integrative microRNA resource :: BLAST
>45412_miR398:micropc
Length = 143
Score = 283 bits (143), Expect = 2e-77
Identities = 143/143 (100%)
Strand = Plus / Plus
Query: 22 aggagtgacactaagaacacatatggttgaattgctatctccactgcatattcatatgtt 81
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 aggagtgacactaagaacacatatggttgaattgctatctccactgcatattcatatgtt 60
Query: 82 gtacagtacaaattttcgatgcacatacagttgtttgtgagacattgtgtgaaccatcca 141
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 gtacagtacaaattttcgatgcacatacagttgtttgtgagacattgtgtgaaccatcca 120
Query: 142 tttgtgttctcaggtcacccctt 164
|||||||||||||||||||||||
Sbjct: 121 tttgtgttctcaggtcacccctt 143
>45602_miR398:micropc
Length = 142
Score = 281 bits (142), Expect = 9e-77
Identities = 142/142 (100%)
Strand = Plus / Plus
Query: 22 aggagtgacactaagaacacatatggttgaattgctatctccactgcatattcatatgtt 81
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 aggagtgacactaagaacacatatggttgaattgctatctccactgcatattcatatgtt 60
Query: 82 gtacagtacaaattttcgatgcacatacagttgtttgtgagacattgtgtgaaccatcca 141
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 gtacagtacaaattttcgatgcacatacagttgtttgtgagacattgtgtgaaccatcca 120
Query: 142 tttgtgttctcaggtcacccct 163
||||||||||||||||||||||
Sbjct: 121 tttgtgttctcaggtcacccct 142
>45213_miR398:micropc
Length = 141
Score = 246 bits (124), Expect = 5e-66
Identities = 139/143 (97%), Gaps = 2/143 (1%)
Strand = Plus / Plus
Query: 22 aggagtgacactaagaacacatatggttgaattgctatctccactgcatattcatatgtt 81
||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||
Sbjct: 1 aggagtgacactaagaacacacatggttgaattgctatctccactgcatattcatatgtt 60
Query: 82 gtacagtacaaattttcgatgcacatacagttgtttgtgagacattgtgtgaaccatcca 141
|||||||||||||||||||||||||||||||||||||||||||||||| | ||||||||
Sbjct: 61 gtacagtacaaattttcgatgcacatacagttgtttgtgagacattgtct--accatcca 118
Query: 142 tttgtgttctcaggtcacccctt 164
|||||||||||||||||||||||
Sbjct: 119 tttgtgttctcaggtcacccctt 141
>45917_miR398:micropc
Length = 140
Score = 244 bits (123), Expect = 2e-65
Identities = 138/142 (97%), Gaps = 2/142 (1%)
Strand = Plus / Plus
Query: 22 aggagtgacactaagaacacatatggttgaattgctatctccactgcatattcatatgtt 81
||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||
Sbjct: 1 aggagtgacactaagaacacacatggttgaattgctatctccactgcatattcatatgtt 60
Query: 82 gtacagtacaaattttcgatgcacatacagttgtttgtgagacattgtgtgaaccatcca 141
|||||||||||||||||||||||||||||||||||||||||||||||| | ||||||||
Sbjct: 61 gtacagtacaaattttcgatgcacatacagttgtttgtgagacattgtct--accatcca 118
Query: 142 tttgtgttctcaggtcacccct 163
||||||||||||||||||||||
Sbjct: 119 tttgtgttctcaggtcacccct 140
>46128_miR398:micropc
Length = 140
Score = 206 bits (104), Expect = 4e-54
Identities = 135/143 (94%), Gaps = 3/143 (2%)
Strand = Plus / Plus
Query: 22 aggagtgacactaagaacacatatggttgaattgctatctccactgcatattcatatgtt 81
||||||||||||||||||||||||||||||||||||||||||| || |||||||||||||
Sbjct: 1 aggagtgacactaagaacacatatggttgaattgctatctccagtgtatattcatatgtt 60
Query: 82 gtacagtacaaattttcgatgcacatacagttgtttgtgagacattgtgtgaaccatcca 141
|| ||||||||||||| |||||||||||||||||||||||||||| ||| ||||||||
Sbjct: 61 gt-cagtacaaatttttgatgcacatacagttgtttgtgagacat--tgtcgaccatcca 117
Query: 142 tttgtgttctcaggtcacccctt 164
|||||||||||||||||||||||
Sbjct: 118 tttgtgttctcaggtcacccctt 140
>46357_miR398:micropc
Length = 139
