miRNEST 2.0, an integrative microRNA resource :: BLAST
>48690_mdo-miR162:pmrd
Length = 88
Score = 174 bits (88), Expect = 9e-45
Identities = 88/88 (100%)
Strand = Plus / Plus
Query: 12 ctggaggcatcggttcatcgatctgtttatgagattttgttgtgagtaaacacagttcat 71
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 ctggaggcatcggttcatcgatctgtttatgagattttgttgtgagtaaacacagttcat 60
Query: 72 gaatcggtcgataaacctttgcatccag 99
||||||||||||||||||||||||||||
Sbjct: 61 gaatcggtcgataaacctttgcatccag 88
>48493_ghr-miR162a:pmrd
Length = 148
Score = 71.9 bits (36), Expect = 9e-14
Identities = 84/96 (87%), Gaps = 3/96 (3%)
Strand = Plus / Plus
Query: 10 cactggaggcatcggttcatcgatctgtttatgaga-ttttgttgtgagta-aacacagt 67
||||||||||| |||||||||||||| || ||||| |||||||||||| | ||||||
Sbjct: 22 cactggaggcagcggttcatcgatctcttcctgagaattttgttgtgagaataacacaaa 81
Query: 68 t-catgaatcggtcgataaacctttgcatccagcgc 102
| ||||||||| ||||||||||| ||||||||||||
Sbjct: 82 tacatgaatcgatcgataaacctctgcatccagcgc 117
>48423_cpa-miR162a:pmrd
Length = 109
Score = 71.9 bits (36), Expect = 9e-14
Identities = 78/92 (84%)
Strand = Plus / Plus
Query: 10 cactggaggcatcggttcatcgatctgtttatgagattttgttgtgagtaaacacagttc 69
||||||||||| |||||||||||||| || || || |||| ||||| || ||||| |
Sbjct: 11 cactggaggcagcggttcatcgatctcttcctgggaatttggtgtgaaaaatcacagaac 70
Query: 70 atgaatcggtcgataaacctttgcatccagcg 101
|||||||| ||||||||||| |||||||||||
Sbjct: 71 atgaatcgatcgataaacctctgcatccagcg 102
>48545_gma-miR162a:pmrd
Length = 102
Score = 63.9 bits (32), Expect = 2e-11
Identities = 38/40 (95%)
Strand = Plus / Plus
Query: 69 catgaatcggtcgataaacctttgcatccagcgctcactc 108
||||||||| ||||||||||| ||||||||||||||||||
Sbjct: 63 catgaatcgatcgataaacctctgcatccagcgctcactc 102
>54784_vvi-miR162:pmrd
Length = 103
Score = 58.0 bits (29), Expect = 1e-09
Identities = 35/37 (94%)
Strand = Plus / Plus
Query: 72 gaatcggtcgataaacctttgcatccagcgctcactc 108
|||||||||||||||||| ||||||||||| ||||||
Sbjct: 66 gaatcggtcgataaacctctgcatccagcgttcactc 102
>48707_mtr-miR162d:pmrd
Length = 87
Score = 54.0 bits (27), Expect = 2e-08
Identities = 30/31 (96%)
Strand = Plus / Plus
Query: 69 catgaatcggtcgataaacctttgcatccag 99
||||||||||||||||||||| |||||||||
Sbjct: 57 catgaatcggtcgataaacctctgcatccag 87
>48706_mtr-miR162c:pmrd
Length = 86
Score = 52.0 bits (26), Expect = 9e-08
Identities = 29/30 (96%)
Strand = Plus / Minus
Query: 69 catgaatcggtcgataaacctttgcatcca 98
||||||||||||||||||||| ||||||||
Sbjct: 30 catgaatcggtcgataaacctctgcatcca 1
>48705_mtr-miR162b:pmrd
Length = 85
Score = 52.0 bits (26), Expect = 9e-08
Identities = 29/30 (96%)
Strand = Plus / Plus
Query: 69 catgaatcggtcgataaacctttgcatcca 98
||||||||||||||||||||| ||||||||
Sbjct: 56 catgaatcggtcgataaacctctgcatcca 85
>48546_gma-miR162m:pmrd
Length = 367
Score = 50.1 bits (25), Expect = 3e-07
