miRNEST 2.0, an integrative microRNA resource :: BLAST
>41121_tcc-MIR171f:mirbase
Length = 117
Score = 61.9 bits (31), Expect = 1e-10
Identities = 34/35 (97%)
Strand = Plus / Plus
Query: 71 gggtgttttagtttgattgagccgtgccaatatca 105
|||||||||| ||||||||||||||||||||||||
Sbjct: 64 gggtgttttaatttgattgagccgtgccaatatca 98
Score = 60.0 bits (30), Expect = 4e-10
Identities = 33/34 (97%)
Strand = Plus / Plus
Query: 23 gatgttggaatggctcaatcaaatcagatctccc 56
|||||||||||||||||||||||||| |||||||
Sbjct: 19 gatgttggaatggctcaatcaaatcaaatctccc 52
>41630_vvi-MIR171i:mirbase
Length = 103
Score = 60.0 bits (30), Expect = 4e-10
Identities = 33/34 (97%)
Strand = Plus / Plus
Query: 23 gatgttggaatggctcaatcaaatcagatctccc 56
|||||||||||||||||||||||||| |||||||
Sbjct: 13 gatgttggaatggctcaatcaaatcaaatctccc 46
Score = 46.1 bits (23), Expect = 6e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 84 tgattgagccgtgccaatatcat 106
|||||||||||||||||||||||
Sbjct: 69 tgattgagccgtgccaatatcat 91
>40363_rco-MIR171e:mirbase
Length = 84
Score = 60.0 bits (30), Expect = 4e-10
Identities = 33/34 (97%)
Strand = Plus / Plus
Query: 23 gatgttggaatggctcaatcaaatcagatctccc 56
|||||||||||||||||||||||||| |||||||
Sbjct: 4 gatgttggaatggctcaatcaaatcaaatctccc 37
Score = 42.1 bits (21), Expect = 1e-04
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 84 tgattgagccgtgccaatatc 104
|||||||||||||||||||||
Sbjct: 59 tgattgagccgtgccaatatc 79
>42546_sbi-MIR171a:mirbase
Length = 161
Score = 50.1 bits (25), Expect = 4e-07
Identities = 25/25 (100%)
Strand = Plus / Plus
Query: 81 gtttgattgagccgtgccaatatca 105
|||||||||||||||||||||||||
Sbjct: 119 gtttgattgagccgtgccaatatca 143
>41625_vvi-MIR171d:mirbase
Length = 100
Score = 50.1 bits (25), Expect = 4e-07
Identities = 25/25 (100%)
Strand = Plus / Plus
Query: 81 gtttgattgagccgtgccaatatca 105
|||||||||||||||||||||||||
Sbjct: 64 gtttgattgagccgtgccaatatca 88
>41538_sly-MIR171a:mirbase
Length = 122
Score = 50.1 bits (25), Expect = 4e-07
Identities = 28/29 (96%)
Strand = Plus / Plus
Query: 76 ttttagtttgattgagccgtgccaatatc 104
|||| ||||||||||||||||||||||||
Sbjct: 79 ttttcgtttgattgagccgtgccaatatc 107
>41382_ptc-MIR171b:mirbase
Length = 103
Score = 50.1 bits (25), Expect = 4e-07
Identities = 25/25 (100%)
Strand = Plus / Plus
Query: 81 gtttgattgagccgtgccaatatca 105
|||||||||||||||||||||||||
Sbjct: 68 gtttgattgagccgtgccaatatca 92
>41381_ptc-MIR171a:mirbase
Length = 104
Score = 50.1 bits (25), Expect = 4e-07
Identities = 25/25 (100%)
Strand = Plus / Plus
Query: 81 gtttgattgagccgtgccaatatca 105
|||||||||||||||||||||||||
Sbjct: 69 gtttgattgagccgtgccaatatca 93
>41122_tcc-MIR171g:mirbase
Length = 115
Score = 50.1 bits (25), Expect = 4e-07
Identities = 28/29 (96%)
Strand = Plus / Plus
Query: 77 tttagtttgattgagccgtgccaatatca 105
|||||| ||||||||||||||||||||||
Sbjct: 68 tttagtctgattgagccgtgccaatatca 96
>40360_rco-MIR171b:mirbase
Length = 91
Score = 50.1 bits (25), Expect = 4e-07
Identities = 25/25 (100%)
Strand = Plus / Plus
Query: 81 gtttgattgagccgtgccaatatca 105
|||||||||||||||||||||||||
Sbjct: 60 gtttgattgagccgtgccaatatca 84
>40318_bra-MIR171a:mirbase
Length = 85
Score = 50.1 bits (25), Expect = 4e-07
