miRNEST 2.0, an integrative microRNA resource :: BLAST
BLASTN 2.2.20 [Feb-08-2009]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
>RF00906;MIR1122;AP003211.3/16612-16773 39947:Oryza sativa Japonica
Group
Length = 162
Score = 170 bits (86), Expect = 4e-42
Identities = 137/154 (88%)
Strand = Plus / Plus
Query: 7 tactccctccagttcacaatttaagtcagtgtggcatttcccacattcatattgaagtta 66
|||||||||| |||||||| ||||||| | | ||||| |||||||||||||||| ||||
Sbjct: 5 tactccctccgtttcacaatgtaagtcattatagcattacccacattcatattgatgtta 64
Query: 67 atgaatgtagacatatatatgtatgtagattcattaacatcaatatgaatgtggagaatg 126
|||||| ||||||||||||| ||| ||||||||||||||| ||||||||||||| ||||
Sbjct: 65 atgaatctagacatatatatctatctagattcattaacattaatatgaatgtgggaaatg 124
Query: 127 ctgaaatgacttacattgtgaaatggaggaagta 160
|| |||||||||| ||||||||| ||||||||||
Sbjct: 125 ctaaaatgacttatattgtgaaacggaggaagta 158
Score = 139 bits (70), Expect = 1e-32
Identities = 124/142 (87%)
Strand = Plus / Minus
Query: 19 ttcacaatttaagtcagtgtggcatttcccacattcatattgaagttaatgaatgtagac 78
|||||||| ||||||| | | |||||||||||||||||||| | |||||||||| ||||
Sbjct: 146 ttcacaatataagtcattttagcatttcccacattcatattaatgttaatgaatctagat 87
Query: 79 atatatatgtatgtagattcattaacatcaatatgaatgtggagaatgctgaaatgactt 138
| |||||| | | ||||||||||||||||||||||||||||| |||||| ||||||||
Sbjct: 86 agatatatatgtctagattcattaacatcaatatgaatgtgggtaatgctataatgactt 27
Query: 139 acattgtgaaatggaggaagta 160
||||||||||| ||||| ||||
Sbjct: 26 acattgtgaaacggagggagta 5
>RF00906;MIR1122;AP003303.4/1543-1382 39947:Oryza sativa Japonica
Group
Length = 162
Score = 170 bits (86), Expect = 4e-42
Identities = 137/154 (88%)
Strand = Plus / Minus
Query: 7 tactccctccagttcacaatttaagtcagtgtggcatttcccacattcatattgaagtta 66
|||||||||| |||||||| ||||||| | | | ||||||||||||||||||| ||||
Sbjct: 158 tactccctccgtttcacaatgtaagtcattctagtatttcccacattcatattgttgtta 99
Query: 67 atgaatgtagacatatatatgtatgtagattcattaacatcaatatgaatgtggagaatg 126
|||||| ||||||||||||| ||| |||||||||||||||||||||| ||||||| ||||
Sbjct: 98 atgaatctagacatatatatctatctagattcattaacatcaatatggatgtggaaaatg 39
Query: 127 ctgaaatgacttacattgtgaaatggaggaagta 160
|| ||||||||||||||||||| ||||||||||
Sbjct: 38 ctagaatgacttacattgtgaaacggaggaagta 5
Score = 121 bits (61), Expect = 3e-27
Identities = 133/157 (84%)
Strand = Plus / Plus
Query: 5 tgtactccctccagttcacaatttaagtcagtgtggcatttcccacattcatattgaagt 64
|||||| ||||| |||||||| ||||||| | | |||||| |||||| |||||||| ||
Sbjct: 3 tgtacttcctccgtttcacaatgtaagtcattctagcattttccacatccatattgatgt 62
Query: 65 taatgaatgtagacatatatatgtatgtagattcattaacatcaatatgaatgtggagaa 124
|||||||| |||| | |||||| | | |||||||||||||| |||||||||||||| ||
Sbjct: 63 taatgaatctagatagatatatatgtctagattcattaacaacaatatgaatgtgggaaa 122
Query: 125 tgctgaaatgacttacattgtgaaatggaggaagtat 161
| || ||||||||||||||||||| ||||| |||||
Sbjct: 123 tactagaatgacttacattgtgaaacggagggagtat 159
>RF00906;MIR1122;AACV01003962.1/1704-1543 39947:Oryza sativa
Japonica Group
Length = 162
Score = 165 bits (83), Expect = 2e-40
Identities = 137/155 (88%)
Strand = Plus / Plus
Query: 6 gtactccctccagttcacaatttaagtcagtgtggcatttcccacattcatattgaagtt 65
||||||||||| |||||||| ||||||| | | |||||| ||| ||||||||||| |||
Sbjct: 4 gtactccctccgtttcacaatgtaagtcattctagcattttccatattcatattgatgtt 63
Query: 66 aatgaatgtagacatatatatgtatgtagattcattaacatcaatatgaatgtggagaat 125
||||||| || |||||||||| ||| ||||||||||||||||||||||||||||| |||
Sbjct: 64 aatgaatctatacatatatatttatctagattcattaacatcaatatgaatgtgggaaat 123
Query: 126 gctgaaatgacttacattgtgaaatggaggaagta 160
||| ||||||||||||||||||| ||||||||||
Sbjct: 124 gctagaatgacttacattgtgaaacggaggaagta 158
Score = 147 bits (74), Expect = 6e-35
Identities = 125/142 (88%)
Strand = Plus / Minus
Query: 19 ttcacaatttaagtcagtgtggcatttcccacattcatattgaagttaatgaatgtagac 78
|||||||| ||||||| | | |||||||||||||||||||||| |||||||||| ||||
Sbjct: 146 ttcacaatgtaagtcattctagcatttcccacattcatattgatgttaatgaatctagat 87
Query: 79 atatatatgtatgtagattcattaacatcaatatgaatgtggagaatgctgaaatgactt 138
| |||||| | | ||||||||||||||||||||||||| |||| |||||| ||||||||
Sbjct: 86 aaatatatatgtatagattcattaacatcaatatgaatatggaaaatgctagaatgactt 27
Query: 139 acattgtgaaatggaggaagta 160
||||||||||| ||||| ||||
Sbjct: 26 acattgtgaaacggagggagta 5
>RF00906;MIR1122;AY749345.1/542-381 40148:Oryza glumipatula
Length = 162
Score = 165 bits (83), Expect = 2e-40
Identities = 110/119 (92%)
Strand = Plus / Minus
Query: 42 atttcccacattcatattgaagttaatgaatgtagacatatatatgtatgtagattcatt 101
|||||||||||||||||||| |||||||||||||||||||||||| ||| ||||||||||
Sbjct: 123 atttcccacattcatattgatgttaatgaatgtagacatatatatctatctagattcatt 64
Query: 102 aacatcaatatgaatgtggagaatgctgaaatgacttacattgtgaaatggaggaagta 160
||||||||||||||||||| |||||| ||||||||||||||||||| ||||| ||||
Sbjct: 63 aacatcaatatgaatgtgggaaatgctagaatgacttacattgtgaaacggagggagta 5
Score = 139 bits (70), Expect = 1e-32
Identities = 133/154 (86%)
Strand = Plus / Plus
Query: 7 tactccctccagttcacaatttaagtcagtgtggcatttcccacattcatattgaagtta 66
|||||||||| |||||||| ||||||| | | |||||||||||||||||||||| ||||
Sbjct: 5 tactccctccgtttcacaatgtaagtcattctagcatttcccacattcatattgatgtta 64
Query: 67 atgaatgtagacatatatatgtatgtagattcattaacatcaatatgaatgtggagaatg 126
|||||| |||| | |||||| | | || |||||||||||||||||||||||||| |||
Sbjct: 65 atgaatctagatagatatatatgtctacattcattaacatcaatatgaatgtgggaaata 124
Query: 127 ctgaaatgacttacattgtgaaatggaggaagta 160
| ||||||||||||||||||| ||||||||||
Sbjct: 125 ttagaatgacttacattgtgaaacggaggaagta 158
>RF00906;MIR1122;AAAA02019037.1/4499-4338 39946:Oryza sativa Indica
Group
Length = 162
Score = 163 bits (82), Expect = 9e-40
Identities = 136/154 (88%)
Strand = Plus / Plus
Query: 7 tactccctccagttcacaatttaagtcagtgtggcatttcccacattcatattgaagtta 66
|||||||||| |||||||| ||||||| | | |||||||||||||||||| ||| ||||
Sbjct: 5 tactccctccgtttcacaatgtaagtcattctagcatttcccacattcatagtgatgtta 64
Query: 67 atgaatgtagacatatatatgtatgtagattcattaacatcaatatgaatgtggagaatg 126
|||||| ||||||||||||| ||| |||||||||||| ||||||||||||||||| ||||
Sbjct: 65 atgaatctagacatatatatctatttagattcattaatatcaatatgaatgtggaaaatg 124
Query: 127 ctgaaatgacttacattgtgaaatggaggaagta 160
| ||||||||||||||||||| ||||| ||||
Sbjct: 125 ttagaatgacttacattgtgaaacggagggagta 158
Score = 115 bits (58), Expect = 2e-25
Identities = 130/154 (84%)
Strand = Plus / Minus
Query: 7 tactccctccagttcacaatttaagtcagtgtggcatttcccacattcatattgaagtta 66
|||||||||| |||||||| ||||||| | | ||||| ||||||||||||||| |||
Sbjct: 158 tactccctccgtttcacaatgtaagtcattctaacattttccacattcatattgatatta 99
Query: 67 atgaatgtagacatatatatgtatgtagattcattaacatcaatatgaatgtggagaatg 126
|||||| || | | |||||| | | ||||||||||||||||| ||||||||||| ||||
Sbjct: 98 atgaatctaaatagatatatatgtctagattcattaacatcactatgaatgtgggaaatg 39
Query: 127 ctgaaatgacttacattgtgaaatggaggaagta 160
|| ||||||||||||||||||| ||||| ||||
Sbjct: 38 ctagaatgacttacattgtgaaacggagggagta 5
>RF00906;MIR1122;AP008212.1/28388180-28388020 39947:Oryza sativa
Japonica Group
Length = 161
Score = 157 bits (79), Expect = 6e-38
Identities = 137/155 (88%), Gaps = 1/155 (0%)
Strand = Plus / Minus
Query: 6 gtactccctccagttcacaatttaagtcagtgtggcatttcccacattcatattgaagtt 65
||||||||||| |||||||| ||||||| | | |||||||||||||||||||||| |||
Sbjct: 158 gtactccctccgtttcacaatgtaagtcattctagcatttcccacattcatattgatgtt 99
Query: 66 aatgaatgtagacatatatatgtatgtagattcattaacatcaatatgaatgtggagaat 125
||||||| || |||||| ||||| ||||||||||||||||||||||||||||| |||
Sbjct: 98 aatgaatctaaacatatgtatgtgc-tagattcattaacatcaatatgaatgtgggaaat 40
Query: 126 gctgaaatgacttacattgtgaaatggaggaagta 160
||| ||||||||||||||||||| ||||||||||
Sbjct: 39 gctagaatgacttacattgtgaaacggaggaagta 5
Score = 135 bits (68), Expect = 2e-31
Identities = 126/143 (88%), Gaps = 3/143 (2%)
Strand = Plus / Plus
Query: 19 ttcacaatttaagtcagtgtggcatttcccacattcatattgaagttaatgaatgtag-a 77
|||||||| ||||||| | | |||||||||||||||||||||| |||||||||| ||| |
Sbjct: 17 ttcacaatgtaagtcattctagcatttcccacattcatattgatgttaatgaatctagca 76
Query: 78 catatatatgtatgtagattcattaacatcaatatgaatgtggagaatgctgaaatgact 137
|||| |||||| | |||||||||||||||||||||||||||| |||||| |||||||
Sbjct: 77 catacatatgttt--agattcattaacatcaatatgaatgtgggaaatgctagaatgact 134
Query: 138 tacattgtgaaatggaggaagta 160
|||||||||||| ||||| ||||
Sbjct: 135 tacattgtgaaacggagggagta 157
>RF00906;MIR1122;AP005467.3/75230-75071 39947:Oryza sativa Japonica
Group
Length = 160
Score = 155 bits (78), Expect = 2e-37
Identities = 138/157 (87%), Gaps = 2/157 (1%)
Strand = Plus / Minus
Query: 5 tgtactccctccagttcacaatttaagtcagtgtggcatttcccacattcatattgaagt 64
|||||||||||| | |||||| ||||||| | | |||||||||||||||||||||| ||
Sbjct: 158 tgtactccctccgttccacaatgtaagtcattctagcatttcccacattcatattgatgt 99
Query: 65 taatgaatgtagacatatatatgtatgtagattcattaacatcaatatgaatgtggagaa 124
|||||||| |||||||||||||| | || |||||||||||||||||||||||| || ||
Sbjct: 98 taatgaatctagacatatatatg--tctacattcattaacatcaatatgaatgtagaaaa 41
Query: 125 tgctgaaatgacttacattgtgaaatggaggaagtat 161
|||| |||||||||||||||| || |||||||||||
Sbjct: 40 tgctagaatgacttacattgtggaacggaggaagtat 4
Score = 137 bits (69), Expect = 5e-32
Identities = 123/140 (87%), Gaps = 2/140 (1%)
Strand = Plus / Plus
Query: 21 cacaatttaagtcagtgtggcatttcccacattcatattgaagttaatgaatgtagacat 80
|||||| ||||||| | | |||||| | ||||||||||||| ||||||||||||||||||
Sbjct: 19 cacaatgtaagtcattctagcattttctacattcatattgatgttaatgaatgtagacat 78
Query: 81 atatatgtatgtagattcattaacatcaatatgaatgtggagaatgctgaaatgacttac 140
|||||||| | |||||||||||||||||||||||||||| |||||| ||||||||||
Sbjct: 79 atatatgtct--agattcattaacatcaatatgaatgtgggaaatgctagaatgacttac 136
Query: 141 attgtgaaatggaggaagta 160
|||||| || ||||| ||||
Sbjct: 137 attgtggaacggagggagta 156
>RF00906;MIR1122;AP005295.3/50213-50374 39947:Oryza sativa Japonica
Group
Length = 162
Score = 155 bits (78), Expect = 2e-37
Identities = 135/154 (87%)
Strand = Plus / Minus
Query: 7 tactccctccagttcacaatttaagtcagtgtggcatttcccacattcatattgaagtta 66
|||||||||| |||||||| ||||||| | | ||||| ||||||||||||| | ||||
Sbjct: 158 tactccctccgtttcacaatgtaagtcattctagcattctccacattcatattaatgtta 99
Query: 67 atgaatgtagacatatatatgtatgtagattcattaacatcaatatgaatgtggagaatg 126
|||||| ||||||||||||| ||| |||||||||||||| ||||||||||||| ||||
Sbjct: 98 atgaatctagacatatatatctatctagattcattaacactaatatgaatgtgggaaatg 39
Query: 127 ctgaaatgacttacattgtgaaatggaggaagta 160
|| |||||||||||||||||||| ||||||||||
Sbjct: 38 ctaaaatgacttacattgtgaaacggaggaagta 5
Score = 141 bits (71), Expect = 3e-33
Identities = 134/155 (86%)
Strand = Plus / Plus
Query: 6 gtactccctccagttcacaatttaagtcagtgtggcatttcccacattcatattgaagtt 65
||||| ||||| |||||||| ||||||| | | |||||||||||||||||||| |||
Sbjct: 4 gtacttcctccgtttcacaatgtaagtcattttagcatttcccacattcatattagtgtt 63
Query: 66 aatgaatgtagacatatatatgtatgtagattcattaacatcaatatgaatgtggagaat 125
||||||| |||| | |||||| | | ||||||||||||||| ||||||||||||||||||
Sbjct: 64 aatgaatctagatagatatatatgtctagattcattaacattaatatgaatgtggagaat 123
Query: 126 gctgaaatgacttacattgtgaaatggaggaagta 160
||| ||||||||||||||||||| ||||| ||||
Sbjct: 124 gctagaatgacttacattgtgaaacggagggagta 158
>RF00906;MIR1122;AP005879.3/69009-69170 39947:Oryza sativa Japonica
Group
Length = 162
Score = 153 bits (77), Expect = 9e-37
Identities = 137/157 (87%)
Strand = Plus / Minus
Query: 7 tactccctccagttcacaatttaagtcagtgtggcatttcccacattcatattgaagtta 66
|||||||||| |||||||| ||||||| | | |||||| | | ||||||||||| | ||
Sbjct: 158 tactccctccgtttcacaatataagtcattctagcattttctatattcatattgatgcta 99
Query: 67 atgaatgtagacatatatatgtatgtagattcattaacatcaatatgaatgtggagaatg 126
|||||| ||||||||||||| ||| |||| ||||||||||||||| ||||||||| ||||
Sbjct: 98 atgaatctagacatatatatctatctagagtcattaacatcaatacgaatgtggaaaatg 39
Query: 127 ctgaaatgacttacattgtgaaatggaggaagtatgt 163
|| ||||||||||||||||||| |||||||||||||
Sbjct: 38 ctagaatgacttacattgtgaaacggaggaagtatgt 2
Score = 99.6 bits (50), Expect = 1e-20
Identities = 119/142 (83%)
Strand = Plus / Plus
Query: 19 ttcacaatttaagtcagtgtggcatttcccacattcatattgaagttaatgaatgtagac 78
|||||||| ||||||| | | |||||| |||||||| |||||| |||||||| | ||||
Sbjct: 17 ttcacaatgtaagtcattctagcattttccacattcgtattgatgttaatgactctagat 76
Query: 79 atatatatgtatgtagattcattaacatcaatatgaatgtggagaatgctgaaatgactt 138
| |||||| | | ||||||||||| ||||||||||||| | || |||||| ||||||||
Sbjct: 77 agatatatatgtctagattcattagcatcaatatgaatatagaaaatgctagaatgactt 136
Query: 139 acattgtgaaatggaggaagta 160
| ||||||||| ||||| ||||
Sbjct: 137 atattgtgaaacggagggagta 158
>RF00906;MIR1122;AC111015.2/7663-7824 39947:Oryza sativa Japonica
Group
Length = 162
Score = 151 bits (76), Expect = 4e-36
Identities = 136/156 (87%)
Strand = Plus / Minus
Query: 5 tgtactccctccagttcacaatttaagtcagtgtggcatttcccacattcatattgaagt 64
|||||||||||| |||||||| ||||||| | | |||||||||||||||||||||| |
Sbjct: 160 tgtactccctccgtttcacaatataagtcattctagcatttcccacattcatattgatat 101
Query: 65 taatgaatgtagacatatatatgtatgtagattcattaacatcaatatgaatgtggagaa 124
|||||||| |||| |||||||| ||| ||||||||||||||| |||||||||||||| ||
Sbjct: 100 taatgaatctagatatatatatttatctagattcattaacattaatatgaatgtggaaaa 41
Query: 125 tgctgaaatgacttacattgtgaaatggaggaagta 160
| | ||||||||| ||||||||| ||||||||||
Sbjct: 40 agttagaatgacttatattgtgaaacggaggaagta 5
Score = 107 bits (54), Expect = 5e-23
Identities = 99/114 (86%)
Strand = Plus / Plus
Query: 47 ccacattcatattgaagttaatgaatgtagacatatatatgtatgtagattcattaacat 106
||||||||||||| | |||||||||| |||| | |||||| ||| |||||||||||| ||
Sbjct: 45 ccacattcatattaatgttaatgaatctagataaatatatatatctagattcattaatat 104
Query: 107 caatatgaatgtggagaatgctgaaatgacttacattgtgaaatggaggaagta 160
|||||||||||||| |||||| ||||||||| ||||||||| ||||| ||||
Sbjct: 105 caatatgaatgtgggaaatgctagaatgacttatattgtgaaacggagggagta 158
>RF00906;MIR1122;AP003770.3/99658-99497 39947:Oryza sativa Japonica
Group
Length = 162
Score = 151 bits (76), Expect = 4e-36
Identities = 136/156 (87%)
Strand = Plus / Plus
Query: 5 tgtactccctccagttcacaatttaagtcagtgtggcatttcccacattcatattgaagt 64
|||||| ||||| |||||||| ||||||| | | |||||||||||||| ||||||| ||
Sbjct: 3 tgtacttcctccgtttcacaatgtaagtcatttttgcatttcccacatttatattgatgt 62
Query: 65 taatgaatgtagacatatatatgtatgtagattcattaacatcaatatgaatgtggagaa 124
|||||||| ||||||||||||| ||| |||||||||||| |||||||||||||||| ||
Sbjct: 63 taatgaatctagacatatatatctatctagattcattaatatcaatatgaatgtgggaaa 122
Query: 125 tgctgaaatgacttacattgtgaaatggaggaagta 160
|||| ||||||||||||||||| | ||||| ||||
Sbjct: 123 tgctagaatgacttacattgtgatacggagggagta 158
Score = 139 bits (70), Expect = 1e-32
Identities = 133/154 (86%)
Strand = Plus / Minus
Query: 7 tactccctccagttcacaatttaagtcagtgtggcatttcccacattcatattgaagtta 66
|||||||||| ||||||| ||||||| | | |||||||||||||||||||||| |||
Sbjct: 158 tactccctccgtatcacaatgtaagtcattctagcatttcccacattcatattgatatta 99
Query: 67 atgaatgtagacatatatatgtatgtagattcattaacatcaatatgaatgtggagaatg 126
|||||| |||| | |||||| | | ||||||||||||||||||||| ||||||| ||||
Sbjct: 98 atgaatctagatagatatatatgtctagattcattaacatcaatataaatgtgggaaatg 39
Query: 127 ctgaaatgacttacattgtgaaatggaggaagta 160
| |||||||||||||||||||| ||||||||||
Sbjct: 38 caaaaatgacttacattgtgaaacggaggaagta 5
>RF00906;MIR1122;AC137070.2/83200-83361 39947:Oryza sativa Japonica
Group
Length = 162
Score = 151 bits (76), Expect = 4e-36
Identities = 112/124 (90%)
Strand = Plus / Minus
Query: 41 catttcccacattcatattgaagttaatgaatgtagacatatatatgtatgtagattcat 100
||||||||||||||||||||| | |||||||| ||||||||||||| ||| |||||||||
Sbjct: 124 catttcccacattcatattgatggtaatgaatctagacatatatatctatctagattcat 65
Query: 101 taacatcaatatgaatgtggagaatgctgaaatgacttacattgtgaaatggaggaagta 160
||||| |||||||||||||| |||||| ||||||||||||||||||| ||||| ||||
Sbjct: 64 taacaacaatatgaatgtgggaaatgctagaatgacttacattgtgaaacggagggagta 5
Query: 161 tgta 164
||||
Sbjct: 4 tgta 1
Score = 125 bits (63), Expect = 2e-28
Identities = 123/143 (86%)
Strand = Plus / Plus
Query: 7 tactccctccagttcacaatttaagtcagtgtggcatttcccacattcatattgaagtta 66
|||||||||| |||||||| ||||||| | | ||||||||||||||||||||| ||||
Sbjct: 5 tactccctccgtttcacaatgtaagtcattctagcatttcccacattcatattgttgtta 64
Query: 67 atgaatgtagacatatatatgtatgtagattcattaacatcaatatgaatgtggagaatg 126
|||||| |||| | |||||| | | ||||||||||| ||||||||||||||||| ||||
Sbjct: 65 atgaatctagatagatatatatgtctagattcattaccatcaatatgaatgtgggaaatg 124
Query: 127 ctgaaatgacttacattgtgaaa 149
|| ||||||||||||| |||||
Sbjct: 125 gtggaatgacttacattatgaaa 147
>RF00906;MIR1122;AP004132.3/69953-70114 39947:Oryza sativa Japonica
Group
Length = 162
Score = 151 bits (76), Expect = 4e-36
Identities = 136/156 (87%)
Strand = Plus / Minus
Query: 7 tactccctccagttcacaatttaagtcagtgtggcatttcccacattcatattgaagtta 66
|||||||||| |||||||| ||||||| | | |||||||||||||||||||||| ||||
Sbjct: 158 tactccctccgtttcacaatgtaagtcattctagcatttcccacattcatattgatgtta 99
Query: 67 atgaatgtagacatatatatgtatgtagattcattaacatcaatatgaatgtggagaatg 126
|||||| ||||||||||||| || || ||| ||||| || |||||||||||||| ||||
Sbjct: 98 atgaatctagacatatatatttagctaaatttattaatataaatatgaatgtggaaaatg 39
Query: 127 ctgaaatgacttacattgtgaaatggaggaagtatg 162
|| ||||||||||||||||||| ||||| ||||||
Sbjct: 38 ctataatgacttacattgtgaaacggagggagtatg 3
Score = 115 bits (58), Expect = 2e-25
Identities = 130/154 (84%)
Strand = Plus / Plus
Query: 7 tactccctccagttcacaatttaagtcagtgtggcatttcccacattcatattgaagtta 66
|||||||||| |||||||| ||||||| | | |||||| ||||||||||||| | |||
Sbjct: 5 tactccctccgtttcacaatgtaagtcattatagcattttccacattcatatttatatta 64
Query: 67 atgaatgtagacatatatatgtatgtagattcattaacatcaatatgaatgtggagaatg 126
|| ||| ||| | |||||| | | ||||||||||||||||||||||||||||| ||||
Sbjct: 65 ataaatttagctaaatatatatgtctagattcattaacatcaatatgaatgtgggaaatg 124
Query: 127 ctgaaatgacttacattgtgaaatggaggaagta 160
|| ||||||||||||||||||| ||||| ||||
Sbjct: 125 ctagaatgacttacattgtgaaacggagggagta 158
>RF00906;MIR1122;AACV01018570.1/9896-10057 39947:Oryza sativa
Japonica Group
Length = 162
Score = 149 bits (75), Expect = 1e-35
Identities = 135/155 (87%)
Strand = Plus / Plus
Query: 6 gtactccctccagttcacaatttaagtcagtgtggcatttcccacattcatattgaagtt 65
||||||||||| |||||||| ||||||| | | ||||||||||||||||||||| ||
Sbjct: 4 gtactccctccgtttcacaatgtaagtcattctaacatttcccacattcatattgatatt 63
Query: 66 aatgaatgtagacatatatatgtatgtagattcattaacatcaatatgaatgtggagaat 125
||||||| ||||||||||||| ||| |||||||||||| ||||||||||||||| | |||
Sbjct: 64 aatgaatctagacatatatatctatctagattcattaaaatcaatatgaatgtgaaaaat 123
Query: 126 gctgaaatgacttacattgtgaaatggaggaagta 160
|| ||||||||||||||||||| ||||| ||||
Sbjct: 124 actagaatgacttacattgtgaaacggagggagta 158
Score = 107 bits (54), Expect = 5e-23
Identities = 129/154 (83%)
Strand = Plus / Minus
Query: 7 tactccctccagttcacaatttaagtcagtgtggcatttcccacattcatattgaagtta 66
|||||||||| |||||||| ||||||| | | | |||| |||||||||||||| |||
Sbjct: 158 tactccctccgtttcacaatgtaagtcattctagtatttttcacattcatattgatttta 99
Query: 67 atgaatgtagacatatatatgtatgtagattcattaacatcaatatgaatgtggagaatg 126
|||||| |||| | |||||| | | |||||||||||| |||||||||||||||| ||||
Sbjct: 98 atgaatctagatagatatatatgtctagattcattaatatcaatatgaatgtgggaaatg 39
Query: 127 ctgaaatgacttacattgtgaaatggaggaagta 160
| ||||||||||||||||||| ||||| ||||
Sbjct: 38 ttagaatgacttacattgtgaaacggagggagta 5
>RF00906;MIR1122;AACV01021520.1/23851-23690 39947:Oryza sativa
Japonica Group
Length = 162
Score = 147 bits (74), Expect = 6e-35
Identities = 134/154 (87%)
Strand = Plus / Minus
Query: 7 tactccctccagttcacaatttaagtcagtgtggcatttcccacattcatattgaagtta 66
|||||||||| |||||||| ||||||| | | | |||||||||||| ||||||| | ||
Sbjct: 158 tactccctccgtttcacaatctaagtcattttagaatttcccacattaatattgatggta 99
Query: 67 atgaatgtagacatatatatgtatgtagattcattaacatcaatatgaatgtggagaatg 126
|||||| |||| |||||||| ||| ||||||||||||| ||||||||||||||| ||||
Sbjct: 98 atgaatctagaaatatatatctatctagattcattaacgtcaatatgaatgtgggaaatg 39
Query: 127 ctgaaatgacttacattgtgaaatggaggaagta 160
|| ||||||||||||||||||| ||||||||||
Sbjct: 38 ctagaatgacttacattgtgaaacggaggaagta 5
Score = 127 bits (64), Expect = 5e-29
Identities = 133/156 (85%)
Strand = Plus / Plus
Query: 5 tgtactccctccagttcacaatttaagtcagtgtggcatttcccacattcatattgaagt 64
|||||| ||||| |||||||| ||||||| | | |||||||||||||||||||||| ||
Sbjct: 3 tgtacttcctccgtttcacaatgtaagtcattctagcatttcccacattcatattgacgt 62
Query: 65 taatgaatgtagacatatatatgtatgtagattcattaacatcaatatgaatgtggagaa 124
|||||||| |||| | |||||| | | ||||||||||| ||||||||| ||||||| ||
Sbjct: 63 taatgaatctagatagatatatatttctagattcattaccatcaatattaatgtgggaaa 122
Query: 125 tgctgaaatgacttacattgtgaaatggaggaagta 160
| || |||||||||| ||||||||| ||||| ||||
Sbjct: 123 ttctaaaatgacttagattgtgaaacggagggagta 158
>RF00906;MIR1122;AAAA02019220.1/20048-19887 39946:Oryza sativa
Indica Group
Length = 162
Score = 147 bits (74), Expect = 6e-35
Identities = 134/154 (87%)
Strand = Plus / Plus
Query: 7 tactccctccagttcacaatttaagtcagtgtggcatttcccacattcatattgaagtta 66
|||||||||| ||||||| ||||||| | | |||||||||||||| ||||||| |||
Sbjct: 5 tactccctccgtttcacaaagtaagtcatttttgcatttcccacatttatattgatgttt 64
Query: 67 atgaatgtagacatatatatgtatgtagattcattaacatcaatatgaatgtggagaatg 126
|||||| ||||||||||| | ||| ||||||||||||||||||||| ||||||| ||||
Sbjct: 65 atgaatctagacatatatttctatctagattcattaacatcaatataaatgtgggaaatg 124
Query: 127 ctgaaatgacttacattgtgaaatggaggaagta 160
|| ||||||||||| |||||||| ||||||||||
Sbjct: 125 ctaaaatgacttactttgtgaaacggaggaagta 158
Score = 105 bits (53), Expect = 2e-22
Identities = 131/157 (83%)
Strand = Plus / Minus
Query: 5 tgtactccctccagttcacaatttaagtcagtgtggcatttcccacattcatattgaagt 64
|||||| ||||| ||||||| ||||||| | | |||||||||||||| ||||||| ||
Sbjct: 160 tgtacttcctccgtttcacaaagtaagtcattttagcatttcccacatttatattgatgt 101
Query: 65 taatgaatgtagacatatatatgtatgtagattcattaacatcaatatgaatgtggagaa 124
|||||||| |||| | | |||| | | ||||||||| ||||||||||| ||||||| ||
Sbjct: 100 taatgaatctagatagaaatatatgtctagattcataaacatcaatataaatgtgggaaa 41
Query: 125 tgctgaaatgacttacattgtgaaatggaggaagtat 161
||| ||||||||||| |||||||| ||||| |||||
Sbjct: 40 tgcaaaaatgacttactttgtgaaacggagggagtat 4
>RF00906;MIR1122;AC134344.2/22133-22294 39947:Oryza sativa Japonica
Group
Length = 162
Score = 139 bits (70), Expect = 1e-32
Identities = 136/158 (86%)
Strand = Plus / Plus
Query: 6 gtactccctccagttcacaatttaagtcagtgtggcatttcccacattcatattgaagtt 65
||||||||||| |||||||| ||||||| | | ||||||||||||||||||||| ||
Sbjct: 4 gtactccctccgtttcacaatgtaagtcattctatcatttcccacattcatattgatatt 63
Query: 66 aatgaatgtagacatatatatgtatgtagattcattaacatcaatatgaatgtggagaat 125
||||||| ||||||||||||| ||| ||||||||||||| ||||||||||| |||
Sbjct: 64 aatgaatctagacatatatatctatctagattcattaactaatatatgaatgtgagaaat 123
Query: 126 gctgaaatgacttacattgtgaaatggaggaagtatgt 163
||| ||||||||||||||||||| |||||||||||||
Sbjct: 124 gctagaatgacttacattgtgaaacggaggaagtatgt 161
Score = 107 bits (54), Expect = 5e-23
Identities = 120/142 (84%)
Strand = Plus / Minus
Query: 19 ttcacaatttaagtcagtgtggcatttcccacattcatattgaagttaatgaatgtagac 78
|||||||| ||||||| | | ||||||| ||||||||||| ||||||||||| ||||
Sbjct: 146 ttcacaatgtaagtcattctagcatttctcacattcatatattagttaatgaatctagat 87
Query: 79 atatatatgtatgtagattcattaacatcaatatgaatgtggagaatgctgaaatgactt 138
| |||||| | | |||||||||||| |||||||||||||||| |||| | ||||||||
Sbjct: 86 agatatatatgtctagattcattaatatcaatatgaatgtgggaaatgatagaatgactt 27
Query: 139 acattgtgaaatggaggaagta 160
||||||||||| ||||| ||||
Sbjct: 26 acattgtgaaacggagggagta 5
>RF00906;MIR1122;AACV01008600.1/18829-18668 39947:Oryza sativa
Japonica Group
Length = 162
Score = 139 bits (70), Expect = 1e-32
Identities = 133/154 (86%)
Strand = Plus / Plus
Query: 7 tactccctccagttcacaatttaagtcagtgtggcatttcccacattcatattgaagtta 66
|||||||||| |||||||| ||||||| | | |||||||||||||| |||||| ||||
Sbjct: 5 tactccctccgtttcacaatgtaagtcattctagcatttcccacatttatattggtgtta 64
Query: 67 atgaatgtagacatatatatgtatgtagattcattaacatcaatatgaatgtggagaatg 126
|||||| ||||||||||||| ||| |||||||||||| ||||||||||||||| | ||||
Sbjct: 65 atgaatctagacatatatatctatttagattcattaatatcaatatgaatgtgaaaaatg 124
Query: 127 ctgaaatgacttacattgtgaaatggaggaagta 160
|| ||||||||| |||||| || ||||| ||||
Sbjct: 125 ctagaatgacttatattgtggaacggagggagta 158
Score = 103 bits (52), Expect = 7e-22
Identities = 130/156 (83%)
Strand = Plus / Minus
Query: 5 tgtactccctccagttcacaatttaagtcagtgtggcatttcccacattcatattgaagt 64
|||||||||||| | |||||| ||||||| | | |||||| |||||||||||||| |
Sbjct: 160 tgtactccctccgttccacaatataagtcattctagcatttttcacattcatattgatat 101
Query: 65 taatgaatgtagacatatatatgtatgtagattcattaacatcaatatgaatgtggagaa 124
|||||||| || | | |||||| | | |||||||||||||| |||||| ||||||| ||
Sbjct: 100 taatgaatctaaatagatatatatgtctagattcattaacaccaatataaatgtgggaaa 41
Query: 125 tgctgaaatgacttacattgtgaaatggaggaagta 160
|||| ||||||||||||||||||| ||||| ||||
Sbjct: 40 tgctagaatgacttacattgtgaaacggagggagta 5
>RF00906;MIR1122;AAAA02016992.1/488-649 39946:Oryza sativa Indica
Group
Length = 162
Score = 139 bits (70), Expect = 1e-32
Identities = 133/154 (86%)
Strand = Plus / Minus
Query: 7 tactccctccagttcacaatttaagtcagtgtggcatttcccacattcatattgaagtta 66
|||||||||| |||||||| ||||||| | | ||||||| |||||||||||| | ||||
Sbjct: 158 tactccctccgtttcacaatgtaagtcattctagcatttctcacattcatattaatgtta 99
Query: 67 atgaatgtagacatatatatgtatgtagattcattaacatcaatatgaatgtggagaatg 126
|||||| ||||||||||||| | |||||||||||||||| |||||||| ||| ||||
Sbjct: 98 atgaatctagacatatatatccaactagattcattaacatccatatgaatatgggtaatg 39
Query: 127 ctgaaatgacttacattgtgaaatggaggaagta 160
|| ||||||||||||||||||| ||||||||||
Sbjct: 38 ctagaatgacttacattgtgaaacggaggaagta 5
Score = 93.7 bits (47), Expect = 7e-19
Identities = 128/155 (82%)
Strand = Plus / Plus
Query: 6 gtactccctccagttcacaatttaagtcagtgtggcatttcccacattcatattgaagtt 65
||||| ||||| |||||||| ||||||| | | ||||| |||| |||||||| || |||
Sbjct: 4 gtacttcctccgtttcacaatgtaagtcattctagcattacccatattcatatggatgtt 63
Query: 66 aatgaatgtagacatatatatgtatgtagattcattaacatcaatatgaatgtggagaat 125
||||||| ||| |||||| | | ||||||||||||||| |||||||||||| |||
Sbjct: 64 aatgaatctagttggatatatatgtctagattcattaacattaatatgaatgtgagaaat 123
Query: 126 gctgaaatgacttacattgtgaaatggaggaagta 160
||| ||||||||||||||||||| ||||| ||||
Sbjct: 124 gctagaatgacttacattgtgaaacggagggagta 158
>RF00906;MIR1122;AAAA02033049.1/305-466 39946:Oryza sativa Indica
Group
Length = 162
Score = 139 bits (70), Expect = 1e-32
Identities = 133/154 (86%)
Strand = Plus / Minus
Query: 7 tactccctccagttcacaatttaagtcagtgtggcatttcccacattcatattgaagtta 66
|||||||||| |||||||| ||||||| | | |||||| ||||||||||||||| ||||
Sbjct: 158 tactccctccgtttcacaatgtaagtcattctagcattttccacattcatattgatgtta 99
Query: 67 atgaatgtagacatatatatgtatgtagattcattaacatcaatatgaatgtggagaatg 126
|||||| ||||| ||||||| | ||||||||||| |||| ||||||||||||| ||||
Sbjct: 98 atgaatctagacttatatatatgcctagattcattagcatctatatgaatgtggacaatg 39
Query: 127 ctgaaatgacttacattgtgaaatggaggaagta 160
|| |||||| |||||||||||| ||||||||||
Sbjct: 38 ctagaatgacatacattgtgaaacggaggaagta 5
Score = 117 bits (59), Expect = 5e-26
Identities = 131/155 (84%)
Strand = Plus / Plus
Query: 6 gtactccctccagttcacaatttaagtcagtgtggcatttcccacattcatattgaagtt 65
||||| ||||| |||||||| || |||| | | ||||| |||||||||||| || | |
Sbjct: 4 gtacttcctccgtttcacaatgtatgtcattctagcattgtccacattcatatagatgct 63
Query: 66 aatgaatgtagacatatatatgtatgtagattcattaacatcaatatgaatgtggagaat 125
||||||| ||| ||||||||| | |||||||||||||||||||||||||||||| |||
Sbjct: 64 aatgaatctaggcatatatataagtctagattcattaacatcaatatgaatgtggaaaat 123
Query: 126 gctgaaatgacttacattgtgaaatggaggaagta 160
||| ||||||||||||||||||| ||||| ||||
Sbjct: 124 gctagaatgacttacattgtgaaacggagggagta 158
>RF00906;MIR1122;AP006533.3/146933-147094 39947:Oryza sativa
Japonica Group
Length = 162
Score = 139 bits (70), Expect = 1e-32
Identities = 133/154 (86%)
Strand = Plus / Minus
Query: 7 tactccctccagttcacaatttaagtcagtgtggcatttcccacattcatattgaagtta 66
|||||||||| |||||||| ||||||| | | |||| | || |||||||||||| ||||
Sbjct: 158 tactccctccgtttcacaatgtaagtcattctagcatattccgcattcatattgatgtta 99
Query: 67 atgaatgtagacatatatatgtatgtagattcattaacatcaatatgaatgtggagaatg 126
|||||| ||||||| ||||| ||| ||||||||||||||||||||||||| | | ||||
Sbjct: 98 atgaatatagacatctatatctatctagattcattaacatcaatatgaatataggaaatg 39
Query: 127 ctgaaatgacttacattgtgaaatggaggaagta 160
|| ||||||||||||||||||| ||||||||||
Sbjct: 38 ctagaatgacttacattgtgaaacggaggaagta 5
Score = 113 bits (57), Expect = 8e-25
Identities = 123/145 (84%)
Strand = Plus / Plus
Query: 19 ttcacaatttaagtcagtgtggcatttcccacattcatattgaagttaatgaatgtagac 78
|||||||| ||||||| | | |||||||| | ||||||||||| |||||||||| ||||
Sbjct: 17 ttcacaatgtaagtcattctagcatttcctatattcatattgatgttaatgaatctagat 76
Query: 79 atatatatgtatgtagattcattaacatcaatatgaatgtggagaatgctgaaatgactt 138
| ||||| | | || ||||||||||||||||||||||| ||| ||||| ||||||||
Sbjct: 77 agatatagatgtctatattcattaacatcaatatgaatgcggaatatgctagaatgactt 136
Query: 139 acattgtgaaatggaggaagtatgt 163
||||||||||| ||||| |||||||
Sbjct: 137 acattgtgaaacggagggagtatgt 161
>RF00906;MIR1122;AP008216.1/349835-349994 39947:Oryza sativa
Japonica Group
Length = 160
Score = 133 bits (67), Expect = 8e-31
Identities = 133/154 (86%), Gaps = 2/154 (1%)
Strand = Plus / Plus
Query: 7 tactccctccagttcacaatttaagtcagtgtggcatttcccacattcatattgaagtta 66
|||||||||| |||||||| ||||||| | |||||||||| ||||||||||| ||||
Sbjct: 5 tactccctccgtttcacaatgtaagtcattcaagcatttcccatattcatattgatgtta 64
Query: 67 atgaatgtagacatatatatgtatgtagattcattaacatcaatatgaatgtggagaatg 126
|||||| ||||||||||||| ||| |||||| |||||||||||||| |||||| ||||
Sbjct: 65 atgaatctagacatatatatctatatagatttattaacatcaatataaatgtg--aaatg 122
Query: 127 ctgaaatgacttacattgtgaaatggaggaagta 160
|| ||||||||||||||||||| ||||| ||||
Sbjct: 123 ctagaatgacttacattgtgaaacggagggagta 156
Score = 101 bits (51), Expect = 3e-21
Identities = 129/154 (83%), Gaps = 2/154 (1%)
Strand = Plus / Minus
Query: 7 tactccctccagttcacaatttaagtcagtgtggcatttcccacattcatattgaagtta 66
