miRNEST 2.0: an integrative microRNA resource miRNEST 2.0, an integrative microRNA resource :: BLAST


>41320_ptc-MIR164e:mirbase
          Length = 155

 Score = 83.8 bits (42), Expect = 7e-17
 Identities = 42/42 (100%)
 Strand = Plus / Plus

                                                    
Query: 3  tgagcaagatggagaagcagggcacgtgcattactaactcat 44
          ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2  tgagcaagatggagaagcagggcacgtgcattactaactcat 43




>41278_ctr-MIR164:mirbase
          Length = 297

 Score = 79.8 bits (40), Expect = 1e-15
 Identities = 40/40 (100%)
 Strand = Plus / Plus

                                                  
Query: 4  gagcaagatggagaagcagggcacgtgcattactaactca 43
          ||||||||||||||||||||||||||||||||||||||||
Sbjct: 14 gagcaagatggagaagcagggcacgtgcattactaactca 53



 Score = 40.1 bits (20), Expect = 0.001
 Identities = 26/28 (92%)
 Strand = Plus / Plus

                                       
Query: 254 ttcatgtgcccatcttcgccatcatgac 281
           ||||||||||| ||||| ||||||||||
Sbjct: 169 ttcatgtgcccttcttccccatcatgac 196




>41221_csi-MIR164:mirbase
          Length = 278

 Score = 79.8 bits (40), Expect = 1e-15
 Identities = 40/40 (100%)
 Strand = Plus / Plus

                                                  
Query: 4  gagcaagatggagaagcagggcacgtgcattactaactca 43
          ||||||||||||||||||||||||||||||||||||||||
Sbjct: 6  gagcaagatggagaagcagggcacgtgcattactaactca 45



 Score = 40.1 bits (20), Expect = 0.001
 Identities = 26/28 (92%)
 Strand = Plus / Plus

                                       
Query: 254 ttcatgtgcccatcttcgccatcatgac 281
           ||||||||||| ||||| ||||||||||
Sbjct: 161 ttcatgtgcccttcttccccatcatgac 188




>41581_vvi-MIR164c:mirbase
          Length = 97

 Score = 75.8 bits (38), Expect = 2e-14
 Identities = 41/42 (97%)
 Strand = Plus / Plus

                                                    
Query: 3  tgagcaagatggagaagcagggcacgtgcattactaactcat 44
          |||||||||||||||||||||||||||||||||||| |||||
Sbjct: 2  tgagcaagatggagaagcagggcacgtgcattactagctcat 43




>41317_ptc-MIR164b:mirbase
          Length = 162

 Score = 75.8 bits (38), Expect = 2e-14
 Identities = 41/42 (97%)
 Strand = Plus / Plus

                                                    
Query: 3  tgagcaagatggagaagcagggcacgtgcattactaactcat 44
          |||||||||||||||||||||||||||||| |||||||||||
Sbjct: 2  tgagcaagatggagaagcagggcacgtgcactactaactcat 43




>40345_rco-MIR164c:mirbase
          Length = 116

 Score = 75.8 bits (38), Expect = 2e-14
 Identities = 38/38 (100%)
 Strand = Plus / Plus

                                                
Query: 7  caagatggagaagcagggcacgtgcattactaactcat 44
          ||||||||||||||||||||||||||||||||||||||
Sbjct: 1  caagatggagaagcagggcacgtgcattactaactcat 38



 Score = 40.1 bits (20), Expect = 0.001
 Identities = 26/28 (92%)
 Strand = Plus / Plus

                                       
Query: 254 ttcatgtgcccatcttcgccatcatgac 281
           ||||||||||| ||||| ||||||||||
Sbjct: 89  ttcatgtgcccgtcttccccatcatgac 116




>40665_mtr-MIR164b:mirbase
          Length = 144

 Score = 67.9 bits (34), Expect = 4e-12
 Identities = 37/38 (97%)
 Strand = Plus / Plus

                                                
Query: 7  caagatggagaagcagggcacgtgcattactaactcat 44
          |||||||||||||||||||||||||| |||||||||||
Sbjct: 1  caagatggagaagcagggcacgtgcaatactaactcat 38



 Score = 44.1 bits (22), Expect = 6e-05
 Identities = 34/38 (89%)
 Strand = Plus / Plus

                                                 
Query: 243 tgagttagtggttcatgtgcccatcttcgccatcatga 280
           |||||||||  ||||||||||| ||||| |||||||||
Sbjct: 107 tgagttagttcttcatgtgcccctcttccccatcatga 144