Identities = 25/25 (100%)
Strand = Plus / Plus
Query: 81 gtttgattgagccgtgccaatatca 105
|||||||||||||||||||||||||
Sbjct: 59 gtttgattgagccgtgccaatatca 83
>40305_bol-MIR171a:mirbase
Length = 96
Score = 50.1 bits (25), Expect = 4e-07
Identities = 25/25 (100%)
Strand = Plus / Plus
Query: 81 gtttgattgagccgtgccaatatca 105
|||||||||||||||||||||||||
Sbjct: 65 gtttgattgagccgtgccaatatca 89
>40289_bna-MIR171e:mirbase
Length = 92
Score = 50.1 bits (25), Expect = 4e-07
Identities = 25/25 (100%)
Strand = Plus / Plus
Query: 81 gtttgattgagccgtgccaatatca 105
|||||||||||||||||||||||||
Sbjct: 64 gtttgattgagccgtgccaatatca 88
>40288_bna-MIR171d:mirbase
Length = 96
Score = 50.1 bits (25), Expect = 4e-07
Identities = 25/25 (100%)
Strand = Plus / Plus
Query: 81 gtttgattgagccgtgccaatatca 105
|||||||||||||||||||||||||
Sbjct: 65 gtttgattgagccgtgccaatatca 89
>39851_aly-MIR171c:mirbase
Length = 111
Score = 50.1 bits (25), Expect = 4e-07
Identities = 25/25 (100%)
Strand = Plus / Plus
Query: 81 gtttgattgagccgtgccaatatca 105
|||||||||||||||||||||||||
Sbjct: 71 gtttgattgagccgtgccaatatca 95
>42762_zma-MIR171b:mirbase
Length = 85
Score = 48.1 bits (24), Expect = 2e-06
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 82 tttgattgagccgtgccaatatca 105
||||||||||||||||||||||||
Sbjct: 60 tttgattgagccgtgccaatatca 83
>42556_sbi-MIR171k:mirbase
Length = 87
Score = 48.1 bits (24), Expect = 2e-06
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 82 tttgattgagccgtgccaatatca 105
||||||||||||||||||||||||
Sbjct: 60 tttgattgagccgtgccaatatca 83
>41983_osa-MIR171c:mirbase
Length = 99
Score = 48.1 bits (24), Expect = 2e-06
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 82 tttgattgagccgtgccaatatca 105
||||||||||||||||||||||||
Sbjct: 67 tttgattgagccgtgccaatatca 90
>41982_osa-MIR171b:mirbase
Length = 100
Score = 48.1 bits (24), Expect = 2e-06
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 82 tttgattgagccgtgccaatatca 105
||||||||||||||||||||||||
Sbjct: 68 tttgattgagccgtgccaatatca 91
>41766_bdi-MIR171c:mirbase
Length = 86
Score = 48.1 bits (24), Expect = 2e-06
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 82 tttgattgagccgtgccaatatca 105
||||||||||||||||||||||||
Sbjct: 62 tttgattgagccgtgccaatatca 85
>41624_vvi-MIR171c:mirbase
Length = 103
Score = 48.1 bits (24), Expect = 2e-06
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 82 tttgattgagccgtgccaatatca 105
||||||||||||||||||||||||
Sbjct: 68 tttgattgagccgtgccaatatca 91
>41622_vvi-MIR171a:mirbase
Length = 99
Score = 48.1 bits (24), Expect = 2e-06
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 84 tgattgagccgtgccaatatcatg 107
||||||||||||||||||||||||
Sbjct: 68 tgattgagccgtgccaatatcatg 91
>41216_crt-MIR171:mirbase
Length = 201
Score = 48.1 bits (24), Expect = 2e-06
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 82 tttgattgagccgtgccaatatca 105
||||||||||||||||||||||||
Sbjct: 159 tttgattgagccgtgccaatatca 182
>41181_aqc-MIR171e:mirbase
Length = 102
Score = 48.1 bits (24), Expect = 2e-06
Identities = 24/24 (100%)
Strand = Plus / Minus
Query: 81 gtttgattgagccgtgccaatatc 104
||||||||||||||||||||||||
Sbjct: 24 gtttgattgagccgtgccaatatc 1
