miRNEST 2.0, an integrative microRNA resource :: BLAST
>54784_vvi-miR162:pmrd
Length = 103
Score = 79.8 bits (40), Expect = 4e-16
Identities = 43/44 (97%)
Strand = Plus / Plus
Query: 12 tgaagtcactggaggcagcggttcatcgatctcttcctgaaatt 55
||||||||||||| ||||||||||||||||||||||||||||||
Sbjct: 1 tgaagtcactggatgcagcggttcatcgatctcttcctgaaatt 44
>48545_gma-miR162a:pmrd
Length = 102
Score = 75.8 bits (38), Expect = 7e-15
Identities = 41/42 (97%)
Strand = Plus / Plus
Query: 11 gtgaagtcactggaggcagcggttcatcgatctcttcctgaa 52
|||||||||||||| |||||||||||||||||||||||||||
Sbjct: 1 gtgaagtcactggatgcagcggttcatcgatctcttcctgaa 42
Score = 50.1 bits (25), Expect = 4e-07
Identities = 25/25 (100%)
Strand = Plus / Plus
Query: 90 cgataaacctctgcatccagcgctc 114
|||||||||||||||||||||||||
Sbjct: 74 cgataaacctctgcatccagcgctc 98
>48423_cpa-miR162a:pmrd
Length = 109
Score = 73.8 bits (37), Expect = 3e-14
Identities = 37/37 (100%)
Strand = Plus / Plus
Query: 14 aagtcactggaggcagcggttcatcgatctcttcctg 50
|||||||||||||||||||||||||||||||||||||
Sbjct: 7 aagtcactggaggcagcggttcatcgatctcttcctg 43
>48493_ghr-miR162a:pmrd
Length = 148
Score = 69.9 bits (35), Expect = 4e-13
Identities = 86/98 (87%), Gaps = 5/98 (5%)
Strand = Plus / Plus
Query: 18 cactggaggcagcggttcatcgatctcttcctga-aatttggctgtg-gaatcctacaca 75
|||||||||||||||||||||||||||||||||| ||||| | |||| |||| |||||
Sbjct: 22 cactggaggcagcggttcatcgatctcttcctgagaattttgttgtgagaat--aacaca 79
Query: 76 aa-gcaagaatcgggcgataaacctctgcatccagcgc 112
|| || |||||| |||||||||||||||||||||||
Sbjct: 80 aatacatgaatcgatcgataaacctctgcatccagcgc 117
>52400_ptc-miRf10578-akr:pmrd
Length = 103
Score = 67.9 bits (34), Expect = 2e-12
Identities = 37/38 (97%)
Strand = Plus / Minus
Query: 13 gaagtcactggaggcagcggttcatcgatctcttcctg 50
|||| |||||||||||||||||||||||||||||||||
Sbjct: 102 gaagacactggaggcagcggttcatcgatctcttcctg 65
Score = 48.1 bits (24), Expect = 2e-06
Identities = 24/24 (100%)
Strand = Plus / Minus
Query: 90 cgataaacctctgcatccagcgct 113
||||||||||||||||||||||||
Sbjct: 27 cgataaacctctgcatccagcgct 4
>52399_ptc-miRf10577-akr:pmrd
Length = 103
Score = 67.9 bits (34), Expect = 2e-12
Identities = 37/38 (97%)
Strand = Plus / Minus
Query: 13 gaagtcactggaggcagcggttcatcgatctcttcctg 50
|||| |||||||||||||||||||||||||||||||||
Sbjct: 102 gaagacactggaggcagcggttcatcgatctcttcctg 65
Score = 48.1 bits (24), Expect = 2e-06
Identities = 24/24 (100%)
Strand = Plus / Minus
Query: 90 cgataaacctctgcatccagcgct 113
||||||||||||||||||||||||
Sbjct: 27 cgataaacctctgcatccagcgct 4
>51616_ptc-miR162a:pmrd
Length = 107
Score = 67.9 bits (34), Expect = 2e-12
Identities = 37/38 (97%)
Strand = Plus / Plus
Query: 13 gaagtcactggaggcagcggttcatcgatctcttcctg 50