>39817_aly-MIR164b:mirbase
          Length = 161

 Score = 63.9 bits (32), Expect = 6e-11
 Identities = 35/36 (97%)
 Strand = Plus / Plus

                                              
Query: 10 gatggagaagcagggcacgtgcattactaactcatc 45
          ||||||||||||||||||||||||||||| ||||||
Sbjct: 1  gatggagaagcagggcacgtgcattactagctcatc 36



 Score = 44.1 bits (22), Expect = 6e-05
 Identities = 31/34 (91%)
 Strand = Plus / Plus

                                             
Query: 243 tgagttagtggttcatgtgcccatcttcgccatc 276
           |||||||||  ||||||||||||||||| |||||
Sbjct: 128 tgagttagttcttcatgtgcccatcttcaccatc 161




>40028_ath-MIR164b:mirbase
          Length = 153

 Score = 61.9 bits (31), Expect = 2e-10
 Identities = 34/35 (97%)
 Strand = Plus / Plus

                                             
Query: 10 gatggagaagcagggcacgtgcattactaactcat 44
          ||||||||||||||||||||||||||||| |||||
Sbjct: 1  gatggagaagcagggcacgtgcattactagctcat 35



 Score = 44.1 bits (22), Expect = 6e-05
 Identities = 31/34 (91%)
 Strand = Plus / Plus

                                             
Query: 243 tgagttagtggttcatgtgcccatcttcgccatc 276
           |||||||||  ||||||||||||||||| |||||
Sbjct: 120 tgagttagttcttcatgtgcccatcttcaccatc 153




>42710_zma-MIR164b:mirbase
          Length = 128

 Score = 50.1 bits (25), Expect = 9e-07
 Identities = 25/25 (100%)
 Strand = Plus / Plus

                                   
Query: 12 tggagaagcagggcacgtgcattac 36
          |||||||||||||||||||||||||
Sbjct: 21 tggagaagcagggcacgtgcattac 45




>42503_sbi-MIR164:mirbase
          Length = 126

 Score = 50.1 bits (25), Expect = 9e-07
 Identities = 25/25 (100%)
 Strand = Plus / Plus

                                   
Query: 12 tggagaagcagggcacgtgcattac 36
          |||||||||||||||||||||||||
Sbjct: 1  tggagaagcagggcacgtgcattac 25




>41932_osa-MIR164b:mirbase
          Length = 109

 Score = 50.1 bits (25), Expect = 9e-07
 Identities = 25/25 (100%)
 Strand = Plus / Plus

                                   
Query: 12 tggagaagcagggcacgtgcattac 36
          |||||||||||||||||||||||||
Sbjct: 9  tggagaagcagggcacgtgcattac 33




>42711_zma-MIR164c:mirbase
          Length = 270

 Score = 46.1 bits (23), Expect = 1e-05
 Identities = 23/23 (100%)
 Strand = Plus / Plus

                                 
Query: 12 tggagaagcagggcacgtgcatt 34
          |||||||||||||||||||||||
Sbjct: 18 tggagaagcagggcacgtgcatt 40




>41936_osa-MIR164f:mirbase
          Length = 210

 Score = 46.1 bits (23), Expect = 1e-05
 Identities = 23/23 (100%)
 Strand = Plus / Plus

                                 
Query: 12 tggagaagcagggcacgtgcatt 34
          |||||||||||||||||||||||
Sbjct: 24 tggagaagcagggcacgtgcatt 46




>41742_bdi-MIR164f:mirbase
          Length = 161

 Score = 46.1 bits (23), Expect = 1e-05
 Identities = 23/23 (100%)
 Strand = Plus / Minus

                                  
Query: 12  tggagaagcagggcacgtgcatt 34
           |||||||||||||||||||||||
Sbjct: 144 tggagaagcagggcacgtgcatt 122




>41737_bdi-MIR164a:mirbase
          Length = 193

 Score = 46.1 bits (23), Expect = 1e-05
 Identities = 23/23 (100%)
 Strand = Plus / Plus

                                 
Query: 12 tggagaagcagggcacgtgcatt 34
          |||||||||||||||||||||||
Sbjct: 31 tggagaagcagggcacgtgcatt 53




>41582_vvi-MIR164d:mirbase
          Length = 118

 Score = 46.1 bits (23), Expect = 1e-05
 Identities = 23/23 (100%)
 Strand = Plus / Plus

                                 
Query: 10 gatggagaagcagggcacgtgca 32
          |||||||||||||||||||||||
Sbjct: 9  gatggagaagcagggcacgtgca 31




