miRNEST 2.0, an integrative microRNA resource :: BLAST
>51762_ptc-miR408:pmrd
Length = 105
Score = 123 bits (62), Expect = 4e-29
Identities = 86/94 (91%)
Strand = Plus / Plus
Query: 31 aagactgggaacaggcagagcatggatggagctattaatggaaatatctgttttggctcc 90
||||| |||||||||||||||||||||||||||| ||| ||| || |||||||||||
Sbjct: 12 aagacggggaacaggcagagcatggatggagctactaacagaagtacttgttttggctct 71
Query: 91 acccatgcactgcctcttccctggcttgtggctc 124
||||||||||||||||||||||||||||||||||
Sbjct: 72 acccatgcactgcctcttccctggcttgtggctc 105
>54389_rco-miR408:pmrd
Length = 129
Score = 103 bits (52), Expect = 4e-23
Identities = 83/92 (90%), Gaps = 1/92 (1%)
Strand = Plus / Plus
Query: 27 gacaaagactgggaacaggcagagcatggatggagctattaatggaaat-atctgttttg 85
|||||||||||||||||||||| |||||||||| |||| ||| |||| ||||||||||
Sbjct: 21 gacaaagactgggaacaggcagtgcatggatggggctactaacagaaaacatctgttttg 80
Query: 86 gctccacccatgcactgcctcttccctggctt 117
|||| |||| ||||||||||||||||||||||
Sbjct: 81 gctctacccctgcactgcctcttccctggctt 112
>53677_ptc-miRf11855-akr:pmrd
Length = 79
Score = 97.6 bits (49), Expect = 2e-21
Identities = 70/77 (90%)
Strand = Plus / Plus
Query: 37 gggaacaggcagagcatggatggagctattaatggaaatatctgttttggctccacccat 96
|||||||||||||||||||||||||||| ||| ||| || ||||||||||| ||||||
Sbjct: 3 gggaacaggcagagcatggatggagctactaacagaagtacttgttttggctctacccat 62
Query: 97 gcactgcctcttccctg 113
|||||||||||||||||
Sbjct: 63 gcactgcctcttccctg 79
>48428_cpt-miR408:pmrd
Length = 100
Score = 85.7 bits (43), Expect = 8e-18
Identities = 77/87 (88%), Gaps = 1/87 (1%)
Strand = Plus / Plus
Query: 30 aaagactgggaacaggcagagcatggatggagctattaatggaaatatctgttttggctc 89
|||||| |||||||||||||||||||||||| | ||||| | | |||||||||||||
Sbjct: 6 aaagacggggaacaggcagagcatggatggaaccattaacaggt-tctctgttttggctc 64
Query: 90 cacccatgcactgcctcttccctggct 116
| |||||||||||||||||||||||||
Sbjct: 65 ctcccatgcactgcctcttccctggct 91
>48142_ath-miRf11042-akr:pmrd
Length = 99
Score = 63.9 bits (32), Expect = 3e-11
Identities = 38/40 (95%)
Strand = Plus / Minus
Query: 77 tctgttttggctccacccatgcactgcctcttccctggct 116
||||||||| ||| ||||||||||||||||||||||||||
Sbjct: 44 tctgttttgtctctacccatgcactgcctcttccctggct 5
>47031_ath-miR408:pmrd
Length = 218
Score = 63.9 bits (32), Expect = 3e-11
Identities = 38/40 (95%)
Strand = Plus / Plus
Query: 77 tctgttttggctccacccatgcactgcctcttccctggct 116
||||||||| ||| ||||||||||||||||||||||||||
Sbjct: 102 tctgttttgtctctacccatgcactgcctcttccctggct 141
>54892_vvi-miR408:pmrd
Length = 107
Score = 61.9 bits (31), Expect = 1e-10
Identities = 37/39 (94%)
Strand = Plus / Plus
Query: 78 ctgttttggctccacccatgcactgcctcttccctggct 116
||||||| |||| ||||||||||||||||||||||||||
Sbjct: 60 ctgtttttgctctacccatgcactgcctcttccctggct 98
>51347_ppe-miR408:pmrd
Length = 105
Score = 54.0 bits (27), Expect = 3e-08
Identities = 36/39 (92%)
Strand = Plus / Plus
Query: 78 ctgttttggctccacccatgcactgcctcttccctggct 116
||||| |||||| || |||||||||||||||||||||||
Sbjct: 58 ctgttgtggctctactcatgcactgcctcttccctggct 96
>54649_sof-miR408d:pmrd
Length = 215
Score = 50.1 bits (25), Expect = 5e-07
Identities = 28/29 (96%)
