miRNEST 2.0, an integrative microRNA resource :: BLAST
>48560_gma-miR168:pmrd
Length = 125
Score = 71.9 bits (36), Expect = 1e-13
Identities = 36/36 (100%)
Strand = Plus / Plus
Query: 14 gcggtctctaattcgcttggtgcaggtcgggaaccg 49
||||||||||||||||||||||||||||||||||||
Sbjct: 7 gcggtctctaattcgcttggtgcaggtcgggaaccg 42
Score = 58.0 bits (29), Expect = 2e-09
Identities = 29/29 (100%)
Strand = Plus / Plus
Query: 117 ggatcccgccttgcatcaactgaatcgga 145
|||||||||||||||||||||||||||||
Sbjct: 84 ggatcccgccttgcatcaactgaatcgga 112
>54802_vvi-miR168:pmrd
Length = 132
Score = 67.9 bits (34), Expect = 2e-12
Identities = 34/34 (100%)
Strand = Plus / Plus
Query: 16 ggtctctaattcgcttggtgcaggtcgggaaccg 49
||||||||||||||||||||||||||||||||||
Sbjct: 1 ggtctctaattcgcttggtgcaggtcgggaaccg 34
Score = 56.0 bits (28), Expect = 8e-09
Identities = 28/28 (100%)
Strand = Plus / Plus
Query: 118 gatcccgccttgcatcaactgaatcgga 145
||||||||||||||||||||||||||||
Sbjct: 99 gatcccgccttgcatcaactgaatcgga 126
>54388_rco-miR168:pmrd
Length = 156
Score = 67.9 bits (34), Expect = 2e-12
Identities = 34/34 (100%)
Strand = Plus / Plus
Query: 14 gcggtctctaattcgcttggtgcaggtcgggaac 47
||||||||||||||||||||||||||||||||||
Sbjct: 7 gcggtctctaattcgcttggtgcaggtcgggaac 40
Score = 54.0 bits (27), Expect = 3e-08
Identities = 27/27 (100%)
Strand = Plus / Plus
Query: 117 ggatcccgccttgcatcaactgaatcg 143
|||||||||||||||||||||||||||
Sbjct: 115 ggatcccgccttgcatcaactgaatcg 141
>51651_ptc-miR168b:pmrd
Length = 136
Score = 63.9 bits (32), Expect = 3e-11
Identities = 32/32 (100%)
Strand = Plus / Plus
Query: 16 ggtctctaattcgcttggtgcaggtcgggaac 47
||||||||||||||||||||||||||||||||
Sbjct: 1 ggtctctaattcgcttggtgcaggtcgggaac 32
Score = 58.0 bits (29), Expect = 2e-09
Identities = 29/29 (100%)
Strand = Plus / Plus
Query: 117 ggatcccgccttgcatcaactgaatcgga 145
|||||||||||||||||||||||||||||
Sbjct: 106 ggatcccgccttgcatcaactgaatcgga 134
>47339_ath-miRf10239-akr:pmrd
Length = 129
Score = 60.0 bits (30), Expect = 5e-10
Identities = 33/34 (97%)
Strand = Plus / Plus
Query: 112 ggatcggatcccgccttgcatcaactgaatcgga 145
|||| |||||||||||||||||||||||||||||
Sbjct: 89 ggattggatcccgccttgcatcaactgaatcgga 122
Score = 50.1 bits (25), Expect = 5e-07
Identities = 25/25 (100%)
Strand = Plus / Plus
Query: 24 attcgcttggtgcaggtcgggaacc 48
|||||||||||||||||||||||||
Sbjct: 11 attcgcttggtgcaggtcgggaacc 35
>46957_ath-miR168a:pmrd
Length = 138
Score = 60.0 bits (30), Expect = 5e-10
Identities = 33/34 (97%)
Strand = Plus / Plus
Query: 112 ggatcggatcccgccttgcatcaactgaatcgga 145
|||| |||||||||||||||||||||||||||||
Sbjct: 94 ggattggatcccgccttgcatcaactgaatcgga 127
Score = 50.1 bits (25), Expect = 5e-07
Identities = 25/25 (100%)
Strand = Plus / Plus