>42712_zma-MIR164d:mirbase
          Length = 216

 Score = 44.1 bits (22), Expect = 6e-05
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                
Query: 12 tggagaagcagggcacgtgcat 33
          ||||||||||||||||||||||
Sbjct: 20 tggagaagcagggcacgtgcat 41




>42709_zma-MIR164a:mirbase
          Length = 152

 Score = 44.1 bits (22), Expect = 6e-05
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                
Query: 12 tggagaagcagggcacgtgcat 33
          ||||||||||||||||||||||
Sbjct: 19 tggagaagcagggcacgtgcat 40




>42637_tae-MIR164:mirbase
          Length = 156

 Score = 44.1 bits (22), Expect = 6e-05
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                
Query: 12 tggagaagcagggcacgtgcat 33
          ||||||||||||||||||||||
Sbjct: 3  tggagaagcagggcacgtgcat 24




>42506_sbi-MIR164d:mirbase
          Length = 160

 Score = 44.1 bits (22), Expect = 6e-05
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                
Query: 12 tggagaagcagggcacgtgcat 33
          ||||||||||||||||||||||
Sbjct: 1  tggagaagcagggcacgtgcat 22




>41931_osa-MIR164a:mirbase
          Length = 156

 Score = 44.1 bits (22), Expect = 6e-05
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                
Query: 12 tggagaagcagggcacgtgcat 33
          ||||||||||||||||||||||
Sbjct: 17 tggagaagcagggcacgtgcat 38




>41740_bdi-MIR164d:mirbase
          Length = 186

 Score = 44.1 bits (22), Expect = 6e-05
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                
Query: 12 tggagaagcagggcacgtgcat 33
          ||||||||||||||||||||||
Sbjct: 18 tggagaagcagggcacgtgcat 39




>41738_bdi-MIR164b:mirbase
          Length = 209

 Score = 44.1 bits (22), Expect = 6e-05
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                
Query: 12 tggagaagcagggcacgtgcat 33
          ||||||||||||||||||||||
Sbjct: 33 tggagaagcagggcacgtgcat 54




>40029_ath-MIR164c:mirbase
          Length = 102

 Score = 44.1 bits (22), Expect = 6e-05
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                
Query: 10 gatggagaagcagggcacgtgc 31
          ||||||||||||||||||||||
Sbjct: 9  gatggagaagcagggcacgtgc 30




>39818_aly-MIR164c:mirbase
          Length = 115

 Score = 44.1 bits (22), Expect = 6e-05
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                
Query: 10 gatggagaagcagggcacgtgc 31
          ||||||||||||||||||||||
Sbjct: 16 gatggagaagcagggcacgtgc 37




>42715_zma-MIR164g:mirbase
          Length = 171

 Score = 42.1 bits (21), Expect = 2e-04
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                               
Query: 12 tggagaagcagggcacgtgca 32
          |||||||||||||||||||||
Sbjct: 2  tggagaagcagggcacgtgca 22




>42507_sbi-MIR164e:mirbase
          Length = 205

 Score = 42.1 bits (21), Expect = 2e-04
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                               
Query: 12 tggagaagcagggcacgtgca 32
          |||||||||||||||||||||
Sbjct: 3  tggagaagcagggcacgtgca 23




>41741_bdi-MIR164e:mirbase
          Length = 127

 Score = 42.1 bits (21), Expect = 2e-04
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                               
Query: 12 tggagaagcagggcacgtgca 32
          |||||||||||||||||||||
Sbjct: 19 tggagaagcagggcacgtgca 39




>41579_vvi-MIR164a:mirbase
          Length = 121

 Score = 42.1 bits (21), Expect = 2e-04
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                               
Query: 12 tggagaagcagggcacgtgca 32
          |||||||||||||||||||||
Sbjct: 11 tggagaagcagggcacgtgca 31




>41319_ptc-MIR164d:mirbase
          Length = 99

 Score = 42.1 bits (21), Expect = 2e-04
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                               
Query: 12 tggagaagcagggcacgtgca 32
          |||||||||||||||||||||
Sbjct: 11 tggagaagcagggcacgtgca 31




>41318_ptc-MIR164c:mirbase
          Length = 82

 Score = 42.1 bits (21), Expect = 2e-04
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                               
Query: 12 tggagaagcagggcacgtgca 32
          |||||||||||||||||||||
Sbjct: 11 tggagaagcagggcacgtgca 31




>41316_ptc-MIR164a:mirbase
          Length = 85

 Score = 42.1 bits (21), Expect = 2e-04
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                               
Query: 12 tggagaagcagggcacgtgca 32
          |||||||||||||||||||||
Sbjct: 11 tggagaagcagggcacgtgca 31