|||| |||||||||||||||||||||||||||||||||
Sbjct: 4 gaagacactggaggcagcggttcatcgatctcttcctg 41
Score = 48.1 bits (24), Expect = 2e-06
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 90 cgataaacctctgcatccagcgct 113
||||||||||||||||||||||||
Sbjct: 79 cgataaacctctgcatccagcgct 102
>54387_rco-miR162:pmrd
Length = 96
Score = 65.9 bits (33), Expect = 7e-12
Identities = 33/33 (100%)
Strand = Plus / Plus
Query: 18 cactggaggcagcggttcatcgatctcttcctg 50
|||||||||||||||||||||||||||||||||
Sbjct: 1 cactggaggcagcggttcatcgatctcttcctg 33
>52498_ptc-miRf10676-akr:pmrd
Length = 101
Score = 63.9 bits (32), Expect = 3e-11
Identities = 38/40 (95%)
Strand = Plus / Minus
Query: 13 gaagtcactggaggcagcggttcatcgatctcttcctgaa 52
|||| |||||||||||||||||||||||||| ||||||||
Sbjct: 101 gaagacactggaggcagcggttcatcgatcttttcctgaa 62
Score = 40.1 bits (20), Expect = 4e-04
Identities = 20/20 (100%)
Strand = Plus / Minus
Query: 90 cgataaacctctgcatccag 109
||||||||||||||||||||
Sbjct: 26 cgataaacctctgcatccag 7
>52497_ptc-miRf10675-akr:pmrd
Length = 105
Score = 63.9 bits (32), Expect = 3e-11
Identities = 38/40 (95%)
Strand = Plus / Minus
Query: 13 gaagtcactggaggcagcggttcatcgatctcttcctgaa 52
|||| |||||||||||||||||||||||||| ||||||||
Sbjct: 103 gaagacactggaggcagcggttcatcgatcttttcctgaa 64
Score = 40.1 bits (20), Expect = 4e-04
Identities = 20/20 (100%)
Strand = Plus / Minus
Query: 90 cgataaacctctgcatccag 109
||||||||||||||||||||
Sbjct: 28 cgataaacctctgcatccag 9
>52244_ptc-miRf10422-akr:pmrd
Length = 105
Score = 63.9 bits (32), Expect = 3e-11
Identities = 38/40 (95%)
Strand = Plus / Minus
Query: 13 gaagtcactggaggcagcggttcatcgatctcttcctgaa 52
|||| |||||||||||||||||||||||||| ||||||||
Sbjct: 103 gaagacactggaggcagcggttcatcgatcttttcctgaa 64
Score = 40.1 bits (20), Expect = 4e-04
Identities = 20/20 (100%)
Strand = Plus / Minus
Query: 90 cgataaacctctgcatccag 109
||||||||||||||||||||
Sbjct: 28 cgataaacctctgcatccag 9
>52243_ptc-miRf10421-akr:pmrd
Length = 101
Score = 63.9 bits (32), Expect = 3e-11
Identities = 38/40 (95%)
Strand = Plus / Minus
Query: 13 gaagtcactggaggcagcggttcatcgatctcttcctgaa 52
|||| |||||||||||||||||||||||||| ||||||||
Sbjct: 101 gaagacactggaggcagcggttcatcgatcttttcctgaa 62
Score = 40.1 bits (20), Expect = 4e-04
Identities = 20/20 (100%)
Strand = Plus / Minus
Query: 90 cgataaacctctgcatccag 109
||||||||||||||||||||
Sbjct: 26 cgataaacctctgcatccag 7
>51618_ptc-miR162c:pmrd
Length = 107
Score = 63.9 bits (32), Expect = 3e-11
Identities = 38/40 (95%)
Strand = Plus / Plus
Query: 13 gaagtcactggaggcagcggttcatcgatctcttcctgaa 52
|||| |||||||||||||||||||||||||| ||||||||
Sbjct: 4 gaagacactggaggcagcggttcatcgatcttttcctgaa 43
