miRNEST 2.0, an integrative microRNA resource :: BLAST
BLASTX 2.2.20 [Feb-08-2009]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
>sp|P93111|HEM11_CUCSA Glutamyl-tRNA reductase 1, chloroplastic
OS=Cucumis sativus GN=HEMA1 PE=2 SV=1
Length = 552
Score = 83.6 bits (205), Expect = 4e-16
Identities = 43/60 (71%), Positives = 45/60 (75%)
Frame = +2
Query: 2 VSQGVAGFGRNISGLFKHAIMVGKRVRTETKIAEGXXXXXXXXXELALMKLPNSAHSTAR 181
V QGVAGFGRNISGLFKHAI VGKRVRTET IA G ELALMKLP +H+TAR
Sbjct: 228 VGQGVAGFGRNISGLFKHAITVGKRVRTETNIAAGAVSVSSAAVELALMKLPEPSHATAR 287
>sp|P49294|HEM12_ARATH Glutamyl-tRNA reductase 2, chloroplastic
OS=Arabidopsis thaliana GN=HEMA2 PE=2 SV=2
Length = 530
Score = 78.6 bits (192), Expect = 1e-14
Identities = 40/59 (67%), Positives = 44/59 (74%)
Frame = +2
Query: 2 VSQGVAGFGRNISGLFKHAIMVGKRVRTETKIAEGXXXXXXXXXELALMKLPNSAHSTA 178
V QGV GFGRNISGLFKHAI VGKRVRTET IA G ELALMKLP S+H+++
Sbjct: 212 VGQGVNGFGRNISGLFKHAITVGKRVRTETNIAAGAVSVSSAAVELALMKLPESSHASS 270
>sp|P42804|HEM11_ARATH Glutamyl-tRNA reductase 1, chloroplastic
OS=Arabidopsis thaliana GN=HEMA1 PE=1 SV=2
Length = 543
Score = 78.2 bits (191), Expect = 1e-14
Identities = 41/60 (68%), Positives = 44/60 (73%)
Frame = +2
Query: 2 VSQGVAGFGRNISGLFKHAIMVGKRVRTETKIAEGXXXXXXXXXELALMKLPNSAHSTAR 181
V QGV GFGRNISGLFKHAI VGKRVRTET IA G ELALMKLP S++ +AR
Sbjct: 221 VGQGVNGFGRNISGLFKHAITVGKRVRTETNIASGAVSVSSAAVELALMKLPQSSNVSAR 280
>sp|P49295|HEM12_CUCSA Glutamyl-tRNA reductase 2, chloroplastic
OS=Cucumis sativus GN=HEMA2 PE=2 SV=1
Length = 542
Score = 70.1 bits (170), Expect = 4e-12
Identities = 36/58 (62%), Positives = 41/58 (70%)
Frame = +2
Query: 8 QGVAGFGRNISGLFKHAIMVGKRVRTETKIAEGXXXXXXXXXELALMKLPNSAHSTAR 181
QGVAGF R ISGLFKHAI VGKRVRTET I+ G ELA KLP S+++TA+
Sbjct: 222 QGVAGFDRKISGLFKHAITVGKRVRTETNISSGSFSVSSAAVELAQKKLPESSYATAK 279
>sp|P0C587|HEM1_ORYSJ Glutamyl-tRNA reductase, chloroplastic
OS=Oryza sativa subsp. japonica GN=Os10g0502400 PE=2
SV=1
Length = 537
Score = 53.1 bits (126), Expect = 5e-07
Identities = 29/58 (50%), Positives = 33/58 (56%)
Frame = +2
Query: 8 QGVAGFGRNISGLFKHAIMVGKRVRTETKIAEGXXXXXXXXXELALMKLPNSAHSTAR 181
Q G G+NI +FK AI GKRVR ET I+ G ELALMKLP S +AR
Sbjct: 214 QNSGGLGKNIDRMFKDAITAGKRVRCETNISSGAVSVSSAAVELALMKLPKSECLSAR 271
>sp|A2Z928|HEM1_ORYSI Glutamyl-tRNA reductase, chloroplastic
OS=Oryza sativa subsp. indica GN=OsI_033071 PE=2 SV=2
Length = 537
Score = 53.1 bits (126), Expect = 5e-07
Identities = 29/58 (50%), Positives = 33/58 (56%)
Frame = +2
Query: 8 QGVAGFGRNISGLFKHAIMVGKRVRTETKIAEGXXXXXXXXXELALMKLPNSAHSTAR 181
