miRNEST 2.0, an integrative microRNA resource :: BLAST
>51918_ptc-miRf10096-akr:pmrd
Length = 121
Score = 125 bits (63), Expect = 1e-29
Identities = 109/124 (87%), Gaps = 4/124 (3%)
Strand = Plus / Plus
Query: 20 caaagggtttcttacagagtttattggcattctgtccacctcccatctgtagaaatctgt 79
||||||||||||||||||||||||||||||||||||||||||| |||| ||||||| |
Sbjct: 2 caaagggtttcttacagagtttattggcattctgtccacctcctatctttagaaattaga 61
Query: 80 ctctctcacgagctcacatggaggtgggcatactgccaactgagctctgttggtctctct 139
| |||| ||| ||||||||||||||||||||||| |||||||||||||||||||
Sbjct: 62 atatctc----tttcatatggaggtgggcatactgccaaccgagctctgttggtctctct 117
Query: 140 ttgt 143
||||
Sbjct: 118 ttgt 121
>54852_vvi-miR394b:pmrd
Length = 93
Score = 69.9 bits (35), Expect = 6e-13
Identities = 35/35 (100%)
Strand = Plus / Plus
Query: 33 acagagtttattggcattctgtccacctcccatct 67
|||||||||||||||||||||||||||||||||||
Sbjct: 1 acagagtttattggcattctgtccacctcccatct 35
Score = 50.1 bits (25), Expect = 5e-07
Identities = 31/33 (93%)
Strand = Plus / Plus
Query: 98 tggaggtgggcatactgccaactgagctctgtt 130
|||||||||||||||||||||| |||||||||
Sbjct: 61 tggaggtgggcatactgccaaccaagctctgtt 93
>55065_zma-miR394b:pmrd
Length = 122
Score = 42.1 bits (21), Expect = 1e-04
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 43 ttggcattctgtccacctccc 63
|||||||||||||||||||||
Sbjct: 21 ttggcattctgtccacctccc 41
Score = 42.1 bits (21), Expect = 1e-04
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 98 tggaggtgggcatactgccaa 118
|||||||||||||||||||||
Sbjct: 83 tggaggtgggcatactgccaa 103
>55064_zma-miR394a:pmrd
Length = 126
Score = 42.1 bits (21), Expect = 1e-04
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 98 tggaggtgggcatactgccaa 118
|||||||||||||||||||||
Sbjct: 87 tggaggtgggcatactgccaa 107
Score = 40.1 bits (20), Expect = 5e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 43 ttggcattctgtccacctcc 62
||||||||||||||||||||
Sbjct: 21 ttggcattctgtccacctcc 40
>48920_osa-miR394:pmrd
Length = 110
Score = 42.1 bits (21), Expect = 1e-04
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 98 tggaggtgggcatactgccaa 118
|||||||||||||||||||||
Sbjct: 76 tggaggtgggcatactgccaa 96
Score = 40.1 bits (20), Expect = 5e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 43 ttggcattctgtccacctcc 62
||||||||||||||||||||
Sbjct: 14 ttggcattctgtccacctcc 33
>47001_ath-miR394b:pmrd
Length = 121
Score = 42.1 bits (21), Expect = 1e-04
Identities = 30/33 (90%)
Strand = Plus / Plus
Query: 30 cttacagagtttattggcattctgtccacctcc 62
||||||||| | ||||||||||||||||||||
Sbjct: 1 cttacagagatctttggcattctgtccacctcc 33
Score = 40.1 bits (20), Expect = 5e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 99 ggaggtgggcatactgccaa 118
||||||||||||||||||||
Sbjct: 88 ggaggtgggcatactgccaa 107
>54853_vvi-miR394c:pmrd
Length = 102
Score = 40.1 bits (20), Expect = 5e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 43 ttggcattctgtccacctcc 62
||||||||||||||||||||
Sbjct: 11 ttggcattctgtccacctcc 30
>54851_vvi-miR394a:pmrd
Length = 89
Score = 40.1 bits (20), Expect = 5e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 43 ttggcattctgtccacctcc 62
||||||||||||||||||||
Sbjct: 11 ttggcattctgtccacctcc 30
>54472_sbi-miR394b:pmrd
Length = 111
Score = 40.1 bits (20), Expect = 5e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 43 ttggcattctgtccacctcc 62
||||||||||||||||||||
Sbjct: 21 ttggcattctgtccacctcc 40
>54471_sbi-miR394a:pmrd
Length = 110
Score = 40.1 bits (20), Expect = 5e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 43 ttggcattctgtccacctcc 62
||||||||||||||||||||
Sbjct: 21 ttggcattctgtccacctcc 40
>48502_ghr-miR394:pmrd
Length = 97
Score = 40.1 bits (20), Expect = 5e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 43 ttggcattctgtccacctcc 62
||||||||||||||||||||
Sbjct: 1 ttggcattctgtccacctcc 20
>47000_ath-miR394a:pmrd
Length = 117
Score = 40.1 bits (20), Expect = 5e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 43 ttggcattctgtccacctcc 62
||||||||||||||||||||
Sbjct: 14 ttggcattctgtccacctcc 33