>41177_aqc-MIR171a:mirbase
Length = 102
Score = 48.1 bits (24), Expect = 2e-06
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 81 gtttgattgagccgtgccaatatc 104
||||||||||||||||||||||||
Sbjct: 77 gtttgattgagccgtgccaatatc 100
>41119_tcc-MIR171d:mirbase
Length = 117
Score = 48.1 bits (24), Expect = 2e-06
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 82 tttgattgagccgtgccaatatca 105
||||||||||||||||||||||||
Sbjct: 75 tttgattgagccgtgccaatatca 98
>40701_mtr-MIR171g:mirbase
Length = 105
Score = 48.1 bits (24), Expect = 2e-06
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 81 gtttgattgagccgtgccaatatc 104
||||||||||||||||||||||||
Sbjct: 77 gtttgattgagccgtgccaatatc 100
>40700_mtr-MIR171f:mirbase
Length = 95
Score = 48.1 bits (24), Expect = 2e-06
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 82 tttgattgagccgtgccaatatca 105
||||||||||||||||||||||||
Sbjct: 65 tttgattgagccgtgccaatatca 88
>40698_mtr-MIR171d:mirbase
Length = 105
Score = 48.1 bits (24), Expect = 2e-06
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 81 gtttgattgagccgtgccaatatc 104
||||||||||||||||||||||||
Sbjct: 77 gtttgattgagccgtgccaatatc 100
>40457_gma-MIR171c:mirbase
Length = 104
Score = 48.1 bits (24), Expect = 2e-06
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 82 tttgattgagccgtgccaatatca 105
||||||||||||||||||||||||
Sbjct: 70 tttgattgagccgtgccaatatca 93
>40359_rco-MIR171a:mirbase
Length = 92
Score = 48.1 bits (24), Expect = 2e-06
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 82 tttgattgagccgtgccaatatca 105
||||||||||||||||||||||||
Sbjct: 62 tttgattgagccgtgccaatatca 85
>40062_ath-MIR171c:mirbase
Length = 116
Score = 48.1 bits (24), Expect = 2e-06
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 82 tttgattgagccgtgccaatatca 105
||||||||||||||||||||||||
Sbjct: 85 tttgattgagccgtgccaatatca 108
>42769_zma-MIR171i:mirbase
Length = 104
Score = 46.1 bits (23), Expect = 6e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 83 ttgattgagccgtgccaatatca 105
|||||||||||||||||||||||
Sbjct: 64 ttgattgagccgtgccaatatca 86
>42766_zma-MIR171f:mirbase
Length = 155
Score = 46.1 bits (23), Expect = 6e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 83 ttgattgagccgtgccaatatca 105
|||||||||||||||||||||||
Sbjct: 114 ttgattgagccgtgccaatatca 136
>41389_ptc-MIR171i:mirbase
Length = 129
Score = 46.1 bits (23), Expect = 6e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 82 tttgattgagccgtgccaatatc 104
|||||||||||||||||||||||
Sbjct: 98 tttgattgagccgtgccaatatc 120
>41387_ptc-MIR171g:mirbase
Length = 100
Score = 46.1 bits (23), Expect = 6e-06
Identities = 32/35 (91%)
Strand = Plus / Plus
Query: 71 gggtgttttagtttgattgagccgtgccaatatca 105
|||| ||||| | ||||||||||||||||||||||
Sbjct: 58 gggtcttttaatctgattgagccgtgccaatatca 92
>41180_aqc-MIR171d:mirbase
Length = 106
Score = 46.1 bits (23), Expect = 6e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 82 tttgattgagccgtgccaatatc 104
|||||||||||||||||||||||
Sbjct: 82 tttgattgagccgtgccaatatc 104
>41120_tcc-MIR171e:mirbase
Length = 161
Score = 46.1 bits (23), Expect = 6e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 82 tttgattgagccgtgccaatatc 104
