miRNEST 2.0: an integrative microRNA resource miRNEST 2.0, an integrative microRNA resource :: BLAST


>46505_miR408:micropc
          Length = 83

 Score = 54.0 bits (27), Expect = 3e-08
 Identities = 70/82 (85%), Gaps = 3/82 (3%)
 Strand = Plus / Plus

                                                                       
Query: 34  gggaacagacagagcatggatagagcttacttacagaaacccttttgttttgacccttcc 93
           |||||||| |||||||||||| ||||| ||| ||||||   |||  |||||| | || ||
Sbjct: 5   gggaacaggcagagcatggatggagct-actaacagaagtactt--gttttggctctacc 61

                                 
Query: 94  catgcactgcctcttccctggc 115
           ||||||||||||||||||||||
Sbjct: 62  catgcactgcctcttccctggc 83




>46052_miR408:micropc
          Length = 83

 Score = 54.0 bits (27), Expect = 3e-08
 Identities = 70/82 (85%), Gaps = 3/82 (3%)
 Strand = Plus / Plus

                                                                       
Query: 34  gggaacagacagagcatggatagagcttacttacagaaacccttttgttttgacccttcc 93
           |||||||| |||||||||||| ||||| ||| ||||||   |||  |||||| | || ||
Sbjct: 5   gggaacaggcagagcatggatggagct-actaacagaagtactt--gttttggctctacc 61

                                 
Query: 94  catgcactgcctcttccctggc 115
           ||||||||||||||||||||||
Sbjct: 62  catgcactgcctcttccctggc 83




>45593_miR408:micropc
          Length = 85

 Score = 54.0 bits (27), Expect = 3e-08
 Identities = 70/82 (85%), Gaps = 3/82 (3%)
 Strand = Plus / Plus

                                                                       
Query: 34  gggaacagacagagcatggatagagcttacttacagaaacccttttgttttgacccttcc 93
           |||||||| |||||||||||| ||||| ||| ||||||   |||  |||||| | || ||
Sbjct: 6   gggaacaggcagagcatggatggagct-actaacagaagtactt--gttttggctctacc 62

                                 
Query: 94  catgcactgcctcttccctggc 115
           ||||||||||||||||||||||
Sbjct: 63  catgcactgcctcttccctggc 84




>46401_miR408:micropc
          Length = 83

 Score = 50.1 bits (25), Expect = 5e-07
 Identities = 34/37 (91%)
 Strand = Plus / Plus

                                                
Query: 79  tgttttgacccttcccatgcactgcctcttccctggc 115
           ||||||| | || ||||||||||||||||||||||||
Sbjct: 47  tgttttggctctacccatgcactgcctcttccctggc 83




>45814_miR408:micropc
          Length = 85

 Score = 50.1 bits (25), Expect = 5e-07
 Identities = 34/37 (91%)
 Strand = Plus / Plus

                                                
Query: 79  tgttttgacccttcccatgcactgcctcttccctggc 115
           ||||||| | || ||||||||||||||||||||||||
Sbjct: 48  tgttttggctctacccatgcactgcctcttccctggc 84




>45726_miR408:micropc
          Length = 83

 Score = 50.1 bits (25), Expect = 5e-07
 Identities = 34/37 (91%)
 Strand = Plus / Plus

                                                
Query: 79  tgttttgacccttcccatgcactgcctcttccctggc 115
           ||||||| | || ||||||||||||||||||||||||
Sbjct: 47  tgttttggctctacccatgcactgcctcttccctggc 83




>46728_miR408:micropc
          Length = 87

 Score = 44.1 bits (22), Expect = 3e-05
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                 
Query: 94  catgcactgcctcttccctggc 115
           ||||||||||||||||||||||
Sbjct: 66  catgcactgcctcttccctggc 87




>46359_miR408:micropc
          Length = 85

 Score = 44.1 bits (22), Expect = 3e-05
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                 
Query: 94  catgcactgcctcttccctggc 115
           ||||||||||||||||||||||
Sbjct: 63  catgcactgcctcttccctggc 84