|||||||||| |||||||| ||||||| | | ||||||| ||||| ||||||| ||||
Sbjct: 156 tactccctccgtttcacaatgtaagtcattctagcatttc--acatttatattgatgtta 99
Query: 67 atgaatgtagacatatatatgtatgtagattcattaacatcaatatgaatgtggagaatg 126
|| ||| || | | |||||| | | ||||||||||||||||||||||||| ||| ||||
Sbjct: 98 ataaatctatatagatatatatgtctagattcattaacatcaatatgaatatgggaaatg 39
Query: 127 ctgaaatgacttacattgtgaaatggaggaagta 160
|| ||||||||||||||||||| ||||| ||||
Sbjct: 38 cttgaatgacttacattgtgaaacggagggagta 5
>RF00906;MIR1122;AAAA02028244.1/12095-12254 39946:Oryza sativa
Indica Group
Length = 160
Score = 133 bits (67), Expect = 8e-31
Identities = 124/142 (87%), Gaps = 2/142 (1%)
Strand = Plus / Plus
Query: 19 ttcacaatttaagtcagtgtggcatttcccacattcatattgaagttaatgaatgtagac 78
|||||||| ||||||| | |||||||||||||||||||| | | |||||||||| |||||
Sbjct: 17 ttcacaatataagtcattctggcatttcccacattcatactcatgttaatgaatttagac 76
Query: 79 atatatatgtatgtagattcattaacatcaatatgaatgtggagaatgctgaaatgactt 138
||||||| ||| ||||||||||||||| | |||||||||| | |||||| ||||||||
Sbjct: 77 atatata--tatctagattcattaacatgagtatgaatgtgaaaaatgctagaatgactt 134
Query: 139 acattgtgaaatggaggaagta 160
||||||||||| ||||| ||||
Sbjct: 135 acattgtgaaacggagggagta 156
Score = 103 bits (52), Expect = 7e-22
Identities = 133/159 (83%), Gaps = 2/159 (1%)
Strand = Plus / Minus
Query: 5 tgtactccctccagttcacaatttaagtcagtgtggcatttcccacattcatattgaagt 64
|||||||||||| |||||||| ||||||| | | |||||| |||||||||| | | ||
Sbjct: 158 tgtactccctccgtttcacaatgtaagtcattctagcatttttcacattcatactcatgt 99
Query: 65 taatgaatgtagacatatatatgtatgtagattcattaacatcaatatgaatgtggagaa 124
|||||||| |||| |||||||||| | | |||||||||||| | ||||||||||| ||
Sbjct: 98 taatgaatctagatatatatatgtct--aaattcattaacatgagtatgaatgtgggaaa 41
Query: 125 tgctgaaatgacttacattgtgaaatggaggaagtatgt 163
||| ||||||||| ||||||||| |||||||||||||
Sbjct: 40 tgccagaatgacttatattgtgaaacggaggaagtatgt 2
>RF00906;MIR1122;AC145127.1/349994-349835 39947:Oryza sativa
Japonica Group
Length = 160
Score = 133 bits (67), Expect = 8e-31
Identities = 133/154 (86%), Gaps = 2/154 (1%)
Strand = Plus / Minus
Query: 7 tactccctccagttcacaatttaagtcagtgtggcatttcccacattcatattgaagtta 66
|||||||||| |||||||| ||||||| | |||||||||| ||||||||||| ||||
Sbjct: 156 tactccctccgtttcacaatgtaagtcattcaagcatttcccatattcatattgatgtta 97
Query: 67 atgaatgtagacatatatatgtatgtagattcattaacatcaatatgaatgtggagaatg 126
|||||| ||||||||||||| ||| |||||| |||||||||||||| |||||| ||||
Sbjct: 96 atgaatctagacatatatatctatatagatttattaacatcaatataaatgtg--aaatg 39
Query: 127 ctgaaatgacttacattgtgaaatggaggaagta 160
|| ||||||||||||||||||| ||||| ||||
Sbjct: 38 ctagaatgacttacattgtgaaacggagggagta 5
Score = 101 bits (51), Expect = 3e-21
Identities = 129/154 (83%), Gaps = 2/154 (1%)
Strand = Plus / Plus
Query: 7 tactccctccagttcacaatttaagtcagtgtggcatttcccacattcatattgaagtta 66
|||||||||| |||||||| ||||||| | | ||||||| ||||| ||||||| ||||
Sbjct: 5 tactccctccgtttcacaatgtaagtcattctagcatttc--acatttatattgatgtta 62
Query: 67 atgaatgtagacatatatatgtatgtagattcattaacatcaatatgaatgtggagaatg 126
|| ||| || | | |||||| | | ||||||||||||||||||||||||| ||| ||||
Sbjct: 63 ataaatctatatagatatatatgtctagattcattaacatcaatatgaatatgggaaatg 122
Query: 127 ctgaaatgacttacattgtgaaatggaggaagta 160
|| ||||||||||||||||||| ||||| ||||
Sbjct: 123 cttgaatgacttacattgtgaaacggagggagta 156
>RF00906;MIR1122;AACV01009613.1/23372-23263 39947:Oryza sativa
Japonica Group
Length = 110
Score = 133 bits (67), Expect = 8e-31
Identities = 91/99 (91%)
Strand = Plus / Plus
Query: 40 gcatttcccacattcatattgaagttaatgaatgtagacatatatatgtatgtagattca 99
|||||||||||||||||||||| |||||||||| ||||||||||||| ||| ||||||||
Sbjct: 12 gcatttcccacattcatattgatgttaatgaatctagacatatatatctatttagattca 71
Query: 100 ttaacatcaatatgaatgtggagaatgctgaaatgactt 138
||||||||||||||||||||| |||||| ||||||||
Sbjct: 72 ttaacatcaatatgaatgtgggaaatgctagaatgactt 110
Score = 101 bits (51), Expect = 3e-21
Identities = 87/99 (87%)
Strand = Plus / Minus
Query: 40 gcatttcccacattcatattgaagttaatgaatgtagacatatatatgtatgtagattca 99
|||||||||||||||||||||| |||||||||| || | | |||||| | | ||||||||
Sbjct: 99 gcatttcccacattcatattgatgttaatgaatctaaatagatatatatgtctagattca 40
Query: 100 ttaacatcaatatgaatgtggagaatgctgaaatgactt 138
||||||||||||||||||||| |||||| ||||||||
Sbjct: 39 ttaacatcaatatgaatgtgggaaatgctagaatgactt 1
>RF00906;MIR1122;AAAA02010835.1/20211-20372 39946:Oryza sativa
Indica Group
Length = 162
Score = 131 bits (66), Expect = 3e-30
Identities = 132/154 (85%)
Strand = Plus / Minus
Query: 7 tactccctccagttcacaatttaagtcagtgtggcatttcccacattcatattgaagtta 66
|||||||||| |||||||| ||||||| | | ||||| ||||||||||||||| | ||
Sbjct: 158 tactccctccgtttcacaatgtaagtcattctaacatttaccacattcatattgatgcta 99
Query: 67 atgaatgtagacatatatatgtatgtagattcattaacatcaatatgaatgtggagaatg 126
|||||| ||||||||||||| ||| ||||||||||| ||||||||||||||| ||||
Sbjct: 98 atgaatctagacatatatatctatctagattcattagtatcaatatgaatgtgagaaatg 39
Query: 127 ctgaaatgacttacattgtgaaatggaggaagta 160
|| ||||||||| ||||||||| ||||||||||
Sbjct: 38 ctagaatgacttatattgtgaaacggaggaagta 5
Score = 109 bits (55), Expect = 1e-23
Identities = 130/155 (83%)
Strand = Plus / Plus
Query: 6 gtactccctccagttcacaatttaagtcagtgtggcatttcccacattcatattgaagtt 65
||||| ||||| |||||||| ||||||| | | ||||||| |||||||||||||| |
Sbjct: 4 gtacttcctccgtttcacaatataagtcattctagcatttctcacattcatattgatact 63
Query: 66 aatgaatgtagacatatatatgtatgtagattcattaacatcaatatgaatgtggagaat 125
||||||| |||| | |||||| | | ||||||||||| ||||||||||||||||| |||
Sbjct: 64 aatgaatctagatagatatatatgtctagattcattagcatcaatatgaatgtggtaaat 123
Query: 126 gctgaaatgacttacattgtgaaatggaggaagta 160
| | ||||||||||||||||||| ||||| ||||
Sbjct: 124 gttagaatgacttacattgtgaaacggagggagta 158
>RF00906;MIR1122;AC082645.13/91702-91541 4530:Oryza sativa (rice)
Length = 162
Score = 131 bits (66), Expect = 3e-30
Identities = 132/154 (85%)
Strand = Plus / Minus
Query: 7 tactccctccagttcacaatttaagtcagtgtggcatttcccacattcatattgaagtta 66
|||||||||| |||||||| |||| || | | |||||| |||||| ||||||| | ||
Sbjct: 158 tactccctccgtttcacaatataagccattctagcatttttcacatttatattgatgata 99
Query: 67 atgaatgtagacatatatatgtatgtagattcattaacatcaatatgaatgtggagaatg 126
|||||| ||||||||||||| ||| ||||||||||||||| ||||||||||||| ||||
Sbjct: 98 atgaatctagacatatatatctatctagattcattaacataaatatgaatgtgggaaatg 39
Query: 127 ctgaaatgacttacattgtgaaatggaggaagta 160
|| ||||||||| ||||||||| ||||||||||
Sbjct: 38 ctacaatgacttatattgtgaaacggaggaagta 5
Score = 117 bits (59), Expect = 5e-26
Identities = 122/143 (85%)
Strand = Plus / Plus
Query: 19 ttcacaatttaagtcagtgtggcatttcccacattcatattgaagttaatgaatgtagac 78
|||||||| ||||||| ||| |||||||||||||||||||| | |||||||||| ||||
Sbjct: 17 ttcacaatataagtcattgtagcatttcccacattcatatttatgttaatgaatctagat 76
Query: 79 atatatatgtatgtagattcattaacatcaatatgaatgtggagaatgctgaaatgactt 138
| |||||| | | ||||||||||| ||||||||| |||||| | |||||| |||| |||
Sbjct: 77 agatatatatgtctagattcattatcatcaatataaatgtgaaaaatgctagaatggctt 136
Query: 139 acattgtgaaatggaggaagtat 161
| ||||||||| ||||| |||||
Sbjct: 137 atattgtgaaacggagggagtat 159
>RF00906;MIR1122;AP004224.3/123495-123660 39947:Oryza sativa
Japonica Group
Length = 166
Score = 129 bits (65), Expect = 1e-29
Identities = 135/158 (85%), Gaps = 4/158 (2%)
Strand = Plus / Minus
Query: 7 tactccctccagttcacaatttaagtcagtgtggcatttcccacattcatattgaagtta 66
|||||||||| |||||||| ||||||| | | |||||||||||||||||| ||| ||||
Sbjct: 162 tactccctccgtttcacaatgtaagtcattctagcatttcccacattcatagtgatgtta 103
Query: 67 atgaatgtagacatatatatgtatgtagattcattaacatca----atatgaatgtggag 122
|||||| ||||||||||||| ||| ||||||||||||||||| ||||||| ||
Sbjct: 102 atgaatctagacatatatatctatctagattcattaacatcactatgtatgaatatgcga 43
Query: 123 aatgctgaaatgacttacattgtgaaatggaggaagta 160
|||||| ||||||||||||||||||| ||||||||||
Sbjct: 42 aatgctagaatgacttacattgtgaaacggaggaagta 5
Score = 93.7 bits (47), Expect = 7e-19
Identities = 92/107 (85%)
Strand = Plus / Plus
Query: 54 catattgaagttaatgaatgtagacatatatatgtatgtagattcattaacatcaatatg 113
|||| ||| |||||||||| |||| | |||||| | | ||||||||||||||||| ||||
Sbjct: 56 catagtgatgttaatgaatctagatagatatatatgtctagattcattaacatcactatg 115
Query: 114 aatgtggagaatgctgaaatgacttacattgtgaaatggaggaagta 160
||||||| |||||| ||||||||||||||||||| ||||| ||||
Sbjct: 116 aatgtgggaaatgctagaatgacttacattgtgaaacggagggagta 162
>RF00906;MIR1122;AL731582.2/110020-109911 39947:Oryza sativa
Japonica Group
Length = 110
Score = 127 bits (64), Expect = 5e-29
Identities = 76/80 (95%)
Strand = Plus / Minus
Query: 40 gcatttcccacattcatattgaagttaatgaatgtagacatatatatgtatgtagattca 99
|||||||||||||||||||||| |||||||||| ||||||||||||| ||| ||||||||
Sbjct: 99 gcatttcccacattcatattgatgttaatgaatctagacatatatatctatctagattca 40
Query: 100 ttaacatcaatatgaatgtg 119
||||||||||||||||||||
Sbjct: 39 ttaacatcaatatgaatgtg 20
Score = 101 bits (51), Expect = 3e-21
Identities = 87/99 (87%)
Strand = Plus / Plus
Query: 40 gcatttcccacattcatattgaagttaatgaatgtagacatatatatgtatgtagattca 99
||||||| |||||||||||||| |||||||||| |||| | |||||| | | ||||||||
Sbjct: 12 gcatttctcacattcatattgatgttaatgaatctagatagatatatatgtctagattca 71
Query: 100 ttaacatcaatatgaatgtggagaatgctgaaatgactt 138
||||||||||||||||||||| |||||| ||||||||
Sbjct: 72 ttaacatcaatatgaatgtgggaaatgctagaatgactt 110
>RF00906;MIR1122;CR855046.1/58437-58598 4530:Oryza sativa (rice)
Length = 162
Score = 127 bits (64), Expect = 5e-29
Identities = 133/156 (85%)
Strand = Plus / Plus
Query: 6 gtactccctccagttcacaatttaagtcagtgtggcatttcccacattcatattgaagtt 65
||||||||||| |||||| | ||||||| | | |||||| ||||||||||| || |||
Sbjct: 4 gtactccctccgtttcacattgtaagtcattttatcatttctcacattcatatagatgtt 63
Query: 66 aatgaatgtagacatatatatgtatgtagattcattaacatcaatatgaatgtggagaat 125
||||||| ||||||| ||||| ||| ||||||||| |||||| |||||||||||| |||
Sbjct: 64 aatgaatctagacatctatatatatttagattcatcaacatctatatgaatgtgggaaat 123
Query: 126 gctgaaatgacttacattgtgaaatggaggaagtat 161
||| ||||||||||||||||||| ||||| |||||
Sbjct: 124 gctagaatgacttacattgtgaaacggagggagtat 159
Score = 107 bits (54), Expect = 5e-23
Identities = 129/154 (83%)
Strand = Plus / Minus
Query: 7 tactccctccagttcacaatttaagtcagtgtggcatttcccacattcatattgaagtta 66
|||||||||| |||||||| ||||||| | | ||||||||||||||||||| || |||
Sbjct: 158 tactccctccgtttcacaatgtaagtcattctagcatttcccacattcatatagatgttg 99
Query: 67 atgaatgtagacatatatatgtatgtagattcattaacatcaatatgaatgtggagaatg 126
|||||| || | ||||||| | | |||||||||||||||| ||||||||||| ||||
Sbjct: 98 atgaatctaaatatatatagatgtctagattcattaacatctatatgaatgtgagaaatg 39
Query: 127 ctgaaatgacttacattgtgaaatggaggaagta 160
| |||||||||||| ||||||| ||||| ||||
Sbjct: 38 ataaaatgacttacaatgtgaaacggagggagta 5
>RF00906;MIR1122;CR855160.1/93205-93044 4530:Oryza sativa (rice)
Length = 162
Score = 125 bits (63), Expect = 2e-28
Identities = 132/155 (85%)
Strand = Plus / Minus
Query: 7 tactccctccagttcacaatttaagtcagtgtggcatttcccacattcatattgaagtta 66
|||||||||| |||||||| ||||||| | | ||||||| ||||| |||||||| | ||
Sbjct: 158 tactccctccgtttcacaatgtaagtcattttagcatttctcacatccatattgatgcta 99
Query: 67 atgaatgtagacatatatatgtatgtagattcattaacatcaatatgaatgtggagaatg 126
|||||| ||||||||||||| | |||||||||||| || | ||||||||||| ||||
Sbjct: 98 atgaatctagacatatatatccgtctagattcattaatataagtatgaatgtgggaaatg 39
Query: 127 ctgaaatgacttacattgtgaaatggaggaagtat 161
|| ||||||||||||||||||| |||||||||||
Sbjct: 38 ctagaatgacttacattgtgaaacggaggaagtat 4
Score = 107 bits (54), Expect = 5e-23
Identities = 120/142 (84%)
Strand = Plus / Plus
Query: 19 ttcacaatttaagtcagtgtggcatttcccacattcatattgaagttaatgaatgtagac 78
|||||||| ||||||| | | |||||||||||||||||| | | ||||||||| |||||
Sbjct: 17 ttcacaatgtaagtcattctagcatttcccacattcatacttatattaatgaatctagac 76
Query: 79 atatatatgtatgtagattcattaacatcaatatgaatgtggagaatgctgaaatgactt 138
|||||| | | ||||||||||| |||||||||| ||||| |||||| |||||||||
Sbjct: 77 ggatatatatgtctagattcattagcatcaatatggatgtgagaaatgctaaaatgactt 136
Query: 139 acattgtgaaatggaggaagta 160
||||||||||| ||||| ||||
Sbjct: 137 acattgtgaaacggagggagta 158
>RF00906;MIR1122;AC145396.3/45626-45471 39947:Oryza sativa Japonica
Group
Length = 156
Score = 125 bits (63), Expect = 2e-28
Identities = 131/154 (85%), Gaps = 6/154 (3%)
Strand = Plus / Minus
Query: 7 tactccctccagttcacaatttaagtcagtgtggcatttcccacattcatattgaagtta 66
|||||||||| |||||||| ||||||| | | |||||||| ||||||||||||| | ||
Sbjct: 152 tactccctccgtttcacaatataagtcattctagcatttcctacattcatattgatgcta 93
Query: 67 atgaatgtagacatatatatgtatgtagattcattaacatcaatatgaatgtggagaatg 126
|||||| ||||||||||| | |||||||||| ||||||||||||||||| ||||
Sbjct: 92 atgaatctagacatatatct------agattcattagcatcaatatgaatgtgggaaatg 39
Query: 127 ctgaaatgacttacattgtgaaatggaggaagta 160
|| ||||||||||||||||||| ||||||||||
Sbjct: 38 ctagaatgacttacattgtgaaacggaggaagta 5
Score = 95.6 bits (48), Expect = 2e-19
Identities = 130/156 (83%), Gaps = 6/156 (3%)
Strand = Plus / Plus
Query: 5 tgtactccctccagttcacaatttaagtcagtgtggcatttcccacattcatattgaagt 64
|||||| ||||| |||||||| ||||||| | | |||||||||||||||||||||| |
Sbjct: 3 tgtacttcctccgtttcacaatgtaagtcattctagcatttcccacattcatattgatgc 62
Query: 65 taatgaatgtagacatatatatgtatgtagattcattaacatcaatatgaatgtggagaa 124
|||||||| ||| ||||||| | ||||||||||| ||||||||||||||| | ||
Sbjct: 63 taatgaatctag----atatatg--tctagattcattagcatcaatatgaatgtaggaaa 116
Query: 125 tgctgaaatgacttacattgtgaaatggaggaagta 160
|||| ||||||||| ||||||||| ||||| ||||
Sbjct: 117 tgctagaatgacttatattgtgaaacggagggagta 152
>RF00906;MIR1122;AP005125.3/150901-150749 39947:Oryza sativa
Japonica Group
Length = 153
Score = 121 bits (61), Expect = 3e-27
Identities = 131/154 (85%), Gaps = 9/154 (5%)
Strand = Plus / Minus
Query: 7 tactccctccagttcacaatttaagtcagtgtggcatttcccacattcatattgaagtta 66
|||||||||| |||||||| ||||||| | | |||||||||||||||||||||| ||||
Sbjct: 149 tactccctccgtttcacaatgtaagtcattctagcatttcccacattcatattgatgtta 90
Query: 67 atgaatgtagacatatatatgtatgtagattcattaacatcaatatgaatgtggagaatg 126
|||||| |||| |||| | |||||||||||||||||||||||||||| ||||
Sbjct: 89 atgaatctaga-------atgtct--agattcattaacatcaatatgaatgtgggaaatg 39
Query: 127 ctgaaatgacttacattgtgaaatggaggaagta 160
|| ||||||||||||||||||| ||||||||||
Sbjct: 38 ctagaatgacttacattgtgaaacggaggaagta 5
Score = 115 bits (58), Expect = 2e-25
Identities = 120/142 (84%), Gaps = 9/142 (6%)
Strand = Plus / Plus
Query: 19 ttcacaatttaagtcagtgtggcatttcccacattcatattgaagttaatgaatgtagac 78
|||||||| ||||||| | | |||||||||||||||||||||| |||||||||| |||||
Sbjct: 17 ttcacaatgtaagtcattctagcatttcccacattcatattgatgttaatgaatctagac 76
Query: 79 atatatatgtatgtagattcattaacatcaatatgaatgtggagaatgctgaaatgactt 138
|| | ||||||||||||||||||||||||||||| |||||| ||||||||
Sbjct: 77 at---------tctagattcattaacatcaatatgaatgtgggaaatgctagaatgactt 127
Query: 139 acattgtgaaatggaggaagta 160
||||||||||| ||||| ||||
Sbjct: 128 acattgtgaaacggagggagta 149
>RF00906;MIR1122;AACV01013006.1/1091-1250 39947:Oryza sativa
Japonica Group
Length = 160
Score = 117 bits (59), Expect = 5e-26
Identities = 122/142 (85%), Gaps = 2/142 (1%)
Strand = Plus / Plus
Query: 19 ttcacaatttaagtcagtgtggcatttcccacattcatattgaagttaatgaatgtagac 78
|||||||| ||||||| | | ||||||||||||||||| | || |||||||||| ||||
Sbjct: 17 ttcacaatgtaagtcattttagcatttcccacattcatgtagatgttaatgaatcaagac 76
Query: 79 atatatatgtatgtagattcattaacatcaatatgaatgtggagaatgctgaaatgactt 138
||||||||| || ||||||||||||||| ||||||||||| | |||||| |||||||||
Sbjct: 77 atatatatgcat--agattcattaacatctatatgaatgtgaaaaatgctaaaatgactt 134
Query: 139 acattgtgaaatggaggaagta 160
|||| ||||| ||||| ||||
Sbjct: 135 gcattatgaaacggagggagta 156
Score = 103 bits (52), Expect = 7e-22
Identities = 130/155 (83%), Gaps = 2/155 (1%)
Strand = Plus / Minus
Query: 6 gtactccctccagttcacaatttaagtcagtgtggcatttcccacattcatattgaagtt 65
||||||||||| |||| ||| |||||| | | |||||| ||||||||||| || |||
Sbjct: 157 gtactccctccgtttcataatgcaagtcattttagcatttttcacattcatatagatgtt 98
Query: 66 aatgaatgtagacatatatatgtatgtagattcattaacatcaatatgaatgtggagaat 125
||||||| || ||||||||||| | |||||||||||||| | |||||||||| |||
Sbjct: 97 aatgaatctatgcatatatatgtctt--gattcattaacatctacatgaatgtgggaaat 40
Query: 126 gctgaaatgacttacattgtgaaatggaggaagta 160
||| |||||||||||||||||||| ||||||||||
Sbjct: 39 gctaaaatgacttacattgtgaaacggaggaagta 5
>RF00906;MIR1122;AAAA02032176.1/1934-1774 39946:Oryza sativa Indica
Group
Length = 161
Score = 117 bits (59), Expect = 5e-26
Identities = 132/155 (85%), Gaps = 1/155 (0%)
Strand = Plus / Minus
Query: 7 tactccctccagttcacaatttaagtcagtgtggcatttcccacattcatattgaagtta 66
|||||||||| |||||||| ||||||| | | |||| ||||||||||||||| ||||
Sbjct: 157 tactccctccgtttcacaatgtaagtcattctaatattttccacattcatattgatgtta 98
Query: 67 atgaatgtagacatatatatgtatgtagattcattaacatcaatatgaatgtggagaatg 126
|||||| ||||||||||||| ||| |||||||||||| |||||||||||||||| |||
Sbjct: 97 atgaatctagacatatatatctatctagattcattaatatcaatatgaatgtgg-gaaaa 39
Query: 127 ctgaaatgacttacattgtgaaatggaggaagtat 161
|| ||| ||||||||||| ||| ||||| |||||
Sbjct: 38 ctagaataacttacattgtaaaacggagggagtat 4
Score = 117 bits (59), Expect = 5e-26
Identities = 104/119 (87%)
Strand = Plus / Plus
Query: 43 tttcccacattcatattgaagttaatgaatgtagacatatatatgtatgtagattcatta 102
||||||||||||||||||| ||||||||| |||| | |||||| | | |||||||||||
Sbjct: 40 tttcccacattcatattgatattaatgaatctagatagatatatatgtctagattcatta 99
Query: 103 acatcaatatgaatgtggagaatgctgaaatgacttacattgtgaaatggaggaagtat 161
||||||||||||||||||| ||| | ||||||||||||||||||| ||||| |||||
Sbjct: 100 acatcaatatgaatgtggaaaatattagaatgacttacattgtgaaacggagggagtat 158
>RF00906;MIR1122;AAAA02033830.1/7365-7526 39946:Oryza sativa Indica
Group
Length = 162
Score = 117 bits (59), Expect = 5e-26
Identities = 122/143 (85%)
Strand = Plus / Minus
Query: 7 tactccctccagttcacaatttaagtcagtgtggcatttcccacattcatattgaagtta 66
|||||||||| |||||||| ||||||| | | |||||| | | |||||| |||| |||
Sbjct: 158 tactccctccgtttcacaatgtaagtcattctagcattttctaaattcatgttgatatta 99
Query: 67 atgaatgtagacatatatatgtatgtagattcattaacatcaatatgaatgtggagaatg 126
|||||| ||||||||||||| ||| |||||||||||||||||||||||||||| ||||
Sbjct: 98 atgaatctagacatatatatctatctagattcattaacatcaatatgaatgtgagaaatg 39
Query: 127 ctgaaatgacttacattgtgaaa 149
| |||||||||||||||||||
Sbjct: 38 gtagaatgacttacattgtgaaa 16
Score = 111 bits (56), Expect = 3e-24
Identities = 131/156 (83%)
Strand = Plus / Plus
Query: 6 gtactccctccagttcacaatttaagtcagtgtggcatttcccacattcatattgaagtt 65
||||||| ||| |||||||| ||||||| | | |||||| |||||||||||||| |||
Sbjct: 4 gtactccttccgtttcacaatgtaagtcattctaccatttctcacattcatattgatgtt 63
Query: 66 aatgaatgtagacatatatatgtatgtagattcattaacatcaatatgaatgtggagaat 125
||||||| |||| | |||||| | | |||||||||||| ||||| |||||| | || |||
Sbjct: 64 aatgaatctagatagatatatatgtctagattcattaatatcaacatgaatttagaaaat 123
Query: 126 gctgaaatgacttacattgtgaaatggaggaagtat 161
||| ||||||||||||||||||| ||||| |||||
Sbjct: 124 gctagaatgacttacattgtgaaacggagggagtat 159
>RF00906;MIR1122;AP003999.3/94479-94320 39947:Oryza sativa Japonica
Group
Length = 160
Score = 115 bits (58), Expect = 2e-25
Identities = 133/157 (84%), Gaps = 2/157 (1%)
Strand = Plus / Plus
Query: 5 tgtactccctccagttcacaatttaagtcagtgtggcatttcccacattcatattgaagt 64
|||||||||||| |||||||| ||||||| | | |||||||||||||||||||||| ||
Sbjct: 3 tgtactccctccgtttcacaatgtaagtcattctagcatttcccacattcatattgatgt 62
Query: 65 taatgaatgtagacatatatatgtatgtagattcattaacatcaatatgaatgtggagaa 124
|||||||| |||| | ||||| | |||||||||||||||||||| || |||| ||
Sbjct: 63 taatgaatctagataggcatatg--tccagattcattaacatcaatataaacgtgggaaa 120
Query: 125 tgctgaaatgacttacattgtgaaatggaggaagtat 161
|||| ||||||||| ||||||||| |||||||||||
Sbjct: 121 tgctagaatgacttatattgtgaaacggaggaagtat 157
Score = 109 bits (55), Expect = 1e-23
Identities = 121/142 (85%), Gaps = 2/142 (1%)
Strand = Plus / Minus
Query: 19 ttcacaatttaagtcagtgtggcatttcccacattcatattgaagttaatgaatgtagac 78
|||||||| ||||||| | | ||||||||||| || ||||||| |||||||||| | |||
Sbjct: 144 ttcacaatataagtcattctagcatttcccacgtttatattgatgttaatgaatctggac 85
Query: 79 atatatatgtatgtagattcattaacatcaatatgaatgtggagaatgctgaaatgactt 138
|||| | || ||||||||||||||||||||||||||||| |||||| ||||||||
Sbjct: 84 atatgcct--atctagattcattaacatcaatatgaatgtgggaaatgctagaatgactt 27
Query: 139 acattgtgaaatggaggaagta 160
||||||||||| ||||| ||||
Sbjct: 26 acattgtgaaacggagggagta 5
>RF00906;MIR1122;AP008217.1/27688043-27688204 39947:Oryza sativa
Japonica Group
Length = 162
Score = 111 bits (56), Expect = 3e-24
Identities = 104/120 (86%)
Strand = Plus / Plus
Query: 41 catttcccacattcatattgaagttaatgaatgtagacatatatatgtatgtagattcat 100
|||||||||||||||||| | |||||||||| |||| ||||||| | | |||||||||
Sbjct: 39 catttcccacattcatataggtgttaatgaatctagatatatatagatgtctagattcat 98
Query: 101 taacatcaatatgaatgtggagaatgctgaaatgacttacattgtgaaatggaggaagta 160
||||| | ||||||||||||| |||||| ||||||||||||||||||| ||||| ||||
Sbjct: 99 taacacctatatgaatgtggaaaatgctagaatgacttacattgtgaaacggagggagta 158
Score = 105 bits (53), Expect = 2e-22
Identities = 116/137 (84%)
Strand = Plus / Minus
Query: 7 tactccctccagttcacaatttaagtcagtgtggcatttcccacattcatattgaagtta 66
|||||||||| |||||||| ||||||| | | |||||| |||||||||||| | ||||
Sbjct: 158 tactccctccgtttcacaatgtaagtcattctagcattttccacattcatataggtgtta 99
Query: 67 atgaatgtagacatatatatgtatgtagattcattaacatcaatatgaatgtggagaatg 126
|||||| ||||||| ||||| ||| |||||||||||||| | |||||||||||| ||||
Sbjct: 98 atgaatctagacatctatatatatctagattcattaacacctatatgaatgtgggaaatg 39
Query: 127 ctgaaatgacttacatt 143
| |||||||||||||
Sbjct: 38 ttagaatgacttacatt 22
>RF00906;MIR1122;AAAA02004628.1/54560-54721 39946:Oryza sativa
Indica Group
Length = 162
Score = 109 bits (55), Expect = 1e-23
Identities = 130/155 (83%)
Strand = Plus / Minus
Query: 7 tactccctccagttcacaatttaagtcagtgtggcatttcccacattcatattgaagtta 66
|||||||||| |||||||| ||||||| | | |||||| |||||||||||| || | ||
Sbjct: 158 tactccctccgtttcacaatgtaagtcattctagcattttccacattcatatagatgcta 99
Query: 67 atgaatgtagacatatatatgtatgtagattcattaacatcaatatgaatgtggagaatg 126
|||||| || ||||||||||| | ||||||||||| |||| |||||||| | || ||||
Sbjct: 98 atgaatttaaacatatatatgcgtatagattcattagcatctatatgaatatagaaaatg 39
Query: 127 ctgaaatgacttacattgtgaaatggaggaagtat 161
| ||||||||||||||||||| ||||| |||||
Sbjct: 38 ttagaatgacttacattgtgaaacggagggagtat 4
Score = 85.7 bits (43), Expect = 2e-16
Identities = 127/155 (81%)
Strand = Plus / Plus
Query: 7 tactccctccagttcacaatttaagtcagtgtggcatttcccacattcatattgaagtta 66
|||||||||| |||||||| ||||||| | | ||||| | | |||||||| || | ||
Sbjct: 5 tactccctccgtttcacaatgtaagtcattctaacattttctatattcatatagatgcta 64
Query: 67 atgaatgtagacatatatatgtatgtagattcattaacatcaatatgaatgtggagaatg 126
|||||| || || |||||| | | || |||||||| |||| ||||||||||||| ||||
Sbjct: 65 atgaatctatacgcatatatatgtttaaattcattagcatctatatgaatgtggaaaatg 124
Query: 127 ctgaaatgacttacattgtgaaatggaggaagtat 161
|| ||||||||||||||||||| ||||| |||||
Sbjct: 125 ctagaatgacttacattgtgaaacggagggagtat 159
>RF00906;MIR1122;AAAA02042348.1/276-116 39946:Oryza sativa Indica
Group
Length = 161
Score = 109 bits (55), Expect = 1e-23
Identities = 131/155 (84%), Gaps = 1/155 (0%)
Strand = Plus / Minus
Query: 7 tactccctccagttcacaatttaagtcagtgtggcatttcccacattcatattgaagtta 66
|||||||||| |||||||| ||||||| | | ||||||||| ||| ||||| | ||||
Sbjct: 157 tactccctccgtttcacaatgtaagtcattctaacatttcccatatttatattaatgtta 98
Query: 67 atgaatgtagacatatatatgtatgtagattcattaacatcaatatgaatgtggagaatg 126
|||||| |||| |||||| | ||| ||||||||||| |||||||||||||||| ||||
Sbjct: 97 atgaatctagatatatat-tctatctagattcattaccatcaatatgaatgtgagaaatg 39
Query: 127 ctgaaatgacttacattgtgaaatggaggaagtat 161
|| |||||||||||||| |||| |||||||||||
Sbjct: 38 ctagaatgacttacattgcgaaacggaggaagtat 4
Score = 83.8 bits (42), Expect = 7e-16
Identities = 115/138 (83%), Gaps = 1/138 (0%)
Strand = Plus / Plus
Query: 23 caatttaagtcagtgtggcatttcccacattcatattgaagttaatgaatgtagacatat 82
|||| ||||||| | | ||||||| |||||||||||||| | |||||||| |||| | |
Sbjct: 21 caatgtaagtcattctagcatttctcacattcatattgatggtaatgaatctagataga- 79
Query: 83 atatgtatgtagattcattaacatcaatatgaatgtggagaatgctgaaatgacttacat 142
|||| ||| ||||||||||||||| ||||| ||| ||| |||| | ||||||||||||
Sbjct: 80 atatatatctagattcattaacattaatataaatatgggaaatgttagaatgacttacat 139
Query: 143 tgtgaaatggaggaagta 160
||||||| ||||| ||||
Sbjct: 140 tgtgaaacggagggagta 157
>RF00906;MIR1122;AC123528.2/111745-111906 39947:Oryza sativa
Japonica Group
Length = 162
Score = 107 bits (54), Expect = 5e-23
Identities = 93/106 (87%)
Strand = Plus / Minus
Query: 7 tactccctccagttcacaatttaagtcagtgtggcatttcccacattcatattgaagtta 66
|||||||||| |||||||| |||| || | | | |||||||||||||||||||| |||
Sbjct: 158 tactccctccgtttcacaatgtaagacattctagtatttcccacattcatattgatatta 99
Query: 67 atgaatgtagacatatatatgtatgtagattcattaacatcaatat 112
|||||| ||||||||||||| ||| |||||||||||||||||||||
Sbjct: 98 atgaatctagacatatatatctatctagattcattaacatcaatat 53
Score = 85.7 bits (43), Expect = 2e-16
Identities = 91/107 (85%)
Strand = Plus / Plus
Query: 55 atattgaagttaatgaatgtagacatatatatgtatgtagattcattaacatcaatatga 114
||||||| |||||||||| |||| | |||||| | | |||||||||||| ||||||||||
Sbjct: 53 atattgatgttaatgaatctagatagatatatatgtctagattcattaatatcaatatga 112
Query: 115 atgtggagaatgctgaaatgacttacattgtgaaatggaggaagtat 161
|||||| ||| || |||| |||||||||||||| ||||| |||||
Sbjct: 113 atgtgggaaatactagaatgtcttacattgtgaaacggagggagtat 159
>RF00906;MIR1122;AP008214.1/4654552-4654403 39947:Oryza sativa
Japonica Group
Length = 150
Score = 105 bits (53), Expect = 2e-22
Identities = 118/142 (83%), Gaps = 12/142 (8%)
Strand = Plus / Minus
Query: 19 ttcacaatttaagtcagtgtggcatttcccacattcatattgaagttaatgaatgtagac 78
|||||||| ||||||| | | |||||||||||||||||||||| ||||||||| |||||
Sbjct: 134 ttcacaatgtaagtcattctagcatttcccacattcatattgatgttaatgaaactagac 75
Query: 79 atatatatgtatgtagattcattaacatcaatatgaatgtggagaatgctgaaatgactt 138
||| |||||||||||||||||||||||||||| |||||| ||||||||
Sbjct: 74 ata------------gattcattaacatcaatatgaatgtggaaaatgctagaatgactt 27
Query: 139 acattgtgaaatggaggaagta 160
||||| ||||| ||||||||||
Sbjct: 26 acattatgaaacggaggaagta 5
Score = 75.8 bits (38), Expect = 2e-13
Identities = 50/54 (92%)
Strand = Plus / Plus
Query: 96 ttcattaacatcaatatgaatgtggagaatgctgaaatgacttacattgtgaaa 149
||||||||||||||||||||||||| |||||| |||||||||||||||||||
Sbjct: 82 ttcattaacatcaatatgaatgtgggaaatgctagaatgacttacattgtgaaa 135
>RF00906;MIR1122;AAAA02004745.1/86622-86461 39946:Oryza sativa
Indica Group
Length = 162
Score = 105 bits (53), Expect = 2e-22
Identities = 128/153 (83%)
Strand = Plus / Minus
Query: 8 actccctccagttcacaatttaagtcagtgtggcatttcccacattcatattgaagttaa 67
||||||||| |||| ||| ||||||| | | ||||||||||||||||||| || ||||
Sbjct: 157 actccctccgtttcataatgtaagtcattctagcatttcccacattcatatggaggttag 98
Query: 68 tgaatgtagacatatatatgtatgtagattcattaacatcaatatgaatgtggagaatgc 127
||||| ||||||||||||| ||| |||||||| |||| || |||||||| | | |||||
Sbjct: 97 tgaatctagacatatatatctatatagattcactaacctctatatgaatataggaaatgc 38
Query: 128 tgaaatgacttacattgtgaaatggaggaagta 160
| ||||||||||||| ||||| ||||| ||||
Sbjct: 37 tagaatgacttacattatgaaacggagggagta 5
Score = 73.8 bits (37), Expect = 7e-13
Identities = 121/149 (81%)
Strand = Plus / Plus
Query: 7 tactccctccagttcacaatttaagtcagtgtggcatttcccacattcatattgaagtta 66
|||||||||| |||| ||| ||||||| | | |||||||| | |||||||| || ||||
Sbjct: 5 tactccctccgtttcataatgtaagtcattctagcatttcctatattcatatagaggtta 64
Query: 67 atgaatgtagacatatatatgtatgtagattcattaacatcaatatgaatgtggagaatg 126
||||| || | | |||||| | | |||||||| |||| || |||||||||||| ||||
Sbjct: 65 gtgaatctatatagatatatatgtctagattcactaacctccatatgaatgtgggaaatg 124
Query: 127 ctgaaatgacttacattgtgaaatggagg 155
|| ||||||||||||| ||||| |||||
Sbjct: 125 ctagaatgacttacattatgaaacggagg 153
>RF00906;MIR1122;AAAA02015039.1/73812-73973 39946:Oryza sativa
Indica Group
Length = 162
Score = 105 bits (53), Expect = 2e-22
Identities = 104/121 (85%)
Strand = Plus / Minus
Query: 40 gcatttcccacattcatattgaagttaatgaatgtagacatatatatgtatgtagattca 99
||||| ||||||||||||| || |||||||||| |||| |||||| ||| | ||||||||
Sbjct: 125 gcattgcccacattcatatagatgttaatgaatctagaaatatatgtgtgtctagattca 66
Query: 100 ttaacatcaatatgaatgtggagaatgctgaaatgacttacattgtgaaatggaggaagt 159
|||||||| ||||||||||| ||||||| ||| | |||||||| ||||| ||||| |||
Sbjct: 65 ttaacatctatatgaatgtgaggaatgctaaaaagtcttacattatgaaacggagggagt 6
Query: 160 a 160
|
Sbjct: 5 a 5
Score = 91.7 bits (46), Expect = 3e-18
Identities = 97/114 (85%)
Strand = Plus / Plus
Query: 48 cacattcatattgaagttaatgaatgtagacatatatatgtatgtagattcattaacatc 107
||||||||||| || |||||||||| |||||| | |||| | | ||||||||||||||||
Sbjct: 46 cacattcatatagatgttaatgaatctagacacacatatatttctagattcattaacatc 105
Query: 108 aatatgaatgtggagaatgctgaaatgacttacattgtgaaatggaggaagtat 161
|||||||||||| |||||| || | |||||||| ||||| |||||||||||
Sbjct: 106 tatatgaatgtgggcaatgctagaaagtcttacattatgaaacggaggaagtat 159
>RF00906;MIR1122;AACV01023372.1/6803-6964 39947:Oryza sativa
Japonica Group
Length = 162
Score = 103 bits (52), Expect = 7e-22
Identities = 122/146 (83%)
Strand = Plus / Plus
Query: 10 tccctccagttcacaatttaagtcagtgtggcatttcccacattcatattgaagttaatg 69
||||||| |||||||| ||||||| | | |||| || ||||||||||||||| | ||
Sbjct: 8 tccctccgtttcacaatgtaagtcattctagcatntctcacattcatattgaaatcgntg 67
Query: 70 aatgtagacatatatatgtatgtagattcattaacatcaatatgaatgtggagaatgctg 129
||| |||||||| |||| | | |||||||||| ||||||||||||||||| ||||||
Sbjct: 68 aatctagacatacatatatgtctagattcattgacatcaatatgaatgtgagaaatgcta 127
Query: 130 aaatgacttacattgtgaaatggagg 155
||||||||||||||||||| |||||
Sbjct: 128 gaatgacttacattgtgaaacggagg 153
Score = 87.7 bits (44), Expect = 4e-17
Identities = 120/146 (82%)
Strand = Plus / Minus
Query: 10 tccctccagttcacaatttaagtcagtgtggcatttcccacattcatattgaagttaatg 69
||||||| |||||||| ||||||| | | ||||||| |||||||||||||| || ||||
