miRNEST 2.0, an integrative microRNA resource :: BLAST
>41046_ghr-MIR162a:mirbase
Length = 148
Score = 137 bits (69), Expect = 3e-33
Identities = 91/97 (93%), Gaps = 1/97 (1%)
Strand = Plus / Plus
Query: 29 cactggaggcagcggttcatcgatctcttcctggaggattttgttgtgaaattagcacaa 88
||||||||||||||||||||||||||||||||| || |||||||||||| | || |||||
Sbjct: 22 cactggaggcagcggttcatcgatctcttcctg-agaattttgttgtgagaataacacaa 80
Query: 89 acacatgaatcgatcgataaacctctgcatccagcgc 125
| |||||||||||||||||||||||||||||||||||
Sbjct: 81 atacatgaatcgatcgataaacctctgcatccagcgc 117
>41090_tcc-MIR162:mirbase
Length = 131
Score = 127 bits (64), Expect = 3e-30
Identities = 95/104 (91%), Gaps = 1/104 (0%)
Strand = Plus / Plus
Query: 19 gggttgaagtcactggaggcagcggttcatcgatctcttcctggaggattttgttgtgaa 78
||||| ||| |||||||||||||||||||||||||||||||||| | ||||||||||||
Sbjct: 9 gggttaaagacactggaggcagcggttcatcgatctcttcctgg-gaattttgttgtgag 67
Query: 79 attagcacaaacacatgaatcgatcgataaacctctgcatccag 122
| || |||||| |||||| |||||||||||||||||||||||||
Sbjct: 68 aataacacaaatacatgattcgatcgataaacctctgcatccag 111
>40342_rco-MIR162:mirbase
Length = 101
Score = 127 bits (64), Expect = 3e-30
Identities = 92/100 (92%), Gaps = 1/100 (1%)
Strand = Plus / Plus
Query: 28 tcactggaggcagcggttcatcgatctcttcctggaggattttgttgtgaaattagca-c 86
|||||||||||||||||||||||||||||||||||| ||||||||||||||| | |
Sbjct: 1 tcactggaggcagcggttcatcgatctcttcctggaagattttgttgtgaaacaaaaata 60
Query: 87 aaacacatgaatcgatcgataaacctctgcatccagcgct 126
|||| |||||||||||||||||||||||||||||||||||
Sbjct: 61 aaacgcatgaatcgatcgataaacctctgcatccagcgct 100
>41220_csi-MIR162:mirbase
Length = 201
Score = 105 bits (53), Expect = 9e-24
Identities = 98/109 (89%), Gaps = 3/109 (2%)
Strand = Plus / Plus
Query: 23 tgaagtcactggaggcagcggttcatcgatctcttcctggaggattttgttgtgaaat-t 81
||||||||||||||||||||||||||||||| ||| || | |||||||||||||| |
Sbjct: 81 tgaagtcactggaggcagcggttcatcgatcactttgtgcaa-attttgttgtgaaaaat 139
Query: 82 agcacaaac-acatgaatcgatcgataaacctctgcatccagcgctcac 129
| |||||| |||||||||||||||||||||||||||||||||||||||
Sbjct: 140 aacacaaaatacatgaatcgatcgataaacctctgcatccagcgctcac 188
>40329_cpa-MIR162a:mirbase
Length = 109
Score = 105 bits (53), Expect = 9e-24
Identities = 91/100 (91%), Gaps = 4/100 (4%)
Strand = Plus / Plus
Query: 25 aagtcactggaggcagcggttcatcgatctcttcctggaggattttgttgtgaaattagc 84
||||||||||||||||||||||||||||||||||||| ||| |||| ||||||| | |
Sbjct: 7 aagtcactggaggcagcggttcatcgatctcttcctg--ggaatttggtgtgaaa-aatc 63
Query: 85 acaaacacatgaatcgatcgataaacctctgcatccagcg 124
||| | ||||||||||||||||||||||||||||||||||
Sbjct: 64 acaga-acatgaatcgatcgataaacctctgcatccagcg 102
>41313_ptc-MIR162a:mirbase
Length = 107
Score = 93.7 bits (47), Expect = 4e-20
Identities = 92/104 (88%), Gaps = 6/104 (5%)
Strand = Plus / Plus
Query: 24 gaagtcactggaggcagcggttcatcgatctcttcctggaggattttgttgtgaaattag 83
|||| |||||||||||||||||||||||||||||||||| ||||| |||| ||||
Sbjct: 4 gaagacactggaggcagcggttcatcgatctcttcctggccaatttt-ttgt----ttag 58
Query: 84 cac-aaacacatgaatcgatcgataaacctctgcatccagcgct 126
