miRNEST 2.0, an integrative microRNA resource :: BLAST
>41578_vvi-MIR162:mirbase
Length = 103
Score = 79.8 bits (40), Expect = 4e-16
Identities = 43/44 (97%)
Strand = Plus / Plus
Query: 12 tgaagtcactggaggcagcggttcatcgatctcttcctgaaatt 55
||||||||||||| ||||||||||||||||||||||||||||||
Sbjct: 1 tgaagtcactggatgcagcggttcatcgatctcttcctgaaatt 44
>40437_gma-MIR162:mirbase
Length = 102
Score = 75.8 bits (38), Expect = 7e-15
Identities = 41/42 (97%)
Strand = Plus / Plus
Query: 11 gtgaagtcactggaggcagcggttcatcgatctcttcctgaa 52
|||||||||||||| |||||||||||||||||||||||||||
Sbjct: 1 gtgaagtcactggatgcagcggttcatcgatctcttcctgaa 42
Score = 50.1 bits (25), Expect = 4e-07
Identities = 25/25 (100%)
Strand = Plus / Plus
Query: 90 cgataaacctctgcatccagcgctc 114
|||||||||||||||||||||||||
Sbjct: 74 cgataaacctctgcatccagcgctc 98
>40329_cpa-MIR162a:mirbase
Length = 109
Score = 73.8 bits (37), Expect = 3e-14
Identities = 37/37 (100%)
Strand = Plus / Plus
Query: 14 aagtcactggaggcagcggttcatcgatctcttcctg 50
|||||||||||||||||||||||||||||||||||||
Sbjct: 7 aagtcactggaggcagcggttcatcgatctcttcctg 43
>41046_ghr-MIR162a:mirbase
Length = 148
Score = 69.9 bits (35), Expect = 4e-13
Identities = 86/98 (87%), Gaps = 5/98 (5%)
Strand = Plus / Plus
Query: 18 cactggaggcagcggttcatcgatctcttcctga-aatttggctgtg-gaatcctacaca 75
|||||||||||||||||||||||||||||||||| ||||| | |||| |||| |||||
Sbjct: 22 cactggaggcagcggttcatcgatctcttcctgagaattttgttgtgagaat--aacaca 79
Query: 76 aa-gcaagaatcgggcgataaacctctgcatccagcgc 112
|| || |||||| |||||||||||||||||||||||
Sbjct: 80 aatacatgaatcgatcgataaacctctgcatccagcgc 117
>41313_ptc-MIR162a:mirbase
Length = 107
Score = 67.9 bits (34), Expect = 2e-12
Identities = 37/38 (97%)
Strand = Plus / Plus
Query: 13 gaagtcactggaggcagcggttcatcgatctcttcctg 50
|||| |||||||||||||||||||||||||||||||||
Sbjct: 4 gaagacactggaggcagcggttcatcgatctcttcctg 41
Score = 48.1 bits (24), Expect = 2e-06
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 90 cgataaacctctgcatccagcgct 113
||||||||||||||||||||||||
Sbjct: 79 cgataaacctctgcatccagcgct 102
>40342_rco-MIR162:mirbase
Length = 101
Score = 67.9 bits (34), Expect = 2e-12
Identities = 34/34 (100%)
Strand = Plus / Plus
Query: 17 tcactggaggcagcggttcatcgatctcttcctg 50
||||||||||||||||||||||||||||||||||
Sbjct: 1 tcactggaggcagcggttcatcgatctcttcctg 34
>41090_tcc-MIR162:mirbase
Length = 131
Score = 65.9 bits (33), Expect = 7e-12
Identities = 33/33 (100%)
Strand = Plus / Plus
Query: 18 cactggaggcagcggttcatcgatctcttcctg 50
|||||||||||||||||||||||||||||||||
Sbjct: 19 cactggaggcagcggttcatcgatctcttcctg 51
>40663_mtr-MIR162:mirbase
Length = 124
Score = 65.9 bits (33), Expect = 7e-12
Identities = 83/99 (83%), Gaps = 3/99 (3%)
Strand = Plus / Plus
Query: 16 gtcactggaggcagcggttcatcgatctcttcctgaaatttggctgtggaatcctacaca 75
||||||||| |||||||||||||||||| |||||||| |||| ||| || || |
Sbjct: 17 gtcactggatgcagcggttcatcgatctgttcctgaattttgtttgt---ctcgtaaaac 73
Query: 76 aagcaagaatcgggcgataaacctctgcatccagcgctc 114
|| || ||||||| |||||||||||||||||||||||||
Sbjct: 74 aaacatgaatcggtcgataaacctctgcatccagcgctc 112
>41315_ptc-MIR162c:mirbase
Length = 107
Score = 63.9 bits (32), Expect = 3e-11
Identities = 38/40 (95%)
Strand = Plus / Plus
Query: 13 gaagtcactggaggcagcggttcatcgatctcttcctgaa 52
|||| |||||||||||||||||||||||||| ||||||||
Sbjct: 4 gaagacactggaggcagcggttcatcgatcttttcctgaa 43
Score = 40.1 bits (20), Expect = 4e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 90 cgataaacctctgcatccag 109
||||||||||||||||||||
Sbjct: 79 cgataaacctctgcatccag 98
