miRNEST 2.0, an integrative microRNA resource :: BLAST
>46096_miR162:micropc
Length = 87
Score = 157 bits (79), Expect = 3e-39
Identities = 85/87 (97%)
Strand = Plus / Minus
Query: 29 ctggatgcagaggtttatcgaccgattcttgttttgtgttcttccacagccaaattcagg 88
||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||
Sbjct: 87 ctggatgcagaggtttatcgaccgattcttgctttgtgttcttccacagccaaattcagg 28
Query: 89 aagagatcgatgaaccgctgcgtccag 115
||||||||||||||||||||| |||||
Sbjct: 27 aagagatcgatgaaccgctgcctccag 1
>44920_miR162:micropc
Length = 85
Score = 153 bits (77), Expect = 4e-38
Identities = 83/85 (97%)
Strand = Plus / Minus
Query: 30 tggatgcagaggtttatcgaccgattcttgttttgtgttcttccacagccaaattcagga 89
|||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||
Sbjct: 85 tggatgcagaggtttatcgaccgattcttgctttgtgttcttccacagccaaattcagga 26
Query: 90 agagatcgatgaaccgctgcgtcca 114
|||||||||||||||||||| ||||
Sbjct: 25 agagatcgatgaaccgctgcctcca 1
>45545_miR162:micropc
Length = 91
Score = 79.8 bits (40), Expect = 5e-16
Identities = 81/91 (89%), Gaps = 4/91 (4%)
Strand = Plus / Minus
Query: 29 ctggatgcagaggtttatcgaccgattcttgt-tttgtgttcttc-cacagccaaattc- 85
||||||||||||||||||||| |||||| ||| |||||||| ||| |||| | ||||||
Sbjct: 91 ctggatgcagaggtttatcgatcgattcatgtatttgtgttattctcacaacaaaattct 32
Query: 86 -aggaagagatcgatgaaccgctgcgtccag 115
|||||||||||||||||||||||| |||||
Sbjct: 31 caggaagagatcgatgaaccgctgcctccag 1
>44984_miR162:micropc
Length = 85
Score = 77.8 bits (39), Expect = 2e-15
Identities = 77/87 (88%), Gaps = 2/87 (2%)
Strand = Plus / Minus
Query: 29 ctggatgcagaggtttatcgaccgattcttgttttgtgttcttccacagccaaattcagg 88
||||||||||||||||||||||||||||||| | || || || |||| ||| ||||||
Sbjct: 85 ctggatgcagaggtttatcgaccgattcttgatctg-cttttttcaca-acaatttcagg 28
Query: 89 aagagatcgatgaaccgctgcgtccag 115
||||||||||||||||||||| |||||
Sbjct: 27 aagagatcgatgaaccgctgcatccag 1
>46511_miR162:micropc
Length = 89
Score = 75.8 bits (38), Expect = 8e-15
Identities = 79/89 (88%), Gaps = 4/89 (4%)
Strand = Plus / Minus
Query: 30 tggatgcagaggtttatcgaccgattcttgt-tttgtgttcttc-cacagccaaattc-- 85
|||||||||||||||||||| |||||| ||| |||||||| ||| |||| | ||||||
Sbjct: 89 tggatgcagaggtttatcgatcgattcatgtatttgtgttattctcacaacaaaattctc 30
Query: 86 aggaagagatcgatgaaccgctgcgtcca 114
|||||||||||||||||||||||| ||||
Sbjct: 29 aggaagagatcgatgaaccgctgcctcca 1
>46792_miR162:micropc
Length = 83
Score = 73.8 bits (37), Expect = 3e-14
Identities = 75/85 (88%), Gaps = 2/85 (2%)
Strand = Plus / Minus
Query: 30 tggatgcagaggtttatcgaccgattcttgttttgtgttcttccacagccaaattcagga 89
|||||||||||||||||||||||||||||| | || || || |||| ||| |||||||
Sbjct: 83 tggatgcagaggtttatcgaccgattcttgatctg-cttttttcaca-acaatttcagga 26
Query: 90 agagatcgatgaaccgctgcgtcca 114
|||||||||||||||||||| ||||
Sbjct: 25 agagatcgatgaaccgctgcatcca 1
>46026_miR162:micropc
Length = 87
Score = 60.0 bits (30), Expect = 5e-10
Identities = 33/34 (97%)
Strand = Plus / Minus
Query: 29 ctggatgcagaggtttatcgaccgattcttgttt 62