||| ||| ||||||| ||||||||||||||||||||||||||||
Sbjct: 59 cacgaaaaacatgaaccgatcgataaacctctgcatccagcgct 102
>40437_gma-MIR162:mirbase
Length = 102
Score = 75.8 bits (38), Expect = 8e-15
Identities = 38/38 (100%)
Strand = Plus / Plus
Query: 92 catgaatcgatcgataaacctctgcatccagcgctcac 129
||||||||||||||||||||||||||||||||||||||
Sbjct: 63 catgaatcgatcgataaacctctgcatccagcgctcac 100
Score = 69.9 bits (35), Expect = 5e-13
Identities = 38/39 (97%)
Strand = Plus / Plus
Query: 23 tgaagtcactggaggcagcggttcatcgatctcttcctg 61
||||||||||||| |||||||||||||||||||||||||
Sbjct: 2 tgaagtcactggatgcagcggttcatcgatctcttcctg 40
>41578_vvi-MIR162:mirbase
Length = 103
Score = 71.9 bits (36), Expect = 1e-13
Identities = 90/107 (84%), Gaps = 7/107 (6%)
Strand = Plus / Plus
Query: 23 tgaagtcactggaggcagcggttcatcgatctcttcctggaggattttgttgtgaaatta 82
||||||||||||| |||||||||||||||||||||||| || ||||||||||| |
Sbjct: 1 tgaagtcactggatgcagcggttcatcgatctcttcct----gaaattgttgtgaaaaaa 56
Query: 83 gcacaaacacatgaatcgatcgataaacctctgcatccagcgctcac 129
||| | || |||||| ||||||||||||||||||||||| ||||
Sbjct: 57 gcaga---tcaagaatcggtcgataaacctctgcatccagcgttcac 100
>40663_mtr-MIR162:mirbase
Length = 124
Score = 69.9 bits (35), Expect = 5e-13
Identities = 38/39 (97%)
Strand = Plus / Plus
Query: 91 acatgaatcgatcgataaacctctgcatccagcgctcac 129
|||||||||| ||||||||||||||||||||||||||||
Sbjct: 76 acatgaatcggtcgataaacctctgcatccagcgctcac 114
Score = 54.0 bits (27), Expect = 3e-08
Identities = 33/35 (94%)
Strand = Plus / Plus
Query: 27 gtcactggaggcagcggttcatcgatctcttcctg 61
||||||||| |||||||||||||||||| ||||||
Sbjct: 17 gtcactggatgcagcggttcatcgatctgttcctg 51
>39813_aly-MIR162b:mirbase
Length = 184
Score = 69.9 bits (35), Expect = 5e-13
Identities = 35/35 (100%)
Strand = Plus / Plus
Query: 92 catgaatcgatcgataaacctctgcatccagcgct 126
|||||||||||||||||||||||||||||||||||
Sbjct: 103 catgaatcgatcgataaacctctgcatccagcgct 137
Score = 54.0 bits (27), Expect = 3e-08
Identities = 30/31 (96%)
Strand = Plus / Plus
Query: 23 tgaagtcactggaggcagcggttcatcgatc 53
||||||| |||||||||||||||||||||||
Sbjct: 42 tgaagtcgctggaggcagcggttcatcgatc 72
>39812_aly-MIR162a:mirbase
Length = 228
Score = 65.9 bits (33), Expect = 8e-12
Identities = 36/37 (97%)
Strand = Plus / Plus
Query: 26 agtcactggaggcagcggttcatcgatctcttcctgg 62
|||| ||||||||||||||||||||||||||||||||
Sbjct: 63 agtcgctggaggcagcggttcatcgatctcttcctgg 99
Score = 58.0 bits (29), Expect = 2e-09
Identities = 32/33 (96%)
Strand = Plus / Plus
Query: 92 catgaatcgatcgataaacctctgcatccagcg 124
||||||| |||||||||||||||||||||||||
Sbjct: 126 catgaatagatcgataaacctctgcatccagcg 158
>40025_ath-MIR162b:mirbase
Length = 111
Score = 63.9 bits (32), Expect = 3e-11
Identities = 32/32 (100%)
Strand = Plus / Plus
Query: 95 gaatcgatcgataaacctctgcatccagcgct 126
||||||||||||||||||||||||||||||||
Sbjct: 72 gaatcgatcgataaacctctgcatccagcgct 103
Score = 54.0 bits (27), Expect = 3e-08
Identities = 30/31 (96%)
Strand = Plus / Plus
Query: 23 tgaagtcactggaggcagcggttcatcgatc 53