Sbjct: 155 tccctccgtttcacaatgtaagtcattctagcatttctcacattcatattgatgtcaatg 96
Query: 70 aatgtagacatatatatgtatgtagattcattaacatcaatatgaatgtggagaatgctg 129
||| ||||||||||| | | | |||||||| | |||||||||||||| |||||
Sbjct: 95 aatctagacatatatgtatgtctagattcancgatttcaatatgaatgtgaganatgcta 36
Query: 130 aaatgacttacattgtgaaatggagg 155
||||||||||||||||||| |||||
Sbjct: 35 gaatgacttacattgtgaaacggagg 10
>RF00906;MIR1122;AACV01007439.1/3817-3972 39947:Oryza sativa
Japonica Group
Length = 156
Score = 103 bits (52), Expect = 7e-22
Identities = 129/155 (83%), Gaps = 6/155 (3%)
Strand = Plus / Minus
Query: 7 tactccctccagttcacaatttaagtcagtgtggcatttcccacattcatattgaagtta 66
|||||||||| |||| ||| ||||||| | | |||||||||||||||||||||| || |
Sbjct: 152 tactccctccgtttcataatgtaagtcattctagcatttcccacattcatattgatgtca 93
Query: 67 atgaatgtagacatatatatgtatgtagattcattaacatcaatatgaatgtggagaatg 126
|||||| |||||| || | | ||||||||| |||||||||||||||||| ||||
Sbjct: 92 atgaatctagacagatgtct------agattcattgacatcaatatgaatgtgggaaatg 39
Query: 127 ctgaaatgacttacattgtgaaatggaggaagtat 161
| ||||||||||||||||||| |||||||||||
Sbjct: 38 atagaatgacttacattgtgaaacggaggaagtat 4
Score = 85.7 bits (43), Expect = 2e-16
Identities = 117/142 (82%), Gaps = 6/142 (4%)
Strand = Plus / Plus
Query: 19 ttcacaatttaagtcagtgtggcatttcccacattcatattgaagttaatgaatgtagac 78
|||||||| ||||||| | | ||||||||||||||||||||| || ||||||| |||||
Sbjct: 17 ttcacaatgtaagtcattctatcatttcccacattcatattgatgtcaatgaatctagac 76
Query: 79 atatatatgtatgtagattcattaacatcaatatgaatgtggagaatgctgaaatgactt 138
|| | | | ||||||||| |||||||||||||||||| |||||| ||||||||
Sbjct: 77 atctgtct------agattcattgacatcaatatgaatgtgggaaatgctagaatgactt 130
Query: 139 acattgtgaaatggaggaagta 160
||||| ||||| ||||| ||||
Sbjct: 131 acattatgaaacggagggagta 152
>RF00906;MIR1122;AAAA02007033.1/31416-31265 39946:Oryza sativa
Indica Group
Length = 152
Score = 103 bits (52), Expect = 7e-22
Identities = 130/156 (83%), Gaps = 10/156 (6%)
Strand = Plus / Minus
Query: 6 gtactccctccagttcacaatttaagtcagtgtggcatttcccacattcatattgaagtt 65
|||||||| || |||||||| ||||||| | | |||||||||||||||||||||| |||
Sbjct: 149 gtactccccccgtttcacaatgtaagtcattctagcatttcccacattcatattgatgtt 90
Query: 66 aatgaatgtagacatatatatgtatgtagattcattaacatcaatatgaatgtggagaat 125
||||||| |||||||| | |||||||||||||| ||||| ||||||| |||
Sbjct: 89 aatgaat--------atatatgtct--agattcattaacattaatataaatgtgggaaat 40
Query: 126 gctgaaatgacttacattgtgaaatggaggaagtat 161
||| ||||||||||||||||||| |||||||||||
Sbjct: 39 gctagaatgacttacattgtgaaacggaggaagtat 4
Score = 95.6 bits (48), Expect = 2e-19
Identities = 109/131 (83%), Gaps = 10/131 (7%)
Strand = Plus / Plus
Query: 19 ttcacaatttaagtcagtgtggcatttcccacattcatattgaagttaatgaatgtagac 78
|||||||| ||||||| | | |||||||||||||| ||||| | |||||||||| |||||
Sbjct: 17 ttcacaatgtaagtcattctagcatttcccacatttatattaatgttaatgaatctagac 76
Query: 79 atatatatgtatgtagattcattaacatcaatatgaatgtggagaatgctgaaatgactt 138
|||||||| |||||||||||||||||||||||| |||||| ||||||||
Sbjct: 77 atatatat----------tcattaacatcaatatgaatgtgggaaatgctagaatgactt 126
Query: 139 acattgtgaaa 149
|||||||||||
Sbjct: 127 acattgtgaaa 137
>RF00906;MIR1122;AP005719.3/148604-148741 39947:Oryza sativa
Japonica Group
Length = 138
Score = 103 bits (52), Expect = 7e-22
Identities = 70/76 (92%)
Strand = Plus / Plus
Query: 85 atgtatgtagattcattaacatcaatatgaatgtggagaatgctgaaatgacttacattg 144
|||||| | ||||||||||||||||||||||||||| |||||| |||||||||||||||
Sbjct: 59 atgtatcttgattcattaacatcaatatgaatgtgggaaatgctaaaatgacttacattg 118
Query: 145 tgaaatggaggaagta 160
||||| ||||||||||
Sbjct: 119 tgaaacggaggaagta 134
Score = 69.9 bits (35), Expect = 1e-11
Identities = 44/47 (93%)
Strand = Plus / Minus
Query: 103 acatcaatatgaatgtggagaatgctgaaatgacttacattgtgaaa 149
||||||||||||||||||| ||||| ||||||||||||||||||||
Sbjct: 62 acatcaatatgaatgtggaaaatgccaaaatgacttacattgtgaaa 16
Score = 67.9 bits (34), Expect = 4e-11
Identities = 49/54 (90%)
Strand = Plus / Minus
Query: 19 ttcacaatttaagtcagtgtggcatttcccacattcatattgaagttaatgaat 72
|||||||| ||||||| | | |||||||||||||||||||||| ||||||||||
Sbjct: 122 ttcacaatgtaagtcattttagcatttcccacattcatattgatgttaatgaat 69
Score = 56.0 bits (28), Expect = 2e-07
Identities = 49/56 (87%)
Strand = Plus / Plus
Query: 6 gtactccctccagttcacaatttaagtcagtgtggcatttcccacattcatattga 61
||||||| ||| |||||||| ||||||| | |||||||| |||||||||||||||
Sbjct: 4 gtactccatccgtttcacaatgtaagtcattttggcattttccacattcatattga 59
>RF00906;MIR1122;AAAA02032498.1/8257-8124 39946:Oryza sativa Indica
Group
Length = 134
Score = 103 bits (52), Expect = 7e-22
Identities = 67/72 (93%)
Strand = Plus / Plus
Query: 89 atgtagattcattaacatcaatatgaatgtggagaatgctgaaatgacttacattgtgaa 148
||||||||||||||||||||||||||||||||| ||| || |||||||||| ||||||||
Sbjct: 59 atgtagattcattaacatcaatatgaatgtggaaaatactaaaatgacttatattgtgaa 118
Query: 149 atggaggaagta 160
| ||||||||||
Sbjct: 119 acggaggaagta 130
Score = 69.9 bits (35), Expect = 1e-11
Identities = 53/59 (89%)
Strand = Plus / Minus
Query: 103 acatcaatatgaatgtggagaatgctgaaatgacttacattgtgaaatggaggaagtat 161
||||||||||||||||||| ||| | |||||||||||||||||||| ||||| |||||
Sbjct: 62 acatcaatatgaatgtggaaaatacaaaaatgacttacattgtgaaacggagggagtat 4
Score = 52.0 bits (26), Expect = 2e-06
Identities = 47/54 (87%)
Strand = Plus / Minus
Query: 19 ttcacaatttaagtcagtgtggcatttcccacattcatattgaagttaatgaat 72
|||||||| ||||||| | | | |||| ||||||||||||||| ||||||||||
Sbjct: 118 ttcacaatataagtcattttagtattttccacattcatattgatgttaatgaat 65
Score = 46.1 bits (23), Expect = 2e-04
Identities = 47/55 (85%)
Strand = Plus / Plus
Query: 7 tactccctccagttcacaatttaagtcagtgtggcatttcccacattcatattga 61
|||||||||| |||||||| ||||||| | | | |||| |||||||||||||||
Sbjct: 5 tactccctccgtttcacaatgtaagtcatttttgtattttccacattcatattga 59
>RF00906;MIR1122;AAAA02027999.1/42024-42185 39946:Oryza sativa
Indica Group
Length = 162
Score = 99.6 bits (50), Expect = 1e-20
Identities = 128/154 (83%)
Strand = Plus / Minus
Query: 7 tactccctccagttcacaatttaagtcagtgtggcatttcccacattcatattgaagtta 66
|||||||||| |||| ||| ||||||| | | ||||| |||| |||||||| || ||||
Sbjct: 158 tactccctccgtttcataatgtaagtcattctagcattacccatattcatatagatgtta 99
Query: 67 atgaatgtagacatatatatgtatgtagattcattaacatcaatatgaatgtggagaatg 126
|||||| |||||| | || | ||| || ||||||||||||| ||||| |||||| ||||
Sbjct: 98 atgaatctagacacacatctatatctaaattcattaacatctatatgtatgtgggcaatg 39
Query: 127 ctgaaatgacttacattgtgaaatggaggaagta 160
|| ||||||||||||| ||||| ||||||||||
Sbjct: 38 ctagaatgacttacattatgaaacggaggaagta 5
Score = 93.7 bits (47), Expect = 7e-19
Identities = 119/143 (83%)
Strand = Plus / Plus
Query: 19 ttcacaatttaagtcagtgtggcatttcccacattcatattgaagttaatgaatgtagac 78
|||| ||| ||||||| | | ||||| ||||||| ||||| || |||||||||| ||||
Sbjct: 17 ttcataatgtaagtcattctagcattgcccacatacatatagatgttaatgaatttagat 76
Query: 79 atatatatgtatgtagattcattaacatcaatatgaatgtggagaatgctgaaatgactt 138
||| || ||| | |||||||||||||||| |||||||| ||| |||||| ||||||||
Sbjct: 77 atagatgtgtgtctagattcattaacatctatatgaatatgggtaatgctagaatgactt 136
Query: 139 acattgtgaaatggaggaagtat 161
||||| ||||| ||||| |||||
Sbjct: 137 acattatgaaacggagggagtat 159
>RF00906;MIR1122;AAAA02003204.1/17037-17198 39946:Oryza sativa
Indica Group
Length = 162
Score = 99.6 bits (50), Expect = 1e-20
Identities = 128/154 (83%)
Strand = Plus / Plus
Query: 7 tactccctccagttcacaatttaagtcagtgtggcatttcccacattcatattgaagtta 66
|||||||||| |||| ||| ||||||| | | |||||| |||||||||||| || | |
Sbjct: 5 tactccctccgtttcataatgtaagtcattctagcattttccacattcatatcgatgcca 64
Query: 67 atgaatgtagacatatatatgtatgtagattcattaacatcaatatgaatgtggagaatg 126
|||||| ||||||||||||| ||| ||||||||||| |||||||||| ||||| | |||
Sbjct: 65 atgaatctagacatatatatctatctagattcattagcatcaatatggatgtgaacaata 124
Query: 127 ctgaaatgacttacattgtgaaatggaggaagta 160
| ||||||||||||| ||||| ||||| ||||
Sbjct: 125 gtagaatgacttacattatgaaacggagggagta 158
Score = 83.8 bits (42), Expect = 7e-16
Identities = 96/114 (84%)
Strand = Plus / Minus
Query: 48 cacattcatattgaagttaatgaatgtagacatatatatgtatgtagattcattaacatc 107
||||| |||||||| | |||||||| |||| | |||||| | | |||||||||| ||||
Sbjct: 117 cacatccatattgatgctaatgaatctagatagatatatatgtctagattcattggcatc 58
Query: 108 aatatgaatgtggagaatgctgaaatgacttacattgtgaaatggaggaagtat 161
||||||||||||| |||||| ||||||||||||| ||||| ||||| |||||
Sbjct: 57 gatatgaatgtggaaaatgctagaatgacttacattatgaaacggagggagtat 4
>RF00906;MIR1122;AP002866.1/46564-46725 39947:Oryza sativa Japonica
Group
Length = 162
Score = 99.6 bits (50), Expect = 1e-20
Identities = 128/154 (83%)
Strand = Plus / Plus
Query: 7 tactccctccagttcacaatttaagtcagtgtggcatttcccacattcatattgaagtta 66
|||||||||| |||| ||| ||||||| | | |||||| |||||||||||| || | |
Sbjct: 5 tactccctccgtttcataatgtaagtcattctagcattttccacattcatatcgatgcca 64
Query: 67 atgaatgtagacatatatatgtatgtagattcattaacatcaatatgaatgtggagaatg 126
|||||| ||||||||||||| ||| ||||||||||| |||| ||||| ||||| | |||
Sbjct: 65 atgaatctagacatatatatttatctagattcattagcatcgatatggatgtgaaaaata 124
Query: 127 ctgaaatgacttacattgtgaaatggaggaagta 160
|| ||||||||||||| ||||| ||||| ||||
Sbjct: 125 ctagaatgacttacattatgaaacggagggagta 158
Score = 77.8 bits (39), Expect = 4e-14
Identities = 126/155 (81%)
Strand = Plus / Minus
Query: 7 tactccctccagttcacaatttaagtcagtgtggcatttcccacattcatattgaagtta 66
|||||||||| |||| ||| ||||||| | | | |||| ||||| ||||| || | ||
Sbjct: 158 tactccctccgtttcataatgtaagtcattctagtatttttcacatccatatcgatgcta 99
Query: 67 atgaatgtagacatatatatgtatgtagattcattaacatcaatatgaatgtggagaatg 126
|||||| |||| | |||||| | | |||||||||| |||| ||||||||||||| ||||
Sbjct: 98 atgaatctagataaatatatatgtctagattcattggcatcgatatgaatgtggaaaatg 39
Query: 127 ctgaaatgacttacattgtgaaatggaggaagtat 161
|| ||||||||||||| ||||| ||||| |||||
Sbjct: 38 ctagaatgacttacattatgaaacggagggagtat 4
>RF00906;MIR1122;AACV01003595.1/12314-12153 39947:Oryza sativa
Japonica Group
Length = 162
Score = 99.6 bits (50), Expect = 1e-20
Identities = 128/154 (83%)
Strand = Plus / Plus
Query: 7 tactccctccagttcacaatttaagtcagtgtggcatttcccacattcatattgaagtta 66
|||||||||| |||| ||| ||||||| | | ||||| || | |||||||| || ||||
Sbjct: 5 tactccctccgtttcataatgtaagtcattctagcattgcctatattcatatagatgtta 64
Query: 67 atgaatgtagacatatatatgtatgtagattcattaacatcaatatgaatgtggagaatg 126
|||||| |||||||| | || ||| |||||||||||||||| ||||||||||| | ||
Sbjct: 65 atgaatctagacatagacatatatctagattcattaacatccatatgaatgtgagcattg 124
Query: 127 ctgaaatgacttacattgtgaaatggaggaagta 160
|| ||||||||||||| ||||| ||||||||||
Sbjct: 125 ctagaatgacttacattatgaaacggaggaagta 158
Score = 73.8 bits (37), Expect = 7e-13
Identities = 94/113 (83%)
Strand = Plus / Minus
Query: 48 cacattcatattgaagttaatgaatgtagacatatatatgtatgtagattcattaacatc 107
||||||||||| || |||||||||| |||| |||| | | | | ||||||||||||||||
Sbjct: 117 cacattcatatggatgttaatgaatctagatatatgtctatgtctagattcattaacatc 58
Query: 108 aatatgaatgtggagaatgctgaaatgacttacattgtgaaatggaggaagta 160
|||||||| | | |||||| ||||||||||||| ||||| ||||| ||||
Sbjct: 57 tatatgaatataggcaatgctagaatgacttacattatgaaacggagggagta 5
>RF00906;MIR1122;AAAA02023191.1/5200-5048 39946:Oryza sativa Indica
Group
Length = 153
Score = 97.6 bits (49), Expect = 5e-20
Identities = 64/69 (92%)
Strand = Plus / Minus
Query: 92 tagattcattaacatcaatatgaatgtggagaatgctgaaatgacttacattgtgaaatg 151
|||||||||||||||||||||||||||||| |||||| ||||||||||||| ||||| |
Sbjct: 73 tagattcattaacatcaatatgaatgtggaaaatgctagaatgacttacattatgaaacg 14
Query: 152 gaggaagta 160
|||||||||
Sbjct: 13 gaggaagta 5
Score = 67.9 bits (34), Expect = 4e-11
Identities = 49/54 (90%)
Strand = Plus / Plus
Query: 96 ttcattaacatcaatatgaatgtggagaatgctgaaatgacttacattgtgaaa 149
|||||||||||||||||||||||| |||||| |||||||||||||||||||
Sbjct: 85 ttcattaacatcaatatgaatgtgagaaatgctagaatgacttacattgtgaaa 138
Score = 52.0 bits (26), Expect = 2e-06
Identities = 47/54 (87%)
Strand = Plus / Plus
Query: 19 ttcacaatttaagtcagtgtggcatttcccacattcatattgaagttaatgaat 72
|||| ||| ||||||| | | |||||| ||||||||||||||| ||||||||||
Sbjct: 17 ttcataatgtaagtcattctagcattttccacattcatattgatgttaatgaat 70
>RF00906;MIR1122;AP006756.2/89933-90079 39947:Oryza sativa Japonica
Group
Length = 147
Score = 97.6 bits (49), Expect = 5e-20
Identities = 64/69 (92%)
Strand = Plus / Minus
Query: 92 tagattcattaacatcaatatgaatgtggagaatgctgaaatgacttacattgtgaaatg 151
||||||||||| ||||||||||||||||| |||||| |||||||||||||||||||| |
Sbjct: 73 tagattcattagcatcaatatgaatgtgggaaatgctaaaatgacttacattgtgaaacg 14
Query: 152 gaggaagta 160
|||||||||
Sbjct: 13 gaggaagta 5
Score = 63.9 bits (32), Expect = 6e-10
Identities = 57/64 (89%), Gaps = 1/64 (1%)
Strand = Plus / Plus
Query: 98 cattaacatcaatatgaatgtggagaatgctgaa-atgacttacattgtgaaatggagga 156
||||| ||||||||||||||||| |||||| || |||||||||||||||||| |||||
Sbjct: 80 cattagcatcaatatgaatgtgggaaatgctaaacatgacttacattgtgaaacggaggg 139
Query: 157 agta 160
||||
Sbjct: 140 agta 143
Score = 60.0 bits (30), Expect = 1e-08
Identities = 48/54 (88%)
Strand = Plus / Plus
Query: 19 ttcacaatttaagtcagtgtggcatttcccacattcatattgaagttaatgaat 72
|||||||| ||||||| | | |||||||||||||||||||||| | ||||||||
Sbjct: 17 ttcacaatgtaagtcattttagcatttcccacattcatattgatgctaatgaat 70
>RF00906;MIR1122;AAAA02032259.1/26586-26696 39946:Oryza sativa
Indica Group
Length = 111
Score = 97.6 bits (49), Expect = 5e-20
Identities = 64/69 (92%)
Strand = Plus / Minus
Query: 92 tagattcattaacatcaatatgaatgtggagaatgctgaaatgacttacattgtgaaatg 151
||||||||||||||||||||||||||||| |||||| ||||||||||||||||||| |
Sbjct: 73 tagattcattaacatcaatatgaatgtgggaaatgctagaatgacttacattgtgaaacg 14
Query: 152 gaggaagta 160
|||||||||
Sbjct: 13 gaggaagta 5
Score = 83.8 bits (42), Expect = 7e-16
Identities = 69/78 (88%)
Strand = Plus / Plus
Query: 6 gtactccctccagttcacaatttaagtcagtgtggcatttcccacattcatattgaagtt 65
||||| ||||| |||||||| ||||||| | | |||||||||||||||||||||| |||
Sbjct: 4 gtacttcctccgtttcacaatgtaagtcattctagcatttcccacattcatattgatgtt 63
Query: 66 aatgaatgtagacatata 83
||||||| ||||||||||
Sbjct: 64 aatgaatctagacatata 81
>RF00906;MIR1122;AC108755.2/71660-71514 39947:Oryza sativa Japonica
Group
Length = 147
Score = 97.6 bits (49), Expect = 5e-20
Identities = 64/69 (92%)
Strand = Plus / Plus
Query: 92 tagattcattaacatcaatatgaatgtggagaatgctgaaatgacttacattgtgaaatg 151
||||||||||| ||||||||||||||||| |||||| |||||||||||||||||||| |
Sbjct: 75 tagattcattagcatcaatatgaatgtgggaaatgctaaaatgacttacattgtgaaacg 134
Query: 152 gaggaagta 160
|||||||||
Sbjct: 135 gaggaagta 143
Score = 63.9 bits (32), Expect = 6e-10
Identities = 57/64 (89%), Gaps = 1/64 (1%)
Strand = Plus / Minus
Query: 98 cattaacatcaatatgaatgtggagaatgctgaa-atgacttacattgtgaaatggagga 156
||||| ||||||||||||||||| |||||| || |||||||||||||||||| |||||
Sbjct: 68 cattagcatcaatatgaatgtgggaaatgctaaacatgacttacattgtgaaacggaggg 9
Query: 157 agta 160
||||
Sbjct: 8 agta 5
Score = 60.0 bits (30), Expect = 1e-08
Identities = 48/54 (88%)
Strand = Plus / Minus
Query: 19 ttcacaatttaagtcagtgtggcatttcccacattcatattgaagttaatgaat 72
|||||||| ||||||| | | |||||||||||||||||||||| | ||||||||
Sbjct: 131 ttcacaatgtaagtcattttagcatttcccacattcatattgatgctaatgaat 78
>RF00906;MIR1122;AAAA02022474.1/18183-18335 39946:Oryza sativa
Indica Group
Length = 153
Score = 97.6 bits (49), Expect = 5e-20
Identities = 91/104 (87%), Gaps = 2/104 (1%)
Strand = Plus / Minus
Query: 7 tactccctccagttcacaatttaagtcagtgtggcatttcccacattcatattgaagtta 66
|||||||||| |||||||| ||||||| | | |||||||||| ||||||||||| ||||
Sbjct: 149 tactccctccgtttcacaatataagtcattttagcatttcccatattcatattgatgtta 90
Query: 67 atgaatgtagacatatatatgtatgtagattcattaacatcaat 110
|||||| ||||||| |||| ||| |||||||||||||||||||
Sbjct: 89 atgaatctagacat--atatctatctagattcattaacatcaat 48
Score = 89.7 bits (45), Expect = 1e-17
Identities = 90/104 (86%), Gaps = 2/104 (1%)
Strand = Plus / Plus
Query: 57 attgaagttaatgaatgtagacatatatatgtatgtagattcattaacatcaatatgaat 116
||||| |||||||||| |||| | |||||||| | ||||||||||||||||||||||||
Sbjct: 48 attgatgttaatgaatctagatagatatatgtct--agattcattaacatcaatatgaat 105
Query: 117 gtggagaatgctgaaatgacttacattgtgaaatggaggaagta 160
||| |||||| |||||||||| ||||||||| ||||| ||||
Sbjct: 106 atgggaaatgctaaaatgacttatattgtgaaacggagggagta 149
>RF00906;MIR1122;AP003368.2/55944-55807 39947:Oryza sativa Japonica
Group
Length = 138
Score = 97.6 bits (49), Expect = 5e-20
Identities = 64/69 (92%)
Strand = Plus / Minus
Query: 92 tagattcattaacatcaatatgaatgtggagaatgctgaaatgacttacattgtgaaatg 151
|||||||||||||||||||||||||||||| |||||| ||||||||||||||||||| |
Sbjct: 73 tagattcattaacatcaatatgaatgtggaaaatgctagaatgacttacattgtgaaacg 14
Query: 152 gaggaagta 160
|||| ||||
Sbjct: 13 gagggagta 5
Score = 69.9 bits (35), Expect = 1e-11
Identities = 62/71 (87%)
Strand = Plus / Plus
Query: 7 tactccctccagttcacaatttaagtcagtgtggcatttcccacattcatattgaagtta 66
|||||||||| |||||||| ||||||| | | |||||| ||||||||||||||| ||||
Sbjct: 5 tactccctccgtttcacaatgtaagtcattctagcattttccacattcatattgatgtta 64
Query: 67 atgaatgtaga 77
|||||| ||||
Sbjct: 65 atgaatctaga 75
>RF00906;MIR1122;AACV01010647.1/16392-16231 39947:Oryza sativa
Japonica Group
Length = 162
Score = 97.6 bits (49), Expect = 5e-20
Identities = 103/121 (85%)
Strand = Plus / Plus
Query: 40 gcatttcccacattcatattgaagttaatgaatgtagacatatatatgtatgtagattca 99
||||| ||||||||||||| || |||||||||| |||| |||||| ||| | ||||||||
Sbjct: 38 gcattgcccacattcatatagatgttaatgaatctagaaatatatgtgtgtctagattca 97
Query: 100 ttaacatcaatatgaatgtggagaatgctgaaatgacttacattgtgaaatggaggaagt 159
|||||||| ||||||||||| |||||| ||| | |||||||| ||||| ||||| |||
Sbjct: 98 ttaacatctatatgaatgtgagcaatgctaaaaagtcttacattatgaaacggagggagt 157
Query: 160 a 160
|
Sbjct: 158 a 158
Score = 91.7 bits (46), Expect = 3e-18
Identities = 97/114 (85%)
Strand = Plus / Minus
Query: 48 cacattcatattgaagttaatgaatgtagacatatatatgtatgtagattcattaacatc 107
||||||||||| || |||||||||| |||||| | |||| | | ||||||||||||||||
Sbjct: 117 cacattcatatagatgttaatgaatctagacacacatatatttctagattcattaacatc 58
Query: 108 aatatgaatgtggagaatgctgaaatgacttacattgtgaaatggaggaagtat 161
|||||||||||| |||||| || | |||||||| ||||| |||||||||||
Sbjct: 57 tatatgaatgtgggcaatgctagaaagtcttacattatgaaacggaggaagtat 4
>RF00906;MIR1122;AAAA02032822.1/7151-7018 39946:Oryza sativa Indica
Group
Length = 134
Score = 95.6 bits (48), Expect = 2e-19
Identities = 75/84 (89%)
Strand = Plus / Plus
Query: 77 acatatatatgtatgtagattcattaacatcaatatgaatgtggagaatgctgaaatgac 136
|||| ||||| ||| |||||||||||||||||||||| | ||| | |||||| |||||||
Sbjct: 47 acatttatatctatctagattcattaacatcaatatgtacgtgaaaaatgctaaaatgac 106
Query: 137 ttacattgtgaaatggaggaagta 160
||||||||||||| ||||||||||
Sbjct: 107 ttacattgtgaaacggaggaagta 130
>RF00906;MIR1122;AP004812.3/16268-16113 39947:Oryza sativa Japonica
Group
Length = 156
Score = 95.6 bits (48), Expect = 2e-19
Identities = 128/155 (82%), Gaps = 6/155 (3%)
Strand = Plus / Plus
Query: 6 gtactccctccagttcacaatttaagtcagtgtggcatttcccacattcatattgaagtt 65
||||| ||||| |||||||| ||||||| | | |||||| ||||||||||||||| ||
Sbjct: 4 gtacttcctccgtttcacaatgtaagtcattctagcattttccacattcatattgatgt- 62
Query: 66 aatgaatgtagacatatatatgtatgtagattcattaacatcaatatgaatgtggagaat 125
|| ||||||||| ||| ||| || | ||||||||||||||||||||||||| ||
Sbjct: 63 -----atctagacatatgtatctatctaaactcattaacatcaatatgaatgtggaaaag 117
Query: 126 gctgaaatgacttacattgtgaaatggaggaagta 160
||| ||||||||||||||||||| ||||| ||||
Sbjct: 118 gctagaatgacttacattgtgaaacggagggagta 152
Score = 93.7 bits (47), Expect = 7e-19
Identities = 127/154 (82%), Gaps = 6/154 (3%)
Strand = Plus / Minus
Query: 7 tactccctccagttcacaatttaagtcagtgtggcatttcccacattcatattgaagtta 66
|||||||||| |||||||| ||||||| | | || ||| ||||||||||||||| ||||
Sbjct: 152 tactccctccgtttcacaatgtaagtcattctagccttttccacattcatattgatgtta 93
Query: 67 atgaatgtagacatatatatgtatgtagattcattaacatcaatatgaatgtggagaatg 126
|||| | |||| | ||| || | | ||||| ||||||||||||||||||| ||||
Sbjct: 92 atgagtttagatagatacatatgtctagat------acatcaatatgaatgtggaaaatg 39
Query: 127 ctgaaatgacttacattgtgaaatggaggaagta 160
|| ||||||||||||||||||| ||||||||||
Sbjct: 38 ctagaatgacttacattgtgaaacggaggaagta 5
>RF00906;MIR1122;AACV01018808.1/29876-29745 39947:Oryza sativa
Japonica Group
Length = 132
Score = 95.6 bits (48), Expect = 2e-19
Identities = 60/64 (93%)
Strand = Plus / Minus
Query: 97 tcattaacatcaatatgaatgtggagaatgctgaaatgacttacattgtgaaatggagga 156
||||||||||||||||||||||||| |||||| |||||||||||||||||||| |||||
Sbjct: 68 tcattaacatcaatatgaatgtggaaaatgctaaaatgacttacattgtgaaacggaggg 9
Query: 157 agta 160
||||
Sbjct: 8 agta 5
Score = 71.9 bits (36), Expect = 3e-12
Identities = 54/60 (90%)
Strand = Plus / Plus
Query: 101 taacatcaatatgaatgtggagaatgctgaaatgacttacattgtgaaatggaggaagta 160
||||||||||||||||||||| |||||| |||| | ||||||||||||| ||||| ||||
Sbjct: 69 taacatcaatatgaatgtggaaaatgctaaaataaattacattgtgaaacggagggagta 128
Score = 65.9 bits (33), Expect = 2e-10
Identities = 57/65 (87%)
Strand = Plus / Plus
Query: 6 gtactccctccagttcacaatttaagtcagtgtggcatttcccacattcatattgaagtt 65
||||||||||| |||||||| ||||||| | | |||||| ||||||||||||||| |||
Sbjct: 4 gtactccctccgtttcacaatgtaagtcattttagcattttccacattcatattgatgtt 63
Query: 66 aatga 70
|||||
Sbjct: 64 aatga 68
>RF00906;MIR1122;AP008214.1/11401129-11401273 39947:Oryza sativa
Japonica Group
Length = 145
Score = 93.7 bits (47), Expect = 7e-19
Identities = 62/67 (92%)
Strand = Plus / Minus
Query: 94 gattcattaacatcaatatgaatgtggagaatgctgaaatgacttacattgtgaaatgga 153
||||||||||||||||||||||||||| |||||| ||||||||||||||||||| |||
Sbjct: 71 gattcattaacatcaatatgaatgtgggaaatgctagaatgacttacattgtgaaacgga 12
Query: 154 ggaagta 160
|||||||
Sbjct: 11 ggaagta 5
Score = 69.9 bits (35), Expect = 1e-11
Identities = 59/67 (88%)
Strand = Plus / Plus
Query: 94 gattcattaacatcaatatgaatgtggagaatgctgaaatgacttacattgtgaaatgga 153
|||||||||||||||||||||||||| |||||| ||||| ||||||||||||| |||
Sbjct: 75 gattcattaacatcaatatgaatgtgagaaatgctagaatgaattacattgtgaaacgga 134
Query: 154 ggaagta 160
|| ||||
Sbjct: 135 gggagta 141
Score = 67.9 bits (34), Expect = 4e-11
Identities = 49/54 (90%)
Strand = Plus / Plus
Query: 19 ttcacaatttaagtcagtgtggcatttcccacattcatattgaagttaatgaat 72
|||||||| ||||||| | | |||||||||||||||||||||| ||||||||||
Sbjct: 17 ttcacaatgtaagtcattctagcatttcccacattcatattgatgttaatgaat 70
>RF00906;MIR1122;AACV01008986.1/10814-10653 39947:Oryza sativa
Japonica Group
Length = 162
Score = 93.7 bits (47), Expect = 7e-19
Identities = 128/155 (82%)
Strand = Plus / Minus
Query: 6 gtactccctccagttcacaatttaagtcagtgtggcatttcccacattcatattgaagtt 65
||||||||||| |||| ||| ||||||| | | ||||| ||||||||||||| || | |
Sbjct: 159 gtactccctccgtttcataatgtaagtcattttagcattgcccacattcatatagatggt 100
Query: 66 aatgaatgtagacatatatatgtatgtagattcattaacatcaatatgaatgtggagaat 125
||||||| || |||||| | | ||| |||||||||||||||| ||||| || ||| ||
Sbjct: 99 aatgaatctaaacatatgtctatatctagattcattaacatctatatgcatatgggtaag 40
Query: 126 gctgaaatgacttacattgtgaaatggaggaagta 160
||| ||||||||||||| ||||| ||||||||||
Sbjct: 39 gctagaatgacttacattatgaaacggaggaagta 5
Score = 77.8 bits (39), Expect = 4e-14
Identities = 90/107 (84%)
Strand = Plus / Plus
Query: 54 catattgaagttaatgaatgtagacatatatatgtatgtagattcattaacatcaatatg 113
||||| || |||||||||| |||| ||| | || | | ||||||||||| |||| |||||
Sbjct: 52 catatagatgttaatgaatctagatatagacatatgtttagattcattaccatctatatg 111
Query: 114 aatgtggagaatgctgaaatgacttacattgtgaaatggaggaagta 160
||||||| |||||| |||||||||||||| ||||| ||||| ||||
Sbjct: 112 aatgtgggcaatgctaaaatgacttacattatgaaacggagggagta 158
>RF00906;MIR1122;AAAA02000682.1/3832-3993 39946:Oryza sativa Indica
Group
Length = 162
Score = 93.7 bits (47), Expect = 7e-19
Identities = 128/155 (82%)
Strand = Plus / Plus
Query: 6 gtactccctccagttcacaatttaagtcagtgtggcatttcccacattcatattgaagtt 65
||||||||||| |||| ||| ||||||| | | ||||| || |||||||||| || |||
Sbjct: 4 gtactccctccgtttcataatgtaagtcattctagcattaccaacattcatatagatgtt 63
Query: 66 aatgaatgtagacatatatatgtatgtagattcattaacatcaatatgaatgtggagaat 125
||||||| |||||| | || | ||| || ||||||||||||| |||| |||||| |||
Sbjct: 64 aatgaatctagacacacatctatatctaaattcattaacatctatatatatgtgggcaat 123
Query: 126 gctgaaatgacttacattgtgaaatggaggaagta 160
||| ||||||||||||| ||||| ||||||||||
Sbjct: 124 gctagaatgacttacattatgaaacggaggaagta 158
Score = 83.8 bits (42), Expect = 7e-16
Identities = 117/142 (82%)
Strand = Plus / Minus
Query: 19 ttcacaatttaagtcagtgtggcatttcccacattcatattgaagttaatgaatgtagac 78
|||| ||| ||||||| | | ||||| ||||||| |||| || |||||||||| ||||
Sbjct: 146 ttcataatgtaagtcattctagcattgcccacatatatatagatgttaatgaatttagat 87
Query: 79 atatatatgtatgtagattcattaacatcaatatgaatgtggagaatgctgaaatgactt 138
||| || ||| | |||||||||||||||| |||||||||| | |||||| ||||||||
Sbjct: 86 atagatgtgtgtctagattcattaacatctatatgaatgttggtaatgctagaatgactt 27
Query: 139 acattgtgaaatggaggaagta 160
||||| ||||| ||||| ||||
Sbjct: 26 acattatgaaacggagggagta 5
>RF00906;MIR1122;AP005729.3/123154-122993 39947:Oryza sativa
Japonica Group
Length = 162
Score = 93.7 bits (47), Expect = 7e-19
Identities = 65/71 (91%)
Strand = Plus / Plus
Query: 46 cccacattcatattgaagttaatgaatgtagacatatatatgtatgtagattcattaaca 105
||||||||||||| || |||||||||| ||||||||||||||| | ||||||||||||||
Sbjct: 44 cccacattcatatagatgttaatgaatctagacatatatatgtgtctagattcattaaca 103
Query: 106 tcaatatgaat 116
|| ||||||||
Sbjct: 104 tctatatgaat 114
Score = 91.7 bits (46), Expect = 3e-18
Identities = 94/110 (85%)
Strand = Plus / Minus
Query: 51 attcatattgaagttaatgaatgtagacatatatatgtatgtagattcattaacatcaat 110
|||||||| || |||||||||| |||||| |||||| | | |||||||||||||||| ||
Sbjct: 114 attcatatagatgttaatgaatctagacacatatatatgtctagattcattaacatctat 55
Query: 111 atgaatgtggagaatgctgaaatgacttacattgtgaaatggaggaagta 160
|||||||||| ||| || || |||||||||| ||||| ||||||||||
Sbjct: 54 atgaatgtgggcaatactagaaagacttacattatgaaacggaggaagta 5
>RF00906;MIR1122;AAAA02010488.1/13895-13757 39946:Oryza sativa
Indica Group
Length = 139
Score = 91.7 bits (46), Expect = 3e-18
Identities = 64/70 (91%)
Strand = Plus / Minus
Query: 92 tagattcattaacatcaatatgaatgtggagaatgctgaaatgacttacattgtgaaatg 151
|||||||||| |||||||||||||||||| |||||| ||||||||||||||||||| |
Sbjct: 73 tagattcattgacatcaatatgaatgtgggaaatgctagaatgacttacattgtgaaacg 14
Query: 152 gaggaagtat 161
||||||||||
Sbjct: 13 gaggaagtat 4
Score = 65.9 bits (33), Expect = 2e-10
Identities = 54/61 (88%)
Strand = Plus / Plus
Query: 19 ttcacaatttaagtcagtgtggcatttcccacattcatattgaagttaatgaatgtagac 78
|||||||| ||||||| | | |||||||||||||||||||||| || ||||||| |||||
Sbjct: 17 ttcacaatgtaagtcattctagcatttcccacattcatattgatgtcaatgaatctagac 76
Query: 79 a 79
|
Sbjct: 77 a 77
Score = 61.9 bits (31), Expect = 3e-09
Identities = 52/59 (88%)
Strand = Plus / Plus
Query: 102 aacatcaatatgaatgtggagaatgctgaaatgacttacattgtgaaatggaggaagta 160
||||||||||||||||||| |||||| ||||||||||||| ||||| ||||| ||||
Sbjct: 77 aacatcaatatgaatgtgggaaatgctagaatgacttacattatgaaacggagggagta 135
Score = 54.0 bits (27), Expect = 6e-07
Identities = 48/55 (87%)
Strand = Plus / Minus
Query: 7 tactccctccagttcacaatttaagtcagtgtggcatttcccacattcatattga 61
|||||||||| |||| ||| ||||||| | | ||||||||||||||||||||||
Sbjct: 135 tactccctccgtttcataatgtaagtcattctagcatttcccacattcatattga 81
>RF00906;MIR1122;AC084405.6/111503-111664 39947:Oryza sativa
Japonica Group
Length = 162
Score = 91.7 bits (46), Expect = 3e-18
Identities = 127/154 (82%)
Strand = Plus / Minus
Query: 7 tactccctccagttcacaatttaagtcagtgtggcatttcccacattcatattgaagtta 66
|||||||||| | |||||| ||||||| | | |||||| || ||||||||||| | ||
Sbjct: 158 tactccctccgttccacaatataagtcattctaacatttctcatattcatattgatgcta 99
Query: 67 atgaatgtagacatatatatgtatgtagattcattaacatcaatatgaatgtggagaatg 126
|||||| || |||||||||| ||| || |||||||| ||||||||||||| |||| |||
Sbjct: 98 atgaatctaaacatatatatctatctaaattcattagcatcaatatgaatatggaaaata 39
Query: 127 ctgaaatgacttacattgtgaaatggaggaagta 160
|| ||||||||| | |||| || ||||||||||
Sbjct: 38 ctagaatgacttatactgtggaacggaggaagta 5
Score = 61.9 bits (31), Expect = 3e-09
Identities = 64/75 (85%)
Strand = Plus / Plus
Query: 42 atttcccacattcatattgaagttaatgaatgtagacatatatatgtatgtagattcatt 101
|||| ||| ||||||||||| | |||||||| |||| | |||||| | | ||||||||||
Sbjct: 40 attttccatattcatattgatgctaatgaatttagatagatatatatgtttagattcatt 99
Query: 102 aacatcaatatgaat 116
| |||||||||||||
Sbjct: 100 agcatcaatatgaat 114
>RF00906;MIR1122;AAAA02014547.1/9044-9193 39946:Oryza sativa Indica
Group
Length = 150
Score = 91.7 bits (46), Expect = 3e-18
Identities = 64/70 (91%)
Strand = Plus / Minus
Query: 92 tagattcattaacatcaatatgaatgtggagaatgctgaaatgacttacattgtgaaatg 151
||||| |||||||||||||||||||||||| |||||| ||||||||||||||||||| |
Sbjct: 73 tagatacattaacatcaatatgaatgtggaaaatgctagaatgacttacattgtgaaacg 14
Query: 152 gaggaagtat 161
|||| |||||
Sbjct: 13 gagggagtat 4
Score = 83.8 bits (42), Expect = 7e-16
Identities = 63/70 (90%)
Strand = Plus / Plus
Query: 92 tagattcattaacatcaatatgaatgtggagaatgctgaaatgacttacattgtgaaatg 151
||||| ||||||||||||||||||||||| |||||| |||||||||||||||| || |
Sbjct: 78 tagatacattaacatcaatatgaatgtgggaaatgctagaatgacttacattgtggaacg 137
Query: 152 gaggaagtat 161
||||||||||
Sbjct: 138 gaggaagtat 147
>RF00906;MIR1122;AAAA02014050.1/50727-50888 39946:Oryza sativa
Indica Group
Length = 162
Score = 91.7 bits (46), Expect = 3e-18
Identities = 127/154 (82%)
Strand = Plus / Minus
Query: 7 tactccctccagttcacaatttaagtcagtgtggcatttcccacattcatattgaagtta 66
|||||||||| |||| ||| ||||||| | | ||||| || | |||||||| || ||||
Sbjct: 158 tactccctccgtttcataatgtaagtcattctagcattgcctatattcatatagatgtta 99
Query: 67 atgaatgtagacatatatatgtatgtagattcattaacatcaatatgaatgtggagaatg 126
|||||| |||| ||| | || ||| |||||||||||||||| ||||||||||| | ||
Sbjct: 98 atgaatctagatatagacatatatctagattcattaacatccatatgaatgtgagcattg 39
Query: 127 ctgaaatgacttacattgtgaaatggaggaagta 160
|| ||||||||||||| ||||| ||||||||||
Sbjct: 38 ctagaatgacttacattatgaaacggaggaagta 5
Score = 81.8 bits (41), Expect = 3e-15