Identities = 28/29 (96%)
Strand = Plus / Plus
Query: 79 tcgataaacctttgcatccagcgctcact 107
||||||||||| |||||||||||||||||
Sbjct: 1 tcgataaacctctgcatccagcgctcact 29
>54948_zma-miR162b:pmrd
Length = 130
Score = 48.1 bits (24), Expect = 1e-06
Identities = 27/28 (96%)
Strand = Plus / Plus
Query: 72 gaatcggtcgataaacctttgcatccag 99
|||||||||||||||||| |||||||||
Sbjct: 103 gaatcggtcgataaacctctgcatccag 130
>54542_sly-miR162:pmrd
Length = 99
Score = 48.1 bits (24), Expect = 1e-06
Identities = 27/28 (96%)
Strand = Plus / Plus
Query: 72 gaatcggtcgataaacctttgcatccag 99
|||||||||||||||||| |||||||||
Sbjct: 72 gaatcggtcgataaacctctgcatccag 99
>54387_rco-miR162:pmrd
Length = 96
Score = 48.1 bits (24), Expect = 1e-06
Identities = 30/32 (93%)
Strand = Plus / Plus
Query: 69 catgaatcggtcgataaacctttgcatccagc 100
||||||||| ||||||||||| ||||||||||
Sbjct: 65 catgaatcgatcgataaacctctgcatccagc 96
Score = 44.1 bits (22), Expect = 2e-05
Identities = 25/26 (96%)
Strand = Plus / Plus
Query: 10 cactggaggcatcggttcatcgatct 35
||||||||||| ||||||||||||||
Sbjct: 1 cactggaggcagcggttcatcgatct 26
>48685_lsa-miR162:pmrd
Length = 89
Score = 48.1 bits (24), Expect = 1e-06
Identities = 27/28 (96%)
Strand = Plus / Plus
Query: 79 tcgataaacctttgcatccagcgctcac 106
||||||||||| ||||||||||||||||
Sbjct: 1 tcgataaacctctgcatccagcgctcac 28
>47354_ath-miRf10254-akr:pmrd
Length = 115
Score = 48.1 bits (24), Expect = 1e-06
Identities = 30/32 (93%)
Strand = Plus / Minus
Query: 72 gaatcggtcgataaacctttgcatccagcgct 103
|||||| ||||||||||| |||||||||||||
Sbjct: 42 gaatcgatcgataaacctctgcatccagcgct 11
>46938_ath-miR162b:pmrd
Length = 111
Score = 48.1 bits (24), Expect = 1e-06
Identities = 30/32 (93%)
Strand = Plus / Plus
Query: 72 gaatcggtcgataaacctttgcatccagcgct 103
|||||| ||||||||||| |||||||||||||
Sbjct: 72 gaatcgatcgataaacctctgcatccagcgct 103
>52400_ptc-miRf10578-akr:pmrd
Length = 103
Score = 46.1 bits (23), Expect = 5e-06
Identities = 32/35 (91%)
Strand = Plus / Minus
Query: 69 catgaatcggtcgataaacctttgcatccagcgct 103
|||||| || ||||||||||| |||||||||||||
Sbjct: 38 catgaaccgatcgataaacctctgcatccagcgct 4
Score = 44.1 bits (22), Expect = 2e-05
Identities = 25/26 (96%)
Strand = Plus / Minus
Query: 10 cactggaggcatcggttcatcgatct 35
||||||||||| ||||||||||||||
Sbjct: 97 cactggaggcagcggttcatcgatct 72
>52399_ptc-miRf10577-akr:pmrd
Length = 103
Score = 46.1 bits (23), Expect = 5e-06
Identities = 32/35 (91%)
Strand = Plus / Minus
Query: 69 catgaatcggtcgataaacctttgcatccagcgct 103
|||||| || ||||||||||| |||||||||||||
Sbjct: 38 catgaaccgatcgataaacctctgcatccagcgct 4
Score = 44.1 bits (22), Expect = 2e-05
Identities = 25/26 (96%)
Strand = Plus / Minus
Query: 10 cactggaggcatcggttcatcgatct 35
||||||||||| ||||||||||||||
Sbjct: 97 cactggaggcagcggttcatcgatct 72
>51616_ptc-miR162a:pmrd
