miRNEST 2.0, an integrative microRNA resource :: BLAST
>46505_miR408:micropc
Length = 83
Score = 54.0 bits (27), Expect = 3e-08
Identities = 70/82 (85%), Gaps = 3/82 (3%)
Strand = Plus / Plus
Query: 34 gggaacagacagagcatggatagagcttacttacagaaacccttttgttttgacccttcc 93
|||||||| |||||||||||| ||||| ||| |||||| ||| |||||| | || ||
Sbjct: 5 gggaacaggcagagcatggatggagct-actaacagaagtactt--gttttggctctacc 61
Query: 94 catgcactgcctcttccctggc 115
||||||||||||||||||||||
Sbjct: 62 catgcactgcctcttccctggc 83
>46052_miR408:micropc
Length = 83
Score = 54.0 bits (27), Expect = 3e-08
Identities = 70/82 (85%), Gaps = 3/82 (3%)
Strand = Plus / Plus
Query: 34 gggaacagacagagcatggatagagcttacttacagaaacccttttgttttgacccttcc 93
|||||||| |||||||||||| ||||| ||| |||||| ||| |||||| | || ||
Sbjct: 5 gggaacaggcagagcatggatggagct-actaacagaagtactt--gttttggctctacc 61
Query: 94 catgcactgcctcttccctggc 115
||||||||||||||||||||||
Sbjct: 62 catgcactgcctcttccctggc 83
>45593_miR408:micropc
Length = 85
Score = 54.0 bits (27), Expect = 3e-08
Identities = 70/82 (85%), Gaps = 3/82 (3%)
Strand = Plus / Plus
Query: 34 gggaacagacagagcatggatagagcttacttacagaaacccttttgttttgacccttcc 93
|||||||| |||||||||||| ||||| ||| |||||| ||| |||||| | || ||
Sbjct: 6 gggaacaggcagagcatggatggagct-actaacagaagtactt--gttttggctctacc 62
Query: 94 catgcactgcctcttccctggc 115
||||||||||||||||||||||
Sbjct: 63 catgcactgcctcttccctggc 84
>46401_miR408:micropc
Length = 83
Score = 50.1 bits (25), Expect = 5e-07
Identities = 34/37 (91%)
Strand = Plus / Plus
Query: 79 tgttttgacccttcccatgcactgcctcttccctggc 115
||||||| | || ||||||||||||||||||||||||
Sbjct: 47 tgttttggctctacccatgcactgcctcttccctggc 83
>45814_miR408:micropc
Length = 85
Score = 50.1 bits (25), Expect = 5e-07
Identities = 34/37 (91%)
Strand = Plus / Plus
Query: 79 tgttttgacccttcccatgcactgcctcttccctggc 115
||||||| | || ||||||||||||||||||||||||
Sbjct: 48 tgttttggctctacccatgcactgcctcttccctggc 84
>45726_miR408:micropc
Length = 83
Score = 50.1 bits (25), Expect = 5e-07
Identities = 34/37 (91%)
Strand = Plus / Plus
Query: 79 tgttttgacccttcccatgcactgcctcttccctggc 115
||||||| | || ||||||||||||||||||||||||
Sbjct: 47 tgttttggctctacccatgcactgcctcttccctggc 83
>46728_miR408:micropc
Length = 87
Score = 44.1 bits (22), Expect = 3e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 94 catgcactgcctcttccctggc 115
||||||||||||||||||||||
Sbjct: 66 catgcactgcctcttccctggc 87
>46359_miR408:micropc
Length = 85
Score = 44.1 bits (22), Expect = 3e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 94 catgcactgcctcttccctggc 115
||||||||||||||||||||||
Sbjct: 63 catgcactgcctcttccctggc 84
Score = 42.1 bits (21), Expect = 1e-04
Identities = 24/25 (96%)
Strand = Plus / Plus
Query: 30 ggctgggaacagacagagcatggat 54
|||||||||||| ||||||||||||
Sbjct: 1 ggctgggaacaggcagagcatggat 25
>46309_miR408:micropc
Length = 83
Score = 44.1 bits (22), Expect = 3e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 94 catgcactgcctcttccctggc 115
||||||||||||||||||||||
Sbjct: 62 catgcactgcctcttccctggc 83
Score = 40.1 bits (20), Expect = 4e-04
Identities = 23/24 (95%)
Strand = Plus / Plus
Query: 31 gctgggaacagacagagcatggat 54
||||||||||| ||||||||||||
Sbjct: 1 gctgggaacaggcagagcatggat 24
>46159_miR408:micropc
Length = 87
Score = 44.1 bits (22), Expect = 3e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 94 catgcactgcctcttccctggc 115
||||||||||||||||||||||
Sbjct: 66 catgcactgcctcttccctggc 87
>46155_miR408:micropc
Length = 83
Score = 44.1 bits (22), Expect = 3e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 94 catgcactgcctcttccctggc 115
||||||||||||||||||||||
Sbjct: 62 catgcactgcctcttccctggc 83
Score = 40.1 bits (20), Expect = 4e-04
Identities = 23/24 (95%)
Strand = Plus / Plus
Query: 31 gctgggaacagacagagcatggat 54
||||||||||| ||||||||||||
Sbjct: 1 gctgggaacaggcagagcatggat 24
>45949_miR408:micropc
Length = 99
Score = 44.1 bits (22), Expect = 3e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 94 catgcactgcctcttccctggc 115
||||||||||||||||||||||
Sbjct: 78 catgcactgcctcttccctggc 99
>45860_miR408:micropc
Length = 87
Score = 44.1 bits (22), Expect = 3e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 94 catgcactgcctcttccctggc 115
||||||||||||||||||||||
Sbjct: 66 catgcactgcctcttccctggc 87
>45551_miR408:micropc
Length = 99
Score = 44.1 bits (22), Expect = 3e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 94 catgcactgcctcttccctggc 115
||||||||||||||||||||||
Sbjct: 78 catgcactgcctcttccctggc 99
>45531_miR408:micropc
Length = 89
Score = 44.1 bits (22), Expect = 3e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 94 catgcactgcctcttccctggc 115
||||||||||||||||||||||
Sbjct: 67 catgcactgcctcttccctggc 88
>45398_miR408:micropc
Length = 89
Score = 44.1 bits (22), Expect = 3e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 94 catgcactgcctcttccctggc 115
||||||||||||||||||||||
Sbjct: 67 catgcactgcctcttccctggc 88
>45394_miR408:micropc
Length = 112
Score = 44.1 bits (22), Expect = 3e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 94 catgcactgcctcttccctggc 115
||||||||||||||||||||||
Sbjct: 90 catgcactgcctcttccctggc 111
>45090_miR408:micropc
Length = 87
Score = 44.1 bits (22), Expect = 3e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 94 catgcactgcctcttccctggc 115
||||||||||||||||||||||
Sbjct: 66 catgcactgcctcttccctggc 87
>44968_miR408:micropc
Length = 110
Score = 44.1 bits (22), Expect = 3e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 94 catgcactgcctcttccctggc 115
||||||||||||||||||||||
Sbjct: 89 catgcactgcctcttccctggc 110
>44861_miR408:micropc
Length = 121
Score = 44.1 bits (22), Expect = 3e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 94 catgcactgcctcttccctggc 115
||||||||||||||||||||||
Sbjct: 99 catgcactgcctcttccctggc 120
>44821_miR408:micropc
Length = 119
Score = 44.1 bits (22), Expect = 3e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 94 catgcactgcctcttccctggc 115
||||||||||||||||||||||
Sbjct: 98 catgcactgcctcttccctggc 119