|||||||||||||||||||||||||||| |||||
Sbjct: 87 ctggatgcagaggtttatcgaccgattcatgttt 54
Score = 56.0 bits (28), Expect = 7e-09
Identities = 34/36 (94%)
Strand = Plus / Minus
Query: 80 aaattcaggaagagatcgatgaaccgctgcgtccag 115
||||||||||| |||||||||||||||||| |||||
Sbjct: 36 aaattcaggaacagatcgatgaaccgctgcatccag 1
>46557_miR162:micropc
Length = 85
Score = 58.0 bits (29), Expect = 2e-09
Identities = 32/33 (96%)
Strand = Plus / Minus
Query: 30 tggatgcagaggtttatcgaccgattcttgttt 62
||||||||||||||||||||||||||| |||||
Sbjct: 85 tggatgcagaggtttatcgaccgattcatgttt 53
Score = 54.0 bits (27), Expect = 3e-08
Identities = 33/35 (94%)
Strand = Plus / Minus
Query: 80 aaattcaggaagagatcgatgaaccgctgcgtcca 114
||||||||||| |||||||||||||||||| ||||
Sbjct: 35 aaattcaggaacagatcgatgaaccgctgcatcca 1
>46628_miR162:micropc
Length = 136
Score = 56.0 bits (28), Expect = 7e-09
Identities = 28/28 (100%)
Strand = Plus / Minus
Query: 29 ctggatgcagaggtttatcgaccgattc 56
||||||||||||||||||||||||||||
Sbjct: 136 ctggatgcagaggtttatcgaccgattc 109
Score = 42.1 bits (21), Expect = 1e-04
Identities = 27/29 (93%)
Strand = Plus / Minus
Query: 87 ggaagagatcgatgaaccgctgcgtccag 115
|||| |||||||||||||||||| |||||
Sbjct: 29 ggaacagatcgatgaaccgctgcatccag 1
>46169_miR162:micropc
Length = 136
Score = 56.0 bits (28), Expect = 7e-09
Identities = 28/28 (100%)
Strand = Plus / Minus
Query: 29 ctggatgcagaggtttatcgaccgattc 56
||||||||||||||||||||||||||||
Sbjct: 136 ctggatgcagaggtttatcgaccgattc 109
Score = 42.1 bits (21), Expect = 1e-04
Identities = 27/29 (93%)
Strand = Plus / Minus
Query: 87 ggaagagatcgatgaaccgctgcgtccag 115
|||| |||||||||||||||||| |||||
Sbjct: 29 ggaacagatcgatgaaccgctgcatccag 1
>45617_miR162:micropc
Length = 88
Score = 56.0 bits (28), Expect = 7e-09
Identities = 28/28 (100%)
Strand = Plus / Minus
Query: 29 ctggatgcagaggtttatcgaccgattc 56
||||||||||||||||||||||||||||
Sbjct: 88 ctggatgcagaggtttatcgaccgattc 61
>45084_miR162:micropc
Length = 136
Score = 56.0 bits (28), Expect = 7e-09
Identities = 28/28 (100%)
Strand = Plus / Minus
Query: 29 ctggatgcagaggtttatcgaccgattc 56
||||||||||||||||||||||||||||
Sbjct: 136 ctggatgcagaggtttatcgaccgattc 109
Score = 42.1 bits (21), Expect = 1e-04
Identities = 27/29 (93%)
Strand = Plus / Minus
Query: 87 ggaagagatcgatgaaccgctgcgtccag 115
|||| |||||||||||||||||| |||||
Sbjct: 29 ggaacagatcgatgaaccgctgcatccag 1
>44890_miR162:micropc
Length = 141
Score = 56.0 bits (28), Expect = 7e-09
Identities = 28/28 (100%)
Strand = Plus / Minus
Query: 29 ctggatgcagaggtttatcgaccgattc 56
||||||||||||||||||||||||||||
Sbjct: 141 ctggatgcagaggtttatcgaccgattc 114
Score = 42.1 bits (21), Expect = 1e-04
Identities = 27/29 (93%)
Strand = Plus / Minus
Query: 87 ggaagagatcgatgaaccgctgcgtccag 115
|||| |||||||||||||||||| |||||
Sbjct: 29 ggaacagatcgatgaaccgctgcatccag 1
>44807_miR162:micropc
Length = 141
Score = 56.0 bits (28), Expect = 7e-09
Identities = 28/28 (100%)
Strand = Plus / Minus
Query: 29 ctggatgcagaggtttatcgaccgattc 56