Identities = 95/113 (84%)
Strand = Plus / Plus
Query: 48 cacattcatattgaagttaatgaatgtagacatatatatgtatgtagattcattaacatc 107
||||||||||| || |||||||||| |||| |||| | | ||| ||||||||||||||||
Sbjct: 46 cacattcatatggatgttaatgaatctagatatatgtctatatctagattcattaacatc 105
Query: 108 aatatgaatgtggagaatgctgaaatgacttacattgtgaaatggaggaagta 160
|||||||| | | |||||| ||||||||||||| ||||| ||||| ||||
Sbjct: 106 tatatgaatataggcaatgctagaatgacttacattatgaaacggagggagta 158
>RF00906;MIR1122;AP005620.3/106841-106973 39947:Oryza sativa
Japonica Group
Length = 133
Score = 91.7 bits (46), Expect = 3e-18
Identities = 61/66 (92%)
Strand = Plus / Minus
Query: 95 attcattaacatcaatatgaatgtggagaatgctgaaatgacttacattgtgaaatggag 154
|||||||||||||||||||||| |||| |||||| ||||||||||||||||||| ||||
Sbjct: 70 attcattaacatcaatatgaatatggaaaatgctagaatgacttacattgtgaaacggag 11
Query: 155 gaagta 160
||||||
Sbjct: 10 gaagta 5
Score = 56.0 bits (28), Expect = 2e-07
Identities = 46/52 (88%)
Strand = Plus / Plus
Query: 103 acatcaatatgaatgtggagaatgctgaaatgacttacattgtgaaatggag 154
|||||||||||||| |||| |||||| ||||||||||||| ||||| ||||
Sbjct: 72 acatcaatatgaatatggaaaatgctagaatgacttacattatgaaacggag 123
Score = 52.0 bits (26), Expect = 2e-06
Identities = 47/54 (87%)
Strand = Plus / Plus
Query: 19 ttcacaatttaagtcagtgtggcatttcccacattcatattgaagttaatgaat 72
|||||||| ||||||| | | |||||| ||| ||||||||||| ||||||||||
Sbjct: 17 ttcacaatgtaagtcattctagcattttccatattcatattgatgttaatgaat 70
>RF00906;MIR1122;AAAA02008121.1/20552-20439 39946:Oryza sativa
Indica Group
Length = 114
Score = 91.7 bits (46), Expect = 3e-18
Identities = 58/62 (93%)
Strand = Plus / Minus
Query: 99 attaacatcaatatgaatgtggagaatgctgaaatgacttacattgtgaaatggaggaag 158
||||||||||||||||||||||| ||| || |||||||||||||||||||| ||||||||
Sbjct: 66 attaacatcaatatgaatgtggaaaatactaaaatgacttacattgtgaaacggaggaag 7
Query: 159 ta 160
||
Sbjct: 6 ta 5
Score = 46.1 bits (23), Expect = 2e-04
Identities = 53/63 (84%)
Strand = Plus / Plus
Query: 19 ttcacaatttaagtcagtgtggcatttcccacattcatattgaagttaatgaatgtagac 78
|||||||| ||||||| | | | |||| ||||||||||||||| |||||| ||| || ||
Sbjct: 17 ttcacaatgtaagtcattttagtattttccacattcatattgatgttaataaatttatac 76
Query: 79 ata 81
|||
Sbjct: 77 ata 79
>RF00906;MIR1122;AP008216.1/8796170-8796022 39947:Oryza sativa
Japonica Group
Length = 149
Score = 89.7 bits (45), Expect = 1e-17
Identities = 63/69 (91%)
Strand = Plus / Plus
Query: 92 tagattcattaacatcaatatgaatgtggagaatgctgaaatgacttacattgtgaaatg 151
||||||||||||||||||||||||| |||| |||||| ||||||||||||||||||| |
Sbjct: 77 tagattcattaacatcaatatgaatatggaaaatgctagaatgacttacattgtgaaacg 136
Query: 152 gaggaagta 160
|||| ||||
Sbjct: 137 gagggagta 145
Score = 65.9 bits (33), Expect = 2e-10
Identities = 121/153 (79%), Gaps = 13/153 (8%)
Strand = Plus / Minus
Query: 7 tactccctccagttcacaatttaagtcagtgtggcatttcccacattcatattgaagtta 66
|||||||||| |||||||| ||||||| | | |||||| ||| ||||||||||| ||||
Sbjct: 145 tactccctccgtttcacaatgtaagtcattctagcattttccatattcatattgatgtta 86
Query: 67 atgaatgtagacatatatatgtatgtagattcattaacatcaatatgaatgtggagaatg 126
|||||| ||||| |||||| |||||||||||||| |||||| ||||
Sbjct: 85 atgaatctagac-------------tagatttattaacatcaatataaatgtgagaaatg 39
Query: 127 ctgaaatgacttacattgtgaaatggaggaagt 159
|| ||||||||||||| ||||| |||||||||
Sbjct: 38 ctagaatgacttacattatgaaacggaggaagt 6
>RF00906;MIR1122;AAAA02031088.1/15871-15728 39946:Oryza sativa
Indica Group
Length = 144
Score = 89.7 bits (45), Expect = 1e-17
Identities = 63/69 (91%)
Strand = Plus / Plus
Query: 92 tagattcattaacatcaatatgaatgtggagaatgctgaaatgacttacattgtgaaatg 151
|||||||||||||||||||||||||||||| |||||| ||||||||| ||||||||| |
Sbjct: 72 tagattcattaacatcaatatgaatgtggaaaatgctagaatgacttatattgtgaaacg 131
Query: 152 gaggaagta 160
|||| ||||
Sbjct: 132 gagggagta 140
Score = 75.8 bits (38), Expect = 2e-13
Identities = 56/62 (90%)
Strand = Plus / Minus
Query: 99 attaacatcaatatgaatgtggagaatgctgaaatgacttacattgtgaaatggaggaag 158
|||||||| ||||||||||||| |||||| ||||||||||||||||||| ||||||||
Sbjct: 66 attaacattaatatgaatgtgggaaatgctagaatgacttacattgtgaaacggaggaag 7
Query: 159 ta 160
||
Sbjct: 6 ta 5
Score = 75.8 bits (38), Expect = 2e-13
Identities = 68/78 (87%)
Strand = Plus / Minus
Query: 5 tgtactccctccagttcacaatttaagtcagtgtggcatttcccacattcatattgaagt 64
|||||||||||| |||||||| ||||||| | | |||||| ||||||||||||||| ||
Sbjct: 142 tgtactccctccgtttcacaatataagtcattctagcattttccacattcatattgatgt 83
Query: 65 taatgaatgtagacatat 82
|||||||| || ||||||
Sbjct: 82 taatgaatctatacatat 65
>RF00906;MIR1122;AC135419.2/12863-12720 39947:Oryza sativa
Japonica Group
Length = 144
Score = 89.7 bits (45), Expect = 1e-17
Identities = 72/81 (88%)
Strand = Plus / Plus
Query: 5 tgtactccctccagttcacaatttaagtcagtgtggcatttcccacattcatattgaagt 64
|||||| ||||| |||||||| ||||||| | | |||||||||||||||||||||| ||
Sbjct: 3 tgtactacctccgtttcacaatgtaagtcattctagcatttcccacattcatattgatgt 62
Query: 65 taatgaatgtagacatatata 85
|||||||| ||||||||||||
Sbjct: 63 taatgaatctagacatatata 83
Score = 89.7 bits (45), Expect = 1e-17
Identities = 63/69 (91%)
Strand = Plus / Minus
Query: 92 tagattcattaacatcaatatgaatgtggagaatgctgaaatgacttacattgtgaaatg 151
||||||||||||||||||||||||||||| |||||| ||||||||||||||||||| |
Sbjct: 73 tagattcattaacatcaatatgaatgtgggaaatgctagaatgacttacattgtgaaacg 14
Query: 152 gaggaagta 160
|||| ||||
Sbjct: 13 gaggtagta 5
>RF00906;MIR1122;AC093953.2/28747-28908 39947:Oryza sativa Japonica
Group
Length = 162
Score = 89.7 bits (45), Expect = 1e-17
Identities = 66/73 (90%)
Strand = Plus / Plus
Query: 49 acattcatattgaagttaatgaatgtagacatatatatgtatgtagattcattaacatca 108
|||||||||| || |||||||||| ||||||||||| ||| | ||||||||||||||||
Sbjct: 47 acattcatatagatgttaatgaatctagacatatatgtgtgtttagattcattaacatct 106
Query: 109 atatgaatgtgga 121
|||||||||||||
Sbjct: 107 atatgaatgtgga 119
Score = 87.7 bits (44), Expect = 4e-17
Identities = 98/116 (84%)
Strand = Plus / Minus
Query: 47 ccacattcatattgaagttaatgaatgtagacatatatatgtatgtagattcattaacat 106
|||||||||||| || |||||||||| || ||| | |||| | | |||||||||||||||
Sbjct: 118 ccacattcatatagatgttaatgaatctaaacacacatatatgtctagattcattaacat 59
Query: 107 caatatgaatgtggagaatgctgaaatgacttacattgtgaaatggaggaagtatg 162
| |||||||||| || |||||| || | |||||||| ||||| ||||||||||||
Sbjct: 58 ctatatgaatgtagacaatgctagaaagtcttacattatgaaacggaggaagtatg 3
>RF00906;MIR1122;AC210492.2/95445-95606 4538:Oryza glaberrima
(African rice)
Length = 162
Score = 89.7 bits (45), Expect = 1e-17
Identities = 102/121 (84%)
Strand = Plus / Plus
Query: 40 gcatttcccacattcatattgaagttaatgaatgtagacatatatatgtatgtagattca 99
||||| |||||||||| || || | |||||||| |||||| ||||| |||| ||||||||
Sbjct: 38 gcattgcccacattcacatagatgctaatgaatctagacacatataagtatatagattca 97
Query: 100 ttaacatcaatatgaatgtggagaatgctgaaatgacttacattgtgaaatggaggaagt 159
|||||||| ||||||||| || |||||| || | |||||||||||||| ||||| |||
Sbjct: 98 ttaacatctatatgaatgcgggcaatgctagaaagtcttacattgtgaaacggagggagt 157
Query: 160 a 160
|
Sbjct: 158 a 158
Score = 67.9 bits (34), Expect = 4e-11
Identities = 124/154 (80%)
Strand = Plus / Minus
Query: 7 tactccctccagttcacaatttaagtcagtgtggcatttcccacattcatattgaagtta 66
|||||||||| |||||||| |||| | | | ||||| ||| ||||||||| || ||||
Sbjct: 158 tactccctccgtttcacaatgtaagactttctagcattgcccgcattcatatagatgtta 99
Query: 67 atgaatgtagacatatatatgtatgtagattcattaacatcaatatgaatgtggagaatg 126
|||||| || | | ||||||| | ||||||||||| |||| || ||||||||| ||||
Sbjct: 98 atgaatctatatacttatatgtgtctagattcattagcatctatgtgaatgtgggcaatg 39
Query: 127 ctgaaatgacttacattgtgaaatggaggaagta 160
|| || | |||||||| ||||| ||||||||||
Sbjct: 38 ctagaaagtcttacattatgaaacggaggaagta 5
>RF00906;MIR1122;AACV01011709.1/17498-17659 39947:Oryza sativa
Japonica Group
Length = 162
Score = 89.7 bits (45), Expect = 1e-17
Identities = 96/113 (84%)
Strand = Plus / Plus
Query: 48 cacattcatattgaagttaatgaatgtagacatatatatgtatgtagattcattaacatc 107
||||||||||| || |||||||||| |||||| | |||| ||| ||||||||||||||||
Sbjct: 46 cacattcatatagatgttaatgaatctagacacacatatatatctagattcattaacatc 105
Query: 108 aatatgaatgtggagaatgctgaaatgacttacattgtgaaatggaggaagta 160
|| ||||||||| |||| | ||| | |||||||||||||| ||||| ||||
Sbjct: 106 tatgtgaatgtgggcaatgttaaaaagtcttacattgtgaaacggagggagta 158
Score = 79.8 bits (40), Expect = 1e-14
Identities = 100/120 (83%)
Strand = Plus / Minus
Query: 41 catttcccacattcatattgaagttaatgaatgtagacatatatatgtatgtagattcat 100
|||| |||||||||| || || |||||||||| |||| |||||| ||| | |||||||||
Sbjct: 124 cattgcccacattcacatagatgttaatgaatctagatatatatgtgtgtctagattcat 65
Query: 101 taacatcaatatgaatgtggagaatgctgaaatgacttacattgtgaaatggaggaagta 160
||||||| ||||||||||| |||||| | | |||||||||||||| ||||| ||||
Sbjct: 64 taacatctatatgaatgtgagcaatgctaggaagtcttacattgtgaaacggagggagta 5
>RF00906;MIR1122;AP000570.1/734-847 39947:Oryza sativa Japonica
Group
Length = 114
Score = 89.7 bits (45), Expect = 1e-17
Identities = 66/73 (90%)
Strand = Plus / Minus
Query: 48 cacattcatattgaagttaatgaatgtagacatatatatgtatgtagattcattaacatc 107
||||||||||| || || ||||||| ||||||||||||||| | ||||||||||||||||
Sbjct: 93 cacattcatatagatgtaaatgaatctagacatatatatgtgtctagattcattaacatc 34
Query: 108 aatatgaatgtgg 120
||||||||||||
Sbjct: 33 tatatgaatgtgg 21
Score = 75.8 bits (38), Expect = 2e-13
Identities = 65/74 (87%)
Strand = Plus / Plus
Query: 46 cccacattcatattgaagttaatgaatgtagacatatatatgtatgtagattcattaaca 105
||||||||||||| || |||||||||| |||||| |||||| | | |||||||||| |||
Sbjct: 20 cccacattcatatagatgttaatgaatctagacacatatatatgtctagattcatttaca 79
Query: 106 tcaatatgaatgtg 119
|| |||||||||||
Sbjct: 80 tctatatgaatgtg 93
>RF00906;MIR1122;AAAA02031701.1/6482-6608 39946:Oryza sativa Indica
Group
Length = 127
Score = 87.7 bits (44), Expect = 4e-17
Identities = 59/64 (92%)
Strand = Plus / Minus
Query: 97 tcattaacatcaatatgaatgtggagaatgctgaaatgacttacattgtgaaatggagga 156
||||||||||||||||||||||||| | |||| |||||||||||||| ||||| ||||||
Sbjct: 68 tcattaacatcaatatgaatgtggaaagtgctaaaatgacttacattatgaaacggagga 9
Query: 157 agta 160
||||
Sbjct: 8 agta 5
Score = 50.1 bits (25), Expect = 1e-05
Identities = 40/45 (88%)
Strand = Plus / Plus
Query: 105 atcaatatgaatgtggagaatgctgaaatgacttacattgtgaaa 149
|||||||||||||||| | |||| |||||||||||||||||||
Sbjct: 68 atcaatatgaatgtgggaagtgctagaatgacttacattgtgaaa 112
Score = 46.1 bits (23), Expect = 2e-04
Identities = 38/43 (88%)
Strand = Plus / Minus
Query: 19 ttcacaatttaagtcagtgtggcatttcccacattcatattga 61
|||||||| ||||||| | | ||| ||||||||||||||||||
Sbjct: 111 ttcacaatgtaagtcattctagcacttcccacattcatattga 69
>RF00906;MIR1122;AP004562.3/125584-125444 39947:Oryza sativa
Japonica Group
Length = 141
Score = 87.7 bits (44), Expect = 4e-17
Identities = 62/68 (91%)
Strand = Plus / Minus
Query: 93 agattcattaacatcaatatgaatgtggagaatgctgaaatgacttacattgtgaaatgg 152
|||||||||| ||||||||||||||||| |||||| ||||||||||||||||||| ||
Sbjct: 72 agattcattaccatcaatatgaatgtgggaaatgctagaatgacttacattgtgaaacgg 13
Query: 153 aggaagta 160
||||||||
Sbjct: 12 aggaagta 5
Score = 67.9 bits (34), Expect = 4e-11
Identities = 55/62 (88%)
Strand = Plus / Plus
Query: 99 attaacatcaatatgaatgtggagaatgctgaaatgacttacattgtgaaatggaggaag 158
|||||||||||||||||||||| |||||| |||||||||| |||||||| ||||| ||
Sbjct: 76 attaacatcaatatgaatgtgggaaatgctagaatgacttactttgtgaaacggagggag 135
Query: 159 ta 160
||
Sbjct: 136 ta 137
Score = 63.9 bits (32), Expect = 6e-10
Identities = 56/64 (87%)
Strand = Plus / Minus
Query: 5 tgtactccctccagttcacaatttaagtcagtgtggcatttcccacattcatattgaagt 64
|||||||||||| ||||||| ||||||| | | |||||||||||||||||||||| ||
Sbjct: 139 tgtactccctccgtttcacaaagtaagtcattctagcatttcccacattcatattgatgt 80
Query: 65 taat 68
||||
Sbjct: 79 taat 76
Score = 60.0 bits (30), Expect = 1e-08
Identities = 48/54 (88%)
Strand = Plus / Plus
Query: 19 ttcacaatttaagtcagtgtggcatttcccacattcatattgaagttaatgaat 72
|||||||| ||||||| | | |||||||||||||||||||||| | ||||||||
Sbjct: 17 ttcacaatgtaagtcattctagcatttcccacattcatattgatggtaatgaat 70
>RF00906;MIR1122;AAAA02005426.1/1175-1330 39946:Oryza sativa Indica
Group
Length = 156
Score = 87.7 bits (44), Expect = 4e-17
Identities = 127/155 (81%), Gaps = 6/155 (3%)
Strand = Plus / Minus
Query: 6 gtactccctccagttcacaatttaagtcagtgtggcatttcccacattcatattgaagtt 65
||||| ||||| |||||||| ||||||| | | |||||| ||| ||||||||||| ||
Sbjct: 153 gtacttcctccgtttcacaatgtaagtcattctagcattttccatattcatattgatgt- 95
Query: 66 aatgaatgtagacatatatatgtatgtagattcattaacatcaatatgaatgtggagaat 125
|| ||||||||| ||| ||| || | ||||||||||| ||||||||||||| |||
Sbjct: 94 -----atctagacatatgtatctatctaaactcattaacatcgatatgaatgtggaaaat 40
Query: 126 gctgaaatgacttacattgtgaaatggaggaagta 160
||| ||||||||||||||||||| ||||| ||||
Sbjct: 39 gctagaatgacttacattgtgaaacggagggagta 5
Score = 85.7 bits (43), Expect = 2e-16
Identities = 126/154 (81%), Gaps = 6/154 (3%)
Strand = Plus / Plus
Query: 7 tactccctccagttcacaatttaagtcagtgtggcatttcccacattcatattgaagtta 66
|||||||||| |||||||| ||||||| | | |||||| |||||||||||| || ||||
Sbjct: 5 tactccctccgtttcacaatgtaagtcattctagcattttccacattcatatcgatgtta 64
Query: 67 atgaatgtagacatatatatgtatgtagattcattaacatcaatatgaatgtggagaatg 126
|||| | |||| | ||| || | | ||||| |||||||||||||| |||| ||||
Sbjct: 65 atgagtttagatagatacatatgtctagat------acatcaatatgaatatggaaaatg 118
Query: 127 ctgaaatgacttacattgtgaaatggaggaagta 160
|| ||||||||||||||||||| ||||||||||
Sbjct: 119 ctagaatgacttacattgtgaaacggaggaagta 152
>RF00906;MIR1122;AP005694.3/90268-90429 39947:Oryza sativa Japonica
Group
Length = 162
Score = 87.7 bits (44), Expect = 4e-17
Identities = 98/116 (84%)
Strand = Plus / Plus
Query: 46 cccacattcatattgaagttaatgaatgtagacatatatatgtatgtagattcattaaca 105
|||| |||||||| || ||||||||| |||| ||||| || | | ||||||||||||||
Sbjct: 44 cccatattcatatagatgttaatgaacctagatatatacatatgtctagattcattaaca 103
Query: 106 tcaatatgaatgtggagaatgctgaaatgacttacattgtgaaatggaggaagtat 161
|| ||||||||||||| ||| || ||| | |||||||||||||| ||||| |||||
Sbjct: 104 tctatatgaatgtggacaatcctaaaaagtcttacattgtgaaacggagggagtat 159
Score = 75.8 bits (38), Expect = 2e-13
Identities = 62/70 (88%)
Strand = Plus / Minus
Query: 47 ccacattcatattgaagttaatgaatgtagacatatatatgtatgtagattcattaacat 106
|||||||||||| || |||||||||| ||||||||| ||| ||| ||| |||||||||||
Sbjct: 118 ccacattcatatagatgttaatgaatctagacatatgtatatatctaggttcattaacat 59
Query: 107 caatatgaat 116
| ||||||||
Sbjct: 58 ctatatgaat 49
>RF00906;MIR1122;AAAA02022591.1/58916-58767 39946:Oryza sativa
Indica Group
Length = 150
Score = 87.7 bits (44), Expect = 4e-17
Identities = 65/72 (90%)
Strand = Plus / Minus
Query: 92 tagattcattaacatcaatatgaatgtggagaatgctgaaatgacttacattgtgaaatg 151
|||||||||||||||||||||||||||| |||||| ||||||||||||||||||| |
Sbjct: 73 tagattcattaacatcaatatgaatgtgagaaatgctagaatgacttacattgtgaaacg 14
Query: 152 gaggaagtatgt 163
|| |||||||||
Sbjct: 13 gaagaagtatgt 2
Score = 83.8 bits (42), Expect = 7e-16
Identities = 116/143 (81%), Gaps = 12/143 (8%)
Strand = Plus / Plus
Query: 19 ttcacaatttaagtcagtgtggcatttcccacattcatattgaagttaatgaatgtagac 78
|||||||| ||||||| | | ||||||| |||||||||||||| |||||||||| ||||
Sbjct: 17 ttcacaatgtaagtcattctagcatttctcacattcatattgatgttaatgaatctaga- 75
Query: 79 atatatatgtatgtagattcattaacatcaatatgaatgtggagaatgctgaaatgactt 138
|||||||||||||| |||||||| ||| |||| |||||| ||||||||
Sbjct: 76 -----------tgtagattcattaatatcaatataaatatggaaaatgctagaatgactt 124
Query: 139 acattgtgaaatggaggaagtat 161
||||||||||| ||||| |||||
Sbjct: 125 acattgtgaaacggagggagtat 147
>RF00906;MIR1122;AP003833.3/128680-128531 39947:Oryza sativa
Japonica Group
Length = 150
Score = 87.7 bits (44), Expect = 4e-17
Identities = 65/72 (90%)
Strand = Plus / Minus
Query: 92 tagattcattaacatcaatatgaatgtggagaatgctgaaatgacttacattgtgaaatg 151
|||||||||||||||||||||||||||| |||||| ||||||||||||||||||| |
Sbjct: 73 tagattcattaacatcaatatgaatgtgagaaatgctagaatgacttacattgtgaaacg 14
Query: 152 gaggaagtatgt 163
|| |||||||||
Sbjct: 13 gaagaagtatgt 2
Score = 83.8 bits (42), Expect = 7e-16
Identities = 116/143 (81%), Gaps = 12/143 (8%)
Strand = Plus / Plus
Query: 19 ttcacaatttaagtcagtgtggcatttcccacattcatattgaagttaatgaatgtagac 78
|||||||| ||||||| | | ||||||| |||||||||||||| |||||||||| ||||
Sbjct: 17 ttcacaatgtaagtcattctagcatttctcacattcatattgatgttaatgaatctaga- 75
Query: 79 atatatatgtatgtagattcattaacatcaatatgaatgtggagaatgctgaaatgactt 138
|||||||||||||| |||||||| ||| |||| |||||| ||||||||
Sbjct: 76 -----------tgtagattcattaatatcaatataaatatggaaaatgctataatgactt 124
Query: 139 acattgtgaaatggaggaagtat 161
||||||||||| ||||| |||||
Sbjct: 125 acattgtgaaacggagggagtat 147
>RF00906;MIR1122;AP008208.1/10509261-10509100 39947:Oryza sativa
Japonica Group
Length = 162
Score = 87.7 bits (44), Expect = 4e-17
Identities = 98/116 (84%)
Strand = Plus / Minus
Query: 46 cccacattcatattgaagttaatgaatgtagacatatatatgtatgtagattcattaaca 105
|||| |||||||| || ||||||||| |||| ||||| || | | ||||||||||||||
Sbjct: 119 cccatattcatatagatgttaatgaacctagatatatacatatgtctagattcattaaca 60
Query: 106 tcaatatgaatgtggagaatgctgaaatgacttacattgtgaaatggaggaagtat 161
|| ||||||||||||| ||| || ||| | |||||||||||||| ||||| |||||
Sbjct: 59 tctatatgaatgtggacaatcctaaaaagtcttacattgtgaaacggagggagtat 4
Score = 75.8 bits (38), Expect = 2e-13
Identities = 62/70 (88%)
Strand = Plus / Plus
Query: 47 ccacattcatattgaagttaatgaatgtagacatatatatgtatgtagattcattaacat 106
|||||||||||| || |||||||||| ||||||||| ||| ||| ||| |||||||||||
Sbjct: 45 ccacattcatatagatgttaatgaatctagacatatgtatatatctaggttcattaacat 104
Query: 107 caatatgaat 116
| ||||||||
Sbjct: 105 ctatatgaat 114
>RF00906;MIR1122;AP004258.3/156327-156194 39947:Oryza sativa
Japonica Group
Length = 134
Score = 87.7 bits (44), Expect = 4e-17
Identities = 62/68 (91%)
Strand = Plus / Plus
Query: 97 tcattaacatcaatatgaatgtggagaatgctgaaatgacttacattgtgaaatggagga 156
||||||||||| |||||||||||| |||||| ||||||||||||||||||| ||||||
Sbjct: 67 tcattaacatcgatatgaatgtgggaaatgctagaatgacttacattgtgaaacggagga 126
Query: 157 agtatgta 164
||||||||
Sbjct: 127 agtatgta 134
Score = 65.9 bits (33), Expect = 2e-10
Identities = 54/61 (88%)
Strand = Plus / Minus
Query: 100 ttaacatcaatatgaatgtggagaatgctgaaatgacttacattgtgaaatggaggaagt 159
|||||||| |||||||||||| |||||| ||||||||||||||||||| ||||| |||
Sbjct: 65 ttaacatcgatatgaatgtgggaaatgctagaatgacttacattgtgaaacggagggagt 6
Query: 160 a 160
|
Sbjct: 5 a 5
Score = 61.9 bits (31), Expect = 3e-09
Identities = 55/63 (87%)
Strand = Plus / Plus
Query: 5 tgtactccctccagttcacaatttaagtcagtgtggcatttcccacattcatattgaagt 64
|||||||||||| |||||||| ||||||| | | ||||||||||||||||||| || ||
Sbjct: 3 tgtactccctccgtttcacaatgtaagtcattctagcatttcccacattcatatcgatgt 62
Query: 65 taa 67
|||
Sbjct: 63 taa 65
Score = 56.0 bits (28), Expect = 2e-07
Identities = 46/52 (88%)
Strand = Plus / Minus
Query: 19 ttcacaatttaagtcagtgtggcatttcccacattcatattgaagttaatga 70
|||||||| ||||||| | | ||||||||||||||||||| || ||||||||
Sbjct: 118 ttcacaatgtaagtcattctagcatttcccacattcatatcgatgttaatga 67
>RF00906;MIR1122;AP005764.5/63055-63194 39947:Oryza sativa Japonica
Group
Length = 140
Score = 85.7 bits (43), Expect = 2e-16
Identities = 61/67 (91%)
Strand = Plus / Minus
Query: 95 attcattaacatcaatatgaatgtggagaatgctgaaatgacttacattgtgaaatggag 154
|||||||||||||||||||||| |||| |||| | ||||||||||||||||||| ||||
Sbjct: 70 attcattaacatcaatatgaatatggaaaatgttagaatgacttacattgtgaaacggag 11
Query: 155 gaagtat 161
|||||||
Sbjct: 10 gaagtat 4
Score = 54.0 bits (27), Expect = 6e-07
Identities = 51/59 (86%)
Strand = Plus / Plus
Query: 19 ttcacaatttaagtcagtgtggcatttcccacattcatattgaagttaatgaatgtaga 77
|||||||| ||||||| | | ||||| ||| ||||||||||| |||||||||||||||
Sbjct: 17 ttcacaatgtaagtcattctaacattttccatattcatattgatgttaatgaatgtaga 75
Score = 50.1 bits (25), Expect = 1e-05
Identities = 49/57 (85%)
Strand = Plus / Plus
Query: 104 catcaatatgaatgtggagaatgctgaaatgacttacattgtgaaatggaggaagta 160
||||||||||||| || | ||| || |||||||||||||| ||||| ||||| ||||
Sbjct: 80 catcaatatgaatatgaaaaatactaaaatgacttacattatgaaacggagggagta 136
>RF00906;MIR1122;AP004694.3/155364-155519 39947:Oryza sativa
Japonica Group
Length = 156
Score = 85.7 bits (43), Expect = 2e-16
Identities = 126/154 (81%), Gaps = 6/154 (3%)
Strand = Plus / Minus
Query: 7 tactccctccagttcacaatttaagtcagtgtggcatttcccacattcatattgaagtta 66
|||||||||| |||||||| ||||||| | | |||||| ||||||| ||||||| | ||
Sbjct: 152 tactccctccgtttcacaatataagtcattttagcattttccacatttatattgatgcta 93
Query: 67 atgaatgtagacatatatatgtatgtagattcattaacatcaatatgaatgtggagaatg 126
|||||| |||| |||||| | | |||||||| ||||||| | |||||| ||||
Sbjct: 92 atgaatctagagatatatct------aaattcattagcatcaatgtaaatgtgagaaatg 39
Query: 127 ctgaaatgacttacattgtgaaatggaggaagta 160
|| |||||||||||||||||||| ||||||||||
Sbjct: 38 ctaaaatgacttacattgtgaaacggaggaagta 5
Score = 85.7 bits (43), Expect = 2e-16
Identities = 64/71 (90%)
Strand = Plus / Plus
Query: 92 tagattcattaacatcaatatgaatgtggagaatgctgaaatgacttacattgtgaaatg 151
||||||||||| ||||||||| |||||||| |||||| |||||||||| ||||||||| |
Sbjct: 84 tagattcattagcatcaatataaatgtggaaaatgctaaaatgacttatattgtgaaacg 143
Query: 152 gaggaagtatg 162
|||| ||||||
Sbjct: 144 gagggagtatg 154
>RF00906;MIR1122;AP004801.3/81541-81678 39947:Oryza sativa Japonica
Group
Length = 138
Score = 85.7 bits (43), Expect = 2e-16
Identities = 73/83 (87%)
Strand = Plus / Plus
Query: 78 catatatatgtatgtagattcattaacatcaatatgaatgtggagaatgctgaaatgact 137
||||||||| || ||||||||||||||| ||||||||| |||| |||||| || ||||
Sbjct: 52 catatatattcatctagattcattaacattaatatgaatatggaaaatgctagaaggact 111
Query: 138 tacattgtgaaatggaggaagta 160
|||||||||||| ||||||||||
Sbjct: 112 tacattgtgaaacggaggaagta 134
Score = 48.1 bits (24), Expect = 4e-05
Identities = 45/52 (86%)
Strand = Plus / Minus
Query: 109 atatgaatgtggagaatgctgaaatgacttacattgtgaaatggaggaagta 160
||||||||||||| |||| | ||||||||||||| ||||| ||||| ||||
Sbjct: 56 atatgaatgtggaaaatgatagaatgacttacattatgaaacggagggagta 5
>RF00906;MIR1122;AAAA02022147.1/7740-7901 39946:Oryza sativa Indica
Group
Length = 162
Score = 83.8 bits (42), Expect = 7e-16
Identities = 126/154 (81%)
Strand = Plus / Minus
Query: 7 tactccctccagttcacaatttaagtcagtgtggcatttcccacattcatattgaagtta 66
|||||||||| |||||||| |||| | | | ||||| |||| |||||| | || | ||
Sbjct: 158 tactccctccgtttcacaatgtaagactttctagcattgcccaaattcatttagatgcta 99
Query: 67 atgaatgtagacatatatatgtatgtagattcattaacatcaatatgaatgtggagaatg 126
|||||| ||||||||| ||||| | ||||||||||||||| ||||| |||||| ||||
Sbjct: 98 atgaatctagacatatgtatgtgtttagattcattaacatttatatgtatgtgggcaatg 39
Query: 127 ctgaaatgacttacattgtgaaatggaggaagta 160
|| || | |||||||||||||| ||||||||||
Sbjct: 38 ctagaaagtcttacattgtgaaacggaggaagta 5
Score = 52.0 bits (26), Expect = 2e-06
Identities = 98/122 (80%)
Strand = Plus / Plus
Query: 40 gcatttcccacattcatattgaagttaatgaatgtagacatatatatgtatgtagattca 99
||||| ||||||| ||||| | |||||||||| || ||| ||| || | | ||||||||
Sbjct: 38 gcattgcccacatacatataaatgttaatgaatctaaacacatacatatgtctagattca 97
Query: 100 ttaacatcaatatgaatgtggagaatgctgaaatgacttacattgtgaaatggaggaagt 159
||| |||| | |||||| ||| |||||| || | |||||||||||||| ||||| |||
Sbjct: 98 ttagcatctaaatgaatttgggcaatgctagaaagtcttacattgtgaaacggagggagt 157
Query: 160 at 161
||
Sbjct: 158 at 159
>RF00906;MIR1122;AAAA02005623.1/56801-56936 39946:Oryza sativa
Indica Group
Length = 136
Score = 83.8 bits (42), Expect = 7e-16
Identities = 63/70 (90%)
Strand = Plus / Plus
Query: 92 tagattcattaacatcaatatgaatgtggagaatgctgaaatgacttacattgtgaaatg 151
|||||||||||||||| ||||||||||| |||||| ||||||||||||| |||||||
Sbjct: 64 tagattcattaacatctatatgaatgtgtgcaatgctagaatgacttacattatgaaatg 123
Query: 152 gaggaagtat 161
||||||||||
Sbjct: 124 gaggaagtat 133
Score = 65.9 bits (33), Expect = 2e-10
Identities = 69/81 (85%)
Strand = Plus / Minus
Query: 7 tactccctccagttcacaatttaagtcagtgtggcatttcccacattcatattgaagtta 66
|||| |||||| |||| ||| ||||||| | | ||||| | ||||||||||| || ||||
Sbjct: 132 tacttcctccatttcataatgtaagtcattctagcattgcacacattcatatagatgtta 73
Query: 67 atgaatgtagacatatatatg 87
|||||| ||||||||||||||
Sbjct: 72 atgaatctagacatatatatg 52
>RF00906;MIR1122;AP003256.3/164903-165020 39947:Oryza sativa
Japonica Group
Length = 118
Score = 83.8 bits (42), Expect = 7e-16
Identities = 60/66 (90%)
Strand = Plus / Plus
Query: 95 attcattaacatcaatatgaatgtggagaatgctgaaatgacttacattgtgaaatggag 154
|||||||||||||||||||||||| | |||||| ||||||||||||||||||| ||||
Sbjct: 49 attcattaacatcaatatgaatgtaggaaatgctagaatgacttacattgtgaaacggag 108
Query: 155 gaagta 160
||||||
Sbjct: 109 gaagta 114
Score = 63.9 bits (32), Expect = 6e-10
Identities = 50/56 (89%)
Strand = Plus / Minus
Query: 19 ttcacaatttaagtcagtgtggcatttcccacattcatattgaagttaatgaatgt 74
|||||||| ||||||| | | |||||||| ||||||||||||| ||||||||||||
Sbjct: 102 ttcacaatgtaagtcattctagcatttcctacattcatattgatgttaatgaatgt 47
Score = 54.0 bits (27), Expect = 6e-07
Identities = 45/51 (88%)
Strand = Plus / Plus
Query: 6 gtactccctccagttcacaatttaagtcagtgtggcatttcccacattcat 56
||||||||||| |||||||| ||||||| | | |||||||||||||||||
Sbjct: 4 gtactccctccgtttcacaatgtaagtcattctagcatttcccacattcat 54
Score = 52.0 bits (26), Expect = 2e-06
Identities = 44/50 (88%)
Strand = Plus / Minus
Query: 111 atgaatgtggagaatgctgaaatgacttacattgtgaaatggaggaagta 160
|||||||||| |||||| ||||||||||||||||||| ||||| ||||
Sbjct: 54 atgaatgtgggaaatgctagaatgacttacattgtgaaacggagggagta 5
>RF00906;MIR1122;AACV01004867.1/28532-28374 39947:Oryza sativa
Japonica Group
Length = 159
Score = 83.8 bits (42), Expect = 7e-16
Identities = 101/120 (84%), Gaps = 3/120 (2%)
Strand = Plus / Minus
Query: 41 catttcccacattcatattgaagttaatgaatgtagacatatatatgtatgtagattcat 100
||||||||||||||||||||| | |||| || ||||| ||||| ||| |||||||||
Sbjct: 121 catttcccacattcatattgatgccaatggatctagac---tatatctatctagattcat 65
Query: 101 taacatcaatatgaatgtggagaatgctgaaatgacttacattgtgaaatggaggaagta 160
|| |||||||||||||||| ||| || ||||||||| ||||||||| ||||||||||
Sbjct: 64 tagtatcaatatgaatgtgggaaatactagaatgacttatattgtgaaacggaggaagta 5
Score = 71.9 bits (36), Expect = 3e-12
Identities = 116/142 (81%), Gaps = 3/142 (2%)
Strand = Plus / Plus
Query: 19 ttcacaatttaagtcagtgtggcatttcccacattcatattgaagttaatgaatgtagac 78
|||||||| ||||||| | | | |||||||||||||||||||| |||||||| ||||
Sbjct: 17 ttcacaatataagtcattctagtatttcccacattcatattgatactaatgaatctagat 76
Query: 79 atatatatgtatgtagattcattaacatcaatatgaatgtggagaatgctgaaatgactt 138
| ||||| | ||||| |||| ||||||||||||||||| |||| || ||||||||
Sbjct: 77 agatatag---tctagatccattggcatcaatatgaatgtgggaaatggtggaatgactt 133
Query: 139 acattgtgaaatggaggaagta 160
||||| ||||| ||||| ||||
Sbjct: 134 acattatgaaacggagggagta 155
>RF00906;MIR1122;AACV01021945.1/10278-10160 39947:Oryza sativa
Japonica Group
Length = 119
Score = 83.8 bits (42), Expect = 7e-16
Identities = 63/70 (90%)
Strand = Plus / Plus
Query: 92 tagattcattaacatcaatatgaatgtggagaatgctgaaatgacttacattgtgaaatg 151
|||||||||||| |||||||||||||||| |||||| ||||||||||||| ||||| |
Sbjct: 47 tagattcattaatatcaatatgaatgtgggaaatgctagaatgacttacattatgaaacg 106
Query: 152 gaggaagtat 161
||||||||||
Sbjct: 107 gaggaagtat 116
Score = 56.0 bits (28), Expect = 2e-07
Identities = 55/64 (85%)
Strand = Plus / Minus
Query: 19 ttcacaatttaagtcagtgtggcatttcccacattcatattgaagttaatgaatgtagac 78
|||| ||| ||||||| | | |||||||||||||||||||||| ||||||||| ||||
Sbjct: 103 ttcataatgtaagtcattctagcatttcccacattcatattgatattaatgaatctagat 44
Query: 79 atat 82
||||
Sbjct: 43 atat 40
Score = 44.1 bits (22), Expect = 6e-04
Identities = 28/30 (93%)
Strand = Plus / Minus
Query: 131 aatgacttacattgtgaaatggaggaagta 160
||||||||||||||||||| ||||| ||||
Sbjct: 34 aatgacttacattgtgaaacggagggagta 5
>RF00906;MIR1122;AAAA02014478.1/30664-30503 39946:Oryza sativa
Indica Group
Length = 162
Score = 83.8 bits (42), Expect = 7e-16
Identities = 102/122 (83%)
Strand = Plus / Plus
Query: 40 gcatttcccacattcatattgaagttaatgaatgtagacatatatatgtatgtagattca 99
||||| |||| |||||| | || |||||||||| ||||||||| ||||||| ||||||||
Sbjct: 38 gcattgcccatattcatttagatgttaatgaatctagacatatgtatgtatttagattca 97
Query: 100 ttaacatcaatatgaatgtggagaatgctgaaatgacttacattgtgaaatggaggaagt 159
|||||||| ||||| | |||| ||| || || | |||||||||||||| ||||| |||
Sbjct: 98 ttaacatccatatgtacgtgggcaatactagaaagtcttacattgtgaaacggagggagt 157
Query: 160 at 161
||
Sbjct: 158 at 159
Score = 58.0 bits (29), Expect = 4e-08
Identities = 59/69 (85%)
Strand = Plus / Minus
Query: 92 tagattcattaacatcaatatgaatgtggagaatgctgaaatgacttacattgtgaaatg 151
|||||||||||||||| | |||||| ||| |||||| || | |||||||||||||| |
Sbjct: 73 tagattcattaacatctaaatgaatatgggcaatgctagaaagtcttacattgtgaaacg 14
Query: 152 gaggaagta 160
|||||||||
Sbjct: 13 gaggaagta 5
>RF00906;MIR1122;AACV01001798.1/30232-30103 39947:Oryza sativa
Japonica Group
Length = 130
Score = 83.8 bits (42), Expect = 7e-16
Identities = 54/58 (93%)
Strand = Plus / Plus
Query: 92 tagattcattaacatcaatatgaatgtggagaatgctgaaatgacttacattgtgaaa 149
||||||||||||||||||||||||||||| |||||| |||||||||||||||||||
Sbjct: 62 tagattcattaacatcaatatgaatgtgggaaatgctagaatgacttacattgtgaaa 119
Score = 75.8 bits (38), Expect = 2e-13
Identities = 56/62 (90%)
Strand = Plus / Minus
Query: 99 attaacatcaatatgaatgtggagaatgctgaaatgacttacattgtgaaatggaggaag 158
||||||||||||||||||||||| |||||| ||||||||| ||||||||| |||||||
Sbjct: 62 attaacatcaatatgaatgtggaaaatgctataatgacttatattgtgaaacagaggaag 3
Query: 159 ta 160
||
Sbjct: 2 ta 1
Score = 67.9 bits (34), Expect = 4e-11
Identities = 49/54 (90%)
Strand = Plus / Minus
Query: 19 ttcacaatttaagtcagtgtggcatttcccacattcatattgaagttaatgaat 72
|||||||| ||||||| | | |||||||||||||||||||||| ||||||||||
Sbjct: 118 ttcacaatgtaagtcattctagcatttcccacattcatattgatgttaatgaat 65
Score = 52.0 bits (26), Expect = 2e-06
Identities = 44/50 (88%)
Strand = Plus / Plus
Query: 19 ttcacaatttaagtcagtgtggcatttcccacattcatattgaagttaat 68
|||||||| ||||||| | | |||||| ||||||||||||||| ||||||