>41092_tcc-MIR164b:mirbase
          Length = 130

 Score = 42.1 bits (21), Expect = 2e-04
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                               
Query: 12 tggagaagcagggcacgtgca 32
          |||||||||||||||||||||
Sbjct: 21 tggagaagcagggcacgtgca 41




>41091_tcc-MIR164a:mirbase
          Length = 128

 Score = 42.1 bits (21), Expect = 2e-04
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                               
Query: 12 tggagaagcagggcacgtgca 32
          |||||||||||||||||||||
Sbjct: 21 tggagaagcagggcacgtgca 41




>41047_ghr-MIR164:mirbase
          Length = 101

 Score = 42.1 bits (21), Expect = 2e-04
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                               
Query: 12 tggagaagcagggcacgtgca 32
          |||||||||||||||||||||
Sbjct: 19 tggagaagcagggcacgtgca 39




>40666_mtr-MIR164c:mirbase
          Length = 86

 Score = 42.1 bits (21), Expect = 2e-04
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                               
Query: 12 tggagaagcagggcacgtgca 32
          |||||||||||||||||||||
Sbjct: 6  tggagaagcagggcacgtgca 26




>40664_mtr-MIR164a:mirbase
          Length = 99

 Score = 42.1 bits (21), Expect = 2e-04
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                               
Query: 12 tggagaagcagggcacgtgca 32
          |||||||||||||||||||||
Sbjct: 6  tggagaagcagggcacgtgca 26




>40438_gma-MIR164:mirbase
          Length = 95

 Score = 42.1 bits (21), Expect = 2e-04
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                               
Query: 12 tggagaagcagggcacgtgca 32
          |||||||||||||||||||||
Sbjct: 11 tggagaagcagggcacgtgca 31




>40344_rco-MIR164b:mirbase
          Length = 104

 Score = 42.1 bits (21), Expect = 2e-04
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                               
Query: 12 tggagaagcagggcacgtgca 32
          |||||||||||||||||||||
Sbjct: 6  tggagaagcagggcacgtgca 26




>40343_rco-MIR164a:mirbase
          Length = 78

 Score = 42.1 bits (21), Expect = 2e-04
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                               
Query: 12 tggagaagcagggcacgtgca 32
          |||||||||||||||||||||
Sbjct: 6  tggagaagcagggcacgtgca 26




>40313_bra-MIR164a:mirbase
          Length = 92

 Score = 42.1 bits (21), Expect = 2e-04
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                               
Query: 12 tggagaagcagggcacgtgca 32
          |||||||||||||||||||||
Sbjct: 10 tggagaagcagggcacgtgca 30




>40263_bna-MIR164:mirbase
          Length = 86

 Score = 42.1 bits (21), Expect = 2e-04
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                               
Query: 12 tggagaagcagggcacgtgca 32
          |||||||||||||||||||||
Sbjct: 7  tggagaagcagggcacgtgca 27




>40027_ath-MIR164a:mirbase
          Length = 113

 Score = 42.1 bits (21), Expect = 2e-04
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                               
Query: 12 tggagaagcagggcacgtgca 32
          |||||||||||||||||||||
Sbjct: 19 tggagaagcagggcacgtgca 39




>39816_aly-MIR164a:mirbase
          Length = 79

 Score = 42.1 bits (21), Expect = 2e-04
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                               
Query: 12 tggagaagcagggcacgtgca 32
          |||||||||||||||||||||
Sbjct: 3  tggagaagcagggcacgtgca 23




>42714_zma-MIR164f:mirbase
          Length = 108

 Score = 40.1 bits (20), Expect = 0.001
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                              
Query: 12 tggagaagcagggcacgtgc 31
          ||||||||||||||||||||
Sbjct: 2  tggagaagcagggcacgtgc 21




>42504_sbi-MIR164b:mirbase
          Length = 111

 Score = 40.1 bits (20), Expect = 0.001
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                              
Query: 12 tggagaagcagggcacgtgc 31
          ||||||||||||||||||||
Sbjct: 21 tggagaagcagggcacgtgc 40




>41934_osa-MIR164d:mirbase
          Length = 94

 Score = 40.1 bits (20), Expect = 0.001
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                              
Query: 12 tggagaagcagggcacgtgc 31
          ||||||||||||||||||||
Sbjct: 11 tggagaagcagggcacgtgc 30




>41739_bdi-MIR164c:mirbase
          Length = 138

 Score = 40.1 bits (20), Expect = 0.001
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                              
Query: 12 tggagaagcagggcacgtgc 31
          ||||||||||||||||||||
Sbjct: 34 tggagaagcagggcacgtgc 53