>41314_ptc-MIR162b:mirbase
Length = 107
Score = 63.9 bits (32), Expect = 3e-11
Identities = 38/40 (95%)
Strand = Plus / Plus
Query: 13 gaagtcactggaggcagcggttcatcgatctcttcctgaa 52
|||| |||||||||||||||||||||||||| ||||||||
Sbjct: 4 gaagacactggaggcagcggttcatcgatcttttcctgaa 43
Score = 40.1 bits (20), Expect = 4e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 90 cgataaacctctgcatccag 109
||||||||||||||||||||
Sbjct: 79 cgataaacctctgcatccag 98
>41220_csi-MIR162:mirbase
Length = 201
Score = 63.9 bits (32), Expect = 3e-11
Identities = 32/32 (100%)
Strand = Plus / Plus
Query: 11 gtgaagtcactggaggcagcggttcatcgatc 42
||||||||||||||||||||||||||||||||
Sbjct: 80 gtgaagtcactggaggcagcggttcatcgatc 111
>40024_ath-MIR162a:mirbase
Length = 140
Score = 63.9 bits (32), Expect = 3e-11
Identities = 35/36 (97%)
Strand = Plus / Plus
Query: 15 agtcactggaggcagcggttcatcgatctcttcctg 50
|||| |||||||||||||||||||||||||||||||
Sbjct: 20 agtcgctggaggcagcggttcatcgatctcttcctg 55
Score = 44.1 bits (22), Expect = 2e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 90 cgataaacctctgcatccagcg 111
||||||||||||||||||||||
Sbjct: 90 cgataaacctctgcatccagcg 111
>39812_aly-MIR162a:mirbase
Length = 228
Score = 63.9 bits (32), Expect = 3e-11
Identities = 35/36 (97%)
Strand = Plus / Plus
Query: 15 agtcactggaggcagcggttcatcgatctcttcctg 50
|||| |||||||||||||||||||||||||||||||
Sbjct: 63 agtcgctggaggcagcggttcatcgatctcttcctg 98
Score = 44.1 bits (22), Expect = 2e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 90 cgataaacctctgcatccagcg 111
||||||||||||||||||||||
Sbjct: 137 cgataaacctctgcatccagcg 158
>40025_ath-MIR162b:mirbase
Length = 111
Score = 61.9 bits (31), Expect = 1e-10
Identities = 37/39 (94%)
Strand = Plus / Plus
Query: 75 aaagcaagaatcgggcgataaacctctgcatccagcgct 113
||||||||||||| ||||||||||||||||||||||||
Sbjct: 65 aaagcaagaatcgatcgataaacctctgcatccagcgct 103
Score = 56.0 bits (28), Expect = 7e-09
Identities = 31/32 (96%)
Strand = Plus / Plus
Query: 11 gtgaagtcactggaggcagcggttcatcgatc 42
|||||||| |||||||||||||||||||||||
Sbjct: 3 gtgaagtcgctggaggcagcggttcatcgatc 34
>39813_aly-MIR162b:mirbase
Length = 184
Score = 56.0 bits (28), Expect = 7e-09
Identities = 31/32 (96%)
Strand = Plus / Plus
Query: 11 gtgaagtcactggaggcagcggttcatcgatc 42
|||||||| |||||||||||||||||||||||
Sbjct: 41 gtgaagtcgctggaggcagcggttcatcgatc 72
Score = 54.0 bits (27), Expect = 3e-08
Identities = 36/39 (92%)
Strand = Plus / Plus
Query: 75 aaagcaagaatcgggcgataaacctctgcatccagcgct 113
|||||| |||||| ||||||||||||||||||||||||
Sbjct: 99 aaagcatgaatcgatcgataaacctctgcatccagcgct 137
>42708_zma-MIR162:mirbase
Length = 130
Score = 48.1 bits (24), Expect = 2e-06
Identities = 27/28 (96%)
Strand = Plus / Plus
Query: 82 gaatcgggcgataaacctctgcatccag 109
||||||| ||||||||||||||||||||
Sbjct: 103 gaatcggtcgataaacctctgcatccag 130
>41530_sly-MIR162:mirbase
Length = 99
Score = 48.1 bits (24), Expect = 2e-06
Identities = 27/28 (96%)
Strand = Plus / Plus
Query: 82 gaatcgggcgataaacctctgcatccag 109
||||||| ||||||||||||||||||||
Sbjct: 72 gaatcggtcgataaacctctgcatccag 99
>42502_sbi-MIR162:mirbase
Length = 127
Score = 40.1 bits (20), Expect = 4e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 90 cgataaacctctgcatccag 109
||||||||||||||||||||
Sbjct: 108 cgataaacctctgcatccag 127
>41929_osa-MIR162a:mirbase
Length = 171
Score = 40.1 bits (20), Expect = 4e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 90 cgataaacctctgcatccag 109
||||||||||||||||||||
Sbjct: 144 cgataaacctctgcatccag 163