Query: 24 attcgcttggtgcaggtcgggaacc 48
|||||||||||||||||||||||||
Sbjct: 16 attcgcttggtgcaggtcgggaacc 40
>51650_ptc-miR168a:pmrd
Length = 160
Score = 58.0 bits (29), Expect = 2e-09
Identities = 29/29 (100%)
Strand = Plus / Plus
Query: 117 ggatcccgccttgcatcaactgaatcgga 145
|||||||||||||||||||||||||||||
Sbjct: 130 ggatcccgccttgcatcaactgaatcgga 158
Score = 56.0 bits (28), Expect = 8e-09
Identities = 31/32 (96%)
Strand = Plus / Plus
Query: 16 ggtctctaattcgcttggtgcaggtcgggaac 47
||||||| ||||||||||||||||||||||||
Sbjct: 1 ggtctctgattcgcttggtgcaggtcgggaac 32
>55000_zma-miR168b:pmrd
Length = 104
Score = 52.0 bits (26), Expect = 1e-07
Identities = 29/30 (96%)
Strand = Plus / Plus
Query: 116 cggatcccgccttgcatcaactgaatcgga 145
|||||||||||||||||||| |||||||||
Sbjct: 62 cggatcccgccttgcatcaagtgaatcgga 91
>46958_ath-miR168b:pmrd
Length = 124
Score = 52.0 bits (26), Expect = 1e-07
Identities = 32/34 (94%)
Strand = Plus / Plus
Query: 14 gcggtctctaattcgcttggtgcaggtcgggaac 47
|||||||| ||||||||||||||||||||||||
Sbjct: 7 gcggtctcggattcgcttggtgcaggtcgggaac 40
>46959_ath-miR168m:pmrd
Length = 104
Score = 48.1 bits (24), Expect = 2e-06
Identities = 27/28 (96%)
Strand = Plus / Plus
Query: 112 ggatcggatcccgccttgcatcaactga 139
|||| |||||||||||||||||||||||
Sbjct: 77 ggattggatcccgccttgcatcaactga 104
Score = 46.1 bits (23), Expect = 8e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 26 tcgcttggtgcaggtcgggaacc 48
|||||||||||||||||||||||
Sbjct: 1 tcgcttggtgcaggtcgggaacc 23
>54375_pts-miR168b:pmrd
Length = 140
Score = 46.1 bits (23), Expect = 8e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 117 ggatcccgccttgcatcaactga 139
|||||||||||||||||||||||
Sbjct: 118 ggatcccgccttgcatcaactga 140
Score = 44.1 bits (22), Expect = 3e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 26 tcgcttggtgcaggtcgggaac 47
||||||||||||||||||||||
Sbjct: 1 tcgcttggtgcaggtcgggaac 22
>54374_pts-miR168a:pmrd
Length = 118
Score = 46.1 bits (23), Expect = 8e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 117 ggatcccgccttgcatcaactga 139
|||||||||||||||||||||||
Sbjct: 96 ggatcccgccttgcatcaactga 118
Score = 44.1 bits (22), Expect = 3e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 26 tcgcttggtgcaggtcgggaac 47
||||||||||||||||||||||
Sbjct: 1 tcgcttggtgcaggtcgggaac 22
>54366_ptr-miR168:pmrd
Length = 118
Score = 46.1 bits (23), Expect = 8e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 117 ggatcccgccttgcatcaactga 139
|||||||||||||||||||||||
Sbjct: 96 ggatcccgccttgcatcaactga 118
Score = 44.1 bits (22), Expect = 3e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 26 tcgcttggtgcaggtcgggaac 47
||||||||||||||||||||||
Sbjct: 1 tcgcttggtgcaggtcgggaac 22