Strand = Plus / Plus
Query: 88 tccacccatgcactgcctcttccctggct 116
||||||| |||||||||||||||||||||
Sbjct: 169 tccacccctgcactgcctcttccctggct 197
>51397_ppt-miR408b:pmrd
Length = 144
Score = 48.1 bits (24), Expect = 2e-06
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 94 catgcactgcctcttccctggctt 117
||||||||||||||||||||||||
Sbjct: 92 catgcactgcctcttccctggctt 115
>46892_aqc-miR408:pmrd
Length = 87
Score = 48.1 bits (24), Expect = 2e-06
Identities = 24/24 (100%)
Strand = Plus / Minus
Query: 93 ccatgcactgcctcttccctggct 116
||||||||||||||||||||||||
Sbjct: 24 ccatgcactgcctcttccctggct 1
>54585_smo-miR408:pmrd
Length = 109
Score = 44.1 bits (22), Expect = 3e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 95 atgcactgcctcttccctggct 116
||||||||||||||||||||||
Sbjct: 76 atgcactgcctcttccctggct 97
>51566_pta-miR408:pmrd
Length = 86
Score = 44.1 bits (22), Expect = 3e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 95 atgcactgcctcttccctggct 116
||||||||||||||||||||||
Sbjct: 64 atgcactgcctcttccctggct 85
>48317_bdi-miR408:pmrd
Length = 133
Score = 44.1 bits (22), Expect = 3e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 93 ccatgcactgcctcttccctgg 114
||||||||||||||||||||||
Sbjct: 67 ccatgcactgcctcttccctgg 88
>55104_zma-miR408:pmrd
Length = 191
Score = 42.1 bits (21), Expect = 1e-04
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 96 tgcactgcctcttccctggct 116
|||||||||||||||||||||
Sbjct: 153 tgcactgcctcttccctggct 173
>54690_tae-miR408:pmrd
Length = 187
Score = 42.1 bits (21), Expect = 1e-04
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 96 tgcactgcctcttccctggct 116
|||||||||||||||||||||
Sbjct: 137 tgcactgcctcttccctggct 157
>54648_sof-miR408c:pmrd
Length = 286
Score = 42.1 bits (21), Expect = 1e-04
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 96 tgcactgcctcttccctggct 116
|||||||||||||||||||||
Sbjct: 248 tgcactgcctcttccctggct 268
>54647_sof-miR408b:pmrd
Length = 286
Score = 42.1 bits (21), Expect = 1e-04
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 96 tgcactgcctcttccctggct 116
|||||||||||||||||||||
Sbjct: 248 tgcactgcctcttccctggct 268
>54646_sof-miR408a:pmrd
Length = 283
Score = 42.1 bits (21), Expect = 1e-04
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 96 tgcactgcctcttccctggct 116
|||||||||||||||||||||
Sbjct: 245 tgcactgcctcttccctggct 265
>54499_sbi-miR408:pmrd
Length = 205
Score = 42.1 bits (21), Expect = 1e-04
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 96 tgcactgcctcttccctggct 116
|||||||||||||||||||||
Sbjct: 185 tgcactgcctcttccctggct 205
>48975_osa-miR408:pmrd
Length = 213
Score = 42.1 bits (21), Expect = 1e-04
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 96 tgcactgcctcttccctggct 116
|||||||||||||||||||||
Sbjct: 154 tgcactgcctcttccctggct 174
>48584_gma-miR408a:pmrd
Length = 120
Score = 40.1 bits (20), Expect = 4e-04
Identities = 35/40 (87%)
Strand = Plus / Plus
Query: 76 atctgttttggctccacccatgcactgcctcttccctggc 115
||||||| ||||| | | |||||||||||| |||||||||
Sbjct: 81 atctgttgtggctacgctcatgcactgcctgttccctggc 120
