miRNEST 2.0, an integrative microRNA resource :: BLAST
>41046_ghr-MIR162a:mirbase
Length = 148
Score = 71.9 bits (36), Expect = 9e-14
Identities = 84/96 (87%), Gaps = 3/96 (3%)
Strand = Plus / Plus
Query: 10 cactggaggcatcggttcatcgatctgtttatgaga-ttttgttgtgagta-aacacagt 67
||||||||||| |||||||||||||| || ||||| |||||||||||| | ||||||
Sbjct: 22 cactggaggcagcggttcatcgatctcttcctgagaattttgttgtgagaataacacaaa 81
Query: 68 t-catgaatcggtcgataaacctttgcatccagcgc 102
| ||||||||| ||||||||||| ||||||||||||
Sbjct: 82 tacatgaatcgatcgataaacctctgcatccagcgc 117
>40329_cpa-MIR162a:mirbase
Length = 109
Score = 71.9 bits (36), Expect = 9e-14
Identities = 78/92 (84%)
Strand = Plus / Plus
Query: 10 cactggaggcatcggttcatcgatctgtttatgagattttgttgtgagtaaacacagttc 69
||||||||||| |||||||||||||| || || || |||| ||||| || ||||| |
Sbjct: 11 cactggaggcagcggttcatcgatctcttcctgggaatttggtgtgaaaaatcacagaac 70
Query: 70 atgaatcggtcgataaacctttgcatccagcg 101
|||||||| ||||||||||| |||||||||||
Sbjct: 71 atgaatcgatcgataaacctctgcatccagcg 102
>40663_mtr-MIR162:mirbase
Length = 124
Score = 69.9 bits (35), Expect = 4e-13
Identities = 38/39 (97%)
Strand = Plus / Plus
Query: 69 catgaatcggtcgataaacctttgcatccagcgctcact 107
||||||||||||||||||||| |||||||||||||||||
Sbjct: 77 catgaatcggtcgataaacctctgcatccagcgctcact 115
>41220_csi-MIR162:mirbase
Length = 201
Score = 63.9 bits (32), Expect = 2e-11
Identities = 38/40 (95%)
Strand = Plus / Plus
Query: 69 catgaatcggtcgataaacctttgcatccagcgctcactc 108
||||||||| ||||||||||| ||||||||||||||||||
Sbjct: 151 catgaatcgatcgataaacctctgcatccagcgctcactc 190
>40437_gma-MIR162:mirbase
Length = 102
Score = 63.9 bits (32), Expect = 2e-11
Identities = 38/40 (95%)
Strand = Plus / Plus
Query: 69 catgaatcggtcgataaacctttgcatccagcgctcactc 108
||||||||| ||||||||||| ||||||||||||||||||
Sbjct: 63 catgaatcgatcgataaacctctgcatccagcgctcactc 102
>41578_vvi-MIR162:mirbase
Length = 103
Score = 58.0 bits (29), Expect = 1e-09
Identities = 35/37 (94%)
Strand = Plus / Plus
Query: 72 gaatcggtcgataaacctttgcatccagcgctcactc 108
|||||||||||||||||| ||||||||||| ||||||
Sbjct: 66 gaatcggtcgataaacctctgcatccagcgttcactc 102
>39813_aly-MIR162b:mirbase
Length = 184
Score = 58.0 bits (29), Expect = 1e-09
Identities = 38/41 (92%)
Strand = Plus / Plus
Query: 69 catgaatcggtcgataaacctttgcatccagcgctcactct 109
||||||||| ||||||||||| ||||||||||||| |||||
Sbjct: 103 catgaatcgatcgataaacctctgcatccagcgcttactct 143
>40342_rco-MIR162:mirbase
Length = 101
Score = 54.0 bits (27), Expect = 2e-08
Identities = 33/35 (94%)
Strand = Plus / Plus
Query: 69 catgaatcggtcgataaacctttgcatccagcgct 103
||||||||| ||||||||||| |||||||||||||
Sbjct: 66 catgaatcgatcgataaacctctgcatccagcgct 100
Score = 44.1 bits (22), Expect = 2e-05
Identities = 25/26 (96%)
Strand = Plus / Plus
Query: 10 cactggaggcatcggttcatcgatct 35
||||||||||| ||||||||||||||
Sbjct: 2 cactggaggcagcggttcatcgatct 27
>41090_tcc-MIR162:mirbase
Length = 131
Score = 50.1 bits (25), Expect = 3e-07
Identities = 79/93 (84%), Gaps = 3/93 (3%)
Strand = Plus / Plus
Query: 10 cactggaggcatcggttcatcgatctgtttatgaga-ttttgttgtgagta-aacac-ag 66
||||||||||| |||||||||||||| || || || |||||||||||| | ||||| |
Sbjct: 19 cactggaggcagcggttcatcgatctcttcctgggaattttgttgtgagaataacacaaa 78