Score = 40.1 bits (20), Expect = 4e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 90 cgataaacctctgcatccag 109
||||||||||||||||||||
Sbjct: 79 cgataaacctctgcatccag 98
>51617_ptc-miR162b:pmrd
Length = 107
Score = 63.9 bits (32), Expect = 3e-11
Identities = 38/40 (95%)
Strand = Plus / Plus
Query: 13 gaagtcactggaggcagcggttcatcgatctcttcctgaa 52
|||| |||||||||||||||||||||||||| ||||||||
Sbjct: 4 gaagacactggaggcagcggttcatcgatcttttcctgaa 43
Score = 40.1 bits (20), Expect = 4e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 90 cgataaacctctgcatccag 109
||||||||||||||||||||
Sbjct: 79 cgataaacctctgcatccag 98
>46937_ath-miR162a:pmrd
Length = 140
Score = 63.9 bits (32), Expect = 3e-11
Identities = 35/36 (97%)
Strand = Plus / Plus
Query: 15 agtcactggaggcagcggttcatcgatctcttcctg 50
|||| |||||||||||||||||||||||||||||||
Sbjct: 20 agtcgctggaggcagcggttcatcgatctcttcctg 55
Score = 44.1 bits (22), Expect = 2e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 90 cgataaacctctgcatccagcg 111
||||||||||||||||||||||
Sbjct: 90 cgataaacctctgcatccagcg 111
>47354_ath-miRf10254-akr:pmrd
Length = 115
Score = 61.9 bits (31), Expect = 1e-10
Identities = 37/39 (94%)
Strand = Plus / Minus
Query: 75 aaagcaagaatcgggcgataaacctctgcatccagcgct 113
||||||||||||| ||||||||||||||||||||||||
Sbjct: 49 aaagcaagaatcgatcgataaacctctgcatccagcgct 11
Score = 56.0 bits (28), Expect = 7e-09
Identities = 31/32 (96%)
Strand = Plus / Minus
Query: 11 gtgaagtcactggaggcagcggttcatcgatc 42
|||||||| |||||||||||||||||||||||
Sbjct: 111 gtgaagtcgctggaggcagcggttcatcgatc 80
>46938_ath-miR162b:pmrd
Length = 111
Score = 61.9 bits (31), Expect = 1e-10
Identities = 37/39 (94%)
Strand = Plus / Plus
Query: 75 aaagcaagaatcgggcgataaacctctgcatccagcgct 113
||||||||||||| ||||||||||||||||||||||||
Sbjct: 65 aaagcaagaatcgatcgataaacctctgcatccagcgct 103
Score = 56.0 bits (28), Expect = 7e-09
Identities = 31/32 (96%)
Strand = Plus / Plus
Query: 11 gtgaagtcactggaggcagcggttcatcgatc 42
|||||||| |||||||||||||||||||||||
Sbjct: 3 gtgaagtcgctggaggcagcggttcatcgatc 34
>48546_gma-miR162m:pmrd
Length = 367
Score = 58.0 bits (29), Expect = 2e-09
Identities = 36/37 (97%), Gaps = 1/37 (2%)
Strand = Plus / Plus
Query: 90 cgataaacctctgcatccagcgctccactttgcctct 126
|||||||||||||||||||||||| ||||||||||||
Sbjct: 2 cgataaacctctgcatccagcgct-cactttgcctct 37
>48707_mtr-miR162d:pmrd
Length = 87
Score = 52.0 bits (26), Expect = 1e-07
Identities = 35/38 (92%)
Strand = Plus / Plus
Query: 20 ctggaggcagcggttcatcgatctcttcctgaaatttg 57
||||| |||||||||||||||||| |||||||| ||||
Sbjct: 1 ctggatgcagcggttcatcgatctgttcctgaattttg 38
Score = 48.1 bits (24), Expect = 2e-06
Identities = 27/28 (96%)
Strand = Plus / Plus
