miRNEST 2.0: an integrative microRNA resource miRNEST 2.0, an integrative microRNA resource :: BLAST


>54877_vvi-miR399a:pmrd
          Length = 97

 Score = 60.0 bits (30), Expect = 4e-10
 Identities = 30/30 (100%)
 Strand = Plus / Plus

                                         
Query: 91  ctgccaaaggagaattgccctgttattcaa 120
           ||||||||||||||||||||||||||||||
Sbjct: 66  ctgccaaaggagaattgccctgttattcaa 95



 Score = 42.1 bits (21), Expect = 1e-04
 Identities = 27/29 (93%)
 Strand = Plus / Plus

                                       
Query: 20 agaatatcagtgcgattctcctttggcag 48
          |||||| ||||| ||||||||||||||||
Sbjct: 2  agaataacagtgtgattctcctttggcag 30




>51753_ptc-miR399g:pmrd
          Length = 94

 Score = 46.1 bits (23), Expect = 7e-06
 Identities = 29/31 (93%)
 Strand = Plus / Plus

                                          
Query: 91  ctgccaaaggagaattgccctgttattcaac 121
           ||||||||||||||||||||||  |||||||
Sbjct: 64  ctgccaaaggagaattgccctgccattcaac 94



 Score = 42.1 bits (21), Expect = 1e-04
 Identities = 27/29 (93%)
 Strand = Plus / Minus

                                        
Query: 91  ctgccaaaggagaattgccctgttattca 119
           |||||||||||||||||| | ||||||||
Sbjct: 32  ctgccaaaggagaattgcacagttattca 4




>55102_zma-miR399l:pmrd
          Length = 86

 Score = 44.1 bits (22), Expect = 3e-05
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                 
Query: 92  tgccaaaggagaattgccctgt 113
           ||||||||||||||||||||||
Sbjct: 65  tgccaaaggagaattgccctgt 86




>54496_sbi-miR399h:pmrd
          Length = 132

 Score = 44.1 bits (22), Expect = 3e-05
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                 
Query: 91  ctgccaaaggagaattgccctg 112
           ||||||||||||||||||||||
Sbjct: 92  ctgccaaaggagaattgccctg 113




>53710_ptc-miRf11888-akr:pmrd
          Length = 89

 Score = 44.1 bits (22), Expect = 3e-05
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                 
Query: 91  ctgccaaaggagaattgccctg 112
           ||||||||||||||||||||||
Sbjct: 29  ctgccaaaggagaattgccctg 8



 Score = 42.1 bits (21), Expect = 1e-04
 Identities = 27/29 (93%)
 Strand = Plus / Plus

                                        
Query: 91  ctgccaaaggagaattgccctgttattca 119
           |||||||||||||||||| | ||||||||
Sbjct: 61  ctgccaaaggagaattgcacagttattca 89




>50193_osa-miRf10978-akr:pmrd
          Length = 105

 Score = 44.1 bits (22), Expect = 3e-05
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                 
Query: 91  ctgccaaaggagaattgccctg 112
           ||||||||||||||||||||||
Sbjct: 78  ctgccaaaggagaattgccctg 99




>55101_zma-miR399k:pmrd
          Length = 168

 Score = 42.1 bits (21), Expect = 1e-04
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 92  tgccaaaggagaattgccctg 112
           |||||||||||||||||||||
Sbjct: 148 tgccaaaggagaattgccctg 168




>55093_zma-miR399c:pmrd
          Length = 207

 Score = 42.1 bits (21), Expect = 1e-04
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 92  tgccaaaggagaattgccctg 112
           |||||||||||||||||||||
Sbjct: 168 tgccaaaggagaattgccctg 188




>55091_zma-miR399a:pmrd
          Length = 123

 Score = 42.1 bits (21), Expect = 1e-04
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 92  tgccaaaggagaattgccctg 112
           |||||||||||||||||||||
Sbjct: 84  tgccaaaggagaattgccctg 104




>54884_vvi-miR399h:pmrd
          Length = 90

 Score = 42.1 bits (21), Expect = 1e-04
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 92  tgccaaaggagaattgccctg 112
           |||||||||||||||||||||
Sbjct: 60  tgccaaaggagaattgccctg 80



 Score = 40.1 bits (20), Expect = 4e-04
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                       
Query: 91  ctgccaaaggagaattgccctgttattc 118
           |||||||||||| ||||| |||||||||
Sbjct: 30  ctgccaaaggaggattgcactgttattc 3




>54498_sbi-miR399j:pmrd
          Length = 93

 Score = 42.1 bits (21), Expect = 1e-04
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 92  tgccaaaggagaattgccctg 112
           |||||||||||||||||||||
Sbjct: 71  tgccaaaggagaattgccctg 91




>54491_sbi-miR399c:pmrd
          Length = 130

 Score = 42.1 bits (21), Expect = 1e-04
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 92  tgccaaaggagaattgccctg 112
           |||||||||||||||||||||
Sbjct: 91  tgccaaaggagaattgccctg 111




>54489_sbi-miR399a:pmrd
          Length = 137

 Score = 42.1 bits (21), Expect = 1e-04
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 92  tgccaaaggagaattgccctg 112
           |||||||||||||||||||||
Sbjct: 98  tgccaaaggagaattgccctg 118




>52804_ptc-miRf10982-akr:pmrd
          Length = 94

 Score = 42.1 bits (21), Expect = 1e-04
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                
Query: 92  tgccaaaggagaattgccctg 112
           |||||||||||||||||||||
Sbjct: 27  tgccaaaggagaattgccctg 7




>51752_ptc-miR399f:pmrd
          Length = 101

 Score = 42.1 bits (21), Expect = 1e-04
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 92  tgccaaaggagaattgccctg 112
           |||||||||||||||||||||
Sbjct: 72  tgccaaaggagaattgccctg 92




>48966_osa-miR399c:pmrd
          Length = 110

 Score = 42.1 bits (21), Expect = 1e-04
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 92  tgccaaaggagaattgccctg 112
           |||||||||||||||||||||
Sbjct: 80  tgccaaaggagaattgccctg 100




>48965_osa-miR399b:pmrd
          Length = 97

 Score = 42.1 bits (21), Expect = 1e-04
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 92  tgccaaaggagaattgccctg 112
           |||||||||||||||||||||
Sbjct: 67  tgccaaaggagaattgccctg 87




>48964_osa-miR399a:pmrd
          Length = 149

 Score = 42.1 bits (21), Expect = 1e-04
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 92  tgccaaaggagaattgccctg 112
           |||||||||||||||||||||
Sbjct: 119 tgccaaaggagaattgccctg 139




>47015_ath-miR399a:pmrd
          Length = 123

 Score = 40.1 bits (20), Expect = 4e-04
 Identities = 26/28 (92%)
 Strand = Plus / Plus

                                       
Query: 91  ctgccaaaggagaattgccctgttattc 118
           ||||||||||||| ||||||||| ||||
Sbjct: 92  ctgccaaaggagatttgccctgtaattc 119