Query: 67 ttcatgaatcggtcgataaacctttgcatccag 99
| ||||| ||| ||||||||||| |||||||||
Sbjct: 79 tacatgattcgatcgataaacctctgcatccag 111
>42708_zma-MIR162:mirbase
Length = 130
Score = 48.1 bits (24), Expect = 1e-06
Identities = 27/28 (96%)
Strand = Plus / Plus
Query: 72 gaatcggtcgataaacctttgcatccag 99
|||||||||||||||||| |||||||||
Sbjct: 103 gaatcggtcgataaacctctgcatccag 130
>41530_sly-MIR162:mirbase
Length = 99
Score = 48.1 bits (24), Expect = 1e-06
Identities = 27/28 (96%)
Strand = Plus / Plus
Query: 72 gaatcggtcgataaacctttgcatccag 99
|||||||||||||||||| |||||||||
Sbjct: 72 gaatcggtcgataaacctctgcatccag 99
>40025_ath-MIR162b:mirbase
Length = 111
Score = 48.1 bits (24), Expect = 1e-06
Identities = 30/32 (93%)
Strand = Plus / Plus
Query: 72 gaatcggtcgataaacctttgcatccagcgct 103
|||||| ||||||||||| |||||||||||||
Sbjct: 72 gaatcgatcgataaacctctgcatccagcgct 103
>41313_ptc-MIR162a:mirbase
Length = 107
Score = 46.1 bits (23), Expect = 5e-06
Identities = 32/35 (91%)
Strand = Plus / Plus
Query: 69 catgaatcggtcgataaacctttgcatccagcgct 103
|||||| || ||||||||||| |||||||||||||
Sbjct: 68 catgaaccgatcgataaacctctgcatccagcgct 102
Score = 44.1 bits (22), Expect = 2e-05
Identities = 25/26 (96%)
Strand = Plus / Plus
Query: 10 cactggaggcatcggttcatcgatct 35
||||||||||| ||||||||||||||
Sbjct: 9 cactggaggcagcggttcatcgatct 34
>41315_ptc-MIR162c:mirbase
Length = 107
Score = 44.1 bits (22), Expect = 2e-05
Identities = 25/26 (96%)
Strand = Plus / Plus
Query: 10 cactggaggcatcggttcatcgatct 35
||||||||||| ||||||||||||||
Sbjct: 9 cactggaggcagcggttcatcgatct 34
>41314_ptc-MIR162b:mirbase
Length = 107
Score = 44.1 bits (22), Expect = 2e-05
Identities = 25/26 (96%)
Strand = Plus / Plus
Query: 10 cactggaggcatcggttcatcgatct 35
||||||||||| ||||||||||||||
Sbjct: 9 cactggaggcagcggttcatcgatct 34
>40024_ath-MIR162a:mirbase
Length = 140
Score = 42.1 bits (21), Expect = 8e-05
Identities = 30/33 (90%)
Strand = Plus / Plus
Query: 69 catgaatcggtcgataaacctttgcatccagcg 101
||||||| | ||||||||||| |||||||||||
Sbjct: 79 catgaatagatcgataaacctctgcatccagcg 111
Score = 40.1 bits (20), Expect = 3e-04
Identities = 23/24 (95%)
Strand = Plus / Plus
Query: 12 ctggaggcatcggttcatcgatct 35
||||||||| ||||||||||||||
Sbjct: 25 ctggaggcagcggttcatcgatct 48
>39812_aly-MIR162a:mirbase
Length = 228
Score = 42.1 bits (21), Expect = 8e-05
Identities = 30/33 (90%)
Strand = Plus / Plus
Query: 69 catgaatcggtcgataaacctttgcatccagcg 101
||||||| | ||||||||||| |||||||||||
Sbjct: 126 catgaatagatcgataaacctctgcatccagcg 158
Score = 40.1 bits (20), Expect = 3e-04
Identities = 23/24 (95%)
Strand = Plus / Plus
Query: 12 ctggaggcatcggttcatcgatct 35
||||||||| ||||||||||||||
Sbjct: 68 ctggaggcagcggttcatcgatct 91
>42502_sbi-MIR162:mirbase
Length = 127
Score = 40.1 bits (20), Expect = 3e-04
Identities = 26/28 (92%)
Strand = Plus / Plus
Query: 72 gaatcggtcgataaacctttgcatccag 99
|||||| ||||||||||| |||||||||
Sbjct: 100 gaatcgatcgataaacctctgcatccag 127
>41929_osa-MIR162a:mirbase
Length = 171
Score = 40.1 bits (20), Expect = 3e-04
Identities = 26/28 (92%)
Strand = Plus / Plus
Query: 72 gaatcggtcgataaacctttgcatccag 99
|||||| ||||||||||| |||||||||
Sbjct: 136 gaatcgatcgataaacctctgcatccag 163