Score = 204 bits (103), Expect = 2e-53
Identities = 134/142 (94%), Gaps = 3/142 (2%)
Strand = Plus / Plus
Query: 22 aggagtgacactaagaacacatatggttgaattgctatctccactgcatattcatatgtt 81
||||||||||||||||||||||||||||||||||||||||||| || |||||||||||||
Sbjct: 1 aggagtgacactaagaacacatatggttgaattgctatctccagtgtatattcatatgtt 60
Query: 82 gtacagtacaaattttcgatgcacatacagttgtttgtgagacattgtgtgaaccatcca 141
|| ||||||||||||| |||||||||||||||||||||||||||| ||| ||||||||
Sbjct: 61 gt-cagtacaaatttttgatgcacatacagttgtttgtgagacat--tgtcgaccatcca 117
Query: 142 tttgtgttctcaggtcacccct 163
||||||||||||||||||||||
Sbjct: 118 tttgtgttctcaggtcacccct 139
>45118_miR398:micropc
Length = 139
Score = 204 bits (103), Expect = 2e-53
Identities = 134/142 (94%), Gaps = 3/142 (2%)
Strand = Plus / Plus
Query: 22 aggagtgacactaagaacacatatggttgaattgctatctccactgcatattcatatgtt 81
||||||||||||||||||||||||||||||||||||||||||| || |||||||||||||
Sbjct: 1 aggagtgacactaagaacacatatggttgaattgctatctccagtgtatattcatatgtt 60
Query: 82 gtacagtacaaattttcgatgcacatacagttgtttgtgagacattgtgtgaaccatcca 141
|| ||||||||||||| |||||||||||||||||||||||||||| ||| ||||||||
Sbjct: 61 gt-cagtacaaatttttgatgcacatacagttgtttgtgagacat--tgtcgaccatcca 117
Query: 142 tttgtgttctcaggtcacccct 163
||||||||||||||||||||||
Sbjct: 118 tttgtgttctcaggtcacccct 139
>46703_miR398:micropc
Length = 149
Score = 63.9 bits (32), Expect = 4e-11
Identities = 35/36 (97%)
Strand = Plus / Plus
Query: 22 aggagtgacactaagaacacatatggttgaattgct 57
||||||||||||||||||||||||||| ||||||||
Sbjct: 1 aggagtgacactaagaacacatatggtggaattgct 36
Score = 42.1 bits (21), Expect = 1e-04
Identities = 39/45 (86%)
Strand = Plus / Plus
Query: 75 atatgttgtacagtacaaattttcgatgcacatacagttgtttgt 119
||||||||||| |||||||| | | |||||||||| ||||||||
Sbjct: 63 atatgttgtactgtacaaatatccaatgcacatacttttgtttgt 107
Score = 40.1 bits (20), Expect = 6e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 144 tgtgttctcaggtcacccct 163
||||||||||||||||||||
Sbjct: 130 tgtgttctcaggtcacccct 149
>46028_miR398:micropc
Length = 150
Score = 63.9 bits (32), Expect = 4e-11
Identities = 35/36 (97%)
Strand = Plus / Plus
Query: 22 aggagtgacactaagaacacatatggttgaattgct 57
||||||||||||||||||||||||||| ||||||||
Sbjct: 1 aggagtgacactaagaacacatatggtggaattgct 36
Score = 42.1 bits (21), Expect = 1e-04
Identities = 39/45 (86%)
Strand = Plus / Plus
Query: 75 atatgttgtacagtacaaattttcgatgcacatacagttgtttgt 119
||||||||||| |||||||| | | |||||||||| ||||||||
Sbjct: 63 atatgttgtactgtacaaatatccaatgcacatacttttgtttgt 107
Score = 42.1 bits (21), Expect = 1e-04
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 144 tgtgttctcaggtcacccctt 164
|||||||||||||||||||||
Sbjct: 130 tgtgttctcaggtcacccctt 150
>46384_miR398:micropc
Length = 107
Score = 50.1 bits (25), Expect = 6e-07
Identities = 25/25 (100%)
Strand = Plus / Plus
Query: 140 catttgtgttctcaggtcacccctt 164
|||||||||||||||||||||||||
Sbjct: 83 catttgtgttctcaggtcacccctt 107
>46478_miR398:micropc
Length = 105
Score = 48.1 bits (24), Expect = 2e-06
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 140 catttgtgttctcaggtcacccct 163
||||||||||||||||||||||||
Sbjct: 82 catttgtgttctcaggtcacccct 105
>46310_miR398:micropc
Length = 113
Score = 46.1 bits (23), Expect = 9e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 142 tttgtgttctcaggtcacccctt 164