Query: 82 gaatcgggcgataaacctctgcatccag 109
||||||| ||||||||||||||||||||
Sbjct: 60 gaatcggtcgataaacctctgcatccag 87
>48706_mtr-miR162c:pmrd
Length = 86
Score = 52.0 bits (26), Expect = 1e-07
Identities = 35/38 (92%)
Strand = Plus / Minus
Query: 20 ctggaggcagcggttcatcgatctcttcctgaaatttg 57
||||| |||||||||||||||||| |||||||| ||||
Sbjct: 86 ctggatgcagcggttcatcgatctgttcctgaattttg 49
Score = 46.1 bits (23), Expect = 6e-06
Identities = 26/27 (96%)
Strand = Plus / Minus
Query: 82 gaatcgggcgataaacctctgcatcca 108
||||||| |||||||||||||||||||
Sbjct: 27 gaatcggtcgataaacctctgcatcca 1
>48705_mtr-miR162b:pmrd
Length = 85
Score = 50.1 bits (25), Expect = 4e-07
Identities = 34/37 (91%)
Strand = Plus / Plus
Query: 21 tggaggcagcggttcatcgatctcttcctgaaatttg 57
|||| |||||||||||||||||| |||||||| ||||
Sbjct: 1 tggatgcagcggttcatcgatctgttcctgaattttg 37
Score = 46.1 bits (23), Expect = 6e-06
Identities = 26/27 (96%)
Strand = Plus / Plus
Query: 82 gaatcgggcgataaacctctgcatcca 108
||||||| |||||||||||||||||||
Sbjct: 59 gaatcggtcgataaacctctgcatcca 85
>48685_lsa-miR162:pmrd
Length = 89
Score = 50.1 bits (25), Expect = 4e-07
Identities = 25/25 (100%)
Strand = Plus / Plus
Query: 90 cgataaacctctgcatccagcgctc 114
|||||||||||||||||||||||||
Sbjct: 2 cgataaacctctgcatccagcgctc 26
>48682_llu-miR162:pmrd
Length = 80
Score = 50.1 bits (25), Expect = 4e-07
Identities = 31/33 (93%)
Strand = Plus / Plus
Query: 20 ctggaggcagcggttcatcgatctcttcctgaa 52
||||| ||||||||| |||||||||||||||||
Sbjct: 1 ctggaagcagcggtttatcgatctcttcctgaa 33
Score = 46.1 bits (23), Expect = 6e-06
Identities = 35/39 (89%)
Strand = Plus / Plus
Query: 71 acacaaagcaagaatcgggcgataaacctctgcatccag 109
||||||| || |||||| ||||||||||||||||||||
Sbjct: 42 acacaaaccatgaatcgatcgataaacctctgcatccag 80
>54948_zma-miR162b:pmrd
Length = 130
Score = 48.1 bits (24), Expect = 2e-06
Identities = 27/28 (96%)
Strand = Plus / Plus
Query: 82 gaatcgggcgataaacctctgcatccag 109
||||||| ||||||||||||||||||||
Sbjct: 103 gaatcggtcgataaacctctgcatccag 130
>54542_sly-miR162:pmrd
Length = 99
Score = 48.1 bits (24), Expect = 2e-06
Identities = 27/28 (96%)
Strand = Plus / Plus
Query: 82 gaatcgggcgataaacctctgcatccag 109
||||||| ||||||||||||||||||||
Sbjct: 72 gaatcggtcgataaacctctgcatccag 99
>48834_osa-miR162a:pmrd
Length = 171
Score = 40.1 bits (20), Expect = 4e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 90 cgataaacctctgcatccag 109
||||||||||||||||||||
Sbjct: 144 cgataaacctctgcatccag 163
>48690_mdo-miR162:pmrd
Length = 88
Score = 40.1 bits (20), Expect = 4e-04
Identities = 23/24 (95%)
Strand = Plus / Plus
Query: 20 ctggaggcagcggttcatcgatct 43
||||||||| ||||||||||||||
Sbjct: 1 ctggaggcatcggttcatcgatct 24