||||||||||||||||||||||||||||
Sbjct: 141 ctggatgcagaggtttatcgaccgattc 114
Score = 42.1 bits (21), Expect = 1e-04
Identities = 27/29 (93%)
Strand = Plus / Minus
Query: 87 ggaagagatcgatgaaccgctgcgtccag 115
|||| |||||||||||||||||| |||||
Sbjct: 29 ggaacagatcgatgaaccgctgcatccag 1
>46549_miR162:micropc
Length = 92
Score = 54.0 bits (27), Expect = 3e-08
Identities = 30/31 (96%)
Strand = Plus / Minus
Query: 85 caggaagagatcgatgaaccgctgcgtccag 115
||||||||||||||||||||||||| |||||
Sbjct: 31 caggaagagatcgatgaaccgctgcctccag 1
Score = 48.1 bits (24), Expect = 2e-06
Identities = 27/28 (96%)
Strand = Plus / Minus
Query: 29 ctggatgcagaggtttatcgaccgattc 56
||||||||||||||||||||| ||||||
Sbjct: 92 ctggatgcagaggtttatcgatcgattc 65
>46470_miR162:micropc
Length = 135
Score = 54.0 bits (27), Expect = 3e-08
Identities = 27/27 (100%)
Strand = Plus / Minus
Query: 30 tggatgcagaggtttatcgaccgattc 56
|||||||||||||||||||||||||||
Sbjct: 135 tggatgcagaggtttatcgaccgattc 109
Score = 40.1 bits (20), Expect = 4e-04
Identities = 26/28 (92%)
Strand = Plus / Minus
Query: 87 ggaagagatcgatgaaccgctgcgtcca 114
|||| |||||||||||||||||| ||||
Sbjct: 28 ggaacagatcgatgaaccgctgcatcca 1
>46039_miR162:micropc
Length = 92
Score = 54.0 bits (27), Expect = 3e-08
Identities = 30/31 (96%)
Strand = Plus / Minus
Query: 85 caggaagagatcgatgaaccgctgcgtccag 115
||||||||||||||||||||||||| |||||
Sbjct: 31 caggaagagatcgatgaaccgctgcctccag 1
>45921_miR162:micropc
Length = 110
Score = 54.0 bits (27), Expect = 3e-08
Identities = 30/31 (96%)
Strand = Plus / Minus
Query: 85 caggaagagatcgatgaaccgctgcgtccag 115
||||||||||||||||||||||||| |||||
Sbjct: 31 caggaagagatcgatgaaccgctgcctccag 1
Score = 42.1 bits (21), Expect = 1e-04
Identities = 21/21 (100%)
Strand = Plus / Minus
Query: 29 ctggatgcagaggtttatcga 49
|||||||||||||||||||||
Sbjct: 110 ctggatgcagaggtttatcga 90
>45868_miR162:micropc
Length = 135
Score = 54.0 bits (27), Expect = 3e-08
Identities = 27/27 (100%)
Strand = Plus / Minus
Query: 30 tggatgcagaggtttatcgaccgattc 56
|||||||||||||||||||||||||||
Sbjct: 135 tggatgcagaggtttatcgaccgattc 109
Score = 40.1 bits (20), Expect = 4e-04
Identities = 26/28 (92%)
Strand = Plus / Minus
Query: 87 ggaagagatcgatgaaccgctgcgtcca 114
|||| |||||||||||||||||| ||||
Sbjct: 28 ggaacagatcgatgaaccgctgcatcca 1
>45757_miR162:micropc
Length = 86
Score = 54.0 bits (27), Expect = 3e-08
Identities = 27/27 (100%)
Strand = Plus / Minus
Query: 30 tggatgcagaggtttatcgaccgattc 56
|||||||||||||||||||||||||||
Sbjct: 86 tggatgcagaggtttatcgaccgattc 60
>45605_miR162:micropc
Length = 135
Score = 54.0 bits (27), Expect = 3e-08
Identities = 27/27 (100%)
Strand = Plus / Minus
Query: 30 tggatgcagaggtttatcgaccgattc 56
|||||||||||||||||||||||||||
Sbjct: 135 tggatgcagaggtttatcgaccgattc 109
Score = 40.1 bits (20), Expect = 4e-04
Identities = 26/28 (92%)
Strand = Plus / Minus
Query: 87 ggaagagatcgatgaaccgctgcgtcca 114
|||| |||||||||||||||||| ||||
Sbjct: 28 ggaacagatcgatgaaccgctgcatcca 1
>45416_miR162:micropc