 Score = 42.1 bits (21), Expect = 1e-04
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                   
Query: 30 ggctgggaacagacagagcatggat 54
          |||||||||||| ||||||||||||
Sbjct: 1  ggctgggaacaggcagagcatggat 25




>46309_miR408:micropc
          Length = 83

 Score = 44.1 bits (22), Expect = 3e-05
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                 
Query: 94  catgcactgcctcttccctggc 115
           ||||||||||||||||||||||
Sbjct: 62  catgcactgcctcttccctggc 83



 Score = 40.1 bits (20), Expect = 4e-04
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                  
Query: 31 gctgggaacagacagagcatggat 54
          ||||||||||| ||||||||||||
Sbjct: 1  gctgggaacaggcagagcatggat 24




>46159_miR408:micropc
          Length = 87

 Score = 44.1 bits (22), Expect = 3e-05
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                 
Query: 94  catgcactgcctcttccctggc 115
           ||||||||||||||||||||||
Sbjct: 66  catgcactgcctcttccctggc 87




>46155_miR408:micropc
          Length = 83

 Score = 44.1 bits (22), Expect = 3e-05
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                 
Query: 94  catgcactgcctcttccctggc 115
           ||||||||||||||||||||||
Sbjct: 62  catgcactgcctcttccctggc 83



 Score = 40.1 bits (20), Expect = 4e-04
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                  
Query: 31 gctgggaacagacagagcatggat 54
          ||||||||||| ||||||||||||
Sbjct: 1  gctgggaacaggcagagcatggat 24




>45949_miR408:micropc
          Length = 99

 Score = 44.1 bits (22), Expect = 3e-05
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                 
Query: 94  catgcactgcctcttccctggc 115
           ||||||||||||||||||||||
Sbjct: 78  catgcactgcctcttccctggc 99




>45860_miR408:micropc
          Length = 87

 Score = 44.1 bits (22), Expect = 3e-05
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                 
Query: 94  catgcactgcctcttccctggc 115
           ||||||||||||||||||||||
Sbjct: 66  catgcactgcctcttccctggc 87




>45551_miR408:micropc
          Length = 99

 Score = 44.1 bits (22), Expect = 3e-05
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                 
Query: 94  catgcactgcctcttccctggc 115
           ||||||||||||||||||||||
Sbjct: 78  catgcactgcctcttccctggc 99




>45531_miR408:micropc
          Length = 89

 Score = 44.1 bits (22), Expect = 3e-05
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                 
Query: 94  catgcactgcctcttccctggc 115
           ||||||||||||||||||||||
Sbjct: 67  catgcactgcctcttccctggc 88




>45398_miR408:micropc
          Length = 89

 Score = 44.1 bits (22), Expect = 3e-05
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                 
Query: 94  catgcactgcctcttccctggc 115
           ||||||||||||||||||||||
Sbjct: 67  catgcactgcctcttccctggc 88




>45394_miR408:micropc
          Length = 112

 Score = 44.1 bits (22), Expect = 3e-05
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                 
Query: 94  catgcactgcctcttccctggc 115
           ||||||||||||||||||||||
Sbjct: 90  catgcactgcctcttccctggc 111




>45090_miR408:micropc
          Length = 87

 Score = 44.1 bits (22), Expect = 3e-05
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                 
Query: 94  catgcactgcctcttccctggc 115
           ||||||||||||||||||||||
Sbjct: 66  catgcactgcctcttccctggc 87




>44968_miR408:micropc
          Length = 110

 Score = 44.1 bits (22), Expect = 3e-05
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                 
Query: 94  catgcactgcctcttccctggc 115
           ||||||||||||||||||||||
Sbjct: 89  catgcactgcctcttccctggc 110




>44861_miR408:micropc
          Length = 121

 Score = 44.1 bits (22), Expect = 3e-05
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                 
Query: 94  catgcactgcctcttccctggc 115
           ||||||||||||||||||||||
Sbjct: 99  catgcactgcctcttccctggc 120




>44821_miR408:micropc
          Length = 119

 Score = 44.1 bits (22), Expect = 3e-05
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                 
Query: 94  catgcactgcctcttccctggc 115
           ||||||||||||||||||||||
Sbjct: 98  catgcactgcctcttccctggc 119