Length = 107
Score = 46.1 bits (23), Expect = 5e-06
Identities = 32/35 (91%)
Strand = Plus / Plus
Query: 69 catgaatcggtcgataaacctttgcatccagcgct 103
|||||| || ||||||||||| |||||||||||||
Sbjct: 68 catgaaccgatcgataaacctctgcatccagcgct 102
Score = 44.1 bits (22), Expect = 2e-05
Identities = 25/26 (96%)
Strand = Plus / Plus
Query: 10 cactggaggcatcggttcatcgatct 35
||||||||||| ||||||||||||||
Sbjct: 9 cactggaggcagcggttcatcgatct 34
>48682_llu-miR162:pmrd
Length = 80
Score = 46.1 bits (23), Expect = 5e-06
Identities = 29/31 (93%)
Strand = Plus / Plus
Query: 69 catgaatcggtcgataaacctttgcatccag 99
||||||||| ||||||||||| |||||||||
Sbjct: 50 catgaatcgatcgataaacctctgcatccag 80
>52498_ptc-miRf10676-akr:pmrd
Length = 101
Score = 44.1 bits (22), Expect = 2e-05
Identities = 25/26 (96%)
Strand = Plus / Minus
Query: 10 cactggaggcatcggttcatcgatct 35
||||||||||| ||||||||||||||
Sbjct: 96 cactggaggcagcggttcatcgatct 71
>52497_ptc-miRf10675-akr:pmrd
Length = 105
Score = 44.1 bits (22), Expect = 2e-05
Identities = 25/26 (96%)
Strand = Plus / Minus
Query: 10 cactggaggcatcggttcatcgatct 35
||||||||||| ||||||||||||||
Sbjct: 98 cactggaggcagcggttcatcgatct 73
>52244_ptc-miRf10422-akr:pmrd
Length = 105
Score = 44.1 bits (22), Expect = 2e-05
Identities = 25/26 (96%)
Strand = Plus / Minus
Query: 10 cactggaggcatcggttcatcgatct 35
||||||||||| ||||||||||||||
Sbjct: 98 cactggaggcagcggttcatcgatct 73
>52243_ptc-miRf10421-akr:pmrd
Length = 101
Score = 44.1 bits (22), Expect = 2e-05
Identities = 25/26 (96%)
Strand = Plus / Minus
Query: 10 cactggaggcatcggttcatcgatct 35
||||||||||| ||||||||||||||
Sbjct: 96 cactggaggcagcggttcatcgatct 71
>51618_ptc-miR162c:pmrd
Length = 107
Score = 44.1 bits (22), Expect = 2e-05
Identities = 25/26 (96%)
Strand = Plus / Plus
Query: 10 cactggaggcatcggttcatcgatct 35
||||||||||| ||||||||||||||
Sbjct: 9 cactggaggcagcggttcatcgatct 34
>51617_ptc-miR162b:pmrd
Length = 107
Score = 44.1 bits (22), Expect = 2e-05
Identities = 25/26 (96%)
Strand = Plus / Plus
Query: 10 cactggaggcatcggttcatcgatct 35
||||||||||| ||||||||||||||
Sbjct: 9 cactggaggcagcggttcatcgatct 34
>46937_ath-miR162a:pmrd
Length = 140
Score = 42.1 bits (21), Expect = 8e-05
Identities = 30/33 (90%)
Strand = Plus / Plus
Query: 69 catgaatcggtcgataaacctttgcatccagcg 101
||||||| | ||||||||||| |||||||||||
Sbjct: 79 catgaatagatcgataaacctctgcatccagcg 111
Score = 40.1 bits (20), Expect = 3e-04
Identities = 23/24 (95%)
Strand = Plus / Plus
Query: 12 ctggaggcatcggttcatcgatct 35
||||||||| ||||||||||||||
Sbjct: 25 ctggaggcagcggttcatcgatct 48
>48834_osa-miR162a:pmrd
Length = 171
Score = 40.1 bits (20), Expect = 3e-04
Identities = 26/28 (92%)
Strand = Plus / Plus
Query: 72 gaatcggtcgataaacctttgcatccag 99
|||||| ||||||||||| |||||||||
Sbjct: 136 gaatcgatcgataaacctctgcatccag 163