Sbjct: 13 ttcacaatataagtcattatagcattttccacattcatattgatgttaat 62
>RF00906;MIR1122;AAAA02026649.1/23180-23037 39946:Oryza sativa
Indica Group
Length = 144
Score = 83.8 bits (42), Expect = 7e-16
Identities = 63/70 (90%)
Strand = Plus / Plus
Query: 92 tagattcattaacatcaatatgaatgtggagaatgctgaaatgacttacattgtgaaatg 151
||||||||||||||||||||||||| ||| |||||| ||||||||||||| ||||| |
Sbjct: 72 tagattcattaacatcaatatgaatatgggaaatgctagaatgacttacattatgaaacg 131
Query: 152 gaggaagtat 161
||||||||||
Sbjct: 132 gaggaagtat 141
Score = 81.8 bits (41), Expect = 3e-15
Identities = 62/69 (89%)
Strand = Plus / Minus
Query: 92 tagattcattaacatcaatatgaatgtggagaatgctgaaatgacttacattgtgaaatg 151
||||||||||||||||||||||||| ||| |||||| ||||||||||||||||||| |
Sbjct: 73 tagattcattaacatcaatatgaatatgggaaatgctagaatgacttacattgtgaaacg 14
Query: 152 gaggaagta 160
|||| ||||
Sbjct: 13 gagggagta 5
Score = 71.9 bits (36), Expect = 3e-12
Identities = 63/72 (87%)
Strand = Plus / Plus
Query: 6 gtactccctccagttcacaatttaagtcagtgtggcatttcccacattcatattgaagtt 65
||||||||||| |||||||| ||||||| | | |||||||||| ||||||||||| |||
Sbjct: 4 gtactccctccgtttcacaatgtaagtcattctagcatttcccatattcatattgatgtt 63
Query: 66 aatgaatgtaga 77
||||||| ||||
Sbjct: 64 aatgaatctaga 75
Score = 54.0 bits (27), Expect = 6e-07
Identities = 51/59 (86%)
Strand = Plus / Minus
Query: 19 ttcacaatttaagtcagtgtggcatttcccacattcatattgaagttaatgaatgtaga 77
|||| ||| ||||||| | | |||||||||| ||||||||||| |||||||||| ||||
Sbjct: 128 ttcataatgtaagtcattctagcatttcccatattcatattgatgttaatgaatctaga 70
>RF00906;MIR1122;AAAA02030781.1/9759-9620 39946:Oryza sativa Indica
Group
Length = 140
Score = 83.8 bits (42), Expect = 7e-16
Identities = 63/70 (90%)
Strand = Plus / Plus
Query: 92 tagattcattaacatcaatatgaatgtggagaatgctgaaatgacttacattgtgaaatg 151
|||||| |||||||||||||||||| ||| |||||| ||||||||| |||||||||| |
Sbjct: 68 tagatttattaacatcaatatgaatatgggaaatgctaaaatgacttgcattgtgaaacg 127
Query: 152 gaggaagtat 161
||||||||||
Sbjct: 128 gaggaagtat 137
Score = 54.0 bits (27), Expect = 6e-07
Identities = 57/67 (85%)
Strand = Plus / Minus
Query: 19 ttcacaatttaagtcagtgtggcatttcccacattcatattgaagttaatgaatgtagac 78
|||||||| |||||| | | |||||||||| ||||||||||| |||||| ||| |||||
Sbjct: 124 ttcacaatgcaagtcattttagcatttcccatattcatattgatgttaataaatctagac 65
Query: 79 atatata 85
|| ||||
Sbjct: 64 atttata 58
Score = 44.1 bits (22), Expect = 6e-04
Identities = 25/26 (96%)
Strand = Plus / Minus
Query: 135 acttacattgtgaaatggaggaagta 160
||||||||||||||| ||||||||||
Sbjct: 30 acttacattgtgaaacggaggaagta 5
>RF00906;MIR1122;AP008217.1/8435064-8435202 39947:Oryza sativa
Japonica Group
Length = 139
Score = 83.8 bits (42), Expect = 7e-16
Identities = 63/70 (90%)
Strand = Plus / Plus
Query: 92 tagattcattaacatcaatatgaatgtggagaatgctgaaatgacttacattgtgaaatg 151
|||||||||||| || ||||||||||||| |||||| ||||||||||||||||||| |
Sbjct: 67 tagattcattaatataaatatgaatgtgggaaatgctagaatgacttacattgtgaaacg 126
Query: 152 gaggaagtat 161
||||||||||
Sbjct: 127 gaggaagtat 136
Score = 69.9 bits (35), Expect = 1e-11
Identities = 59/67 (88%)
Strand = Plus / Minus
Query: 19 ttcacaatttaagtcagtgtggcatttcccacattcatattgaagttaatgaatgtagac 78
|||||||| ||||||| | | |||||||||||||||||||| | ||||||||| |||||
Sbjct: 123 ttcacaatgtaagtcattctagcatttcccacattcatatttatattaatgaatctagac 64
Query: 79 atatata 85
|||||||
Sbjct: 63 atatata 57
Score = 67.9 bits (34), Expect = 4e-11
Identities = 49/54 (90%)
Strand = Plus / Minus
Query: 108 aatatgaatgtggagaatgctgaaatgacttacattgtgaaatggaggaagtat 161
||||||||||||| |||||| ||||||||||||||||||||||||| |||||
Sbjct: 57 aatatgaatgtgggaaatgctagaatgacttacattgtgaaatggagggagtat 4
Score = 65.9 bits (33), Expect = 2e-10
Identities = 48/53 (90%)
Strand = Plus / Plus
Query: 7 tactccctccagttcacaatttaagtcagtgtggcatttcccacattcatatt 59
||||||||||| |||||||| ||||||| | | ||||||||||||||||||||
Sbjct: 5 tactccctccatttcacaatgtaagtcattctagcatttcccacattcatatt 57
>RF00906;MIR1122;AC108504.2/79804-79643 39947:Oryza sativa Japonica
Group
Length = 162
Score = 83.8 bits (42), Expect = 7e-16
Identities = 84/98 (85%)
Strand = Plus / Minus
Query: 63 gttaatgaatgtagacatatatatgtatgtagattcattaacatcaatatgaatgtggag 122
|||||||||| ||||||||||||||| | |||||||||||||||| | ||||||||||
Sbjct: 102 gttaatgaatctagacatatatatgtgtttagattcattaacatctaaatgaatgtgggt 43
Query: 123 aatgctgaaatgacttacattgtgaaatggaggaagta 160
|||||| || | ||| |||| ||||| ||||||||||
Sbjct: 42 aatgctagaaagtcttgcattatgaaacggaggaagta 5
Score = 56.0 bits (28), Expect = 2e-07
Identities = 58/68 (85%)
Strand = Plus / Plus
Query: 40 gcatttcccacattcatattgaagttaatgaatgtagacatatatatgtatgtagattca 99
||||| ||||||||||| | || |||||||||| || ||| |||||| | | ||||||||
Sbjct: 38 gcattacccacattcatttagatgttaatgaatctaaacacatatatatgtctagattca 97
Query: 100 ttaacatc 107
||||||||
Sbjct: 98 ttaacatc 105
>RF00906;MIR1122;AC146948.2/15882-15739 39947:Oryza sativa Japonica
Group
Length = 144
Score = 83.8 bits (42), Expect = 7e-16
Identities = 69/78 (88%)
Strand = Plus / Minus
Query: 5 tgtactccctccagttcacaatttaagtcagtgtggcatttcccacattcatattgaagt 64
|||||||||||| |||||||| ||||||| | | |||||||||||||||||||||| ||
Sbjct: 142 tgtactccctccgtttcacaatataagtcattctagcatttcccacattcatattgatgt 83
Query: 65 taatgaatgtagacatat 82
|||||||| || ||||||
Sbjct: 82 taatgaatctatacatat 65
Score = 81.8 bits (41), Expect = 3e-15
Identities = 62/69 (89%)
Strand = Plus / Plus
Query: 92 tagattcattaacatcaatatgaatgtggagaatgctgaaatgacttacattgtgaaatg 151
||||||||||||||||||||||||||||| |||||| ||||||||| ||||||||| |
Sbjct: 72 tagattcattaacatcaatatgaatgtgggaaatgctagaatgacttatattgtgaaacg 131
Query: 152 gaggaagta 160
|||| ||||
Sbjct: 132 gagggagta 140
Score = 75.8 bits (38), Expect = 2e-13
Identities = 56/62 (90%)
Strand = Plus / Minus
Query: 99 attaacatcaatatgaatgtggagaatgctgaaatgacttacattgtgaaatggaggaag 158
|||||||| ||||||||||||| |||||| ||||||||||||||||||| ||||||||
Sbjct: 66 attaacattaatatgaatgtgggaaatgctagaatgacttacattgtgaaacggaggaag 7
Query: 159 ta 160
||
Sbjct: 6 ta 5
Score = 56.0 bits (28), Expect = 2e-07
Identities = 55/64 (85%)
Strand = Plus / Plus
Query: 5 tgtactccctccagttcacaatttaagtcagtgtggcatttcccacattcatattgaagt 64
|||||| ||||| |||||||| ||||||| | | |||||||||||||||||||| | ||
Sbjct: 3 tgtacttcctccgtttcacaatgtaagtcattctagcatttcccacattcatattaatgt 62
Query: 65 taat 68
||||
Sbjct: 63 taat 66
>RF00906;MIR1122;AP002524.2/113149-113010 39947:Oryza sativa
Japonica Group
Length = 140
Score = 83.8 bits (42), Expect = 7e-16
Identities = 69/78 (88%)
Strand = Plus / Plus
Query: 83 atatgtatgtagattcattaacatcaatatgaatgtggagaatgctgaaatgacttacat 142
|||| ||| ||||||||||||||||||||||||||||| |||| | ||||||||||||
Sbjct: 59 atatctatctagattcattaacatcaatatgaatgtgggaaatgttagaatgacttacat 118
Query: 143 tgtgaaatggaggaagta 160
||||||| ||||| ||||
Sbjct: 119 tgtgaaacggagggagta 136
Score = 69.9 bits (35), Expect = 1e-11
Identities = 62/71 (87%)
Strand = Plus / Minus
Query: 7 tactccctccagttcacaatttaagtcagtgtggcatttcccacattcatattgaagtta 66
|||||||||| |||||||| ||||||| | | ||||||||||||||||||||| ||||
Sbjct: 136 tactccctccgtttcacaatgtaagtcattctaacatttcccacattcatattgatgtta 77
Query: 67 atgaatgtaga 77
|||||| ||||
Sbjct: 76 atgaatctaga 66
Score = 63.9 bits (32), Expect = 6e-10
Identities = 50/56 (89%)
Strand = Plus / Minus
Query: 105 atcaatatgaatgtggagaatgctgaaatgacttacattgtgaaatggaggaagta 160
|||||||||||| ||| |||||| ||||||||||||||||||| ||||||||||
Sbjct: 60 atcaatatgaatatgggaaatgctagaatgacttacattgtgaaacggaggaagta 5
Score = 48.1 bits (24), Expect = 4e-05
Identities = 48/56 (85%)
Strand = Plus / Plus
Query: 6 gtactccctccagttcacaatttaagtcagtgtggcatttcccacattcatattga 61
||||| ||||| |||||||| ||||||| | | |||||||||| |||||||||||
Sbjct: 4 gtacttcctccgtttcacaatgtaagtcattctagcatttcccatattcatattga 59
>RF00906;MIR1122;AP008215.1/3976175-3976317 39947:Oryza sativa
Japonica Group
Length = 143
Score = 81.8 bits (41), Expect = 3e-15
Identities = 62/69 (89%)
Strand = Plus / Plus
Query: 92 tagattcattaacatcaatatgaatgtggagaatgctgaaatgacttacattgtgaaatg 151
||||||||||||||||||||||||| ||| |||||| ||||||||||||||||||| |
Sbjct: 71 tagattcattaacatcaatatgaatatgggaaatgctagaatgacttacattgtgaaacg 130
Query: 152 gaggaagta 160
|||| ||||
Sbjct: 131 gagggagta 139
Score = 75.8 bits (38), Expect = 2e-13
Identities = 65/74 (87%)
Strand = Plus / Minus
Query: 6 gtactccctccagttcacaatttaagtcagtgtggcatttcccacattcatattgaagtt 65
||||||||||| |||||||| ||||||| | | |||||||||| ||||||||||| |||
Sbjct: 140 gtactccctccgtttcacaatgtaagtcattctagcatttcccatattcatattgatgtt 81
Query: 66 aatgaatgtagaca 79
||||||| ||||||
Sbjct: 80 aatgaatctagaca 67
>RF00906;MIR1122;AAAA02034059.1/74410-74542 39946:Oryza sativa
Indica Group
Length = 133
Score = 81.8 bits (41), Expect = 3e-15
Identities = 62/69 (89%)
Strand = Plus / Plus
Query: 92 tagattcattaacatcaatatgaatgtggagaatgctgaaatgacttacattgtgaaatg 151
||||| ||||||||||||||||||||||| |||||| ||||||||||||| ||||| |
Sbjct: 61 tagatccattaacatcaatatgaatgtgggaaatgctagaatgacttacattatgaaacg 120
Query: 152 gaggaagta 160
|||||||||
Sbjct: 121 gaggaagta 129
Score = 67.9 bits (34), Expect = 4e-11
Identities = 58/66 (87%)
Strand = Plus / Minus
Query: 19 ttcacaatttaagtcagtgtggcatttcccacattcatattgaagttaatgaatgtagac 78
|||| ||| ||||||| | | |||||||||||||||||||||| ||||||| || |||||
Sbjct: 117 ttcataatgtaagtcattctagcatttcccacattcatattgatgttaatggatctagac 58
Query: 79 atatat 84
||||||
Sbjct: 57 atatat 52
>RF00906;MIR1122;AC223445.1/72991-73152 4538:Oryza glaberrima
(African rice)
Length = 162
Score = 81.8 bits (41), Expect = 3e-15
Identities = 71/81 (87%)
Strand = Plus / Minus
Query: 40 gcatttcccacattcatattgaagttaatgaatgtagacatatatatgtatgtagattca 99
||||| ||||||||||||| || | |||||||| ||||||||||||||| | ||| ||||
Sbjct: 125 gcattgcccacattcatatagatgctaatgaatctagacatatatatgtgtataggttca 66
Query: 100 ttaacatcaatatgaatgtgg 120
|||||||| |||||| |||||
Sbjct: 65 ttaacatctatatgattgtgg 45
Score = 58.0 bits (29), Expect = 4e-08
Identities = 68/81 (83%)
Strand = Plus / Plus
Query: 40 gcatttcccacattcatattgaagttaatgaatgtagacatatatatgtatgtagattca 99
||||| |||||| |||||| || ||||||||| || ||| |||||| | | ||||||||
Sbjct: 38 gcattgcccacaatcatatagatgttaatgaacctatacacatatatatgtctagattca 97
Query: 100 ttaacatcaatatgaatgtgg 120
||| |||| ||||||||||||
Sbjct: 98 ttagcatctatatgaatgtgg 118
>RF00906;MIR1122;AL731615.4/29247-29098 39947:Oryza sativa Japonica
Group
Length = 150
Score = 81.8 bits (41), Expect = 3e-15
Identities = 62/69 (89%)
Strand = Plus / Minus
Query: 92 tagattcattaacatcaatatgaatgtggagaatgctgaaatgacttacattgtgaaatg 151
||||||||||||||||||||||||||||| |||| | |||||||||||||| ||||| |
Sbjct: 73 tagattcattaacatcaatatgaatgtgggaaatggtaaaatgacttacattatgaaacg 14
Query: 152 gaggaagta 160
|||| ||||
Sbjct: 13 gagggagta 5
Score = 65.9 bits (33), Expect = 2e-10
Identities = 60/69 (86%)
Strand = Plus / Plus
Query: 92 tagattcattaacatcaatatgaatgtggagaatgctgaaatgacttacattgtgaaatg 151
||||||||||||||||||||||||| | | |||||| ||||||||| |||||| || |
Sbjct: 78 tagattcattaacatcaatatgaatatagtaaatgctagaatgacttatattgtggaacg 137
Query: 152 gaggaagta 160
|||||||||
Sbjct: 138 gaggaagta 146
>RF00906;MIR1122;AAAA02022229.1/19711-19563 39946:Oryza sativa
Indica Group
Length = 149
Score = 81.8 bits (41), Expect = 3e-15
Identities = 53/57 (92%)
Strand = Plus / Minus
Query: 104 catcaatatgaatgtggagaatgctgaaatgacttacattgtgaaatggaggaagta 160
||||||||||||||||| |||||| |||||||||||||||||||| ||||||||||
Sbjct: 61 catcaatatgaatgtgggaaatgctaaaatgacttacattgtgaaacggaggaagta 5
Score = 58.0 bits (29), Expect = 4e-08
Identities = 59/69 (85%)
Strand = Plus / Plus
Query: 92 tagattcattaacatcaatatgaatgtggagaatgctgaaatgacttacattgtgaaatg 151
|||||| |||||||||||||| ||| || |||||| ||||||||||||||||||| |
Sbjct: 77 tagatttattaacatcaatataaatatgagaaatgctagaatgacttacattgtgaaacg 136
Query: 152 gaggaagta 160
|||| ||||
Sbjct: 137 gagggagta 145
Score = 56.0 bits (28), Expect = 2e-07
Identities = 49/56 (87%)
Strand = Plus / Plus
Query: 6 gtactccctccagttcacaatttaagtcagtgtggcatttcccacattcatattga 61
||||| ||||| |||||||| ||||||| | | ||||||||||||||||||||||
Sbjct: 4 gtacttcctccgtttcacaatgtaagtcattttagcatttcccacattcatattga 59
>RF00906;MIR1122;AAAA02021768.1/34563-34436 39946:Oryza sativa
Indica Group
Length = 128
Score = 81.8 bits (41), Expect = 3e-15
Identities = 62/69 (89%)
Strand = Plus / Minus
Query: 92 tagattcattaacatcaatatgaatgtggagaatgctgaaatgacttacattgtgaaatg 151
|||||||||||||||| |||||||||||| |||||| ||||||||||||||||||| |
Sbjct: 73 tagattcattaacatctatatgaatgtgggaaatgctagaatgacttacattgtgaaacg 14
Query: 152 gaggaagta 160
|||| ||||
Sbjct: 13 gagggagta 5
Score = 67.9 bits (34), Expect = 4e-11
Identities = 58/66 (87%)
Strand = Plus / Plus
Query: 7 tactccctccagttcacaatttaagtcagtgtggcatttcccacattcatattgaagtta 66
|||||||||| |||||||| ||||||| | | ||||||||||||||||||| || ||||
Sbjct: 5 tactccctccgtttcacaatgtaagtcattctagcatttcccacattcatatagatgtta 64
Query: 67 atgaat 72
||||||
Sbjct: 65 atgaat 70
Score = 56.0 bits (28), Expect = 2e-07
Identities = 46/52 (88%)
Strand = Plus / Minus
Query: 7 tactccctccagttcacaatttaagtcagtgtggcatttcccacattcatat 58
|||||||||| |||||||| ||||||| | | |||||||||||||||||||
Sbjct: 124 tactccctccgtttcacaatgtaagtcattctagcatttcccacattcatat 73
Score = 56.0 bits (28), Expect = 2e-07
Identities = 46/52 (88%)
Strand = Plus / Plus
Query: 109 atatgaatgtggagaatgctgaaatgacttacattgtgaaatggaggaagta 160
|||||||||||| |||||| ||||||||||||||||||| ||||| ||||
Sbjct: 73 atatgaatgtgggaaatgctagaatgacttacattgtgaaacggagggagta 124
>RF00906;MIR1122;DQ855268.1/1381-1542 39947:Oryza sativa Japonica
Group
Length = 162
Score = 81.8 bits (41), Expect = 3e-15
Identities = 101/121 (83%)
Strand = Plus / Plus
Query: 40 gcatttcccacattcatattgaagttaatgaatgtagacatatatatgtatgtagattca 99
||||| ||||||||||| | | |||||||||| ||||||| | ||| ||| ||||||||
Sbjct: 38 gcattacccacattcatttagttgttaatgaatctagacatgtgtatatatttagattca 97
Query: 100 ttaacatcaatatgaatgtggagaatgctgaaatgacttacattgtgaaatggaggaagt 159
|||||||| ||||| || |||| |||||| || | |||||||||||||| ||||| |||
Sbjct: 98 ttaacatctatatgtatatggacaatgctagaaagtcttacattgtgaaacggagggagt 157
Query: 160 a 160
|
Sbjct: 158 a 158
Score = 58.0 bits (29), Expect = 4e-08
Identities = 59/69 (85%)
Strand = Plus / Minus
Query: 92 tagattcattaacatcaatatgaatgtggagaatgctgaaatgacttacattgtgaaatg 151
|||||||||||||| | | |||||||||| |||||| || | |||||||||||||| |
Sbjct: 73 tagattcattaacaactaaatgaatgtgggtaatgctagaaagtcttacattgtgaaacg 14
Query: 152 gaggaagta 160
|||||||||
Sbjct: 13 gaggaagta 5
>RF00906;MIR1122;AP005731.3/38189-38042 39947:Oryza sativa Japonica
Group
Length = 148
Score = 81.8 bits (41), Expect = 3e-15
Identities = 62/69 (89%)
Strand = Plus / Plus
Query: 92 tagattcattaacatcaatatgaatgtggagaatgctgaaatgacttacattgtgaaatg 151
|||||| || ||||||||||||||||||| |||||| ||||||||||||||||||| |
Sbjct: 76 tagatttatgaacatcaatatgaatgtgggaaatgctagaatgacttacattgtgaaacg 135
Query: 152 gaggaagta 160
|||||||||
Sbjct: 136 gaggaagta 144
Score = 67.9 bits (34), Expect = 4e-11
Identities = 58/66 (87%)
Strand = Plus / Minus
Query: 95 attcattaacatcaatatgaatgtggagaatgctgaaatgacttacattgtgaaatggag 154
|||||| ||||||||||||||||||| |||||| |||| |||||||||||||| ||||
Sbjct: 70 attcatgaacatcaatatgaatgtgggaaatgctagaatggcttacattgtgaaacggag 11
Query: 155 gaagta 160
| ||||
Sbjct: 10 ggagta 5
Score = 58.0 bits (29), Expect = 4e-08
Identities = 53/61 (86%)
Strand = Plus / Minus
Query: 19 ttcacaatttaagtcagtgtggcatttcccacattcatattgaagttaatgaatgtagac 78
|||||||| ||||||| | | |||||||||||||||||||||| ||| || ||| |||||
Sbjct: 132 ttcacaatgtaagtcattctagcatttcccacattcatattgatgttcataaatctagac 73
Query: 79 a 79
|
Sbjct: 72 a 72
>RF00906;MIR1122;AP008210.1/12565127-12564978 39947:Oryza sativa
Japonica Group
Length = 150
Score = 81.8 bits (41), Expect = 3e-15
Identities = 62/69 (89%)
Strand = Plus / Plus
Query: 92 tagattcattaacatcaatatgaatgtggagaatgctgaaatgacttacattgtgaaatg 151
||||||||||||||||||||||||||||| |||| | |||||||||||||| ||||| |
Sbjct: 78 tagattcattaacatcaatatgaatgtgggaaatggtaaaatgacttacattatgaaacg 137
Query: 152 gaggaagta 160
|||| ||||
Sbjct: 138 gagggagta 146
Score = 65.9 bits (33), Expect = 2e-10
Identities = 60/69 (86%)
Strand = Plus / Minus
Query: 92 tagattcattaacatcaatatgaatgtggagaatgctgaaatgacttacattgtgaaatg 151
||||||||||||||||||||||||| | | |||||| ||||||||| |||||| || |
Sbjct: 73 tagattcattaacatcaatatgaatatagtaaatgctagaatgacttatattgtggaacg 14
Query: 152 gaggaagta 160
|||||||||
Sbjct: 13 gaggaagta 5
>RF00906;MIR1122;AP005590.3/107829-107687 39947:Oryza sativa
Japonica Group
Length = 143
Score = 81.8 bits (41), Expect = 3e-15
Identities = 62/69 (89%)
Strand = Plus / Minus
Query: 92 tagattcattaacatcaatatgaatgtggagaatgctgaaatgacttacattgtgaaatg 151
||||||||||||||||||||||||| ||| |||||| ||||||||||||||||||| |
Sbjct: 73 tagattcattaacatcaatatgaatatgggaaatgctagaatgacttacattgtgaaacg 14
Query: 152 gaggaagta 160
|||| ||||
Sbjct: 13 gagggagta 5
Score = 75.8 bits (38), Expect = 2e-13
Identities = 65/74 (87%)
Strand = Plus / Plus
Query: 6 gtactccctccagttcacaatttaagtcagtgtggcatttcccacattcatattgaagtt 65
||||||||||| |||||||| ||||||| | | |||||||||| ||||||||||| |||
Sbjct: 4 gtactccctccgtttcacaatgtaagtcattctagcatttcccatattcatattgatgtt 63
Query: 66 aatgaatgtagaca 79
||||||| ||||||
Sbjct: 64 aatgaatctagaca 77
>RF00906;MIR1122;AL928743.1/4136-4001 4530:Oryza sativa (rice)
Length = 136
Score = 81.8 bits (41), Expect = 3e-15
Identities = 62/69 (89%)
Strand = Plus / Plus
Query: 92 tagattcattaacatcaatatgaatgtggagaatgctgaaatgacttacattgtgaaatg 151
||||||||||||||||||||||||||||| ||||| ||||||||| ||||||||| |
Sbjct: 64 tagattcattaacatcaatatgaatgtgggatatgctagaatgacttatattgtgaaacg 123
Query: 152 gaggaagta 160
|||||||||
Sbjct: 124 gaggaagta 132
Score = 77.8 bits (39), Expect = 4e-14
Identities = 54/59 (91%)
Strand = Plus / Minus
Query: 102 aacatcaatatgaatgtggagaatgctgaaatgacttacattgtgaaatggaggaagta 160
|||||||||||||||||||| |||||| ||||||||||||||||||| ||||| ||||
Sbjct: 63 aacatcaatatgaatgtggaaaatgctagaatgacttacattgtgaaacggagggagta 5
Score = 60.0 bits (30), Expect = 1e-08
Identities = 48/54 (88%)
Strand = Plus / Minus
Query: 19 ttcacaatttaagtcagtgtggcatttcccacattcatattgaagttaatgaat 72
|||||||| ||||||| | | |||| ||||||||||||||||| ||||||||||
Sbjct: 120 ttcacaatataagtcattctagcatatcccacattcatattgatgttaatgaat 67
Score = 54.0 bits (27), Expect = 6e-07
Identities = 48/55 (87%)
Strand = Plus / Plus
Query: 7 tactccctccagttcacaatttaagtcagtgtggcatttcccacattcatattga 61
|||||||||| |||||||| ||||||| | | |||||| |||||||||||||||
Sbjct: 5 tactccctccgtttcacaatgtaagtcattctagcattttccacattcatattga 59
>RF00906;MIR1122;AACV01021759.1/1958-2106 39947:Oryza sativa
Japonica Group
Length = 149
Score = 81.8 bits (41), Expect = 3e-15
Identities = 80/93 (86%)
Strand = Plus / Plus
Query: 5 tgtactccctccagttcacaatttaagtcagtgtggcatttcccacattcatattgaagt 64
|||||||||||| |||| ||| ||||||| | | ||||||| || ||||||||||| ||
Sbjct: 3 tgtactccctccgtttcataatgtaagtcattctagcatttctcatattcatattgatgt 62
Query: 65 taatgaatgtagacatatatatgtatgtagatt 97
|||||||| ||||||||||||| ||| ||||||
Sbjct: 63 taatgaatctagacatatatatctatctagatt 95
Score = 65.9 bits (33), Expect = 2e-10
Identities = 60/69 (86%)
Strand = Plus / Minus
Query: 92 tagattcattaacatcaatatgaatgtggagaatgctgaaatgacttacattgtgaaatg 151
||||||||||||||||||||||||| || |||||| ||||||||||||| ||||| |
Sbjct: 73 tagattcattaacatcaatatgaatatgagaaatgctagaatgacttacattatgaaacg 14
Query: 152 gaggaagta 160
|||| ||||
Sbjct: 13 gagggagta 5
>RF00906;MIR1122;AC146937.2/33799-33900 39947:Oryza sativa Japonica
Group
Length = 102
Score = 81.8 bits (41), Expect = 3e-15
Identities = 71/81 (87%)
Strand = Plus / Plus
Query: 40 gcatttcccacattcatattgaagttaatgaatgtagacatatatatgtatgtagattca 99
|||||| |||||||||||| | |||||||||| ||||||| ||||| ||| ||||||||
Sbjct: 8 gcattttccacattcatataggtgttaatgaatctagacatctatatatatctagattca 67
Query: 100 ttaacatcaatatgaatgtgg 120
|||||| | ||||||||||||
Sbjct: 68 ttaacacctatatgaatgtgg 88
Score = 79.8 bits (40), Expect = 1e-14
Identities = 76/88 (86%)
Strand = Plus / Minus
Query: 41 catttcccacattcatattgaagttaatgaatgtagacatatatatgtatgtagattcat 100
|||||||||||||||||| | |||||||||| |||| ||||||| | | |||||||||
Sbjct: 94 catttcccacattcatataggtgttaatgaatctagatatatatagatgtctagattcat 35
Query: 101 taacatcaatatgaatgtggagaatgct 128
||||| | ||||||||||||| ||||||
Sbjct: 34 taacacctatatgaatgtggaaaatgct 7
>RF00906;MIR1122;AAAA02012042.1/23113-23216 39946:Oryza sativa
Indica Group
Length = 104
Score = 81.8 bits (41), Expect = 3e-15
Identities = 59/65 (90%)
Strand = Plus / Minus
Query: 96 ttcattaacatcaatatgaatgtggagaatgctgaaatgacttacattgtgaaatggagg 155
||||||||||||||||||||||||| |||||| |||||||| |||||||||| |||||
Sbjct: 69 ttcattaacatcaatatgaatgtgggaaatgctagaatgacttgcattgtgaaacggagg 10
Query: 156 aagta 160
|||||
Sbjct: 9 aagta 5
Score = 58.0 bits (29), Expect = 4e-08
Identities = 47/53 (88%)
Strand = Plus / Plus
Query: 19 ttcacaatttaagtcagtgtggcatttcccacattcatattgaagttaatgaa 71
|||||||| |||||| | | |||||||||||||||||||||| |||||||||
Sbjct: 17 ttcacaatgcaagtcattctagcatttcccacattcatattgatgttaatgaa 69
>RF00906;MIR1122;AP008216.1/19603826-19603676 39947:Oryza sativa
Japonica Group
Length = 151
Score = 81.8 bits (41), Expect = 3e-15
Identities = 62/69 (89%)
Strand = Plus / Plus
Query: 92 tagattcattaacatcaatatgaatgtggagaatgctgaaatgacttacattgtgaaatg 151
|||||||||||||||||||||||||||| ||| || |||||||||||||||||||| |
Sbjct: 79 tagattcattaacatcaatatgaatgtgagaaatactaaaatgacttacattgtgaaacg 138
Query: 152 gaggaagta 160
|||| ||||
Sbjct: 139 gagggagta 147
Score = 67.9 bits (34), Expect = 4e-11
Identities = 64/74 (86%)
Strand = Plus / Minus
Query: 6 gtactccctccagttcacaatttaagtcagtgtggcatttcccacattcatattgaagtt 65
||||||||||| |||||||| ||||||| | | | ||||| |||||||||||||| |||
Sbjct: 148 gtactccctccgtttcacaatgtaagtcattttagtatttctcacattcatattgatgtt 89
Query: 66 aatgaatgtagaca 79
||||||| ||||||
Sbjct: 88 aatgaatctagaca 75
Score = 54.0 bits (27), Expect = 6e-07
Identities = 45/51 (88%)
Strand = Plus / Minus
Query: 99 attaacatcaatatgaatgtggagaatgctgaaatgacttacattgtgaaa 149
|||||||||||||| |||||| ||| || ||||||||||||||||||||
Sbjct: 66 attaacatcaatataaatgtgacaaatactaaaatgacttacattgtgaaa 16
>RF00906;MIR1122;AAAA02015106.1/4906-5019 39946:Oryza sativa Indica
Group
Length = 114
Score = 81.8 bits (41), Expect = 3e-15
Identities = 71/81 (87%)
Strand = Plus / Plus
Query: 40 gcatttcccacattcatattgaagttaatgaatgtagacatatatatgtatgtagattca 99
||||| ||||||||||||| | |||||||||| |||| |||||||||| ||||||||
Sbjct: 14 gcattgcccacattcatatatatgttaatgaatctagatatatatatgtgcctagattca 73
Query: 100 ttaacatcaatatgaatgtgg 120
|||||||| ||||||||||||
Sbjct: 74 ttaacatctatatgaatgtgg 94
Score = 81.8 bits (41), Expect = 3e-15
Identities = 71/81 (87%)
Strand = Plus / Minus
Query: 40 gcatttcccacattcatattgaagttaatgaatgtagacatatatatgtatgtagattca 99
||||| ||||||||||||| || |||||||||| ||| || |||||| ||| ||||||||
Sbjct: 101 gcattgcccacattcatatagatgttaatgaatctaggcacatatatatatctagattca 42
Query: 100 ttaacatcaatatgaatgtgg 120
||||||| ||||||||||||
Sbjct: 41 ttaacatatatatgaatgtgg 21
>RF00906;MIR1122;AP005688.3/36085-35944 39947:Oryza sativa Japonica
Group
Length = 142
Score = 81.8 bits (41), Expect = 3e-15
Identities = 62/69 (89%)
Strand = Plus / Minus
Query: 92 tagattcattaacatcaatatgaatgtggagaatgctgaaatgacttacattgtgaaatg 151
||||||||||||||||||||||||| | || |||||| ||||||||||||||||||| |
Sbjct: 73 tagattcattaacatcaatatgaatatagaaaatgctagaatgacttacattgtgaaacg 14
Query: 152 gaggaagta 160
|||| ||||
Sbjct: 13 gagggagta 5
Score = 56.0 bits (28), Expect = 2e-07
Identities = 61/72 (84%)
Strand = Plus / Plus
Query: 6 gtactccctccagttcacaatttaagtcagtgtggcatttcccacattcatattgaagtt 65
||||||||||| |||||||| ||||||| | | |||||| | | ||||||||||| |||
Sbjct: 4 gtactccctccgtttcacaatgtaagtcattctagcattttctatattcatattgatgtt 63
Query: 66 aatgaatgtaga 77
||||||| ||||
Sbjct: 64 aatgaatctaga 75
Score = 54.0 bits (27), Expect = 6e-07
Identities = 54/63 (85%)
Strand = Plus / Plus
Query: 99 attaacatcaatatgaatgtggagaatgctgaaatgacttacattgtgaaatggaggaag 158
|||||||||||||||||||| | ||| | ||||||||| ||||||||| ||||||||
Sbjct: 77 attaacatcaatatgaatgtaggaaatagtagaatgacttatattgtgaaacggaggaag 136
Query: 159 tat 161
|||
Sbjct: 137 tat 139
>RF00906;MIR1122;AAAA02027662.1/3302-3160 39946:Oryza sativa Indica
Group
Length = 143
Score = 81.8 bits (41), Expect = 3e-15
Identities = 62/69 (89%)
Strand = Plus / Plus
Query: 92 tagattcattaacatcaatatgaatgtggagaatgctgaaatgacttacattgtgaaatg 151
|||||||||||||||||||||||||||||| |||| | ||||||||| ||| ||||| |
Sbjct: 71 tagattcattaacatcaatatgaatgtggaaaatgttagaatgacttatattatgaaacg 130
Query: 152 gaggaagta 160
|||||||||
Sbjct: 131 gaggaagta 139
Score = 61.9 bits (31), Expect = 3e-09
Identities = 40/43 (93%)
Strand = Plus / Minus
Query: 41 catttcccacattcatattgaagttaatgaatgtagacatata 83
||||| ||||||||||||||| |||||||||| ||||||||||
Sbjct: 105 cattttccacattcatattgatgttaatgaatctagacatata 63
Score = 48.1 bits (24), Expect = 4e-05
Identities = 51/60 (85%)
Strand = Plus / Minus
Query: 101 taacatcaatatgaatgtggagaatgctgaaatgacttacattgtgaaatggaggaagta 160
||||||||| || |||||| | |||||| ||||||||||||| ||||| ||||| ||||
Sbjct: 64 taacatcaacataaatgtgaaaaatgctagaatgacttacattatgaaacggagggagta 5
>RF00906;MIR1122;AACV01020396.1/23473-23343 39947:Oryza sativa
Japonica Group
Length = 131
Score = 81.8 bits (41), Expect = 3e-15
Identities = 62/69 (89%)
Strand = Plus / Plus
Query: 92 tagattcattaacatcaatatgaatgtggagaatgctgaaatgacttacattgtgaaatg 151
|||||||||||||||||||||||||||| |||||| ||||||||| ||||||||| |
Sbjct: 59 tagattcattaacatcaatatgaatgtgagaaatgctagaatgacttatattgtgaaacg 118
Query: 152 gaggaagta 160
|||||||||
Sbjct: 119 gaggaagta 127
Score = 63.9 bits (32), Expect = 6e-10
Identities = 62/72 (86%)
Strand = Plus / Minus
Query: 6 gtactccctccagttcacaatttaagtcagtgtggcatttcccacattcatattgaagtt 65
||||| ||||| |||||||| ||||||| | | ||||||| |||||||||||||| |||
Sbjct: 128 gtacttcctccgtttcacaatataagtcattctagcatttctcacattcatattgatgtt 69
Query: 66 aatgaatgtaga 77
||||||| ||||
Sbjct: 68 aatgaatctaga 57
Score = 52.0 bits (26), Expect = 2e-06
Identities = 29/30 (96%)
Strand = Plus / Minus
Query: 131 aatgacttacattgtgaaatggaggaagta 160
||||||||||||||||||| ||||||||||
Sbjct: 34 aatgacttacattgtgaaacggaggaagta 5
>RF00906;MIR1122;AAAA02032856.1/3493-3654 39946:Oryza sativa Indica
Group
Length = 162
Score = 79.8 bits (40), Expect = 1e-14
Identities = 94/112 (83%)
Strand = Plus / Plus
Query: 49 acattcatattgaagttaatgaatgtagacatatatatgtatgtagattcattaacatca 108
|||||||| | || |||||||||| ||||||||| || || | ||||||||||||||||
Sbjct: 47 acattcatttagatgttaatgaatatagacatatgtacgtgtttagattcattaacatct 106
Query: 109 atatgaatgtggagaatgctgaaatgacttacattgtgaaatggaggaagta 160
||||| ||||| |||||| || | |||||||||||||| ||||||||||
Sbjct: 107 atatgtatgtgagcaatgctagaaagtcttacattgtgaaacggaggaagta 158
>RF00906;MIR1122;AACV01016474.1/3638-3773 39947:Oryza sativa
Japonica Group
Length = 136
Score = 79.8 bits (40), Expect = 1e-14
Identities = 61/68 (89%)
Strand = Plus / Plus
Query: 92 tagattcattaacatcaatatgaatgtggagaatgctgaaatgacttacattgtgaaatg 151
||||||||||| ||||||||||||| ||| |||||| |||||||||| ||||||||| |
Sbjct: 64 tagattcattatcatcaatatgaatacggaaaatgctaaaatgacttatattgtgaaacg 123
Query: 152 gaggaagt 159
||||||||
Sbjct: 124 gaggaagt 131
Score = 58.0 bits (29), Expect = 4e-08
Identities = 59/69 (85%)
Strand = Plus / Minus
Query: 19 ttcacaatttaagtcagtgtggcatttcccacattcatattgaagttaatgaatgtagac 78
|||||||| ||||||| | | |||||| || ||||||||||| | |||||||| |||||
Sbjct: 120 ttcacaatataagtcattttagcattttccgtattcatattgatgataatgaatctagac 61
Query: 79 atatatatg 87
|||||||||
Sbjct: 60 atatatatg 52
>RF00906;MIR1122;CR855156.1/56940-57078 4530:Oryza sativa (rice)
Length = 139
Score = 79.8 bits (40), Expect = 1e-14
Identities = 55/60 (91%)
Strand = Plus / Minus
Query: 101 taacatcaatatgaatgtggagaatgctgaaatgacttacattgtgaaatggaggaagta 160
||||||||||||||||||||| |||||| ||||||||| ||||||||| ||||||||||
Sbjct: 64 taacatcaatatgaatgtggaaaatgctagaatgacttatattgtgaaacggaggaagta 5
Score = 75.8 bits (38), Expect = 2e-13
Identities = 62/70 (88%)
Strand = Plus / Plus
Query: 92 tagattcattaacatcaatatgaatgtggagaatgctgaaatgacttacattgtgaaatg 151
||||||||||||||||||||||||||||| |||| | ||||||||| ||||||||| |
Sbjct: 67 tagattcattaacatcaatatgaatgtgggaaatgttagaatgacttatattgtgaaacg 126
Query: 152 gaggaagtat 161
|||| |||||
Sbjct: 127 gagggagtat 136
Score = 69.9 bits (35), Expect = 1e-11
Identities = 62/71 (87%)
Strand = Plus / Minus
Query: 7 tactccctccagttcacaatttaagtcagtgtggcatttcccacattcatattgaagtta 66
|||||||||| |||||||| ||||||| | | ||||||||||||||||||||| ||||
Sbjct: 135 tactccctccgtttcacaatataagtcattctaacatttcccacattcatattgatgtta 76
Query: 67 atgaatgtaga 77
|||||| ||||
Sbjct: 75 atgaatctaga 65
Score = 48.1 bits (24), Expect = 4e-05
Identities = 42/48 (87%)
Strand = Plus / Plus
Query: 19 ttcacaatttaagtcagtgtggcatttcccacattcatattgaagtta 66
|||||||| ||||||| | | |||||| ||||||||||||||| ||||
Sbjct: 17 ttcacaatataagtcattctagcattttccacattcatattgatgtta 64
>RF00906;MIR1122;AAAA02024426.1/6236-6378 39946:Oryza sativa Indica
Group
Length = 143
Score = 77.8 bits (39), Expect = 4e-14
Identities = 54/59 (91%)
Strand = Plus / Plus
Query: 104 catcaatatgaatgtggagaatgctgaaatgacttacattgtgaaatggaggaagtatg 162
|||||||||||||||||| |||||| |||||||||| ||||||||| ||||| ||||||
Sbjct: 83 catcaatatgaatgtggaaaatgctaaaatgacttatattgtgaaacggagggagtatg 141
Score = 75.8 bits (38), Expect = 2e-13
Identities = 62/70 (88%)
Strand = Plus / Minus
Query: 92 tagattcattaacatcaatatgaatgtggagaatgctgaaatgacttacattgtgaaatg 151
||||||||||| ||||||||| ||| || |||||| |||||||||||||||||||| |
Sbjct: 73 tagattcattagcatcaatataaatatgagaaatgctaaaatgacttacattgtgaaacg 14
Query: 152 gaggaagtat 161
||||||||||
Sbjct: 13 gaggaagtat 4
Score = 54.0 bits (27), Expect = 6e-07