||||||| |||||||||||||||||||||||
Sbjct: 4 tgaagtcgctggaggcagcggttcatcgatc 34
>40024_ath-MIR162a:mirbase
Length = 140
Score = 63.9 bits (32), Expect = 3e-11
Identities = 35/36 (97%)
Strand = Plus / Plus
Query: 26 agtcactggaggcagcggttcatcgatctcttcctg 61
|||| |||||||||||||||||||||||||||||||
Sbjct: 20 agtcgctggaggcagcggttcatcgatctcttcctg 55
Score = 58.0 bits (29), Expect = 2e-09
Identities = 32/33 (96%)
Strand = Plus / Plus
Query: 92 catgaatcgatcgataaacctctgcatccagcg 124
||||||| |||||||||||||||||||||||||
Sbjct: 79 catgaatagatcgataaacctctgcatccagcg 111
>41315_ptc-MIR162c:mirbase
Length = 107
Score = 61.9 bits (31), Expect = 1e-10
Identities = 85/100 (85%), Gaps = 6/100 (6%)
Strand = Plus / Plus
Query: 24 gaagtcactggaggcagcggttcatcgatctcttcctggaggattttgttgtgaaattag 83
|||| |||||||||||||||||||||||||| ||||| || |||||| |||| ||
Sbjct: 4 gaagacactggaggcagcggttcatcgatcttttcct-gaagatttttttgt----ttta 58
Query: 84 cacaaac-acatgaatcgatcgataaacctctgcatccag 122
||| ||| ||| ||| ||||||||||||||||||||||||
Sbjct: 59 cacgaacaacacgaaccgatcgataaacctctgcatccag 98
>41314_ptc-MIR162b:mirbase
Length = 107
Score = 61.9 bits (31), Expect = 1e-10
Identities = 85/100 (85%), Gaps = 6/100 (6%)
Strand = Plus / Plus
Query: 24 gaagtcactggaggcagcggttcatcgatctcttcctggaggattttgttgtgaaattag 83
|||| |||||||||||||||||||||||||| ||||| || |||||| |||| ||
Sbjct: 4 gaagacactggaggcagcggttcatcgatcttttcct-gaagatttttttgt----ttta 58
Query: 84 cacaaac-acatgaatcgatcgataaacctctgcatccag 122
||| ||| ||| ||| ||||||||||||||||||||||||
Sbjct: 59 cacgaacaacacgaaccgatcgataaacctctgcatccag 98
>42502_sbi-MIR162:mirbase
Length = 127
Score = 56.0 bits (28), Expect = 8e-09
Identities = 28/28 (100%)
Strand = Plus / Plus
Query: 95 gaatcgatcgataaacctctgcatccag 122
||||||||||||||||||||||||||||
Sbjct: 100 gaatcgatcgataaacctctgcatccag 127
>41929_osa-MIR162a:mirbase
Length = 171
Score = 56.0 bits (28), Expect = 8e-09
Identities = 28/28 (100%)
Strand = Plus / Plus
Query: 95 gaatcgatcgataaacctctgcatccag 122
||||||||||||||||||||||||||||
Sbjct: 136 gaatcgatcgataaacctctgcatccag 163
>41736_bdi-MIR162:mirbase
Length = 133
Score = 52.0 bits (26), Expect = 1e-07
Identities = 26/26 (100%)
Strand = Plus / Plus
Query: 95 gaatcgatcgataaacctctgcatcc 120
||||||||||||||||||||||||||
Sbjct: 104 gaatcgatcgataaacctctgcatcc 129
>42708_zma-MIR162:mirbase
Length = 130
Score = 48.1 bits (24), Expect = 2e-06
Identities = 27/28 (96%)
Strand = Plus / Plus
Query: 95 gaatcgatcgataaacctctgcatccag 122
|||||| |||||||||||||||||||||
Sbjct: 103 gaatcggtcgataaacctctgcatccag 130
>41930_osa-MIR162b:mirbase
Length = 134
Score = 48.1 bits (24), Expect = 2e-06
Identities = 27/28 (96%)
Strand = Plus / Plus
Query: 95 gaatcgatcgataaacctctgcatccag 122
|||||||||||||| |||||||||||||
Sbjct: 97 gaatcgatcgataagcctctgcatccag 124
>41530_sly-MIR162:mirbase
Length = 99
Score = 48.1 bits (24), Expect = 2e-06
Identities = 27/28 (96%)
Strand = Plus / Plus
Query: 95 gaatcgatcgataaacctctgcatccag 122
|||||| |||||||||||||||||||||
Sbjct: 72 gaatcggtcgataaacctctgcatccag 99