Length = 139
Score = 54.0 bits (27), Expect = 3e-08
Identities = 27/27 (100%)
Strand = Plus / Minus
Query: 30 tggatgcagaggtttatcgaccgattc 56
|||||||||||||||||||||||||||
Sbjct: 139 tggatgcagaggtttatcgaccgattc 113
Score = 40.1 bits (20), Expect = 4e-04
Identities = 26/28 (92%)
Strand = Plus / Minus
Query: 87 ggaagagatcgatgaaccgctgcgtcca 114
|||| |||||||||||||||||| ||||
Sbjct: 28 ggaacagatcgatgaaccgctgcatcca 1
>45197_miR162:micropc
Length = 139
Score = 54.0 bits (27), Expect = 3e-08
Identities = 27/27 (100%)
Strand = Plus / Minus
Query: 30 tggatgcagaggtttatcgaccgattc 56
|||||||||||||||||||||||||||
Sbjct: 139 tggatgcagaggtttatcgaccgattc 113
Score = 40.1 bits (20), Expect = 4e-04
Identities = 26/28 (92%)
Strand = Plus / Minus
Query: 87 ggaagagatcgatgaaccgctgcgtcca 114
|||| |||||||||||||||||| ||||
Sbjct: 28 ggaacagatcgatgaaccgctgcatcca 1
>46504_miR162:micropc
Length = 90
Score = 52.0 bits (26), Expect = 1e-07
Identities = 29/30 (96%)
Strand = Plus / Minus
Query: 85 caggaagagatcgatgaaccgctgcgtcca 114
||||||||||||||||||||||||| ||||
Sbjct: 30 caggaagagatcgatgaaccgctgcctcca 1
>45903_miR162:micropc
Length = 90
Score = 52.0 bits (26), Expect = 1e-07
Identities = 29/30 (96%)
Strand = Plus / Minus
Query: 85 caggaagagatcgatgaaccgctgcgtcca 114
||||||||||||||||||||||||| ||||
Sbjct: 30 caggaagagatcgatgaaccgctgcctcca 1
Score = 46.1 bits (23), Expect = 7e-06
Identities = 26/27 (96%)
Strand = Plus / Minus
Query: 30 tggatgcagaggtttatcgaccgattc 56
|||||||||||||||||||| ||||||
Sbjct: 90 tggatgcagaggtttatcgatcgattc 64
>45508_miR162:micropc
Length = 108
Score = 52.0 bits (26), Expect = 1e-07
Identities = 29/30 (96%)
Strand = Plus / Minus
Query: 85 caggaagagatcgatgaaccgctgcgtcca 114
||||||||||||||||||||||||| ||||
Sbjct: 30 caggaagagatcgatgaaccgctgcctcca 1
Score = 40.1 bits (20), Expect = 4e-04
Identities = 20/20 (100%)
Strand = Plus / Minus
Query: 30 tggatgcagaggtttatcga 49
||||||||||||||||||||
Sbjct: 108 tggatgcagaggtttatcga 89
>46456_miR162:micropc
Length = 89
Score = 50.1 bits (25), Expect = 5e-07
Identities = 25/25 (100%)
Strand = Plus / Minus
Query: 85 caggaagagatcgatgaaccgctgc 109
|||||||||||||||||||||||||
Sbjct: 32 caggaagagatcgatgaaccgctgc 8
Score = 46.1 bits (23), Expect = 7e-06
Identities = 32/35 (91%)
Strand = Plus / Minus
Query: 29 ctggatgcagaggtttatcgaccgattcttgtttt 63
||||||||||||||||||||| || ||| ||||||
Sbjct: 89 ctggatgcagaggtttatcgatcggttcatgtttt 55
>45283_miR162:micropc
Length = 87
Score = 50.1 bits (25), Expect = 5e-07
Identities = 25/25 (100%)
Strand = Plus / Minus
Query: 85 caggaagagatcgatgaaccgctgc 109
|||||||||||||||||||||||||
Sbjct: 31 caggaagagatcgatgaaccgctgc 7
Score = 44.1 bits (22), Expect = 3e-05
Identities = 31/34 (91%)
Strand = Plus / Minus
Query: 30 tggatgcagaggtttatcgaccgattcttgtttt 63
|||||||||||||||||||| || ||| ||||||
Sbjct: 87 tggatgcagaggtttatcgatcggttcatgtttt 54
>46817_miR162:micropc
Length = 93
Score = 48.1 bits (24), Expect = 2e-06
Identities = 27/28 (96%)