>48349_bna-miR168:pmrd
Length = 133
Score = 46.1 bits (23), Expect = 8e-06
Identities = 29/31 (93%)
Strand = Plus / Plus
Query: 112 ggatcggatcccgccttgcatcaactgaatc 142
|||||||||||||||||| ||||| ||||||
Sbjct: 89 ggatcggatcccgccttgtatcaagtgaatc 119
Score = 44.1 bits (22), Expect = 3e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 26 tcgcttggtgcaggtcgggaac 47
||||||||||||||||||||||
Sbjct: 18 tcgcttggtgcaggtcgggaac 39
>54999_zma-miR168a:pmrd
Length = 104
Score = 44.1 bits (22), Expect = 3e-05
Identities = 28/30 (93%)
Strand = Plus / Plus
Query: 116 cggatcccgccttgcatcaactgaatcgga 145
|||||||||||||||| ||| |||||||||
Sbjct: 62 cggatcccgccttgcaccaagtgaatcgga 91
>54637_sof-miR168b:pmrd
Length = 103
Score = 44.1 bits (22), Expect = 3e-05
Identities = 28/30 (93%)
Strand = Plus / Plus
Query: 116 cggatcccgccttgcatcaactgaatcgga 145
|||||||||||||||| ||| |||||||||
Sbjct: 61 cggatcccgccttgcaccaagtgaatcgga 90
>54636_sof-miR168a:pmrd
Length = 104
Score = 44.1 bits (22), Expect = 3e-05
Identities = 28/30 (93%)
Strand = Plus / Plus
Query: 116 cggatcccgccttgcatcaactgaatcgga 145
|||||||||||||||| ||| |||||||||
Sbjct: 62 cggatcccgccttgcaccaagtgaatcgga 91
>48873_osa-miR168a:pmrd
Length = 87
Score = 44.1 bits (22), Expect = 3e-05
Identities = 28/30 (93%)
Strand = Plus / Plus
Query: 116 cggatcccgccttgcatcaactgaatcgga 145
|||||||||||||||| ||| |||||||||
Sbjct: 54 cggatcccgccttgcaccaagtgaatcgga 83
>48872_osa-miR168a:pmrd
Length = 87
Score = 44.1 bits (22), Expect = 3e-05
Identities = 28/30 (93%)
Strand = Plus / Plus
Query: 116 cggatcccgccttgcatcaactgaatcgga 145
|||||||||||||||| ||| |||||||||
Sbjct: 54 cggatcccgccttgcaccaagtgaatcgga 83
>48871_osa-miR168a:pmrd
Length = 87
Score = 44.1 bits (22), Expect = 3e-05
Identities = 28/30 (93%)
Strand = Plus / Plus
Query: 116 cggatcccgccttgcatcaactgaatcgga 145
|||||||||||||||| ||| |||||||||
Sbjct: 54 cggatcccgccttgcaccaagtgaatcgga 83
>48649_hte-miR168:pmrd
Length = 140
Score = 44.1 bits (22), Expect = 3e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 26 tcgcttggtgcaggtcgggaac 47
||||||||||||||||||||||
Sbjct: 1 tcgcttggtgcaggtcgggaac 22
>54665_stu-miR168:pmrd
Length = 133
Score = 40.1 bits (20), Expect = 5e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 26 tcgcttggtgcaggtcggga 45
||||||||||||||||||||
Sbjct: 1 tcgcttggtgcaggtcggga 20
Score = 40.1 bits (20), Expect = 5e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 120 tcccgccttgcatcaactga 139
||||||||||||||||||||
Sbjct: 114 tcccgccttgcatcaactga 133
>54546_sly-miR168:pmrd
Length = 145
Score = 40.1 bits (20), Expect = 5e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 26 tcgcttggtgcaggtcggga 45
||||||||||||||||||||
Sbjct: 1 tcgcttggtgcaggtcggga 20