|||||||||||||||||||||||
Sbjct: 119 tttgattgagccgtgccaatatc 141
>40364_rco-MIR171f:mirbase
Length = 111
Score = 46.1 bits (23), Expect = 6e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 82 tttgattgagccgtgccaatatc 104
|||||||||||||||||||||||
Sbjct: 84 tttgattgagccgtgccaatatc 106
>40362_rco-MIR171d:mirbase
Length = 124
Score = 46.1 bits (23), Expect = 6e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 82 tttgattgagccgtgccaatatc 104
|||||||||||||||||||||||
Sbjct: 97 tttgattgagccgtgccaatatc 119
>42770_zma-MIR171j:mirbase
Length = 129
Score = 44.1 bits (22), Expect = 2e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 84 tgattgagccgtgccaatatca 105
||||||||||||||||||||||
Sbjct: 90 tgattgagccgtgccaatatca 111
>42547_sbi-MIR171b:mirbase
Length = 132
Score = 44.1 bits (22), Expect = 2e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 84 tgattgagccgtgccaatatca 105
||||||||||||||||||||||
Sbjct: 93 tgattgagccgtgccaatatca 114
>41986_osa-MIR171f:mirbase
Length = 127
Score = 44.1 bits (22), Expect = 2e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 84 tgattgagccgtgccaatatca 105
||||||||||||||||||||||
Sbjct: 97 tgattgagccgtgccaatatca 118
>41388_ptc-MIR171h:mirbase
Length = 100
Score = 44.1 bits (22), Expect = 2e-05
Identities = 31/34 (91%)
Strand = Plus / Plus
Query: 23 gatgttggaatggctcaatcaaatcagatctccc 56
|||||||| |||||||||||| |||| |||||||
Sbjct: 11 gatgttgggatggctcaatcatatcaaatctccc 44
Score = 44.1 bits (22), Expect = 2e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 84 tgattgagccgtgccaatatca 105
||||||||||||||||||||||
Sbjct: 71 tgattgagccgtgccaatatca 92
>41178_aqc-MIR171b:mirbase
Length = 77
Score = 44.1 bits (22), Expect = 2e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 25 tgttggaatggctcaatcaaat 46
||||||||||||||||||||||
Sbjct: 3 tgttggaatggctcaatcaaat 24
Score = 44.1 bits (22), Expect = 2e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 84 tgattgagccgtgccaatatca 105
||||||||||||||||||||||
Sbjct: 55 tgattgagccgtgccaatatca 76
>41123_tcc-MIR171h:mirbase
Length = 135
Score = 44.1 bits (22), Expect = 2e-05
Identities = 28/30 (93%)
Strand = Plus / Plus
Query: 75 gttttagtttgattgagccgtgccaatatc 104
||||| || |||||||||||||||||||||
Sbjct: 86 gttttggtctgattgagccgtgccaatatc 115
>40697_mtr-MIR171c:mirbase
Length = 105
Score = 44.1 bits (22), Expect = 2e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 82 tttgattgagccgtgccaatat 103
||||||||||||||||||||||
Sbjct: 78 tttgattgagccgtgccaatat 99
>40695_mtr-MIR171:mirbase
Length = 114
Score = 44.1 bits (22), Expect = 2e-05
Identities = 28/30 (93%)
Strand = Plus / Plus
Query: 77 tttagtttgattgagccgtgccaatatcat 106
|||||| |||||||| ||||||||||||||
Sbjct: 68 tttagtctgattgagtcgtgccaatatcat 97
>40454_gma-MIR171a:mirbase
Length = 102
Score = 44.1 bits (22), Expect = 2e-05
Identities = 28/30 (93%)
Strand = Plus / Plus
Query: 86 attgagccgtgccaatatcatgaactactg 115
|||||||||||||||||||| |||| ||||
Sbjct: 70 attgagccgtgccaatatcacgaaccactg 99
>42765_zma-MIR171e:mirbase
Length = 126
Score = 42.1 bits (21), Expect = 1e-04
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 84 tgattgagccgtgccaatatc 104