|||||||||||||||||||||||
Sbjct: 91 tttgtgttctcaggtcacccctt 113
>45772_miR398:micropc
Length = 92
Score = 46.1 bits (23), Expect = 9e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 142 tttgtgttctcaggtcacccctt 164
|||||||||||||||||||||||
Sbjct: 70 tttgtgttctcaggtcacccctt 92
>45083_miR398:micropc
Length = 92
Score = 46.1 bits (23), Expect = 9e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 142 tttgtgttctcaggtcacccctt 164
|||||||||||||||||||||||
Sbjct: 70 tttgtgttctcaggtcacccctt 92
>46761_miR398:micropc
Length = 133
Score = 44.1 bits (22), Expect = 4e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 143 ttgtgttctcaggtcacccctt 164
||||||||||||||||||||||
Sbjct: 112 ttgtgttctcaggtcacccctt 133
>46499_miR398:micropc
Length = 67
Score = 44.1 bits (22), Expect = 4e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 143 ttgtgttctcaggtcacccctt 164
||||||||||||||||||||||
Sbjct: 46 ttgtgttctcaggtcacccctt 67
>46301_miR398:micropc
Length = 111
Score = 44.1 bits (22), Expect = 4e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 142 tttgtgttctcaggtcacccct 163
||||||||||||||||||||||
Sbjct: 90 tttgtgttctcaggtcacccct 111
>45871_miR398:micropc
Length = 140
Score = 44.1 bits (22), Expect = 4e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 143 ttgtgttctcaggtcacccctt 164
||||||||||||||||||||||
Sbjct: 119 ttgtgttctcaggtcacccctt 140
>45427_miR398:micropc
Length = 94
Score = 44.1 bits (22), Expect = 4e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 142 tttgtgttctcaggtcacccct 163
||||||||||||||||||||||
Sbjct: 73 tttgtgttctcaggtcacccct 94
>44964_miR398:micropc
Length = 94
Score = 44.1 bits (22), Expect = 4e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 142 tttgtgttctcaggtcacccct 163
||||||||||||||||||||||
Sbjct: 73 tttgtgttctcaggtcacccct 94
>46491_miR398:micropc
Length = 131
Score = 42.1 bits (21), Expect = 1e-04
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 143 ttgtgttctcaggtcacccct 163
|||||||||||||||||||||
Sbjct: 111 ttgtgttctcaggtcacccct 131
>46328_miR398:micropc
Length = 138
Score = 42.1 bits (21), Expect = 1e-04
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 143 ttgtgttctcaggtcacccct 163
|||||||||||||||||||||
Sbjct: 118 ttgtgttctcaggtcacccct 138
>45288_miR398:micropc
Length = 65
Score = 42.1 bits (21), Expect = 1e-04
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 143 ttgtgttctcaggtcacccct 163
|||||||||||||||||||||
Sbjct: 45 ttgtgttctcaggtcacccct 65
>46124_miR398:micropc
Length = 97
Score = 40.1 bits (20), Expect = 6e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 144 tgtgttctcaggtcacccct 163
||||||||||||||||||||
Sbjct: 77 tgtgttctcaggtcacccct 96
>45706_miR398:micropc
Length = 106
Score = 40.1 bits (20), Expect = 6e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 144 tgtgttctcaggtcacccct 163
||||||||||||||||||||
Sbjct: 87 tgtgttctcaggtcacccct 106
>45380_miR398:micropc
Length = 108
Score = 40.1 bits (20), Expect = 6e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 144 tgtgttctcaggtcacccct 163
||||||||||||||||||||
Sbjct: 88 tgtgttctcaggtcacccct 107
>45370_miR398:micropc
Length = 95
Score = 40.1 bits (20), Expect = 6e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 144 tgtgttctcaggtcacccct 163
||||||||||||||||||||
Sbjct: 76 tgtgttctcaggtcacccct 95
