miRNEST 2.0: an integrative microRNA resource miRNEST 2.0, an integrative microRNA resource :: BLAST


>41144_tcc-MIR398a:mirbase
          Length = 125

 Score = 52.0 bits (26), Expect = 6e-08
 Identities = 26/26 (100%)
 Strand = Plus / Plus

                                     
Query: 49  ttgatgtgttctcaggtcgcccctgc 74
           ||||||||||||||||||||||||||
Sbjct: 81  ttgatgtgttctcaggtcgcccctgc 106




>41446_ptc-MIR398b:mirbase
          Length = 85

 Score = 48.1 bits (24), Expect = 1e-06
 Identities = 27/28 (96%)
 Strand = Plus / Plus

                                      
Query: 47 acttgatgtgttctcaggtcgcccctgc 74
          |||| |||||||||||||||||||||||
Sbjct: 50 acttcatgtgttctcaggtcgcccctgc 77




>41667_vvi-MIR398c:mirbase
          Length = 88

 Score = 46.1 bits (23), Expect = 4e-06
 Identities = 23/23 (100%)
 Strand = Plus / Plus

                                 
Query: 52 atgtgttctcaggtcgcccctgc 74
          |||||||||||||||||||||||
Sbjct: 57 atgtgttctcaggtcgcccctgc 79




>41666_vvi-MIR398b:mirbase
          Length = 88

 Score = 46.1 bits (23), Expect = 4e-06
 Identities = 23/23 (100%)
 Strand = Plus / Plus

                                 
Query: 52 atgtgttctcaggtcgcccctgc 74
          |||||||||||||||||||||||
Sbjct: 57 atgtgttctcaggtcgcccctgc 79




>41447_ptc-MIR398c:mirbase
          Length = 97

 Score = 46.1 bits (23), Expect = 4e-06
 Identities = 23/23 (100%)
 Strand = Plus / Plus

                                 
Query: 52 atgtgttctcaggtcgcccctgc 74
          |||||||||||||||||||||||
Sbjct: 67 atgtgttctcaggtcgcccctgc 89




>41191_aqc-MIR398b:mirbase
          Length = 93

 Score = 46.1 bits (23), Expect = 4e-06
 Identities = 23/23 (100%)
 Strand = Plus / Plus

                                 
Query: 52 atgtgttctcaggtcgcccctgc 74
          |||||||||||||||||||||||
Sbjct: 71 atgtgttctcaggtcgcccctgc 93




>40729_mtr-MIR398b:mirbase
          Length = 87

 Score = 46.1 bits (23), Expect = 4e-06
 Identities = 23/23 (100%)
 Strand = Plus / Plus

                                 
Query: 52 atgtgttctcaggtcgcccctgc 74
          |||||||||||||||||||||||
Sbjct: 61 atgtgttctcaggtcgcccctgc 83




>40382_rco-MIR398b:mirbase
          Length = 126

 Score = 46.1 bits (23), Expect = 4e-06
 Identities = 23/23 (100%)
 Strand = Plus / Plus

                                  
Query: 52  atgtgttctcaggtcgcccctgc 74
           |||||||||||||||||||||||
Sbjct: 100 atgtgttctcaggtcgcccctgc 122




>42040_osa-MIR398b:mirbase
          Length = 88

 Score = 44.1 bits (22), Expect = 1e-05
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                
Query: 53 tgtgttctcaggtcgcccctgc 74
          ||||||||||||||||||||||
Sbjct: 58 tgtgttctcaggtcgcccctgc 79




>41801_bdi-MIR398c:mirbase
          Length = 131

 Score = 44.1 bits (22), Expect = 1e-05
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                 
Query: 52  atgtgttctcaggtcgcccctg 73
           ||||||||||||||||||||||
Sbjct: 86  atgtgttctcaggtcgcccctg 107




>41799_bdi-MIR398a:mirbase
          Length = 150

 Score = 44.1 bits (22), Expect = 1e-05
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                 
Query: 52  atgtgttctcaggtcgcccctg 73
           ||||||||||||||||||||||
Sbjct: 95  atgtgttctcaggtcgcccctg 116




>40730_mtr-MIR398c:mirbase
          Length = 87

 Score = 44.1 bits (22), Expect = 1e-05
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                
Query: 53 tgtgttctcaggtcgcccctgc 74
          ||||||||||||||||||||||
Sbjct: 62 tgtgttctcaggtcgcccctgc 83




>42818_zma-MIR398b:mirbase
          Length = 108

 Score = 40.1 bits (20), Expect = 2e-04
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 52  atgtgttctcaggtcgcccc 71
           ||||||||||||||||||||
Sbjct: 86  atgtgttctcaggtcgcccc 105




>42817_zma-MIR398a:mirbase
          Length = 140

 Score = 40.1 bits (20), Expect = 2e-04
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 52  atgtgttctcaggtcgcccc 71
           ||||||||||||||||||||
Sbjct: 118 atgtgttctcaggtcgcccc 137




>42645_tae-MIR398:mirbase
          Length = 120

 Score = 40.1 bits (20), Expect = 2e-04
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 52  atgtgttctcaggtcgcccc 71
           ||||||||||||||||||||
Sbjct: 84  atgtgttctcaggtcgcccc 103




>42588_sbi-MIR398:mirbase
          Length = 109

 Score = 40.1 bits (20), Expect = 2e-04
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 52  atgtgttctcaggtcgcccc 71
           ||||||||||||||||||||
Sbjct: 87  atgtgttctcaggtcgcccc 106




>40091_ath-MIR398c:mirbase
          Length = 115

 Score = 38.2 bits (19), Expect = 0.001
 Identities = 22/23 (95%)
 Strand = Plus / Plus

                                  
Query: 52  atgtgttctcaggtcgcccctgc 74
           ||||||||||||||| |||||||
Sbjct: 84  atgtgttctcaggtcacccctgc 106




>40090_ath-MIR398b:mirbase
          Length = 116

 Score = 38.2 bits (19), Expect = 0.001
 Identities = 22/23 (95%)
 Strand = Plus / Plus

                                  
Query: 52  atgtgttctcaggtcgcccctgc 74
           ||||||||||||||| |||||||
Sbjct: 85  atgtgttctcaggtcacccctgc 107




>39882_aly-MIR398b:mirbase
          Length = 142

 Score = 38.2 bits (19), Expect = 0.001
 Identities = 22/23 (95%)
 Strand = Plus / Plus

                                  
Query: 52  atgtgttctcaggtcgcccctgc 74
           ||||||||||||||| |||||||
Sbjct: 90  atgtgttctcaggtcacccctgc 112