|||||||||||||||||||||
Sbjct: 87 tgattgagccgtgccaatatc 107
>42764_zma-MIR171d:mirbase
Length = 121
Score = 42.1 bits (21), Expect = 1e-04
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 84 tgattgagccgtgccaatatc 104
|||||||||||||||||||||
Sbjct: 82 tgattgagccgtgccaatatc 102
>42641_tae-MIR171b:mirbase
Length = 138
Score = 42.1 bits (21), Expect = 1e-04
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 85 gattgagccgtgccaatatca 105
|||||||||||||||||||||
Sbjct: 90 gattgagccgtgccaatatca 110
>42640_tae-MIR171a:mirbase
Length = 130
Score = 42.1 bits (21), Expect = 1e-04
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 84 tgattgagccgtgccaatatc 104
|||||||||||||||||||||
Sbjct: 89 tgattgagccgtgccaatatc 109
>42554_sbi-MIR171i:mirbase
Length = 90
Score = 42.1 bits (21), Expect = 1e-04
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 84 tgattgagccgtgccaatatc 104
|||||||||||||||||||||
Sbjct: 68 tgattgagccgtgccaatatc 88
>42549_sbi-MIR171d:mirbase
Length = 153
Score = 42.1 bits (21), Expect = 1e-04
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 84 tgattgagccgtgccaatatc 104
|||||||||||||||||||||
Sbjct: 114 tgattgagccgtgccaatatc 134
>41985_osa-MIR171e:mirbase
Length = 119
Score = 42.1 bits (21), Expect = 1e-04
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 84 tgattgagccgtgccaatatc 104
|||||||||||||||||||||
Sbjct: 89 tgattgagccgtgccaatatc 109
>41984_osa-MIR171d:mirbase
Length = 135
Score = 42.1 bits (21), Expect = 1e-04
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 84 tgattgagccgtgccaatatc 104
|||||||||||||||||||||
Sbjct: 105 tgattgagccgtgccaatatc 125
>41890_hvu-MIR171:mirbase
Length = 173
Score = 42.1 bits (21), Expect = 1e-04
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 84 tgattgagccgtgccaatatc 104
|||||||||||||||||||||
Sbjct: 112 tgattgagccgtgccaatatc 132
>41874_far-MIR171:mirbase
Length = 130
Score = 42.1 bits (21), Expect = 1e-04
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 84 tgattgagccgtgccaatatc 104
|||||||||||||||||||||
Sbjct: 90 tgattgagccgtgccaatatc 110
>41765_bdi-MIR171b:mirbase
Length = 164
Score = 42.1 bits (21), Expect = 1e-04
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 84 tgattgagccgtgccaatatc 104
|||||||||||||||||||||
Sbjct: 114 tgattgagccgtgccaatatc 134
>41386_ptc-MIR171f:mirbase
Length = 130
Score = 42.1 bits (21), Expect = 1e-04
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 84 tgattgagccgtgccaatatc 104
|||||||||||||||||||||
Sbjct: 101 tgattgagccgtgccaatatc 121
>41385_ptc-MIR171e:mirbase
Length = 94
Score = 42.1 bits (21), Expect = 1e-04
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 84 tgattgagccgtgccaatatc 104
|||||||||||||||||||||
Sbjct: 65 tgattgagccgtgccaatatc 85
>40361_rco-MIR171c:mirbase
Length = 87
Score = 42.1 bits (21), Expect = 1e-04
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 84 tgattgagccgtgccaatatc 104
|||||||||||||||||||||
Sbjct: 62 tgattgagccgtgccaatatc 82
>40321_bra-MIR171d:mirbase
Length = 101
Score = 42.1 bits (21), Expect = 1e-04
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 85 gattgagccgtgccaatatca 105
|||||||||||||||||||||
Sbjct: 71 gattgagccgtgccaatatca 91