Identities = 48/55 (87%)
Strand = Plus / Minus
Query: 7 tactccctccagttcacaatttaagtcagtgtggcatttcccacattcatattga 61
|||||||||| |||||||| ||||||| | | |||||| |||||||||||||||
Sbjct: 139 tactccctccgtttcacaatataagtcattttagcattttccacattcatattga 85
>RF00906;MIR1122;AAAA02008053.1/17150-17309 39946:Oryza sativa
Indica Group
Length = 160
Score = 77.8 bits (39), Expect = 4e-14
Identities = 84/98 (85%), Gaps = 2/98 (2%)
Strand = Plus / Minus
Query: 63 gttaatgaatgtagacatatatatgtatgtagattcattaacatcaatatgaatgtggag 122
|||||||||| ||||||||| | ||| | ||||||||||||||| ||||||||||||
Sbjct: 100 gttaatgaatctagacatatgtgtgtct--agattcattaacatctatatgaatgtgggc 43
Query: 123 aatgctgaaatgacttacattgtgaaatggaggaagta 160
|||||| || |||||||||| ||||| ||||||||||
Sbjct: 42 aatgctagaaagacttacattatgaaacggaggaagta 5
Score = 60.0 bits (30), Expect = 1e-08
Identities = 66/77 (85%), Gaps = 2/77 (2%)
Strand = Plus / Plus
Query: 40 gcatttcccacattcatattgaagttaatgaatgtagacatatatatgtatgtagattca 99
||||| ||||||||||||| || |||||||||| |||||| | ||||| | ||||||||
Sbjct: 38 gcattgcccacattcatatagatgttaatgaatctagacacacatatg--tctagattca 95
Query: 100 ttaacatcaatatgaat 116
|||||||| | ||||||
Sbjct: 96 ttaacatctagatgaat 112
>RF00906;MIR1122;AY947024.1/140-5 4530:Oryza sativa (rice)
Length = 136
Score = 77.8 bits (39), Expect = 4e-14
Identities = 54/59 (91%)
Strand = Plus / Minus
Query: 105 atcaatatgaatgtggagaatgctgaaatgacttacattgtgaaatggaggaagtatgt 163
|||||||||||||||| |||||| ||||||||||||||||||| |||||||||||||
Sbjct: 60 atcaatatgaatgtgggaaatgctagaatgacttacattgtgaaacggaggaagtatgt 2
Score = 65.9 bits (33), Expect = 2e-10
Identities = 60/69 (86%)
Strand = Plus / Plus
Query: 92 tagattcattaacatcaatatgaatgtggagaatgctgaaatgacttacattgtgaaatg 151
||||||||||| ||| ||||||||||||| |||||| ||||||||| ||||||||| |
Sbjct: 64 tagattcattagcattaatatgaatgtgggaaatgctagaatgacttatattgtgaaacg 123
Query: 152 gaggaagta 160
|||| ||||
Sbjct: 124 gagggagta 132
Score = 63.9 bits (32), Expect = 6e-10
Identities = 62/72 (86%)
Strand = Plus / Minus
Query: 6 gtactccctccagttcacaatttaagtcagtgtggcatttcccacattcatattgaagtt 65
||||||||||| |||||||| ||||||| | | |||||||||||||||||||| | | |
Sbjct: 133 gtactccctccgtttcacaatataagtcattctagcatttcccacattcatattaatgct 74
Query: 66 aatgaatgtaga 77
||||||| ||||
Sbjct: 73 aatgaatctaga 62
Score = 54.0 bits (27), Expect = 6e-07
Identities = 39/43 (90%)
Strand = Plus / Plus
Query: 19 ttcacaatttaagtcagtgtggcatttcccacattcatattga 61
|||||||| ||||||| | | ||||||||||||||||||||||
Sbjct: 17 ttcacaatgtaagtcattctagcatttcccacattcatattga 59
>RF00906;MIR1122;FJ581044.1/8310-8181 4538:Oryza glaberrima (African
rice)
Length = 130
Score = 77.8 bits (39), Expect = 4e-14
Identities = 69/79 (87%)
Strand = Plus / Minus
Query: 82 tatatgtatgtagattcattaacatcaatatgaatgtggagaatgctgaaatgacttaca 141
||||| ||| ||||||||||||||||||||| | |||||| |||||| ||| |||||||
Sbjct: 83 tatatctatatagattcattaacatcaatataattgtggaaaatgctagaataacttaca 24
Query: 142 ttgtgaaatggaggaagta 160
|||||||| ||||| ||||
Sbjct: 23 ttgtgaaacggagggagta 5
Score = 46.1 bits (23), Expect = 2e-04
Identities = 56/67 (83%)
Strand = Plus / Plus
Query: 6 gtactccctccagttcacaatttaagtcagtgtggcatttcccacattcatattgaagtt 65
||||||||||| |||||||| ||||| | | | |||||| ||||| | ||||||| |||
Sbjct: 4 gtactccctccgtttcacaatgtaagttattctagcattttccacaattatattgatgtt 63
Query: 66 aatgaat 72
|||||||
Sbjct: 64 aatgaat 70
>RF00906;MIR1122;AAAA02014011.1/23143-23002 39946:Oryza sativa
Indica Group
Length = 142
Score = 77.8 bits (39), Expect = 4e-14
Identities = 60/67 (89%)
Strand = Plus / Minus
Query: 94 gattcattaacatcaatatgaatgtggagaatgctgaaatgacttacattgtgaaatgga 153
||||||||| ||||||||||||||||| |||||| ||||||||||||||||||| |||
Sbjct: 71 gattcattagcatcaatatgaatgtgggaaatgctagaatgacttacattgtgaaacgga 12
Query: 154 ggaagta 160
|| ||||
Sbjct: 11 gggagta 5
Score = 69.9 bits (35), Expect = 1e-11
Identities = 59/67 (88%)
Strand = Plus / Plus
Query: 94 gattcattaacatcaatatgaatgtggagaatgctgaaatgacttacattgtgaaatgga 153
||||||||| ||||||||||||||||| |||||| ||||||||||||| ||||| |||
Sbjct: 72 gattcattagcatcaatatgaatgtgggaaatgctagaatgacttacattatgaaacgga 131
Query: 154 ggaagta 160
|| ||||
Sbjct: 132 gggagta 138
Score = 67.9 bits (34), Expect = 4e-11
Identities = 58/66 (87%)
Strand = Plus / Plus
Query: 7 tactccctccagttcacaatttaagtcagtgtggcatttcccacattcatattgaagtta 66
|||||||||| |||||||| ||||||| | | |||||||||||||||||||||| | ||
Sbjct: 5 tactccctccgtttcacaatgtaagtcattctagcatttcccacattcatattgatgcta 64
Query: 67 atgaat 72
||||||
Sbjct: 65 atgaat 70
Score = 60.0 bits (30), Expect = 1e-08
Identities = 57/66 (86%)
Strand = Plus / Minus
Query: 7 tactccctccagttcacaatttaagtcagtgtggcatttcccacattcatattgaagtta 66
|||||||||| |||| ||| ||||||| | | |||||||||||||||||||||| | ||
Sbjct: 138 tactccctccgtttcataatgtaagtcattctagcatttcccacattcatattgatgcta 79
Query: 67 atgaat 72
||||||
Sbjct: 78 atgaat 73
>RF00906;MIR1122;AL606446.1/41078-41221 39947:Oryza sativa Japonica
Group
Length = 144
Score = 77.8 bits (39), Expect = 4e-14
Identities = 57/63 (90%)
Strand = Plus / Minus
Query: 92 tagattcattaacatcaatatgaatgtggagaatgctgaaatgacttacattgtgaaatg 151
||||||||||||||||||||||||||||| |||| | ||||||||||||||||||| |
Sbjct: 73 tagattcattaacatcaatatgaatgtgggaaatgttagaatgacttacattgtgaaacg 14
Query: 152 gag 154
|||
Sbjct: 13 gag 11
Score = 65.9 bits (33), Expect = 2e-10
Identities = 109/136 (80%), Gaps = 15/136 (11%)
Strand = Plus / Plus
Query: 19 ttcacaatttaagtcagtgtggcatttcccacattcatattgaagttaatgaatgtagac 78
|||||||| ||||||| | | ||||||||||||||||||||| |||||||||| || ||
Sbjct: 17 ttcacaatgtaagtcattctaacatttcccacattcatattgatgttaatgaatctaaac 76
Query: 79 atatatatgtatgtagattcattaacatcaatatgaatgtggagaatgctgaaatgactt 138
| ||| |||||||||||||||||||||||| |||||| ||||||||
Sbjct: 77 a--------tatctagattcattaacatcaatatgaa-------aatgctagaatgactt 121
Query: 139 acattgtgaaatggag 154
||||||||||| ||||
Sbjct: 122 acattgtgaaacggag 137
>RF00906;MIR1122;AACV01021328.1/31319-31454 39947:Oryza sativa
Japonica Group
Length = 136
Score = 77.8 bits (39), Expect = 4e-14
Identities = 54/59 (91%)
Strand = Plus / Plus
Query: 105 atcaatatgaatgtggagaatgctgaaatgacttacattgtgaaatggaggaagtatgt 163
|||||||||||||||| |||||| ||||||||||||||||||| |||||||||||||
Sbjct: 77 atcaatatgaatgtgggaaatgctagaatgacttacattgtgaaacggaggaagtatgt 135
Score = 65.9 bits (33), Expect = 2e-10
Identities = 60/69 (86%)
Strand = Plus / Minus
Query: 92 tagattcattaacatcaatatgaatgtggagaatgctgaaatgacttacattgtgaaatg 151
||||||||||| ||| ||||||||||||| |||||| ||||||||| ||||||||| |
Sbjct: 73 tagattcattagcattaatatgaatgtgggaaatgctagaatgacttatattgtgaaacg 14
Query: 152 gaggaagta 160
|||| ||||
Sbjct: 13 gagggagta 5
Score = 63.9 bits (32), Expect = 6e-10
Identities = 62/72 (86%)
Strand = Plus / Plus
Query: 6 gtactccctccagttcacaatttaagtcagtgtggcatttcccacattcatattgaagtt 65
||||||||||| |||||||| ||||||| | | |||||||||||||||||||| | | |
Sbjct: 4 gtactccctccgtttcacaatataagtcattctagcatttcccacattcatattaatgct 63
Query: 66 aatgaatgtaga 77
||||||| ||||
Sbjct: 64 aatgaatctaga 75
Score = 54.0 bits (27), Expect = 6e-07
Identities = 39/43 (90%)
Strand = Plus / Minus
Query: 19 ttcacaatttaagtcagtgtggcatttcccacattcatattga 61
|||||||| ||||||| | | ||||||||||||||||||||||
Sbjct: 120 ttcacaatgtaagtcattctagcatttcccacattcatattga 78
>RF00906;MIR1122;AACV01017229.1/6664-6798 39947:Oryza sativa
Japonica Group
Length = 135
Score = 77.8 bits (39), Expect = 4e-14
Identities = 54/59 (91%)
Strand = Plus / Plus
Query: 102 aacatcaatatgaatgtggagaatgctgaaatgacttacattgtgaaatggaggaagta 160
||||||||||||||| |||| |||||| ||||||||||||||||||| ||||||||||
Sbjct: 73 aacatcaatatgaatatggaaaatgctagaatgacttacattgtgaaacggaggaagta 131
Score = 75.8 bits (38), Expect = 2e-13
Identities = 63/70 (90%), Gaps = 1/70 (1%)
Strand = Plus / Minus
Query: 92 tagattcattaacatcaatatgaatgtggagaatgctgaaatgacttacattgtgaaatg 151
||||||||| |||||||||||||||||||| |||||| ||| ||||||||||||||| |
Sbjct: 72 tagattcat-aacatcaatatgaatgtggaaaatgctagaataacttacattgtgaaacg 14
Query: 152 gaggaagtat 161
|||| |||||
Sbjct: 13 gagggagtat 4
Score = 48.1 bits (24), Expect = 4e-05
Identities = 51/60 (85%)
Strand = Plus / Plus
Query: 7 tactccctccagttcacaatttaagtcagtgtggcatttcccacattcatattgaagtta 66
|||||||||| |||||||| ||||| | | | |||||| ||||||||||||||| ||||
Sbjct: 5 tactccctccgtttcacaatgtaagttattctagcattttccacattcatattgatgtta 64
>RF00906;MIR1122;AP008217.1/6615240-6615106 39947:Oryza sativa
Japonica Group
Length = 135
Score = 77.8 bits (39), Expect = 4e-14
Identities = 60/67 (89%)
Strand = Plus / Plus
Query: 95 attcattaacatcaatatgaatgtggagaatgctgaaatgacttacattgtgaaatggag 154
|||||||||||||||||| || ||| | |||||| ||||||||||||||||||| ||||
Sbjct: 66 attcattaacatcaatataaacgtgaaaaatgctagaatgacttacattgtgaaacggag 125
Query: 155 gaagtat 161
|||||||
Sbjct: 126 gaagtat 132
Score = 52.0 bits (26), Expect = 2e-06
Identities = 35/38 (92%)
Strand = Plus / Minus
Query: 123 aatgctgaaatgacttacattgtgaaatggaggaagta 160
|||||| |||||||||||||||||||| ||||| ||||
Sbjct: 42 aatgctaaaatgacttacattgtgaaacggagggagta 5
>RF00906;MIR1122;AAAA02015271.1/30648-30797 39946:Oryza sativa
Indica Group
Length = 150
Score = 75.8 bits (38), Expect = 2e-13
Identities = 62/70 (88%)
Strand = Plus / Minus
Query: 92 tagattcattaacatcaatatgaatgtggagaatgctgaaatgacttacattgtgaaatg 151
||||||||||| |||||||||||||||| | |||||| ||| ||||||||||||||| |
Sbjct: 73 tagattcattagcatcaatatgaatgtgaaaaatgctagaataacttacattgtgaaacg 14
Query: 152 gaggaagtat 161
|||| |||||
Sbjct: 13 gagggagtat 4
Score = 67.9 bits (34), Expect = 4e-11
Identities = 58/66 (87%)
Strand = Plus / Plus
Query: 95 attcattaacatcaatatgaatgtggagaatgctgaaatgacttacattgtgaaatggag 154
|||||||| ||||||||| ||||| || |||||| |||||| ||||||||||||| ||||
Sbjct: 81 attcattagcatcaatataaatgtagaaaatgctaaaatgatttacattgtgaaacggag 140
Query: 155 gaagta 160
| ||||
Sbjct: 141 ggagta 146
>RF00906;MIR1122;AACV01014011.1/24546-24675 39947:Oryza sativa
Japonica Group
Length = 130
Score = 75.8 bits (38), Expect = 2e-13
Identities = 59/66 (89%)
Strand = Plus / Plus
Query: 95 attcattaacatcaatatgaatgtggagaatgctgaaatgacttacattgtgaaatggag 154
||||||||| |||||||||||||| | |||||| ||||||||||||||||||| ||||
Sbjct: 61 attcattaatatcaatatgaatgttggaaatgctagaatgacttacattgtgaaacggag 120
Query: 155 gaagta 160
||||||
Sbjct: 121 gaagta 126
Score = 52.0 bits (26), Expect = 2e-06
Identities = 47/54 (87%)
Strand = Plus / Minus
Query: 19 ttcacaatttaagtcagtgtggcatttcccacattcatattgaagttaatgaat 72
|||||||| ||||||| | | |||||||| ||||||||||||| |||||||||
Sbjct: 114 ttcacaatgtaagtcattctagcatttccaacattcatattgatattaatgaat 61
Score = 50.1 bits (25), Expect = 1e-05
Identities = 46/53 (86%)
Strand = Plus / Plus
Query: 6 gtactccctccagttcacaatttaagtcagtgtggcatttcccacattcatat 58
||||||||||| |||||||| ||||||| | | ||||||||||| |||||||
Sbjct: 4 gtactccctccgtttcacaatgtaagtcattctagcatttcccacgttcatat 56
Score = 48.1 bits (24), Expect = 4e-05
Identities = 45/52 (86%)
Strand = Plus / Minus
Query: 109 atatgaatgtggagaatgctgaaatgacttacattgtgaaatggaggaagta 160
||||||| |||| |||||| ||||||||||||||||||| ||||| ||||
Sbjct: 56 atatgaacgtgggaaatgctagaatgacttacattgtgaaacggagggagta 5
>RF00906;MIR1122;AP004861.3/24137-24005 39947:Oryza sativa Japonica
Group
Length = 133
Score = 75.8 bits (38), Expect = 2e-13
Identities = 62/70 (88%)
Strand = Plus / Minus
Query: 92 tagattcattaacatcaatatgaatgtggagaatgctgaaatgacttacattgtgaaatg 151
|||||||||||||||| | ||||||||||| |||||| || | |||||||||||||| |
Sbjct: 73 tagattcattaacatctaaatgaatgtggataatgctagaaagtcttacattgtgaaacg 14
Query: 152 gaggaagtat 161
||||||||||
Sbjct: 13 gaggaagtat 4
Score = 52.0 bits (26), Expect = 2e-06
Identities = 38/42 (90%)
Strand = Plus / Plus
Query: 47 ccacattcatattgaagttaatgaatgtagacatatatatgt 88
|||||||||| | || |||||||||| |||||||||||||||
Sbjct: 45 ccacattcatttagatgttaatgaatctagacatatatatgt 86
>RF00906;MIR1122;AAAA02024103.1/2739-2606 39946:Oryza sativa Indica
Group
Length = 134
Score = 75.8 bits (38), Expect = 2e-13
Identities = 68/78 (87%)
Strand = Plus / Plus
Query: 83 atatgtatgtagattcattaacatcaatatgaatgtggagaatgctgaaatgacttacat 142
|||| ||| |||||||||||||||||||||||||||||| |||| | | ||||||||||
Sbjct: 53 atatatatctagattcattaacatcaatatgaatgtggaaaatgttagagtgacttacat 112
Query: 143 tgtgaaatggaggaagta 160
|||||| ||||| ||||
Sbjct: 113 ggtgaaacggagggagta 130
Score = 60.0 bits (30), Expect = 1e-08
Identities = 66/78 (84%)
Strand = Plus / Minus
Query: 7 tactccctccagttcacaatttaagtcagtgtggcatttcccacattcatattgaagtta 66
|||||||||| ||||| || ||||||| | | ||||| ||||||||||||||| ||||
Sbjct: 130 tactccctccgtttcaccatgtaagtcactctaacattttccacattcatattgatgtta 71
Query: 67 atgaatgtagacatatat 84
|||||| |||| ||||||
Sbjct: 70 atgaatctagatatatat 53
>RF00906;MIR1122;AC137608.2/32926-33041 39947:Oryza sativa Japonica
Group
Length = 116
Score = 75.8 bits (38), Expect = 2e-13
Identities = 60/66 (90%), Gaps = 1/66 (1%)
Strand = Plus / Minus
Query: 95 attcattaacatcaatatgaatgtggagaatgctgaaatgacttacattgtgaaatggag 154
||||||||||||||||||| ||||| | |||||| ||||||||||||||||||| ||||
Sbjct: 69 attcattaacatcaatatggatgtgaa-aatgctagaatgacttacattgtgaaacggag 11
Query: 155 gaagta 160
||||||
Sbjct: 10 gaagta 5
Score = 44.1 bits (22), Expect = 6e-04
Identities = 59/70 (84%), Gaps = 1/70 (1%)
Strand = Plus / Plus
Query: 5 tgtactccctccagttcacaatttaagtcagtgtggcatttcccacattcatattgaagt 64
|||||| ||||| |||||||| ||||||| | | |||||| | |||| |||||||| ||
Sbjct: 3 tgtacttcctccgtttcacaatgtaagtcattctagcattttc-acatccatattgatgt 61
Query: 65 taatgaatgt 74
||||||||||
Sbjct: 62 taatgaatgt 71
>RF00906;MIR1122;AACV01021901.1/3791-3658 39947:Oryza sativa
Japonica Group
Length = 134
Score = 75.8 bits (38), Expect = 2e-13
Identities = 62/70 (88%)
Strand = Plus / Minus
Query: 92 tagattcattaacatcaatatgaatgtggagaatgctgaaatgacttacattgtgaaatg 151
|||||||||||||||||||||||||||| ||| || ||||||||||||| ||||| |
Sbjct: 73 tagattcattaacatcaatatgaatgtgagaaatactagaatgacttacattatgaaacg 14
Query: 152 gaggaagtat 161
||||||||||
Sbjct: 13 gaggaagtat 4
Score = 54.0 bits (27), Expect = 6e-07
Identities = 39/43 (90%)
Strand = Plus / Plus
Query: 42 atttcccacattcatattgaagttaatgaatgtagacatatat 84
||||| |||||||||||||| |||||||||| |||||| ||||
Sbjct: 40 atttctcacattcatattgatgttaatgaatctagacaaatat 82
Score = 50.1 bits (25), Expect = 1e-05
Identities = 46/53 (86%)
Strand = Plus / Minus
Query: 7 tactccctccagttcacaatttaagtcagtgtggcatttcccacattcatatt 59
||||||||||| |||| ||| ||||||| | | ||||||| ||||||||||||
Sbjct: 130 tactccctccatttcataatgtaagtcattctagcatttctcacattcatatt 78
Score = 50.1 bits (25), Expect = 1e-05
Identities = 46/53 (86%)
Strand = Plus / Plus
Query: 108 aatatgaatgtggagaatgctgaaatgacttacattgtgaaatggaggaagta 160
|||||||||||| |||||| ||||||||||||| ||||||||||| ||||
Sbjct: 78 aatatgaatgtgagaaatgctagaatgacttacattatgaaatggagggagta 130
>RF00906;MIR1122;AAAA02008915.1/14402-14269 39946:Oryza sativa
Indica Group
Length = 134
Score = 75.8 bits (38), Expect = 2e-13
Identities = 59/66 (89%)
Strand = Plus / Minus
Query: 95 attcattaacatcaatatgaatgtggagaatgctgaaatgacttacattgtgaaatggag 154
||||||||||| ||||||||||||| |||||| ||||||||||||||||||| ||||
Sbjct: 70 attcattaacagcaatatgaatgtgagaaatgctagaatgacttacattgtgaaacggag 11
Query: 155 gaagta 160
||||||
Sbjct: 10 gaagta 5
Score = 60.0 bits (30), Expect = 1e-08
Identities = 48/54 (88%)
Strand = Plus / Plus
Query: 109 atatgaatgtggagaatgctgaaatgacttacattgtgaaatggaggaagtatg 162
|||||||| |||| |||||| ||||||||||||||||||| ||||| ||||||
Sbjct: 79 atatgaatatggaaaatgctagaatgacttacattgtgaaacggagggagtatg 132
Score = 54.0 bits (27), Expect = 6e-07
Identities = 57/67 (85%)
Strand = Plus / Plus
Query: 6 gtactccctccagttcacaatttaagtcagtgtggcatttcccacattcatattgaagtt 65
||||| ||||| |||||||| ||||||| | | ||||||| ||||||||||||| |||
Sbjct: 4 gtacttcctccgtttcacaatgtaagtcattctagcatttctcacattcatattgctgtt 63
Query: 66 aatgaat 72
|||||||
Sbjct: 64 aatgaat 70
>RF00906;MIR1122;AACV01023525.1/7783-7916 39947:Oryza sativa
Japonica Group
Length = 134
Score = 75.8 bits (38), Expect = 2e-13
Identities = 68/78 (87%)
Strand = Plus / Plus
Query: 83 atatgtatgtagattcattaacatcaatatgaatgtggagaatgctgaaatgacttacat 142
|||| ||| ||||||||||||||||||||| | ||| | |||||| ||||||||||||
Sbjct: 53 atatctatctagattcattaacatcaatatatacgtgaaaaatgctagaatgacttacat 112
Query: 143 tgtgaaatggaggaagta 160
||||||| ||||||||||
Sbjct: 113 tgtgaaacggaggaagta 130
>RF00906;MIR1122;AL663005.3/79671-79830 39947:Oryza sativa Japonica
Group
Length = 160
Score = 75.8 bits (38), Expect = 2e-13
Identities = 83/98 (84%)
Strand = Plus / Plus
Query: 63 gttaatgaatgtagacatatatatgtatgtagattcattaacatcaatatgaatgtggag 122
|||||||||| |||| | ||| || ||| |||||||||||| ||| | || ||||||||
Sbjct: 59 gttaatgaatctagaaacatacatatatctagattcattaatatctaaataaatgtggac 118
Query: 123 aatgctgaaatgacttacattgtgaaatggaggaagta 160
|||||| ||| | |||||||||||||| ||||||||||
Sbjct: 119 aatgctaaaaagtcttacattgtgaaacggaggaagta 156
Score = 58.0 bits (29), Expect = 4e-08
Identities = 83/100 (83%), Gaps = 2/100 (2%)
Strand = Plus / Minus
Query: 64 ttaatgaatgtagacatatatatgtatgtagattcattaacatcaatatgaatgtggaga 123
||||||||| |||| |||| ||||| | |||||||||||||||| |||| ||||||| |
Sbjct: 99 ttaatgaatctagatatatgtatgtttctagattcattaacatctatat--atgtggaca 42
Query: 124 atgctgaaatgacttacattgtgaaatggaggaagtatgt 163
||| | || | |||||||| ||||| ||||| |||||||
Sbjct: 41 atggtagaaagtcttacattatgaaacggagggagtatgt 2
>RF00906;MIR1122;AP002539.2/12548-12403 39947:Oryza sativa Japonica
Group
Length = 146
Score = 75.8 bits (38), Expect = 2e-13
Identities = 59/66 (89%)
Strand = Plus / Plus
Query: 98 cattaacatcaatatgaatgtggagaatgctgaaatgacttacattgtgaaatggaggaa 157
|||| |||||||||||||| ||| |||||| ||||||||||||||||||| |||||||
Sbjct: 80 cattgacatcaatatgaatatgggaaatgctagaatgacttacattgtgaaacggaggaa 139
Query: 158 gtatgt 163
||||||
Sbjct: 140 gtatgt 145
Score = 73.8 bits (37), Expect = 7e-13
Identities = 61/69 (88%)
Strand = Plus / Minus
Query: 92 tagattcattaacatcaatatgaatgtggagaatgctgaaatgacttacattgtgaaatg 151
|||||||||||| ||||||||||||||| |||||| ||||||||||||||||||| |
Sbjct: 73 tagattcattaatatcaatatgaatgtgagaaatgctagaatgacttacattgtgaaacg 14
Query: 152 gaggaagta 160
|||| ||||
Sbjct: 13 gagggagta 5
Score = 63.9 bits (32), Expect = 6e-10
Identities = 62/72 (86%)
Strand = Plus / Plus
Query: 6 gtactccctccagttcacaatttaagtcagtgtggcatttcccacattcatattgaagtt 65
||||||||||| |||||||| ||||||| | | ||||||| |||||||||||||| ||
Sbjct: 4 gtactccctccgtttcacaatgtaagtcattctagcatttctcacattcatattgatatt 63
Query: 66 aatgaatgtaga 77
||||||| ||||
Sbjct: 64 aatgaatctaga 75
Score = 46.1 bits (23), Expect = 2e-04
Identities = 38/43 (88%)
Strand = Plus / Minus
Query: 19 ttcacaatttaagtcagtgtggcatttcccacattcatattga 61
|||||||| ||||||| | | |||||||||| |||||||||||
Sbjct: 130 ttcacaatgtaagtcattctagcatttcccatattcatattga 88
>RF00906;MIR1122;AP004566.3/127143-127010 39947:Oryza sativa
Japonica Group
Length = 134
Score = 75.8 bits (38), Expect = 2e-13
Identities = 68/78 (87%)
Strand = Plus / Plus
Query: 83 atatgtatgtagattcattaacatcaatatgaatgtggagaatgctgaaatgacttacat 142
|||| ||| |||||||||||||||||||||||||||| | |||| | |||| |||||||
Sbjct: 53 atatctatctagattcattaacatcaatatgaatgtgaaaaatgatagaatggcttacat 112
Query: 143 tgtgaaatggaggaagta 160
| ||||| ||||||||||
Sbjct: 113 tatgaaacggaggaagta 130
Score = 56.0 bits (28), Expect = 2e-07
Identities = 46/52 (88%)
Strand = Plus / Plus
Query: 7 tactccctccagttcacaatttaagtcagtgtggcatttcccacattcatat 58
|||||||||| |||||||| ||||||| | | |||||||||||||||||||
Sbjct: 5 tactccctccgtttcacaatataagtcattctagcatttcccacattcatat 56
Score = 48.1 bits (24), Expect = 4e-05
Identities = 45/52 (86%)
Strand = Plus / Minus
Query: 109 atatgaatgtggagaatgctgaaatgacttacattgtgaaatggaggaagta 160
|||||||||||| |||||| ||||||||| ||||||||| ||||| ||||
Sbjct: 56 atatgaatgtgggaaatgctagaatgacttatattgtgaaacggagggagta 5
Score = 44.1 bits (22), Expect = 6e-04
Identities = 28/30 (93%)
Strand = Plus / Minus
Query: 48 cacattcatattgaagttaatgaatgtaga 77
|||||||||||||| |||||||||| ||||
Sbjct: 89 cacattcatattgatgttaatgaatctaga 60
>RF00906;MIR1122;AAAA02022015.1/31010-31136 39946:Oryza sativa
Indica Group
Length = 127
Score = 73.8 bits (37), Expect = 7e-13
Identities = 61/69 (88%)
Strand = Plus / Plus
Query: 92 tagattcattaacatcaatatgaatgtggagaatgctgaaatgacttacattgtgaaatg 151
||||||||||||||||||||||||||| | |||||| ||||||||||||| ||||| |
Sbjct: 55 tagattcattaacatcaatatgaatgtaggaaatgctagaatgacttacattatgaaacg 114
Query: 152 gaggaagta 160
|||| ||||
Sbjct: 115 gagggagta 123
Score = 61.9 bits (31), Expect = 3e-09
Identities = 61/71 (85%)
Strand = Plus / Minus
Query: 7 tactccctccagttcacaatttaagtcagtgtggcatttcccacattcatattgaagtta 66
|||||||||| |||| ||| ||||||| | | |||||||| ||||||||||||| ||||
Sbjct: 123 tactccctccgtttcataatgtaagtcattctagcatttcctacattcatattgatgtta 64
Query: 67 atgaatgtaga 77
|||||| ||||
Sbjct: 63 atgaatctaga 53
Score = 56.0 bits (28), Expect = 2e-07
Identities = 40/44 (90%)
Strand = Plus / Minus
Query: 118 tggagaatgctgaaatgacttacattgtgaaatggaggaagtat 161
|||| |||||| ||||||||||||||||||| |||||||||||
Sbjct: 47 tggaaaatgctagaatgacttacattgtgaaacggaggaagtat 4
>RF00906;MIR1122;ABRL01000382.1/8325-8450 65489:Oryza barthii
Length = 126
Score = 73.8 bits (37), Expect = 7e-13
Identities = 61/69 (88%)
Strand = Plus / Minus
Query: 92 tagattcattaacatcaatatgaatgtggagaatgctgaaatgacttacattgtgaaatg 151
|||||||||||||||| |||||||||||| |||||| || |||||||||| ||||| |
Sbjct: 73 tagattcattaacatctatatgaatgtgggcaatgctagaaagacttacattatgaaacg 14
Query: 152 gaggaagta 160
|||||||||
Sbjct: 13 gaggaagta 5
Score = 56.0 bits (28), Expect = 2e-07
Identities = 40/44 (90%)
Strand = Plus / Plus
Query: 40 gcatttcccacattcatattgaagttaatgaatgtagacatata 83
||||| ||||||||||||| || |||||||||| ||||||||||
Sbjct: 38 gcattgcccacattcatatagatgttaatgaatctagacatata 81
>RF00906;MIR1122;AP003491.3/121978-121836 39947:Oryza sativa
Japonica Group
Length = 143
Score = 73.8 bits (37), Expect = 7e-13
Identities = 61/69 (88%)
Strand = Plus / Plus
Query: 92 tagattcattaacatcaatatgaatgtggagaatgctgaaatgacttacattgtgaaatg 151
|||||| |||||||||||||| | |||||| |||||| ||||||||||||||||||| |
Sbjct: 71 tagatttattaacatcaatataattgtggaaaatgctagaatgacttacattgtgaaacg 130
Query: 152 gaggaagta 160
|||| ||||
Sbjct: 131 gagggagta 139
Score = 63.9 bits (32), Expect = 6e-10
Identities = 50/56 (89%)
Strand = Plus / Minus
Query: 105 atcaatatgaatgtggagaatgctgaaatgacttacattgtgaaatggaggaagta 160
|||||||| | |||| | |||||| |||||||||||||||||||||||||| ||||
Sbjct: 60 atcaatataattgtgaaaaatgctaaaatgacttacattgtgaaatggagggagta 5
>RF00906;MIR1122;AP004761.3/70716-70562 39947:Oryza sativa Japonica
Group
Length = 155
Score = 73.8 bits (37), Expect = 7e-13
Identities = 58/65 (89%)
Strand = Plus / Plus
Query: 96 ttcattaacatcaatatgaatgtggagaatgctgaaatgacttacattgtgaaatggagg 155
||||||||||||||||| ||||||| ||| || ||||||||||||||||||| |||||
Sbjct: 87 ttcattaacatcaatataaatgtgggaaatactagaatgacttacattgtgaaacggagg 146
Query: 156 aagta 160
|||||
Sbjct: 147 aagta 151
Score = 65.9 bits (33), Expect = 2e-10
Identities = 63/73 (86%)
Strand = Plus / Minus
Query: 89 atgtagattcattaacatcaatatgaatgtggagaatgctgaaatgacttacattgtgaa 148
|||||| ||||||||||||||||||||||||| ||| | ||||||||| ||||||||
Sbjct: 76 atgtagtttcattaacatcaatatgaatgtgggaaataatagaatgacttatattgtgaa 17
Query: 149 atggaggaagtat 161
| ||||| |||||
Sbjct: 16 acggagggagtat 4
>RF00906;MIR1122;AAAA02007268.1/12026-11902 39946:Oryza sativa
Indica Group
Length = 125
Score = 73.8 bits (37), Expect = 7e-13
Identities = 49/53 (92%)
Strand = Plus / Minus
Query: 108 aatatgaatgtggagaatgctgaaatgacttacattgtgaaatggaggaagta 160
||||||||||||| |||||| |||||||||||||||||||| ||||||||||
Sbjct: 57 aatatgaatgtgggaaatgctaaaatgacttacattgtgaaacggaggaagta 5
Score = 60.0 bits (30), Expect = 1e-08
Identities = 57/66 (86%)
Strand = Plus / Plus
Query: 96 ttcattaacatcaatatgaatgtggagaatgctgaaatgacttacattgtgaaatggagg 155
||||||||||||| ||| ||||||| |||||| ||||||||| ||||||||| |||||
Sbjct: 57 ttcattaacatcagtataaatgtgggaaatgctagaatgacttagattgtgaaacggagg 116
Query: 156 aagtat 161
|||||
Sbjct: 117 gagtat 122
Score = 58.0 bits (29), Expect = 4e-08
Identities = 56/65 (86%)
Strand = Plus / Minus
Query: 7 tactccctccagttcacaatttaagtcagtgtggcatttcccacattcatattgaagtta 66
|||||||||| |||||||| ||||||| | | |||||||||||||| ||| ||| ||||
Sbjct: 121 tactccctccgtttcacaatctaagtcattctagcatttcccacatttatactgatgtta 62
Query: 67 atgaa 71
|||||
Sbjct: 61 atgaa 57
Score = 52.0 bits (26), Expect = 2e-06
Identities = 47/54 (87%)
Strand = Plus / Plus
Query: 6 gtactccctccagttcacaatttaagtcagtgtggcatttcccacattcatatt 59
||||| ||||| |||||||| ||||||| | | ||||||||||||||||||||
Sbjct: 4 gtacttcctccgtttcacaatgtaagtcattttagcatttcccacattcatatt 57
>RF00906;MIR1122;AAAA02009878.1/28326-28188 39946:Oryza sativa
Indica Group
Length = 139
Score = 71.9 bits (36), Expect = 3e-12
Identities = 60/68 (88%)
Strand = Plus / Plus
Query: 93 agattcattaacatcaatatgaatgtggagaatgctgaaatgacttacattgtgaaatgg 152
|||||||||| |||||||||||||||| |||||| ||||||||| ||||||||| ||
Sbjct: 68 agattcattagcatcaatatgaatgtgagaaatgctagaatgacttatattgtgaaacgg 127
Query: 153 aggaagta 160
||||||||
Sbjct: 128 aggaagta 135
Score = 52.0 bits (26), Expect = 2e-06
Identities = 47/54 (87%)
Strand = Plus / Minus
Query: 19 ttcacaatttaagtcagtgtggcatttcccacattcatattgaagttaatgaat 72
|||||||| ||||||| | | ||||||| |||||||||||||| | ||||||||
Sbjct: 123 ttcacaatataagtcattctagcatttctcacattcatattgatgctaatgaat 70
Score = 50.1 bits (25), Expect = 1e-05
Identities = 46/53 (86%)
Strand = Plus / Minus
Query: 97 tcattaacatcaatatgaatgtggagaatgctgaaatgacttacattgtgaaa 149
|||||| |||||||||||||||| |||||| |||||||||||| ||||||
Sbjct: 68 tcattagcatcaatatgaatgtgagaaatgctagaatgacttacatcgtgaaa 16
>RF00906;MIR1122;AACV01014253.1/3077-3238 39947:Oryza sativa
Japonica Group
Length = 162
Score = 71.9 bits (36), Expect = 3e-12
Identities = 99/120 (82%)
Strand = Plus / Minus
Query: 41 catttcccacattcatattgaagttaatgaatgtagacatatatatgtatgtagattcat 100
|||| ||||||||||||| || | |||||||| ||||||| ||| ||| |||||| ||
Sbjct: 124 cattgcccacattcatatagatgctaatgaatctagacattattatatatatagatttat 65
Query: 101 taacatcaatatgaatgtggagaatgctgaaatgacttacattgtgaaatggaggaagta 160
|| |||| |||||||||||| |||||| || | |||||||| ||||| ||||||||||
Sbjct: 64 tagcatctatatgaatgtgggtaatgctataaagtcttacattatgaaacggaggaagta 5
Score = 52.0 bits (26), Expect = 2e-06
Identities = 59/70 (84%)
Strand = Plus / Plus
Query: 92 tagattcattaacatcaatatgaatgtggagaatgctgaaatgacttacattgtgaaatg 151
||||||||||| |||| |||||||||||| |||| | || | |||||||||||||| |
Sbjct: 90 tagattcattagcatctatatgaatgtgggcaatgttagaaagtcttacattgtgaaacg 149
Query: 152 gaggaagtat 161
|||| |||||
Sbjct: 150 gagggagtat 159
>RF00906;MIR1122;AL731751.4/92313-92451 4530:Oryza sativa (rice)
Length = 139
Score = 71.9 bits (36), Expect = 3e-12
Identities = 60/68 (88%)
Strand = Plus / Plus
Query: 93 agattcattaacatcaatatgaatgtggagaatgctgaaatgacttacattgtgaaatgg 152
||||||||||| |||||| ||||||||| |||||| ||||||||| ||||||||| ||
Sbjct: 68 agattcattaatatcaatgtgaatgtgggaaatgctagaatgacttatattgtgaaacgg 127
Query: 153 aggaagta 160
||||||||
Sbjct: 128 aggaagta 135
Score = 52.0 bits (26), Expect = 2e-06
Identities = 47/54 (87%)
Strand = Plus / Minus
Query: 19 ttcacaatttaagtcagtgtggcatttcccacattcatattgaagttaatgaat 72
|||||||| ||||||| | | |||||||||||||||| ||||| |||||||||
Sbjct: 123 ttcacaatataagtcattctagcatttcccacattcacattgatattaatgaat 70
>RF00906;MIR1122;AAAA02024119.1/11927-11764 39946:Oryza sativa
Indica Group
Length = 164
Score = 71.9 bits (36), Expect = 3e-12
Identities = 72/83 (86%), Gaps = 2/83 (2%)
Strand = Plus / Plus
Query: 40 gcatttcccacattcatattgaagttaatgaatgtagacatatatatgtatgta--gatt 97
||||| ||||||||||||| || |||||||||| || | |||||| ||| |||| ||||
Sbjct: 38 gcattgcccacattcatatagatgttaatgaatctatatatatatgtgtgtgtatagatt 97
Query: 98 cattaacatcaatatgaatgtgg 120
|||||||||| ||||||||||||
Sbjct: 98 cattaacatctatatgaatgtgg 120
Score = 65.9 bits (33), Expect = 2e-10
Identities = 102/124 (82%), Gaps = 2/124 (1%)
Strand = Plus / Minus
Query: 40 gcatttcccacattcatattgaagttaatgaatgtagacatata--tatgtatgtagatt 97
||||| ||||||||||||| || |||||||||| || ||| | | ||| ||| ||||||
Sbjct: 127 gcattgcccacattcatatagatgttaatgaatctatacacacacatatatatatagatt 68
Query: 98 cattaacatcaatatgaatgtggagaatgctgaaatgacttacattgtgaaatggaggaa 157
|||||||||| |||||||||||| |||||| || | |||| | | ||||| |||||||
Sbjct: 67 cattaacatctatatgaatgtgggcaatgctagaaagtcttataatatgaaacggaggaa 8
Query: 158 gtat 161
||||
Sbjct: 7 gtat 4
>RF00906;MIR1122;AP005701.3/56841-57000 39947:Oryza sativa Japonica
Group
Length = 160
Score = 71.9 bits (36), Expect = 3e-12
Identities = 123/151 (81%), Gaps = 2/151 (1%)
Strand = Plus / Minus
Query: 7 tactccctccagttcacaatttaagtcagtgtggcatttcccacattcatattgaagtta 66
|||||||||| |||||||| ||||||| | | | ||| ||||||||| ||| || ||
Sbjct: 156 tactccctccgtttcacaatataagtcattctaggattgcccacattcttatagatacta 97
Query: 67 atgaatgtagacatatatatgtatgtagattcattaacatcaatatgaatgtggagaatg 126
|||||| ||| || |||||||| ||||||||||||||| |||||||||||| ||||
Sbjct: 96 atgaatctagccacatatatgtcc--agattcattaacatctatatgaatgtgggcaatg 39
Query: 127 ctgaaatgacttacattgtgaaatggaggaa 157
|| ||||||||| ||| ||||| |||||||
Sbjct: 38 ctagaatgacttatattatgaaacggaggaa 8
Score = 61.9 bits (31), Expect = 3e-09
Identities = 115/142 (80%), Gaps = 2/142 (1%)
Strand = Plus / Plus
Query: 19 ttcacaatttaagtcagtgtggcatttcccacattcatattgaagttaatgaatgtagac 78
|||| ||| ||||||| | | ||||| ||||||||||||| || |||||||||| | |||
Sbjct: 17 ttcataatataagtcattctagcattgcccacattcatatagatgttaatgaatctggac 76
Query: 79 atatatatgtatgtagattcattaacatcaatatgaatgtggagaatgctgaaatgactt 138
|||||||| ||||||||||| ||| ||| |||||||| ||| || ||||||||
Sbjct: 77 --atatatgtggctagattcattagtatctataagaatgtgggcaatcctagaatgactt 134