Strand = Plus / Minus
Query: 29 ctggatgcagaggtttatcgaccgattc 56
||||||||||||||||||||| ||||||
Sbjct: 93 ctggatgcagaggtttatcgatcgattc 66
>46676_miR162:micropc
Length = 97
Score = 48.1 bits (24), Expect = 2e-06
Identities = 27/28 (96%)
Strand = Plus / Minus
Query: 29 ctggatgcagaggtttatcgaccgattc 56
||||||||||||||||||||| ||||||
Sbjct: 97 ctggatgcagaggtttatcgatcgattc 70
>45991_miR162:micropc
Length = 108
Score = 48.1 bits (24), Expect = 2e-06
Identities = 27/28 (96%)
Strand = Plus / Minus
Query: 29 ctggatgcagaggtttatcgaccgattc 56
||||||||||||||||||||| ||||||
Sbjct: 108 ctggatgcagaggtttatcgatcgattc 81
>45901_miR162:micropc
Length = 111
Score = 48.1 bits (24), Expect = 2e-06
Identities = 27/28 (96%)
Strand = Plus / Minus
Query: 29 ctggatgcagaggtttatcgaccgattc 56
||||||||||||||||||||| ||||||
Sbjct: 111 ctggatgcagaggtttatcgatcgattc 84
>45749_miR162:micropc
Length = 99
Score = 48.1 bits (24), Expect = 2e-06
Identities = 27/28 (96%)
Strand = Plus / Minus
Query: 29 ctggatgcagaggtttatcgaccgattc 56
||||||||||||||||||||| ||||||
Sbjct: 99 ctggatgcagaggtttatcgatcgattc 72
>44934_miR162:micropc
Length = 97
Score = 48.1 bits (24), Expect = 2e-06
Identities = 27/28 (96%)
Strand = Plus / Minus
Query: 29 ctggatgcagaggtttatcgaccgattc 56
||||||||||||||||||||| ||||||
Sbjct: 97 ctggatgcagaggtttatcgatcgattc 70
>46597_miR162:micropc
Length = 91
Score = 46.1 bits (23), Expect = 7e-06
Identities = 26/27 (96%)
Strand = Plus / Minus
Query: 30 tggatgcagaggtttatcgaccgattc 56
|||||||||||||||||||| ||||||
Sbjct: 91 tggatgcagaggtttatcgatcgattc 65
>46457_miR162:micropc
Length = 109
Score = 46.1 bits (23), Expect = 7e-06
Identities = 26/27 (96%)
Strand = Plus / Minus
Query: 30 tggatgcagaggtttatcgaccgattc 56
|||||||||||||||||||| ||||||
Sbjct: 109 tggatgcagaggtttatcgatcgattc 83
>46394_miR162:micropc
Length = 95
Score = 46.1 bits (23), Expect = 7e-06
Identities = 26/27 (96%)
Strand = Plus / Minus
Query: 30 tggatgcagaggtttatcgaccgattc 56
|||||||||||||||||||| ||||||
Sbjct: 95 tggatgcagaggtttatcgatcgattc 69
>46364_miR162:micropc
Length = 95
Score = 46.1 bits (23), Expect = 7e-06
Identities = 26/27 (96%)
Strand = Plus / Minus
Query: 30 tggatgcagaggtttatcgaccgattc 56
|||||||||||||||||||| ||||||
Sbjct: 95 tggatgcagaggtttatcgatcgattc 69
>46090_miR162:micropc
Length = 97
Score = 46.1 bits (23), Expect = 7e-06
Identities = 26/27 (96%)
Strand = Plus / Minus
Query: 30 tggatgcagaggtttatcgaccgattc 56
|||||||||||||||||||| ||||||
Sbjct: 97 tggatgcagaggtttatcgatcgattc 71
>44845_miR162:micropc
Length = 106
Score = 46.1 bits (23), Expect = 7e-06
Identities = 26/27 (96%)
Strand = Plus / Minus
Query: 30 tggatgcagaggtttatcgaccgattc 56
|||||||||||||||||||| ||||||
Sbjct: 106 tggatgcagaggtttatcgatcgattc 80
>45279_miR162:micropc
Length = 114
Score = 40.1 bits (20), Expect = 4e-04
Identities = 26/28 (92%)
Strand = Plus / Minus
Query: 29 ctggatgcagaggtttatcgaccgattc 56
||||||||||||| ||||||| ||||||
Sbjct: 114 ctggatgcagaggcttatcgatcgattc 87