Q G G+NI +FK AI GKRVR ET I+ G ELALMKLP S +AR
Sbjct: 214 QNSGGLGKNIDRMFKDAITAGKRVRCETNISSGAVSVSSAAVELALMKLPKSECLSAR 271
>sp|O65796|HEM13_HORVU Glutamyl-tRNA reductase 3, chloroplastic
OS=Hordeum vulgare GN=HEMA3 PE=2 SV=1
Length = 535
Score = 52.4 bits (124), Expect = 9e-07
Identities = 29/58 (50%), Positives = 34/58 (58%)
Frame = +2
Query: 8 QGVAGFGRNISGLFKHAIMVGKRVRTETKIAEGXXXXXXXXXELALMKLPNSAHSTAR 181
Q G G+NI +FK AI GKRVR+ET I+ G ELALMKLP S +AR
Sbjct: 210 QNSGGLGKNIDRMFKDAITAGKRVRSETNISCGAVSVSSAAVELALMKLPKSECLSAR 267
>sp|Q42843|HEM11_HORVU Glutamyl-tRNA reductase 1, chloroplastic
OS=Hordeum vulgare GN=HEMA1 PE=1 SV=1
Length = 527
Score = 52.0 bits (123), Expect = 1e-06
Identities = 28/58 (48%), Positives = 33/58 (56%)
Frame = +2
Query: 8 QGVAGFGRNISGLFKHAIMVGKRVRTETKIAEGXXXXXXXXXELALMKLPNSAHSTAR 181
Q G G+NI +FK AI GKRVR ET I+ G ELA+MKLP S +AR
Sbjct: 204 QNSGGLGKNIDRMFKDAITAGKRVRCETNISAGAVSVSSAAVELAMMKLPKSECLSAR 261
>sp|Q96563|HEM12_HORVU Glutamyl-tRNA reductase 2 (Fragment)
OS=Hordeum vulgare GN=HEMA2 PE=2 SV=1
Length = 465
Score = 50.4 bits (119), Expect = 3e-06
Identities = 27/58 (46%), Positives = 32/58 (55%)
Frame = +2
Query: 8 QGVAGFGRNISGLFKHAIMVGKRVRTETKIAEGXXXXXXXXXELALMKLPNSAHSTAR 181
Q G G+NI +FK AI GKR R ET I+ G ELA+MKLP S +AR
Sbjct: 142 QNSGGLGKNIDRMFKDAITAGKRARCETNISAGAVSVSSAAVELAMMKLPKSECLSAR 199
>sp|Q117I4|HEM1_TRIEI Glutamyl-tRNA reductase OS=Trichodesmium
erythraeum (strain IMS101) GN=hemA PE=3 SV=1
Length = 431
Score = 44.3 bits (103), Expect = 2e-04
Identities = 24/51 (47%), Positives = 28/51 (54%)
Frame = +2
Query: 2 VSQGVAGFGRNISGLFKHAIMVGKRVRTETKIAEGXXXXXXXXXELALMKL 154
+ Q G GR ++ LFK A+ GKRVRTET I G ELA MKL
Sbjct: 127 LGQKYKGIGRILNRLFKQAVTAGKRVRTETSIGTGAVSVSSAAVELAQMKL 177
>sp|B1WQ09|HEM1_CYAA5 Glutamyl-tRNA reductase OS=Cyanothece sp.
(strain ATCC 51142) GN=hemA PE=3 SV=1
Length = 430
Score = 43.1 bits (100), Expect = 5e-04
Identities = 24/55 (43%), Positives = 30/55 (54%)
Frame = +2
Query: 2 VSQGVAGFGRNISGLFKHAIMVGKRVRTETKIAEGXXXXXXXXXELALMKLPNSA 166
+SQ G GR + LFK AI GKRVR+ET I G ELA+ K+ + A
Sbjct: 127 LSQKYKGIGRLLDRLFKQAITAGKRVRSETNIGTGAVSISSAAVELAITKVDDLA 181
>sp|B0BZF9|HEM1_ACAM1 Glutamyl-tRNA reductase OS=Acaryochloris
marina (strain MBIC 11017) GN=hemA PE=3 SV=1
Length = 433
Score = 42.7 bits (99), Expect = 7e-04
Identities = 27/60 (45%), Positives = 33/60 (55%), Gaps = 1/60 (1%)
Frame = +2
Query: 2 VSQGVAGFGRNISGLFKHAIMVGKRVRTETKIAEGXXXXXXXXXELALMKLPN-SAHSTA 178
+SQ +G G ++ LFK AI GKRVRTET I G ELA +K + SAH A
Sbjct: 127 LSQKYSGAGPILNRLFKQAISAGKRVRTETSIGTGAVSISSAAVELAQIKTEDLSAHRVA 186