Query: 139 acattgtgaaatggaggaagta 160
| ||||||||| ||||| ||||
Sbjct: 135 atattgtgaaacggagggagta 156
>RF00906;MIR1122;AP005308.3/147987-147826 39947:Oryza sativa
Japonica Group
Length = 162
Score = 69.9 bits (35), Expect = 1e-11
Identities = 65/75 (86%)
Strand = Plus / Plus
Query: 41 catttcccacattcatattgaagttaatgaatgtagacatatatatgtatgtagattcat 100
|||| ||||||||||||| | || ||||||| ||||||||||||||| | |||||||||
Sbjct: 39 cattgcccacattcatatatatgtcaatgaatctagacatatatatgtgtttagattcat 98
Query: 101 taacatcaatatgaa 115
| ||||| |||||||
Sbjct: 99 tgacatctatatgaa 113
>RF00906;MIR1122;AAAA02006407.1/37604-37445 39946:Oryza sativa
Indica Group
Length = 160
Score = 69.9 bits (35), Expect = 1e-11
Identities = 92/110 (83%), Gaps = 2/110 (1%)
Strand = Plus / Plus
Query: 51 attcatattgaagttaatgaatgtagacatatatatgtatgtagattcattaacatcaat 110
||||||||||| |||||||||| ||| ||||| || | ||||||||||||||| ||
Sbjct: 49 attcatattgatgttaatgaatctagg--tatatgcgtgtctagattcattaacatttat 106
Query: 111 atgaatgtggagaatgctgaaatgacttacattgtgaaatggaggaagta 160
||||||||||| |||||| || | |||||||| ||||| ||||||||||
Sbjct: 107 atgaatgtggacaatgctagaaagtcttacattatgaaacggaggaagta 156
Score = 50.1 bits (25), Expect = 1e-05
Identities = 25/25 (100%)
Strand = Plus / Minus
Query: 92 tagattcattaacatcaatatgaat 116
|||||||||||||||||||||||||
Sbjct: 73 tagattcattaacatcaatatgaat 49
>RF00906;MIR1122;AAAA02007431.1/93040-92879 39946:Oryza sativa
Indica Group
Length = 162
Score = 69.9 bits (35), Expect = 1e-11
Identities = 95/115 (82%)
Strand = Plus / Plus
Query: 46 cccacattcatattgaagttaatgaatgtagacatatatatgtatgtagattcattaaca 105
|||| |||||||| || |||||||||| |||||| |||| | | ||||||||||||||
Sbjct: 44 cccatattcatatagatgttaatgaatttagacacgcatatatgtctagattcattaaca 103
Query: 106 tcaatatgaatgtggagaatgctgaaatgacttacattgtgaaatggaggaagta 160
|| |||||||||||| ||| || || | |||||||||||||| ||||| ||||
Sbjct: 104 tctatatgaatgtgggcaatactagaaagtcttacattgtgaaacggagggagta 158
Score = 69.9 bits (35), Expect = 1e-11
Identities = 62/71 (87%)
Strand = Plus / Minus
Query: 46 cccacattcatattgaagttaatgaatgtagacatatatatgtatgtagattcattaaca 105
||||||||||||| || |||||||||| ||||||||||| || | || |||||||||||
Sbjct: 119 cccacattcatatagatgttaatgaatctagacatatatgcgtgtctaaattcattaaca 60
Query: 106 tcaatatgaat 116
|| ||||||||
Sbjct: 59 tctatatgaat 49
>RF00906;MIR1122;AP003298.3/138453-138292 39947:Oryza sativa
Japonica Group
Length = 162
Score = 69.9 bits (35), Expect = 1e-11
Identities = 89/107 (83%)
Strand = Plus / Plus
Query: 54 catattgaagttaatgaatgtagacatatatatgtatgtagattcattaacatcaatatg 113
||||| || |||||||||| || ||| ||| || | | |||||||||||||||| | |||
Sbjct: 52 catatagacgttaatgaatctaaacacatacatatgtctagattcattaacatctaaatg 111
Query: 114 aatgtggagaatgctgaaatgacttacattgtgaaatggaggaagta 160
||| ||| |||||| ||| | |||||||||||||| ||||||||||
Sbjct: 112 aatatgggcaatgctaaaaagtcttacattgtgaaacggaggaagta 158
Score = 65.9 bits (33), Expect = 2e-10
Identities = 99/121 (81%)
Strand = Plus / Minus
Query: 40 gcatttcccacattcatattgaagttaatgaatgtagacatatatatgtatgtagattca 99
||||| |||| |||||| | || |||||||||| ||||||||| ||||| | ||||||||
Sbjct: 125 gcattgcccatattcatttagatgttaatgaatctagacatatgtatgtgtttagattca 66
Query: 100 ttaacatcaatatgaatgtggagaatgctgaaatgacttacattgtgaaatggaggaagt 159
||||| || ||||| || || |||||| || | |||||||||||||| ||||| |||
Sbjct: 65 ttaacgtctatatgtatatgagcaatgctagaaagtcttacattgtgaaacggagggagt 6
Query: 160 a 160
|
Sbjct: 5 a 5
>RF00906;MIR1122;AAAA02027852.1/19341-19475 39946:Oryza sativa
Indica Group
Length = 135
Score = 69.9 bits (35), Expect = 1e-11
Identities = 62/71 (87%)
Strand = Plus / Plus
Query: 92 tagattcattaacatcaatatgaatgtggagaatgctgaaatgacttacattgtgaaatg 151
||||||||||| |||||||||||| ||| | |||| | ||||||||||||||||||| |
Sbjct: 63 tagattcattagcatcaatatgaacgtgaaaaatgatagaatgacttacattgtgaaacg 122
Query: 152 gaggaagtatg 162
|||| ||||||
Sbjct: 123 gagggagtatg 133
>RF00906;MIR1122;AP000492.1/101668-101829 39947:Oryza sativa
Japonica Group
Length = 162
Score = 69.9 bits (35), Expect = 1e-11
Identities = 71/83 (85%)
Strand = Plus / Plus
Query: 38 tggcatttcccacattcatattgaagttaatgaatgtagacatatatatgtatgtagatt 97
||||||| ||||||||||||| | |||||| ||| ||||||||||||||| |||||
Sbjct: 36 tggcattgcccacattcatatatatgttaataaatctagacatatatatgtgccaagatt 95
Query: 98 cattaacatcaatatgaatgtgg 120
||||||||| ||||||||||||
Sbjct: 96 cattaacatatatatgaatgtgg 118
Score = 50.1 bits (25), Expect = 1e-05
Identities = 67/81 (82%)
Strand = Plus / Minus
Query: 40 gcatttcccacattcatattgaagttaatgaatgtagacatatatatgtatgtagattca 99
||||| ||||||||||||| | |||||||||| | | || |||||| | | |||||| |
Sbjct: 125 gcattgcccacattcatatatatgttaatgaatcttggcacatatatatgtctagattta 66
Query: 100 ttaacatcaatatgaatgtgg 120
||||||| ||||||||||||
Sbjct: 65 ttaacatatatatgaatgtgg 45
>RF00906;MIR1122;AC098572.2/23110-23250 39947:Oryza sativa Japonica
Group
Length = 141
Score = 67.9 bits (34), Expect = 4e-11
Identities = 61/70 (87%)
Strand = Plus / Plus
Query: 92 tagattcattaacatcaatatgaatgtggagaatgctgaaatgacttacattgtgaaatg 151
|||||| ||||||||| ||||||||||||| |||||| ||| ||||||||| ||||| |
Sbjct: 69 tagatttattaacatctatatgaatgtggacaatgctagaataacttacattatgaaacg 128
Query: 152 gaggaagtat 161
|||| |||||
Sbjct: 129 gagggagtat 138
>RF00906;MIR1122;AAAA02004640.1/4833-4692 39946:Oryza sativa Indica
Group
Length = 142
Score = 67.9 bits (34), Expect = 4e-11
Identities = 61/70 (87%)
Strand = Plus / Minus
Query: 92 tagattcattaacatcaatatgaatgtggagaatgctgaaatgacttacattgtgaaatg 151
||||||||||| ||||| |||||||||||| |||||| ||||||||| ||| |||||
Sbjct: 73 tagattcattagcatcagtatgaatgtggaaaatgctagaatgacttatattatgaaaca 14
Query: 152 gaggaagtat 161
||||||||||
Sbjct: 13 gaggaagtat 4
Score = 61.9 bits (31), Expect = 3e-09
Identities = 49/55 (89%)
Strand = Plus / Minus
Query: 7 tactccctccagttcacaatttaagtcagtgtggcatttcccacattcatattga 61
|||||||||| |||| ||| ||||||| ||| ||||||||||||||||||||||
Sbjct: 138 tactccctccgtttcataatgtaagtcattgtagcatttcccacattcatattga 84
Score = 60.0 bits (30), Expect = 1e-08
Identities = 51/58 (87%)
Strand = Plus / Plus
Query: 103 acatcaatatgaatgtggagaatgctgaaatgacttacattgtgaaatggaggaagta 160
|||||||||||||||||| |||||| ||||||||||||| ||||| ||||| ||||
Sbjct: 81 acatcaatatgaatgtgggaaatgctacaatgacttacattatgaaacggagggagta 138
>RF00906;MIR1122;FJ266024.1/267591-267730 39946:Oryza sativa Indica
Group
Length = 140
Score = 67.9 bits (34), Expect = 4e-11
Identities = 55/62 (88%)
Strand = Plus / Minus
Query: 99 attaacatcaatatgaatgtggagaatgctgaaatgacttacattgtgaaatggaggaag 158
||||| |||||||| |||||||| |||||| ||||||||||||||||||| ||||| ||
Sbjct: 66 attaatatcaatataaatgtggaaaatgctagaatgacttacattgtgaaacggagggag 7
Query: 159 ta 160
||
Sbjct: 6 ta 5
Score = 65.9 bits (33), Expect = 2e-10
Identities = 51/57 (89%)
Strand = Plus / Plus
Query: 105 atcaatatgaatgtggagaatgctgaaatgacttacattgtgaaatggaggaagtat 161
|||||||||||||||| |||||| ||||||||| ||||||||| |||||||||||
Sbjct: 81 atcaatatgaatgtgggaaatgctagaatgacttatattgtgaaacggaggaagtat 137
Score = 54.0 bits (27), Expect = 6e-07
Identities = 39/43 (90%)
Strand = Plus / Minus
Query: 19 ttcacaatttaagtcagtgtggcatttcccacattcatattga 61
|||||||| ||||||| | | ||||||||||||||||||||||
Sbjct: 124 ttcacaatataagtcattctagcatttcccacattcatattga 82
>RF00906;MIR1122;AAAA02007011.1/474-313 39946:Oryza sativa Indica
Group
Length = 162
Score = 67.9 bits (34), Expect = 4e-11
Identities = 100/122 (81%)
Strand = Plus / Minus
Query: 40 gcatttcccacattcatattgaagttaatgaatgtagacatatatatgtatgtagattca 99
||||| ||||||||||||| || | ||||||| || |||||||| ||| | ||||||||
Sbjct: 125 gcattgcccacattcatatagatatcaatgaatctaaacatatatgtgtgtctagattca 66
Query: 100 ttaacatcaatatgaatgtggagaatgctgaaatgacttacattgtgaaatggaggaagt 159
||||||| |||||||||||| || ||| || | |||||||| ||||| ||||||||
Sbjct: 65 ttaacatatatatgaatgtgggcaaggctagaaagtcttacattatgaaaccgaggaagt 6
Query: 160 at 161
||
Sbjct: 5 at 4
Score = 63.9 bits (32), Expect = 6e-10
Identities = 86/104 (82%)
Strand = Plus / Plus
Query: 46 cccacattcatattgaagttaatgaatgtagacatatatatgtatgtagattcattaaca 105
||||||||||||| | |||||||||| |||||| | |||| | | |||||||||| | |
Sbjct: 44 cccacattcatatatatgttaatgaatctagacacacatatatgtttagattcattgata 103
Query: 106 tcaatatgaatgtggagaatgctgaaatgacttacattgtgaaa 149
|| |||||||||||| |||||| ||| | |||||||| |||||
Sbjct: 104 tctatatgaatgtgggcaatgctaaaaagtcttacattatgaaa 147
>RF00906;MIR1122;AC037425.7/61774-61921 4530:Oryza sativa (rice)
Length = 148
Score = 67.9 bits (34), Expect = 4e-11
Identities = 55/62 (88%)
Strand = Plus / Minus
Query: 99 attaacatcaatatgaatgtggagaatgctgaaatgacttacattgtgaaatggaggaag 158
|||||||||| |||||||||| | |||||| ||||||||||||| ||||| ||||||||
Sbjct: 66 attaacatcactatgaatgtgaaaaatgctagaatgacttacattatgaaacggaggaag 7
Query: 159 ta 160
||
Sbjct: 6 ta 5
Score = 58.0 bits (29), Expect = 4e-08
Identities = 59/69 (85%)
Strand = Plus / Plus
Query: 81 atatatgtatgtagattcattaacatcaatatgaatgtggagaatgctgaaatgacttac 140
|||||| ||| |||||| |||||||||| ||||||||||| ||| || ||||||||||
Sbjct: 65 atatatatatctagatttattaacatcactatgaatgtgggaaatactagaatgacttac 124
Query: 141 attgtgaaa 149
||| |||||
Sbjct: 125 attatgaaa 133
Score = 50.1 bits (25), Expect = 1e-05
Identities = 40/45 (88%)
Strand = Plus / Minus
Query: 42 atttcccacattcatattgaagttaatgaatgtagacatatatat 86
|||||||||||||||| ||| |||||| ||| |||| ||||||||
Sbjct: 109 atttcccacattcatagtgatgttaataaatctagatatatatat 65
>RF00906;MIR1122;AP005460.3/28792-28659 39947:Oryza sativa Japonica
Group
Length = 134
Score = 67.9 bits (34), Expect = 4e-11
Identities = 49/54 (90%)
Strand = Plus / Plus
Query: 108 aatatgaatgtggagaatgctgaaatgacttacattgtgaaatggaggaagtat 161
||||||||||||| |||||| ||||||||||||||||||| |||||||||||
Sbjct: 78 aatatgaatgtgggaaatgctagaatgacttacattgtgaaacggaggaagtat 131
Score = 52.0 bits (26), Expect = 2e-06
Identities = 56/66 (84%)
Strand = Plus / Minus
Query: 19 ttcacaatttaagtcagtgtggcatttcccacattcatattgaagttaatgaatgtagac 78
|||||||| ||||||| | | |||||||||||||||||||| |||||||| |||||
Sbjct: 118 ttcacaatgtaagtcattctagcatttcccacattcatattagtactaatgaatctagac 59
Query: 79 atatat 84
||||||
Sbjct: 58 atatat 53
Score = 48.1 bits (24), Expect = 4e-05
Identities = 45/52 (86%)
Strand = Plus / Minus
Query: 109 atatgaatgtggagaatgctgaaatgacttacattgtgaaatggaggaagta 160
||||||||||| |||||| ||| ||||||||||||||| ||||||||||
Sbjct: 56 atatgaatgtgagaaatgctagaataacttacattgtgaaacggaggaagta 5
>RF00906;MIR1122;AACV01004004.1/73579-73692 39947:Oryza sativa
Japonica Group
Length = 114
Score = 67.9 bits (34), Expect = 4e-11
Identities = 64/74 (86%)
Strand = Plus / Plus
Query: 47 ccacattcatattgaagttaatgaatgtagacatatatatgtatgtagattcattaacat 106
|||||||||||| | |||||||||| ||||||| ||| ||| |||||||||||||||
Sbjct: 21 ccacattcatatatatgttaatgaatctagacatgtatgtgtgcctagattcattaacat 80
Query: 107 caatatgaatgtgg 120
| ||||||||||||
Sbjct: 81 ctatatgaatgtgg 94
Score = 65.9 bits (33), Expect = 2e-10
Identities = 75/89 (84%)
Strand = Plus / Minus
Query: 40 gcatttcccacattcatattgaagttaatgaatgtagacatatatatgtatgtagattca 99
||||| ||||||||||||| || |||||||||| ||| || | ||| | | ||||||||
Sbjct: 101 gcattgcccacattcatatagatgttaatgaatctaggcacacatacatgtctagattca 42
Query: 100 ttaacatcaatatgaatgtggagaatgct 128
||||||| ||||||||||||| ||||||
Sbjct: 41 ttaacatatatatgaatgtggacaatgct 13
>RF00906;MIR1122;AACV01010803.1/31756-31905 39947:Oryza sativa
Japonica Group
Length = 150
Score = 67.9 bits (34), Expect = 4e-11
Identities = 58/66 (87%)
Strand = Plus / Plus
Query: 95 attcattaacatcaatatgaatgtggagaatgctgaaatgacttacattgtgaaatggag 154
|||||||| ||||||||||||||| || |||||| ||||| ||||||||||||| ||||
Sbjct: 81 attcattagcatcaatatgaatgtagaaaatgctagaatgatttacattgtgaaacggag 140
Query: 155 gaagta 160
| ||||
Sbjct: 141 ggagta 146
Score = 60.0 bits (30), Expect = 1e-08
Identities = 60/70 (85%)
Strand = Plus / Minus
Query: 92 tagattcattaacatcaatatgaatgtggagaatgctgaaatgacttacattgtgaaatg 151
||||||||||| ||||||||| ||| || | ||| || ||||||||||||||||||| |
Sbjct: 73 tagattcattagcatcaatataaatatgaaaaatactagaatgacttacattgtgaaacg 14
Query: 152 gaggaagtat 161
|||| |||||
Sbjct: 13 gagggagtat 4
Score = 46.1 bits (23), Expect = 2e-04
Identities = 59/71 (83%)
Strand = Plus / Minus
Query: 7 tactccctccagttcacaatttaagtcagtgtggcatttcccacattcatattgaagtta 66
|||||||||| |||||||| ||| ||| | | |||||| | ||||||||||||| | ||
Sbjct: 146 tactccctccgtttcacaatgtaaatcattctagcattttctacattcatattgatgcta 87
Query: 67 atgaatgtaga 77
|||||| ||||
Sbjct: 86 atgaatttaga 76
>RF00906;MIR1122;AP003023.2/81435-81277 39947:Oryza sativa Japonica
Group
Length = 159
Score = 67.9 bits (34), Expect = 4e-11
Identities = 67/77 (87%), Gaps = 2/77 (2%)
Strand = Plus / Plus
Query: 46 cccacattcatattgaagttaatgaatgtagacatatatatgtatgta--gattcattaa 103
||||||||||||| || |||||||||| || ||| | |||||| |||| ||||||||||
Sbjct: 44 cccacattcatatagatgttaatgaatctatacacacatatgtgtgtatagattcattaa 103
Query: 104 catcaatatgaatgtgg 120
|||| ||||||||||||
Sbjct: 104 catctatatgaatgtgg 120
Score = 67.9 bits (34), Expect = 4e-11
Identities = 67/77 (87%), Gaps = 2/77 (2%)
Strand = Plus / Minus
Query: 46 cccacattcatattgaagttaatgaatgtagacatatatatgtatgta--gattcattaa 103
||||||||||||| || |||||||||| || ||| | |||||| |||| ||||||||||
Sbjct: 121 cccacattcatatagatgttaatgaatctatacacacatatgtgtgtatagattcattaa 62
Query: 104 catcaatatgaatgtgg 120
|||| ||||||||||||
Sbjct: 61 catctatatgaatgtgg 45
>RF00906;MIR1122;CR855219.1/67862-67748 4530:Oryza sativa (rice)
Length = 115
Score = 67.9 bits (34), Expect = 4e-11
Identities = 52/58 (89%)
Strand = Plus / Minus
Query: 103 acatcaatatgaatgtggagaatgctgaaatgacttacattgtgaaatggaggaagta 160
||||||||||||||||| |||||| ||||||||||||||||||| ||||||||||
Sbjct: 62 acatcaatatgaatgtgagaaatgctagaatgacttacattgtgaaacggaggaagta 5
Score = 46.1 bits (23), Expect = 2e-04
Identities = 38/43 (88%)
Strand = Plus / Plus
Query: 19 ttcacaatttaagtcagtgtggcatttcccacattcatattga 61
|||||||| ||||||| | | ||||||| ||||||||||||||
Sbjct: 17 ttcacaatgtaagtcattctagcatttctcacattcatattga 59
>RF00906;MIR1122;AAAA02035929.1/12415-12280 39946:Oryza sativa
Indica Group
Length = 136
Score = 67.9 bits (34), Expect = 4e-11
Identities = 52/58 (89%)
Strand = Plus / Plus
Query: 103 acatcaatatgaatgtggagaatgctgaaatgacttacattgtgaaatggaggaagta 160
|||||||||||||||||| |||||| |||| |||||||||||||| ||||||||||
Sbjct: 75 acatcaatatgaatgtgggaaatgctagaatgtcttacattgtgaaacggaggaagta 132
Score = 60.0 bits (30), Expect = 1e-08
Identities = 60/70 (85%)
Strand = Plus / Minus
Query: 92 tagattcattaacatcaatatgaatgtggagaatgctgaaatgacttacattgtgaaatg 151
||||||||||| ||||||||| ||| ||| |||||| |||||||||||||||| || |
Sbjct: 73 tagattcattagcatcaatataaatatgggaaatgctataatgacttacattgtggaacg 14
Query: 152 gaggaagtat 161
|||| |||||
Sbjct: 13 gagggagtat 4
Score = 46.1 bits (23), Expect = 2e-04
Identities = 38/43 (88%)
Strand = Plus / Minus
Query: 19 ttcacaatttaagtcagtgtggcatttcccacattcatattga 61
|||||||| |||| || | | ||||||||||||||||||||||
Sbjct: 120 ttcacaatgtaagacattctagcatttcccacattcatattga 78
>RF00906;MIR1122;AACV01015348.1/13831-13958 39947:Oryza sativa
Japonica Group
Length = 128
Score = 67.9 bits (34), Expect = 4e-11
Identities = 61/70 (87%)
Strand = Plus / Minus
Query: 92 tagattcattaacatcaatatgaatgtggagaatgctgaaatgacttacattgtgaaatg 151
|||||| ||||||||| ||||||||||||| |||||| || | |||||||| |||||||
Sbjct: 73 tagatttattaacatctatatgaatgtggacaatgctagaaagtcttacattatgaaatg 14
Query: 152 gaggaagtat 161
|||| |||||
Sbjct: 13 gagggagtat 4
>RF00906;MIR1122;AAAA02033484.1/80878-80987 39946:Oryza sativa
Indica Group
Length = 110
Score = 65.9 bits (33), Expect = 2e-10
Identities = 60/69 (86%)
Strand = Plus / Plus
Query: 92 tagattcattaacatcaatatgaatgtggagaatgctgaaatgacttacattgtgaaatg 151
||||||||||| |||||||| ||| || | |||||| |||||| |||||||||||||||
Sbjct: 38 tagattcattagtatcaatataaatatgaaaaatgctaaaatgatttacattgtgaaatg 97
Query: 152 gaggaagta 160
|||| ||||
Sbjct: 98 gagggagta 106
Score = 54.0 bits (27), Expect = 6e-07
Identities = 30/31 (96%)
Strand = Plus / Minus
Query: 131 aatgacttacattgtgaaatggaggaagtat 161
||||||||||||||||||| |||||||||||
Sbjct: 34 aatgacttacattgtgaaacggaggaagtat 4
>RF00906;MIR1122;AACV01010533.1/25208-25336 39947:Oryza sativa
Japonica Group
Length = 129
Score = 65.9 bits (33), Expect = 2e-10
Identities = 51/57 (89%)
Strand = Plus / Minus
Query: 105 atcaatatgaatgtggagaatgctgaaatgacttacattgtgaaatggaggaagtat 161
||||||||||||||||| |||||| ||| ||||||||||||||| ||||| |||||
Sbjct: 60 atcaatatgaatgtggaaaatgctagaataacttacattgtgaaacggagggagtat 4
Score = 63.9 bits (32), Expect = 6e-10
Identities = 50/56 (89%)
Strand = Plus / Plus
Query: 105 atcaatatgaatgtggagaatgctgaaatgacttacattgtgaaatggaggaagta 160
||||||||||||||||| |||||| ||| ||||||||||||||| ||||| ||||
Sbjct: 70 atcaatatgaatgtggaaaatgctagaataacttacattgtgaaacggagggagta 125
Score = 46.1 bits (23), Expect = 2e-04
Identities = 47/55 (85%)
Strand = Plus / Plus
Query: 7 tactccctccagttcacaatttaagtcagtgtggcatttcccacattcatattga 61
|||||||||| |||||||| ||||| | | | |||||| |||||||||||||||
Sbjct: 5 tactccctccgtttcacaatgtaagttattctagcattttccacattcatattga 59
Score = 46.1 bits (23), Expect = 2e-04
Identities = 47/55 (85%)
Strand = Plus / Minus
Query: 7 tactccctccagttcacaatttaagtcagtgtggcatttcccacattcatattga 61
|||||||||| |||||||| ||||| | | | |||||| |||||||||||||||
Sbjct: 125 tactccctccgtttcacaatgtaagttattctagcattttccacattcatattga 71
>RF00906;MIR1122;AAAA02033815.1/24477-24365 39946:Oryza sativa
Indica Group
Length = 113
Score = 65.9 bits (33), Expect = 2e-10
Identities = 48/53 (90%)
Strand = Plus / Plus
Query: 108 aatatgaatgtggagaatgctgaaatgacttacattgtgaaatggaggaagta 160
||||||||||||| ||| || |||||||||||||||||||| ||||||||||
Sbjct: 57 aatatgaatgtgggaaatactaaaatgacttacattgtgaaacggaggaagta 109
Score = 46.1 bits (23), Expect = 2e-04
Identities = 29/31 (93%)
Strand = Plus / Minus
Query: 130 aaatgacttacattgtgaaatggaggaagta 160
|||||||||||||||||||| ||||| ||||
Sbjct: 35 aaatgacttacattgtgaaacggagggagta 5
>RF00906;MIR1122;AP003824.3/55428-55285 39947:Oryza sativa Japonica
Group
Length = 144
Score = 65.9 bits (33), Expect = 2e-10
Identities = 60/69 (86%)
Strand = Plus / Plus
Query: 92 tagattcattaacatcaatatgaatgtggagaatgctgaaatgacttacattgtgaaatg 151
|||||| ||||||||| ||||||||||||| |||||| || | |||||||||||||| |
Sbjct: 72 tagatttattaacatctatatgaatgtggacaatgctagaaagtcttacattgtgaaacg 131
Query: 152 gaggaagta 160
|||| ||||
Sbjct: 132 gagggagta 140
Score = 54.0 bits (27), Expect = 6e-07
Identities = 51/59 (86%)
Strand = Plus / Minus
Query: 103 acatcaatatgaatgtggagaatgctgaaatgacttacattgtgaaatggaggaagtat 161
||||| |||||||| |||| |||||| ||| | |||||||||||||| ||||| |||||
Sbjct: 62 acatctatatgaatatggataatgctaaaaagtcttacattgtgaaacggagggagtat 4
>RF00906;MIR1122;AL606444.3/32464-32336 39947:Oryza sativa Japonica
Group
Length = 129
Score = 65.9 bits (33), Expect = 2e-10
Identities = 51/57 (89%)
Strand = Plus / Minus
Query: 105 atcaatatgaatgtggagaatgctgaaatgacttacattgtgaaatggaggaagtat 161
||||||||||||||||| |||||| ||| ||||||||||||||| ||||| |||||
Sbjct: 60 atcaatatgaatgtggaaaatgctagaataacttacattgtgaaacggagggagtat 4
Score = 58.0 bits (29), Expect = 4e-08
Identities = 49/56 (87%)
Strand = Plus / Plus
Query: 105 atcaatatgaatgtggagaatgctgaaatgacttacattgtgaaatggaggaagta 160
|||||||||||||||| |||||| ||| ||||||||||||||| ||||| ||||
Sbjct: 70 atcaatatgaatgtggnaaatgctagaataacttacattgtgaaacggagggagta 125
Score = 48.1 bits (24), Expect = 4e-05
Identities = 47/55 (85%)
Strand = Plus / Minus
Query: 7 tactccctccagttcacaatttaagtcagtgtggcatttcccacattcatattga 61
|||||||||| |||||||| ||||| | | | |||||| |||||||||||||||
Sbjct: 125 tactccctccgtttcacaatgtaagttattctagcatttnccacattcatattga 71
Score = 46.1 bits (23), Expect = 2e-04
Identities = 47/55 (85%)
Strand = Plus / Plus
Query: 7 tactccctccagttcacaatttaagtcagtgtggcatttcccacattcatattga 61
|||||||||| |||||||| ||||| | | | |||||| |||||||||||||||
Sbjct: 5 tactccctccgtttcacaatgtaagttattctagcattttccacattcatattga 59
>RF00906;MIR1122;FJ266028.1/154978-155117 4529:Oryza rufipogon
Length = 140
Score = 65.9 bits (33), Expect = 2e-10
Identities = 51/57 (89%)
Strand = Plus / Plus
Query: 105 atcaatatgaatgtggagaatgctgaaatgacttacattgtgaaatggaggaagtat 161
|||||||||||||||| |||||| ||||||||| ||||||||| |||||||||||
Sbjct: 81 atcaatatgaatgtgggaaatgctagaatgacttatattgtgaaacggaggaagtat 137
Score = 60.0 bits (30), Expect = 1e-08
Identities = 54/62 (87%)
Strand = Plus / Minus
Query: 99 attaacatcaatatgaatgtggagaatgctgaaatgacttacattgtgaaatggaggaag 158
||||| |||||||| ||||||| |||||| ||||||||||||||||||| ||||| ||
Sbjct: 66 attaatatcaatataaatgtgggaaatgctagaatgacttacattgtgaaacggagggag 7
Query: 159 ta 160
||
Sbjct: 6 ta 5
Score = 54.0 bits (27), Expect = 6e-07
Identities = 48/55 (87%)
Strand = Plus / Plus
Query: 7 tactccctccagttcacaatttaagtcagtgtggcatttcccacattcatattga 61
|||||||||| |||||||| ||||||| | | |||||||||||||| |||||||
Sbjct: 5 tactccctccgtttcacaatgtaagtcattctagcatttcccacatttatattga 59
Score = 54.0 bits (27), Expect = 6e-07
Identities = 39/43 (90%)
Strand = Plus / Minus
Query: 19 ttcacaatttaagtcagtgtggcatttcccacattcatattga 61
|||||||| ||||||| | | ||||||||||||||||||||||
Sbjct: 124 ttcacaatataagtcattctagcatttcccacattcatattga 82
>RF00906;MIR1122;AAAA02004833.1/5259-5122 39946:Oryza sativa Indica
Group
Length = 138
Score = 65.9 bits (33), Expect = 2e-10
Identities = 60/69 (86%)
Strand = Plus / Plus
Query: 92 tagattcattaacatcaatatgaatgtggagaatgctgaaatgacttacattgtgaaatg 151
|||||| ||||||||| |||||||||||| |||||| || | |||||||||||||| |
Sbjct: 66 tagatttattaacatctatatgaatgtgggcaatgctagaaagtcttacattgtgaaacg 125
Query: 152 gaggaagta 160
|||||||||
Sbjct: 126 gaggaagta 134
Score = 46.1 bits (23), Expect = 2e-04
Identities = 38/43 (88%)
Strand = Plus / Minus
Query: 40 gcatttcccacattcatattgaagttaatgaatgtagacatat 82
||||| ||||||||||||| || |||||| ||| |||||||||
Sbjct: 101 gcattgcccacattcatatagatgttaataaatctagacatat 59
>RF00906;MIR1122;AAAA02032505.1/38201-38060 39946:Oryza sativa
Indica Group
Length = 142
Score = 63.9 bits (32), Expect = 6e-10
Identities = 56/64 (87%)
Strand = Plus / Plus
Query: 92 tagattcattaacatcaatatgaatgtggagaatgctgaaatgacttacattgtgaaatg 151
|||||||||| |||| |||||||||||| |||||| ||||||||||||||||||| |
Sbjct: 70 tagattcattgacataaatatgaatgtgagaaatgctagaatgacttacattgtgaaacg 129
Query: 152 gagg 155
||||
Sbjct: 130 gagg 133
Score = 60.0 bits (30), Expect = 1e-08
Identities = 63/74 (85%)
Strand = Plus / Minus
Query: 10 tccctccagttcacaatttaagtcagtgtggcatttcccacattcatattgaagttaatg 69
||||||| |||||||| ||||||| | | ||||||| |||||||||||| | || ||||
Sbjct: 135 tccctccgtttcacaatgtaagtcattctagcatttctcacattcatatttatgtcaatg 76
Query: 70 aatgtagacatata 83
||| ||||||||||
Sbjct: 75 aatctagacatata 62
Score = 58.0 bits (29), Expect = 4e-08
Identities = 47/53 (88%)
Strand = Plus / Minus
Query: 103 acatcaatatgaatgtggagaatgctgaaatgacttacattgtgaaatggagg 155
||||||||||||||||| |||||| ||||||||||||||||||| |||||
Sbjct: 62 acatcaatatgaatgtgagaaatgctagaatgacttacattgtgaaacggagg 10
Score = 48.1 bits (24), Expect = 4e-05
Identities = 45/52 (86%)
Strand = Plus / Plus
Query: 10 tccctccagttcacaatttaagtcagtgtggcatttcccacattcatattga 61
||||||| |||||||| ||||||| | | ||||||| ||||||||||||||
Sbjct: 8 tccctccgtttcacaatgtaagtcattctagcatttctcacattcatattga 59
>RF00906;MIR1122;AAAA02000417.1/68495-68635 39946:Oryza sativa
Indica Group
Length = 141
Score = 63.9 bits (32), Expect = 6e-10
Identities = 50/56 (89%)
Strand = Plus / Plus
Query: 105 atcaatatgaatgtggagaatgctgaaatgacttacattgtgaaatggaggaagta 160
|||||||||||| ||| |||||| ||||||||||||||||||| ||||||||||
Sbjct: 82 atcaatatgaatatgggaaatgctagaatgacttacattgtgaaacggaggaagta 137
Score = 61.9 bits (31), Expect = 3e-09
Identities = 68/79 (86%), Gaps = 1/79 (1%)
Strand = Plus / Minus
Query: 83 atatgtatgtagattcattaacatcaatatgaatgtggagaatgct-gaaatgacttaca 141
|||| ||| ||||||||||||||||||||||||||||| |||| | || ||||||||
Sbjct: 83 atatctatctagattcattaacatcaatatgaatgtgggaaatgttagaggggacttaca 24
Query: 142 ttgtgaaatggaggaagta 160
|||||||| ||||| ||||
Sbjct: 23 ttgtgaaacggagggagta 5
Score = 58.0 bits (29), Expect = 4e-08
Identities = 35/37 (94%)
Strand = Plus / Plus
Query: 41 catttcccacattcatattgaagttaatgaatgtaga 77
||||||||||||||||||||| |||||||||| ||||
Sbjct: 40 catttcccacattcatattgatgttaatgaatctaga 76
Score = 46.1 bits (23), Expect = 2e-04
Identities = 38/43 (88%)
Strand = Plus / Minus
Query: 19 ttcacaatttaagtcagtgtggcatttcccacattcatattga 61
|||||||| ||||||| | | |||||||||| |||||||||||
Sbjct: 125 ttcacaatgtaagtcattctagcatttcccatattcatattga 83
>RF00906;MIR1122;AL662959.3/120503-120618 39947:Oryza sativa
Japonica Group
Length = 116
Score = 63.9 bits (32), Expect = 6e-10
Identities = 44/48 (91%)
Strand = Plus / Minus
Query: 41 catttcccacattcatattgaagttaatgaatgtagacatatatatgt 88
||||||||||||||||||||| | |||| ||| |||||||||||||||
Sbjct: 112 catttcccacattcatattgatgctaataaatctagacatatatatgt 65
Score = 61.9 bits (31), Expect = 3e-09
Identities = 43/47 (91%)
Strand = Plus / Plus
Query: 41 catttcccacattcatattgaagttaatgaatgtagacatatatatg 87
||||||||||||||||||||| | ||||||| ||||||||||||||
Sbjct: 5 catttcccacattcatattgatgctaatgaaactagacatatatatg 51
Score = 48.1 bits (24), Expect = 4e-05
Identities = 42/47 (89%), Gaps = 2/47 (4%)
Strand = Plus / Plus
Query: 74 tagacatatatatgtatgtagattcattaacatcaatatgaatgtgg 120
||||||||||||||| | ||||| |||| |||||||||||||||||
Sbjct: 62 tagacatatatatgtct--agatttattagcatcaatatgaatgtgg 106
>RF00906;MIR1122;AAAA02004941.1/49677-49840 39946:Oryza sativa
Indica Group
Length = 164
Score = 63.9 bits (32), Expect = 6e-10
Identities = 101/123 (82%), Gaps = 2/123 (1%)
Strand = Plus / Plus
Query: 40 gcatttcccacattcatattgaagttaatgaatgtagacatatatatgtatgtagattca 99
||||| ||||||||||| | || |||||||||| || |||||| ||||| | ||||||||
Sbjct: 38 gcattacccacattcatttagatgttaatgaatctaaacatatgtatgtgtttagattca 97
Query: 100 ttaacatcaatat--gaatgtggagaatgctgaaatgacttacattgtgaaatggaggaa 157
||||||| |||| | ||||| |||||| ||| | |||||||||||||| ||||| |
Sbjct: 98 ttaacatatatatatgtatgtgagcaatgctaaaaagtcttacattgtgaaacggaggga 157
Query: 158 gta 160
|||
Sbjct: 158 gta 160
Score = 54.0 bits (27), Expect = 6e-07
Identities = 72/87 (82%)
Strand = Plus / Minus
Query: 63 gttaatgaatgtagacatatatatgtatgtagattcattaacatcaatatgaatgtggag 122
|||||||||| || ||| ||| || | | |||||||||||||||| | ||||||||||
Sbjct: 102 gttaatgaatctaaacacatacatatgtttagattcattaacatctaaatgaatgtgggt 43
Query: 123 aatgctgaaatgacttacattgtgaaa 149
|||||| || | ||||||||||||||
Sbjct: 42 aatgctagaaagtcttacattgtgaaa 16
>RF00906;MIR1122;AAAA02025148.1/1003-861 39946:Oryza sativa Indica
Group
Length = 143
Score = 63.9 bits (32), Expect = 6e-10
Identities = 47/52 (90%)
Strand = Plus / Minus
Query: 110 tatgaatgtggagaatgctgaaatgacttacattgtgaaatggaggaagtat 161
|||||||||||| ||| || ||||||||||||||||||| |||||||||||
Sbjct: 55 tatgaatgtggaaaatactagaatgacttacattgtgaaacggaggaagtat 4
>RF00906;MIR1122;AP004774.3/34374-34243 39947:Oryza sativa Japonica
Group
Length = 132
Score = 63.9 bits (32), Expect = 6e-10
Identities = 71/84 (84%)
Strand = Plus / Minus
Query: 77 acatatatatgtatgtagattcattaacatcaatatgaatgtggagaatgctgaaatgac 136
|||||||||| ||| ||||||||||| ||||||||| ||| || ||| || ||||||
Sbjct: 88 acatatatatctatctagattcattatcatcaatataaatatgagaaatactagaatgac 29
Query: 137 ttacattgtgaaatggaggaagta 160
||| ||||||||| ||||||||||
Sbjct: 28 ttatattgtgaaacggaggaagta 5
>RF00906;MIR1122;AACV01014389.1/11060-11177 39947:Oryza sativa
Japonica Group
Length = 118
Score = 63.9 bits (32), Expect = 6e-10
Identities = 47/52 (90%)
Strand = Plus / Plus
Query: 95 attcattaacatcaatatgaatgtggagaatgctgaaatgacttacattgtg 146
|||||||| ||||||||||||||||| |||||| ||||||||| |||||||
Sbjct: 49 attcattagcatcaatatgaatgtgggaaatgctaaaatgacttgcattgtg 100
Score = 54.0 bits (27), Expect = 6e-07
Identities = 33/35 (94%)
Strand = Plus / Minus
Query: 40 gcatttcccacattcatattgaagttaatgaatgt 74
|||||||||||||||||||||| | ||||||||||
Sbjct: 81 gcatttcccacattcatattgatgctaatgaatgt 47
>RF00906;MIR1122;AP004159.3/17803-17642 39947:Oryza sativa Japonica
Group
Length = 162
Score = 61.9 bits (31), Expect = 3e-09
Identities = 94/115 (81%)
Strand = Plus / Plus
Query: 46 cccacattcatattgaagttaatgaatgtagacatatatatgtatgtagattcattaaca 105
|||| |||||||| || |||||||||| |||||| |||| | | ||||||||||||||
Sbjct: 44 cccatattcatatagatgttaatgaatttagacacgcatatatgtctagattcattaaca 103
Query: 106 tcaatatgaatgtggagaatgctgaaatgacttacattgtgaaatggaggaagta 160
|| |||||||| ||| ||| || || | |||||||||||||| ||||| ||||
Sbjct: 104 tctatatgaatatgggcaatactagaaagtcttacattgtgaaacggagggagta 158
Score = 61.9 bits (31), Expect = 3e-09
Identities = 61/71 (85%)
Strand = Plus / Minus
Query: 46 cccacattcatattgaagttaatgaatgtagacatatatatgtatgtagattcattaaca 105
|||| |||||||| || |||||||||| ||||||||||| || | || |||||||||||
Sbjct: 119 cccatattcatatagatgttaatgaatctagacatatatgcgtgtctaaattcattaaca 60
Query: 106 tcaatatgaat 116
|| ||||||||
Sbjct: 59 tctatatgaat 49
>RF00906;MIR1122;AACV01008500.1/10563-10402 39947:Oryza sativa
Japonica Group
Length = 162
Score = 61.9 bits (31), Expect = 3e-09
Identities = 115/143 (80%)
Strand = Plus / Minus
Query: 19 ttcacaatttaagtcagtgtggcatttcccacattcatattgaagttaatgaatgtagac 78
|||| ||| ||||||| ||| |||||| |||||||| | || |||| ||||| |||||
Sbjct: 146 ttcataatgtaagtcattgtagcatttttcacattcacttggatgttagtgaatctagac 87
Query: 79 atatatatgtatgtagattcattaacatcaatatgaatgtggagaatgctgaaatgactt 138
||||||| || |||||||| ||||||| |||| ||| || |||||| ||||||||
Sbjct: 86 atatatacatacttagattcactaacatctatatcaatatgagaaatgctagaatgactt 27
Query: 139 acattgtgaaatggaggaagtat 161
||||| ||||| ||||| |||||
Sbjct: 26 acattatgaaacggagggagtat 4
Score = 46.1 bits (23), Expect = 2e-04
Identities = 113/143 (79%)
Strand = Plus / Plus
Query: 7 tactccctccagttcacaatttaagtcagtgtggcatttcccacattcatattgaagtta 66
|||||||||| |||| ||| ||||||| | | ||||||| || ||| |||| || ||||
Sbjct: 5 tactccctccgtttcataatgtaagtcattctagcatttctcatattgatatagatgtta 64
Query: 67 atgaatgtagacatatatatgtatgtagattcattaacatcaatatgaatgtggagaatg 126
||||| || || ||||| | | |||||||| ||||||| | |||||||| | ||||
Sbjct: 65 gtgaatctaagtatgtatatatgtctagattcactaacatccaagtgaatgtgaaaaatg 124
Query: 127 ctgaaatgacttacattgtgaaa 149
|| ||||||||||||| |||||
Sbjct: 125 ctacaatgacttacattatgaaa 147
>RF00906;MIR1122;AACV01005561.1/19179-19268 39947:Oryza sativa
Japonica Group
Length = 90
Score = 61.9 bits (31), Expect = 3e-09
Identities = 68/80 (85%), Gaps = 4/80 (5%)
Strand = Plus / Plus
Query: 41 catttcccacattcatattgaagttaatgaatgtagacatatatatgtatgtagattcat 100
|||| ||||||||||||| | |||||||||| |||||||||| ||| |||||||||
Sbjct: 5 cattgcccacattcatatatatgttaatgaatctagacatata----tatctagattcat 60
Query: 101 taacatcaatatgaatgtgg 120
|||||| ||||||||||||
Sbjct: 61 taacatatatatgaatgtgg 80
Score = 54.0 bits (27), Expect = 6e-07
Identities = 69/81 (85%), Gaps = 4/81 (4%)
Strand = Plus / Minus
Query: 40 gcatttcccacattcatattgaagttaatgaatgtagacatatatatgtatgtagattca 99
||||| ||||||||||||| | |||||||||| |||| ||||||||| | |||||||
Sbjct: 87 gcattgcccacattcatatatatgttaatgaatctaga--tatatatgtct--agattca 32
Query: 100 ttaacatcaatatgaatgtgg 120
||||||| ||||||||||||
Sbjct: 31 ttaacatatatatgaatgtgg 11
>RF00906;MIR1122;AAAA02024471.1/543-453 39946:Oryza sativa Indica
Group
Length = 91
Score = 61.9 bits (31), Expect = 3e-09
Identities = 69/81 (85%), Gaps = 3/81 (3%)
Strand = Plus / Plus
Query: 40 gcatttcccacattcatattgaagttaatgaatgtagacatatatatgtatgtagattca 99
||||||||||| |||||||||| ||||||||| |||| | ||||| || ||||||||
Sbjct: 4 gcatttcccacgttcatattgatattaatgaatctagatagatata---atctagattca 60
Query: 100 ttaacatcaatatgaatgtgg 120
|||| ||||||||||| ||||
Sbjct: 61 ttaatatcaatatgaacgtgg 81
Score = 61.9 bits (31), Expect = 3e-09
Identities = 69/81 (85%), Gaps = 3/81 (3%)
Strand = Plus / Minus
Query: 40 gcatttcccacattcatattgaagttaatgaatgtagacatatatatgtatgtagattca 99
||||||||||| |||||||||| ||||||||| |||| ||||| ||| ||||||||
Sbjct: 88 gcatttcccacgttcatattgatattaatgaatctagat---tatatctatctagattca 32
Query: 100 ttaacatcaatatgaatgtgg 120
|||| ||||||||||| ||||
Sbjct: 31 ttaatatcaatatgaacgtgg 11
>RF00906;MIR1122;AAAA02003905.1/23139-23041 39946:Oryza sativa
Indica Group
Length = 99
Score = 61.9 bits (31), Expect = 3e-09
Identities = 46/51 (90%)
Strand = Plus / Plus
Query: 110 tatgaatgtggagaatgctgaaatgacttacattgtgaaatggaggaagta 160
||||||||||| |||||| ||||||||||||||||||| ||||||||||
Sbjct: 45 tatgaatgtgggaaatgctagaatgacttacattgtgaaacggaggaagta 95
Score = 46.1 bits (23), Expect = 2e-04
Identities = 35/39 (89%)
Strand = Plus / Minus
Query: 19 ttcacaatttaagtcagtgtggcatttcccacattcata 57
|||||||| ||||||| | | ||||||||||||||||||
Sbjct: 83 ttcacaatgtaagtcattctagcatttcccacattcata 45
>RF00906;MIR1122;AACV01001224.1/5364-5468 39947:Oryza sativa
Japonica Group
Length = 105
Score = 61.9 bits (31), Expect = 3e-09
Identities = 55/63 (87%)
Strand = Plus / Minus
Query: 98 cattaacatcaatatgaatgtggagaatgctgaaatgacttacattgtgaaatggaggaa 157
||||||||| ||||| |||||| |||||| ||||||||||||||||||| |||||||
Sbjct: 67 cattaacattaatataaatgtgagaaatgctagaatgacttacattgtgaaacggaggaa 8
Query: 158 gta 160
|||
Sbjct: 7 gta 5
>RF00906;MIR1122;AACV01011062.1/4765-4926 39947:Oryza sativa
Japonica Group
Length = 162
Score = 61.9 bits (31), Expect = 3e-09
Identities = 124/155 (80%)
Strand = Plus / Minus
Query: 6 gtactccctccagttcacaatttaagtcagtgtggcatttcccacattcatattgaagtt 65
||||||||||| |||||||| |||| | | | ||||| ||||||| ||| | || |||
Sbjct: 159 gtactccctccgtttcacaatgtaagactttctagcattgcccacatacatttagatgtt 100
Query: 66 aatgaatgtagacatatatatgtatgtagattcattaacatcaatatgaatgtggagaat 125
||| ||| |||||||||| || | | |||||||||||||||| | ||||||| | |||
Sbjct: 99 aataaatctagacatatacatatgtttagattcattaacatctaaatgaatggaggtaat 40
Query: 126 gctgaaatgacttacattgtgaaatggaggaagta 160
|| || | |||||||||||||| ||||||||||
Sbjct: 39 actataaagtcttacattgtgaaacggaggaagta 5
Score = 54.0 bits (27), Expect = 6e-07
Identities = 90/111 (81%)
Strand = Plus / Plus
Query: 50 cattcatattgaagttaatgaatgtagacatatatatgtatgtagattcattaacatcaa 109
||||||| | || |||||||||| || |||||| ||| | | |||||| ||||||||| |
Sbjct: 48 cattcatttagatgttaatgaatctaaacatatgtatatgtctagatttattaacatcta 107
Query: 110 tatgaatgtggagaatgctgaaatgacttacattgtgaaatggaggaagta 160
||| |||||| |||||| || | |||||||||||||| ||||| ||||
Sbjct: 108 aatgtatgtgggcaatgctagaaagtcttacattgtgaaacggagggagta 158
>RF00906;MIR1122;AACV01021025.1/26769-26650 39947:Oryza sativa
Japonica Group
Length = 120
Score = 61.9 bits (31), Expect = 3e-09
Identities = 49/55 (89%)
Strand = Plus / Plus
Query: 7 tactccctccagttcacaatttaagtcagtgtggcatttcccacattcatattga 61
|||||||||| |||||||| ||||||| | | ||||||||||||||||||||||
Sbjct: 5 tactccctccgtttcacaatataagtcattctagcatttcccacattcatattga 59
Score = 58.0 bits (29), Expect = 4e-08
Identities = 50/57 (87%)
Strand = Plus / Minus
Query: 105 atcaatatgaatgtggagaatgctgaaatgacttacattgtgaaatggaggaagtat 161
|||||||||||||||| |||||| ||||||||| ||||||||| ||||| |||||
Sbjct: 60 atcaatatgaatgtgggaaatgctagaatgacttatattgtgaaacggagggagtat 4
Score = 56.0 bits (28), Expect = 2e-07
Identities = 40/44 (90%)
Strand = Plus / Minus
Query: 19 ttcacaatttaagtcagtgtggcatttcccacattcatattgaa 62
|||||||| ||||||| | | |||||||||||||||||||||||
Sbjct: 103 ttcacaatataagtcattctagcatttcccacattcatattgaa 60
Score = 48.1 bits (24), Expect = 4e-05
Identities = 39/44 (88%)
Strand = Plus / Plus
Query: 106 tcaatatgaatgtggagaatgctgaaatgacttacattgtgaaa 149
||||||||||||||| |||||| ||||||||| |||||||||
Sbjct: 61 tcaatatgaatgtgggaaatgctagaatgacttatattgtgaaa 104
>RF00906;MIR1122;AP008216.1/5745760-5745877 39947:Oryza sativa
Japonica Group
Length = 118
Score = 61.9 bits (31), Expect = 3e-09
Identities = 49/55 (89%)
Strand = Plus / Plus
Query: 106 tcaatatgaatgtggagaatgctgaaatgacttacattgtgaaatggaggaagta 160
||||||||||||||| |||||| ||||||||| ||||||||| ||||||||||
Sbjct: 60 tcaatatgaatgtgggaaatgctagaatgacttatattgtgaaacggaggaagta 114
Score = 58.0 bits (29), Expect = 4e-08
Identities = 51/57 (89%), Gaps = 1/57 (1%)
Strand = Plus / Minus
Query: 105 atcaatatgaatgtggagaatgctgaaatgacttacattgtgaaatggaggaagtat 161
||||||||||||||||| |||||| ||||||||| ||||||||| ||||| |||||
Sbjct: 59 atcaatatgaatgtgga-aatgctagaatgacttatattgtgaaacggagggagtat 4
Score = 56.0 bits (28), Expect = 2e-07
Identities = 40/44 (90%)
Strand = Plus / Minus
Query: 19 ttcacaatttaagtcagtgtggcatttcccacattcatattgaa 62
|||||||| ||||||| | | |||||||||||||||||||||||
Sbjct: 102 ttcacaatataagtcattctagcatttcccacattcatattgaa 59
Score = 46.1 bits (23), Expect = 2e-04
Identities = 48/55 (87%), Gaps = 1/55 (1%)
Strand = Plus / Plus
Query: 7 tactccctccagttcacaatttaagtcagtgtggcatttcccacattcatattga 61
|||||||||| |||||||| ||||||| | | |||||||| |||||||||||||
Sbjct: 5 tactccctccgtttcacaatataagtcattctagcatttcc-acattcatattga 58
>RF00906;MIR1122;AACV01006750.1/48875-49000 39947:Oryza sativa
Japonica Group
Length = 126
Score = 60.0 bits (30), Expect = 1e-08
Identities = 54/62 (87%)
Strand = Plus / Plus
Query: 100 ttaacatcaatatgaatgtggagaatgctgaaatgacttacattgtgaaatggaggaagt 159
||||||||||||| ||| || |||||| |||||||||| ||||||||| |||||||||
Sbjct: 62 ttaacatcaatataaatatgagaaatgctaaaatgacttatattgtgaaacggaggaagt 121
Query: 160 at 161
||
Sbjct: 122 at 123
Score = 58.0 bits (29), Expect = 4e-08
Identities = 53/61 (86%)
Strand = Plus / Minus
Query: 100 ttaacatcaatatgaatgtggagaatgctgaaatgacttacattgtgaaatggaggaagt 159
||||||||||||| ||| || |||||| |||||||||||||||||||| ||||| |||
Sbjct: 65 ttaacatcaatataaatatgagaaatgctaaaatgacttacattgtgaaacggagggagt 6
Query: 160 a 160
|
Sbjct: 5 a 5
Score = 46.1 bits (23), Expect = 2e-04
Identities = 53/63 (84%)
Strand = Plus / Plus
Query: 5 tgtactccctccagttcacaatttaagtcagtgtggcatttcccacattcatattgaagt 64
|||||||||||| |||||||| ||||||| | | ||||||| || ||| ||||||| ||
Sbjct: 3 tgtactccctccgtttcacaatgtaagtcattttagcatttctcatatttatattgatgt 62
Query: 65 taa 67
|||
Sbjct: 63 taa 65
>RF00906;MIR1122;AAAA02029423.1/117947-118080 39946:Oryza sativa
Indica Group
Length = 134
Score = 60.0 bits (30), Expect = 1e-08
Identities = 60/70 (85%)
Strand = Plus / Minus
Query: 92 tagattcattaacatcaatatgaatgtggagaatgctgaaatgacttacattgtgaaatg 151
||||||||||||||| ||| | ||| || | |||||| |||||||||| ||||||||| |
Sbjct: 73 tagattcattaacattaatgtaaatatgaaaaatgctaaaatgacttatattgtgaaacg 14
Query: 152 gaggaagtat 161
|| |||||||
Sbjct: 13 gaagaagtat 4
Score = 46.1 bits (23), Expect = 2e-04
Identities = 41/47 (87%)
Strand = Plus / Plus
Query: 109 atatgaatgtggagaatgctgaaatgacttacattgtgaaatggagg 155
||||||||||| | |||| | |||||||||| ||||||||| |||||
Sbjct: 79 atatgaatgtgaaaaatgttaaaatgacttatattgtgaaacggagg 125
>RF00906;MIR1122;AACV01024080.1/281-400 39947:Oryza sativa Japonica
Group
Length = 120
Score = 60.0 bits (30), Expect = 1e-08
Identities = 51/58 (87%)
Strand = Plus / Minus
Query: 103 acatcaatatgaatgtggagaatgctgaaatgacttacattgtgaaatggaggaagta 160
||||||||||||||||| | ||| || ||||||||||||||||||| ||||| ||||
Sbjct: 62 acatcaatatgaatgtgaaaaatactataatgacttacattgtgaaacggagggagta 5
Score = 54.0 bits (27), Expect = 6e-07
Identities = 48/55 (87%)
Strand = Plus / Plus
Query: 106 tcaatatgaatgtggagaatgctgaaatgacttacattgtgaaatggaggaagta 160
|||||||||||||| | ||| || ||||||||||||| ||||||||||| ||||
Sbjct: 62 tcaatatgaatgtgaaaaatactagaatgacttacattatgaaatggagggagta 116
>RF00906;MIR1122;AY946768.1/117-30 4530:Oryza sativa (rice)
Length = 88
Score = 60.0 bits (30), Expect = 1e-08
Identities = 68/81 (83%), Gaps = 6/81 (7%)
Strand = Plus / Minus
Query: 40 gcatttcccacattcatattgaagttaatgaatgtagacatatatatgtatgtagattca 99
|||||||||||||||||||||| || ||||||| |||||| | | | ||||||||
Sbjct: 85 gcatttcccacattcatattgatgtcaatgaatctagacaga------tgtctagattca 32
Query: 100 ttaacatcaatatgaatgtgg 120
|| ||||||||||||||||||
Sbjct: 31 ttgacatcaatatgaatgtgg 11
Score = 58.0 bits (29), Expect = 4e-08
Identities = 67/80 (83%), Gaps = 6/80 (7%)
Strand = Plus / Plus
Query: 41 catttcccacattcatattgaagttaatgaatgtagacatatatatgtatgtagattcat 100
||||||||||||||||||||| || ||||||| ||||| || | | |||||||||
Sbjct: 5 catttcccacattcatattgatgtcaatgaatctagac------atctgtctagattcat 58
Query: 101 taacatcaatatgaatgtgg 120
| ||||||||||||||||||
Sbjct: 59 tgacatcaatatgaatgtgg 78
>RF00906;MIR1122;AP008213.1/22940331-22940471 39947:Oryza sativa
Japonica Group
Length = 141
Score = 60.0 bits (30), Expect = 1e-08
Identities = 57/66 (86%)
Strand = Plus / Plus
Query: 95 attcattaacatcaatatgaatgtggagaatgctgaaatgacttacattgtgaaatggag 154
||||||||||||| ||||| || || |||||| ||||| |||||||||||||| ||||
Sbjct: 72 attcattaacatctatatgtatatgagcaatgctaaaatgtcttacattgtgaaacggag 131
Query: 155 gaagta 160
||||||
Sbjct: 132 gaagta 137
>RF00906;MIR1122;AP008213.1/18080772-18080661 39947:Oryza sativa
Japonica Group
Length = 112
Score = 60.0 bits (30), Expect = 1e-08
Identities = 42/46 (91%)
Strand = Plus / Plus
Query: 116 tgtggagaatgctgaaatgacttacattgtgaaatggaggaagtat 161
|||||| |||||| ||||||||||||||||||| |||||||||||
Sbjct: 64 tgtggaaaatgctagaatgacttacattgtgaaacggaggaagtat 109
Score = 52.0 bits (26), Expect = 2e-06
Identities = 35/38 (92%)
Strand = Plus / Minus
Query: 123 aatgctgaaatgacttacattgtgaaatggaggaagta 160
|||||| |||||||||||||||||||| ||||| ||||
Sbjct: 42 aatgctaaaatgacttacattgtgaaacggagggagta 5
Score = 48.1 bits (24), Expect = 4e-05
Identities = 45/52 (86%)
Strand = Plus / Plus
Query: 5 tgtactccctccagttcacaatttaagtcagtgtggcatttcccacattcat 56
|||||||||||| |||||||| ||||||| | | ||||||||| |||||||
Sbjct: 3 tgtactccctccgtttcacaatgtaagtcattttagcatttcccgcattcat 54
>RF00906;MIR1122;AAAA02036283.1/12137-12272 39946:Oryza sativa
Indica Group
Length = 136
Score = 60.0 bits (30), Expect = 1e-08
Identities = 54/62 (87%)
Strand = Plus / Minus
Query: 103 acatcaatatgaatgtggagaatgctgaaatgacttacattgtgaaatggaggaagtatg 162
||||| ||||||||||||| |||||| || | |||||||| ||||| ||||||||||||
Sbjct: 62 acatctatatgaatgtggacaatgctagaaagtcttacattatgaaaaggaggaagtatg 3
Query: 163 ta 164
||
Sbjct: 2 ta 1
Score = 60.0 bits (30), Expect = 1e-08
Identities = 51/58 (87%)
Strand = Plus / Plus
Query: 92 tagattcattaacatcaatatgaatgtggagaatgctgaaatgacttacattgtgaaa 149
|||||||||||||||| ||||||||||||| |||||| || | |||||||| |||||
Sbjct: 64 tagattcattaacatctatatgaatgtggacaatgctagaaagtcttacattatgaaa 121
Score = 52.0 bits (26), Expect = 2e-06
Identities = 41/46 (89%)
Strand = Plus / Minus
Query: 47 ccacattcatattgaagttaatgaatgtagacatatatatgtatgt 92
|||||||||||| || |||||||||| ||||||| |||||| ||||
Sbjct: 92 ccacattcatatagatgttaatgaatctagacatctatatgaatgt 47
>RF00906;MIR1122;AL606694.3/113643-113765 39947:Oryza sativa
Japonica Group
Length = 123
Score = 60.0 bits (30), Expect = 1e-08
Identities = 51/58 (87%)
Strand = Plus / Plus
Query: 81 atatatgtatgtagattcattaacatcaatatgaatgtggagaatgctgaaatgactt 138
|||||| ||| ||||| ||||||||||||||||||||||| |||||| ||||||||
Sbjct: 66 atatatctatctagatacattaacatcaatatgaatgtgggaaatgctagaatgactt 123
Score = 54.0 bits (27), Expect = 6e-07
Identities = 42/47 (89%)
Strand = Plus / Minus
Query: 92 tagattcattaacatcaatatgaatgtggagaatgctgaaatgactt 138
||||| ||||||||||||||||||||||| |||||| ||||||||
Sbjct: 47 tagatacattaacatcaatatgaatgtgggaaatgctagaatgactt 1
Score = 54.0 bits (27), Expect = 6e-07
Identities = 42/47 (89%)
Strand = Plus / Minus
Query: 40 gcatttcccacattcatattgaagttaatgaatgtagacatatatat 86
|||||||||||||||||||||| ||||||| || |||| | ||||||
Sbjct: 112 gcatttcccacattcatattgatgttaatgtatctagatagatatat 66
Score = 52.0 bits (26), Expect = 2e-06
Identities = 29/30 (96%)
Strand = Plus / Plus
Query: 40 gcatttcccacattcatattgaagttaatg 69
|||||||||||||||||||||| |||||||
Sbjct: 12 gcatttcccacattcatattgatgttaatg 41
>RF00906;MIR1122;AACV01016615.1/81402-81262 39947:Oryza sativa
Japonica Group
Length = 141
Score = 60.0 bits (30), Expect = 1e-08
Identities = 57/66 (86%)
Strand = Plus / Minus
Query: 95 attcattaacatcaatatgaatgtggagaatgctgaaatgacttacattgtgaaatggag 154
||||||||||||| ||||| || || |||||| ||||| |||||||||||||| ||||
Sbjct: 70 attcattaacatctatatgtatatgagcaatgctaaaatgtcttacattgtgaaacggag 11
Query: 155 gaagta 160
||||||
Sbjct: 10 gaagta 5
>RF00906;MIR1122;AACV01003992.1/29908-29746 39947:Oryza sativa
Japonica Group
Length = 163
Score = 60.0 bits (30), Expect = 1e-08
Identities = 70/82 (85%), Gaps = 1/82 (1%)
Strand = Plus / Plus
Query: 40 gcatttcccacattcatattgaagttaa-tgaatgtagacatatatatgtatgtagattc 98
||||| ||||||||||||| || ||||| | ||| |||||| || || ||| |||||||
Sbjct: 38 gcattacccacattcatatagatgttaaattaatctagacacctacatatatctagattc 97
Query: 99 attaacatcaatatgaatgtgg 120
||||||||| ||||||||||||
Sbjct: 98 attaacatctatatgaatgtgg 119
Score = 60.0 bits (30), Expect = 1e-08
Identities = 70/82 (85%), Gaps = 1/82 (1%)
Strand = Plus / Minus
Query: 40 gcatttcccacattcatattgaagttaatgaatgtagacatatatatgtatgtagattca 99
||||| ||||||||||||| || |||||||||| |||| |||| || || | |||||| |
Sbjct: 126 gcattgcccacattcatatagatgttaatgaatctagatatatgtaggtgtctagattaa 67
Query: 100 -ttaacatcaatatgaatgtgg 120
|||||||| ||||||||||||
Sbjct: 66 tttaacatctatatgaatgtgg 45
>RF00906;MIR1122;AACV01014958.1/7523-7680 39947:Oryza sativa
Japonica Group
Length = 158
Score = 60.0 bits (30), Expect = 1e-08
Identities = 60/70 (85%)
Strand = Plus / Minus
Query: 92 tagattcattaacatcaatatgaatgtggagaatgctgaaatgacttacattgtgaaatg 151
|||||||||||||||| | |||||||||| || ||| || | |||||||||||||| |
Sbjct: 73 tagattcattaacatctaaatgaatgtgggcaacgctacaaagtcttacattgtgaaacg 14
Query: 152 gaggaagtat 161
||||||||||
Sbjct: 13 gaggaagtat 4
Score = 60.0 bits (30), Expect = 1e-08
Identities = 94/115 (81%), Gaps = 4/115 (3%)
Strand = Plus / Plus
Query: 46 cccacattcatattgaagttaatgaatgtagacatatatatgtatgtagattcattaaca 105
||||||||||| | || |||||||||| ||||||||| |||| ||||||||||||||
Sbjct: 44 cccacattcatttagatgttaatgaatctagacatat----gtatttagattcattaaca 99
Query: 106 tcaatatgaatgtggagaatgctgaaatgacttacattgtgaaatggaggaagta 160
|| |||| |||||| | |||| ||| | |||| ||||||||| ||||| ||||
Sbjct: 100 tctttatgtatgtgggtagtgctaaaaagtcttatattgtgaaacggagggagta 154
>RF00906;MIR1122;AACV01007157.1/75909-76016 39947:Oryza sativa
Japonica Group
Length = 108
Score = 58.0 bits (29), Expect = 4e-08
Identities = 41/45 (91%)
Strand = Plus / Minus
Query: 40 gcatttcccacattcatattgaagttaatgaatgtagacatatat 84
||||||| |||||||||||||| | |||||||| |||||||||||
Sbjct: 92 gcatttctcacattcatattgatgctaatgaatctagacatatat 48
Score = 50.1 bits (25), Expect = 1e-05
Identities = 43/49 (87%)
Strand = Plus / Minus
Query: 95 attcattaacatcaatatgaatgtggagaatgctgaaatgacttacatt 143
|||||||| |||||||||||||||| |||||| |||||||||||||
Sbjct: 49 attcattagcatcaatatgaatgtgagaaatgctagaatgacttacatt 1
Score = 48.1 bits (24), Expect = 4e-05
Identities = 27/28 (96%)
Strand = Plus / Plus
Query: 92 tagattcattaacatcaatatgaatgtg 119
||||||||||| ||||||||||||||||
Sbjct: 57 tagattcattagcatcaatatgaatgtg 84
>RF00906;MIR1122;AACV01016079.1/9825-9954 39947:Oryza sativa
Japonica Group
Length = 130
Score = 58.0 bits (29), Expect = 4e-08
Identities = 59/69 (85%)
Strand = Plus / Plus
Query: 92 tagattcattaacatcaatatgaatgtggagaatgctgaaatgacttacattgtgaaatg 151
|||||||||||| |||||||||||| || |||||| ||||||||||||| ||||| |
Sbjct: 58 tagattcattaatatcaatatgaatatgagaaatgctagaatgacttacattatgaaacg 117
Query: 152 gaggaagta 160
|||| ||||
Sbjct: 118 gagggagta 126
Score = 44.1 bits (22), Expect = 6e-04
Identities = 55/66 (83%)
Strand = Plus / Minus
Query: 7 tactccctccagttcacaatttaagtcagtgtggcatttcccacattcatattgaagtta 66
|||||||||| |||| ||| ||||||| | | ||||||| || ||||||||||| |||
Sbjct: 126 tactccctccgtttcataatgtaagtcattctagcatttctcatattcatattgatatta 67
Query: 67 atgaat 72
||||||
Sbjct: 66 atgaat 61
>RF00906;MIR1122;CR855182.1/16479-16369 4530:Oryza sativa (rice)
Length = 111
Score = 58.0 bits (29), Expect = 4e-08
Identities = 50/57 (87%)
Strand = Plus / Minus
Query: 104 catcaatatgaatgtggagaatgctgaaatgacttacattgtgaaatggaggaagta 160
|||||||||||| |||| |||||| ||||||||||||||||||| ||||| ||||
Sbjct: 61 catcaatatgaacgtgggaaatgctagaatgacttacattgtgaaacggagggagta 5
Score = 54.0 bits (27), Expect = 6e-07
Identities = 48/55 (87%)
Strand = Plus / Plus
Query: 7 tactccctccagttcacaatttaagtcagtgtggcatttcccacattcatattga 61
|||||||||| |||||||| ||||||| | | ||||||||||| ||||||||||
Sbjct: 5 tactccctccgtttcacaatgtaagtcattctagcatttcccacgttcatattga 59
>RF00906;MIR1122;AL662961.3/56991-57130 39947:Oryza sativa Japonica
Group
Length = 140
Score = 58.0 bits (29), Expect = 4e-08
Identities = 59/69 (85%)
Strand = Plus / Plus
Query: 92 tagattcattaacatcaatatgaatgtggagaatgctgaaatgacttacattgtgaaatg 151
||||||||||| ||||||||||||| ||| ||| || ||||||||||||| ||||| |
Sbjct: 68 tagattcattagcatcaatatgaatatgggaaatactagaatgacttacattatgaaacg 127
Query: 152 gaggaagta 160
|||| ||||
Sbjct: 128 gagggagta 136
Score = 48.1 bits (24), Expect = 4e-05
Identities = 60/72 (83%)
Strand = Plus / Minus
Query: 7 tactccctccagttcacaatttaagtcagtgtggcatttcccacattcatattgaagtta 66
|||||||||| |||| ||| ||||||| | | | |||||||| ||||||||||| | ||
Sbjct: 136 tactccctccgtttcataatgtaagtcattctagtatttcccatattcatattgatgcta 77
Query: 67 atgaatgtagac 78
|||||| |||||
Sbjct: 76 atgaatctagac 65
Score = 44.1 bits (22), Expect = 6e-04
Identities = 25/26 (96%)
Strand = Plus / Minus
Query: 135 acttacattgtgaaatggaggaagta 160
||||||||||||||| ||||||||||
Sbjct: 30 acttacattgtgaaacggaggaagta 5
>RF00906;MIR1122;AAAA02003671.1/11725-11603 39946:Oryza sativa
Indica Group
Length = 123
Score = 58.0 bits (29), Expect = 4e-08
Identities = 47/53 (88%)
Strand = Plus / Plus
Query: 108 aatatgaatgtggagaatgctgaaatgacttacattgtgaaatggaggaagta 160
||||||||||||| |||||| ||||||||| ||||||||| ||||||||||
Sbjct: 67 aatatgaatgtgggaaatgctagaatgacttatattgtgaaacggaggaagta 119
Score = 54.0 bits (27), Expect = 6e-07
Identities = 48/55 (87%)
Strand = Plus / Minus
Query: 5 tgtactccctccagttcacaatttaagtcagtgtggcatttcccacattcatatt 59
|||||| ||||| |||||||| ||||||| | | ||||||||||||||||||||
Sbjct: 121 tgtacttcctccgtttcacaatataagtcattctagcatttcccacattcatatt 67
Score = 46.1 bits (23), Expect = 2e-04
Identities = 38/43 (88%)
Strand = Plus / Plus
Query: 19 ttcacaatttaagtcagtgtggcatttcccacattcatattga 61
|||||||| ||||||| | | |||||||||| |||||||||||
Sbjct: 17 ttcacaatataagtcattctagcatttcccatattcatattga 59
Score = 44.1 bits (22), Expect = 6e-04
Identities = 40/46 (86%)
Strand = Plus / Minus
Query: 104 catcaatatgaatgtggagaatgctgaaatgacttacattgtgaaa 149
||||||||||||| ||| |||||| ||||||||| |||||||||
Sbjct: 61 catcaatatgaatatgggaaatgctagaatgacttatattgtgaaa 16
>RF00906;MIR1122;ABRL01002327.1/13187-13322 65489:Oryza barthii
Length = 136
Score = 58.0 bits (29), Expect = 4e-08
Identities = 47/53 (88%)
Strand = Plus / Minus
Query: 40 gcatttcccacattcatattgaagttaatgaatgtagacatatatatgtatgt 92
||||| ||||||||||||| | |||||||||| |||||||||||||| ||||
Sbjct: 99 gcattacccacattcatatatatgttaatgaatctagacatatatatgaatgt 47
>RF00906;MIR1122;AL663019.2/55100-55213 39947:Oryza sativa Japonica
Group
Length = 114
Score = 58.0 bits (29), Expect = 4e-08
Identities = 68/81 (83%)
Strand = Plus / Plus
Query: 40 gcatttcccacattcatattgaagttaatgaatgtagacatatatatgtatgtagattca 99
||||| |||| |||||||| | |||||||||| ||| |||| |||| | ||||||||
Sbjct: 14 gcattgcccatattcatatatatgttaatgaatctaggcatacatatatgcctagattca 73
Query: 100 ttaacatcaatatgaatgtgg 120
|||||||| ||||||||||||
Sbjct: 74 ttaacatctatatgaatgtgg 94
Score = 58.0 bits (29), Expect = 4e-08
Identities = 65/77 (84%)
Strand = Plus / Minus
Query: 40 gcatttcccacattcatattgaagttaatgaatgtagacatatatatgtatgtagattca 99
||||| ||||||||||||| || |||||||||| ||| ||||||| | | ||||||||
Sbjct: 101 gcattgcccacattcatatagatgttaatgaatctaggcatatatgtatgcctagattca 42
Query: 100 ttaacatcaatatgaat 116
||||||| ||||||||
Sbjct: 41 ttaacatatatatgaat 25
>RF00906;MIR1122;AAAA02022635.1/21983-21840 39946:Oryza sativa
Indica Group
Length = 144
Score = 58.0 bits (29), Expect = 4e-08
Identities = 59/69 (85%)
Strand = Plus / Plus
Query: 92 tagattcattaacatcaatatgaatgtggagaatgctgaaatgacttacattgtgaaatg 151
|||||||||||||||| |||||||||||| |||||| || | |||||||| ||||| |
Sbjct: 72 tagattcattaacatctatatgaatgtgggcaatgctagaaagtcttacattatgaaacg 131
Query: 152 gaggaagta 160
|||| ||||
Sbjct: 132 gagggagta 140
>RF00906;MIR1122;AAAA02005618.1/85725-85886 39946:Oryza sativa
Indica Group
Length = 162
Score = 56.0 bits (28), Expect = 2e-07
Identities = 79/96 (82%)
Strand = Plus / Plus
Query: 65 taatgaatgtagacatatatatgtatgtagattcattaacatcaatatgaatgtggagaa 124
|||||||| ||||||||||| ||| ||||||||||| ||| |||||||||||| ||
Sbjct: 63 taatgaatctagacatatatgtgtgcctagattcattagcatatatatgaatgtgggcaa 122
Query: 125 tgctgaaatgacttacattgtgaaatggaggaagta 160
|||| || | |||||||| ||||| ||||| ||||
Sbjct: 123 tgctagaaagtcttacattatgaaacggagggagta 158
>RF00906;MIR1122;AAAA02021983.1/2035-1916 39946:Oryza sativa Indica
Group
Length = 120
Score = 56.0 bits (28), Expect = 2e-07
Identities = 67/80 (83%)
Strand = Plus / Minus
Query: 41 catttcccacattcatattgaagttaatgaatgtagacatatatatgtatgtagattcat 100
|||| ||||||||||||| || | ||||||| ||||||||||| ||| |||||||||
Sbjct: 103 cattgcccacattcatatagatgcaaatgaatctagacatatatgtgtgcctagattcat 44
Query: 101 taacatcaatatgaatgtgg 120
|| ||| ||||||||||||
Sbjct: 43 tagcatagatatgaatgtgg 24
>RF00906;MIR1122;AAAA02027191.1/2112-2001 39946:Oryza sativa Indica
Group
Length = 112
Score = 56.0 bits (28), Expect = 2e-07
Identities = 55/64 (85%)
Strand = Plus / Plus
Query: 92 tagattcattaacatcaatatgaatgtggagaatgctgaaatgacttacattgtgaaatg 151
||||||| |||||||| ||||||||||||| |||||| || | |||||||| ||||| |
Sbjct: 40 tagattcgttaacatctatatgaatgtggacaatgctagaaagtcttacattatgaaacg 99
Query: 152 gagg 155
||||
Sbjct: 100 gagg 103
>RF00906;MIR1122;AL662994.3/155589-155501 39947:Oryza sativa
Japonica Group
Length = 89
Score = 56.0 bits (28), Expect = 2e-07
Identities = 43/48 (89%)
Strand = Plus / Minus
Query: 113 gaatgtggagaatgctgaaatgacttacattgtgaaatggaggaagta 160
||||||||| | |||| ||||||||||||||||||| ||||||||||
Sbjct: 52 gaatgtggaaagtgctagaatgacttacattgtgaaacggaggaagta 5
>RF00906;MIR1122;AAAA02036761.1/3716-3577 39946:Oryza sativa Indica
Group
Length = 140
Score = 56.0 bits (28), Expect = 2e-07
Identities = 46/52 (88%)
Strand = Plus / Plus
Query: 109 atatgaatgtggagaatgctgaaatgacttacattgtgaaatggaggaagta 160
|||||||||| || |||||| ||||||||||||| ||||| ||||||||||
Sbjct: 85 atatgaatgtagacaatgctagaatgacttacattatgaaacggaggaagta 136
>RF00906;MIR1122;AAAA02013760.1/16919-16808 39946:Oryza sativa
Indica Group
Length = 112
Score = 54.0 bits (27), Expect = 6e-07
Identities = 73/87 (83%), Gaps = 6/87 (6%)
Strand = Plus / Plus
Query: 40 gcatttcccacattcatattgaagttaatgaatgtagacatat----at--atgtatgta 93
||||| ||||||||||||| || |||||||||| |||| |||| || |||| | ||
Sbjct: 10 gcattgcccacattcatatggatgttaatgaatctagatatatggatattaatgtgtcta 69
Query: 94 gattcattaacatcaatatgaatgtgg 120
|||||||||||||| ||||||||||||
Sbjct: 70 gattcattaacatccatatgaatgtgg 96
Score = 54.0 bits (27), Expect = 6e-07
Identities = 71/86 (82%), Gaps = 6/86 (6%)
Strand = Plus / Minus
Query: 41 catttcccacattcatattgaagttaatgaatgtagaca------tatatatgtatgtag 94
|||| ||||||||||||| || |||||||||| |||||| ||| || ||| |||
Sbjct: 102 cattgcccacattcatatggatgttaatgaatctagacacattaatatccatatatctag 43
Query: 95 attcattaacatcaatatgaatgtgg 120
||||||||||||| ||||||||||||
Sbjct: 42 attcattaacatccatatgaatgtgg 17
>RF00906;MIR1122;AACV01006898.1/39166-39311 39947:Oryza sativa
Japonica Group
Length = 146
Score = 54.0 bits (27), Expect = 6e-07
Identities = 57/67 (85%)
Strand = Plus / Plus
Query: 95 attcattaacatcaatatgaatgtggagaatgctgaaatgacttacattgtgaaatggag 154
||||||||||||| |||||||||||| |||||| ||| | ||||||| ||||| ||||
Sbjct: 77 attcattaacatctatatgaatgtgggcaatgctaaaaagttttacattatgaaacggag 136
Query: 155 gaagtat 161
| |||||
Sbjct: 137 ggagtat 143
Score = 48.1 bits (24), Expect = 4e-05
Identities = 36/40 (90%)
Strand = Plus / Minus
Query: 40 gcatttcccacattcatattgaagttaatgaatgtagaca 79
||||| ||||||||||||| || |||||||||| ||||||
Sbjct: 109 gcattgcccacattcatatagatgttaatgaatttagaca 70
>RF00906;MIR1122;AAAA02029293.1/9001-8890 39946:Oryza sativa Indica
Group
Length = 112
Score = 54.0 bits (27), Expect = 6e-07
Identities = 54/63 (85%)
Strand = Plus / Plus
Query: 99 attaacatcaatatgaatgtggagaatgctgaaatgacttacattgtgaaatggaggaag 158
||||| |||||||| |||||| | ||| || |||||||| |||||||||| ||||||||
Sbjct: 47 attaatatcaatataaatgtgaaaaatactagaatgacttgcattgtgaaacggaggaag 106
Query: 159 tat 161
|||
Sbjct: 107 tat 109
Score = 44.1 bits (22), Expect = 6e-04
Identities = 28/30 (93%)
Strand = Plus / Minus
Query: 131 aatgacttacattgtgaaatggaggaagta 160
||||||||||||||||||| ||||| ||||
Sbjct: 34 aatgacttacattgtgaaacggagggagta 5
>RF00906;MIR1122;AAAA02018733.1/10980-10861 39946:Oryza sativa
Indica Group
Length = 120
Score = 54.0 bits (27), Expect = 6e-07
Identities = 42/47 (89%)
Strand = Plus / Plus
Query: 114 aatgtggagaatgctgaaatgacttacattgtgaaatggaggaagta 160
|||||||| |||||| ||||||||||||||||||| ||||| ||||
Sbjct: 70 aatgtggaaaatgctagaatgacttacattgtgaaacggagggagta 116
>RF00906;MIR1122;AC120529.3/33430-33575 39947:Oryza sativa Japonica
Group
Length = 146
Score = 54.0 bits (27), Expect = 6e-07
Identities = 57/67 (85%)
Strand = Plus / Minus
Query: 95 attcattaacatcaatatgaatgtggagaatgctgaaatgacttacattgtgaaatggag 154
||||||||||||| |||||||||||| |||||| || | |||||||| ||||| ||||
Sbjct: 70 attcattaacatctatatgaatgtgggcaatgctagaaagtcttacattatgaaacggag 11
Query: 155 gaagtat 161
| |||||
Sbjct: 10 ggagtat 4
Score = 48.1 bits (24), Expect = 4e-05
Identities = 36/40 (90%)
Strand = Plus / Plus
Query: 40 gcatttcccacattcatattgaagttaatgaatgtagaca 79
||||| ||||||||||||| || |||||||||| ||||||
Sbjct: 38 gcattgcccacattcatatagatgttaatgaatttagaca 77
>RF00906;MIR1122;AAAA02003147.1/1613-1521 39946:Oryza sativa Indica
Group
Length = 93
Score = 54.0 bits (27), Expect = 6e-07
Identities = 30/31 (96%)
Strand = Plus / Minus
Query: 131 aatgacttacattgtgaaatggaggaagtat 161
||||||||||||||||||| |||||||||||
Sbjct: 34 aatgacttacattgtgaaacggaggaagtat 4
Score = 44.1 bits (22), Expect = 6e-04
Identities = 28/30 (93%)
Strand = Plus / Plus
Query: 131 aatgacttacattgtgaaatggaggaagta 160
||||||||||||||||||| |||| |||||
Sbjct: 60 aatgacttacattgtgaaacggagtaagta 89
>RF00906;MIR1122;AC145388.2/115185-115325 39947:Oryza sativa
Japonica Group
Length = 141
Score = 54.0 bits (27), Expect = 6e-07
Identities = 39/43 (90%)
Strand = Plus / Plus
Query: 40 gcatttcccacattcatattgaagttaatgaatgtagacatat 82
||||| |||||||||| || ||||||||||||| |||||||||
Sbjct: 12 gcattgcccacattcacatagaagttaatgaatctagacatat 54
Score = 50.1 bits (25), Expect = 1e-05
Identities = 37/41 (90%)
Strand = Plus / Minus
Query: 40 gcatttcccacattcatattgaagttaatgaatgtagacat 80
||||| |||||||||| || ||||||||||||| |||||||
Sbjct: 130 gcattgcccacattcacatagaagttaatgaatctagacat 90
>RF00906;MIR1122;AP006159.3/37361-37232 39947:Oryza sativa Japonica
Group
Length = 130
Score = 54.0 bits (27), Expect = 6e-07
Identities = 30/31 (96%)
Strand = Plus / Plus
Query: 131 aatgacttacattgtgaaatggaggaagtat 161
||||||||||||||||||| |||||||||||
Sbjct: 97 aatgacttacattgtgaaacggaggaagtat 127
Score = 48.1 bits (24), Expect = 4e-05
Identities = 51/60 (85%)
Strand = Plus / Plus
Query: 7 tactccctccagttcacaatttaagtcagtgtggcatttcccacattcatattgaagtta 66
|||||||||| |||||||| ||||| | | | |||||||||||||||| ||||| ||||
Sbjct: 5 tactccctccgtttcacaatataagttattctagcatttcccacattcacattgatgtta 64
>RF00906;MIR1122;AACV01007579.1/212-348 39947:Oryza sativa Japonica
Group
Length = 137
Score = 54.0 bits (27), Expect = 6e-07
Identities = 39/43 (90%)
Strand = Plus / Minus
Query: 40 gcatttcccacattcatattgaagttaatgaatgtagacatat 82
||||| |||||||||| || ||||||||||||| |||||||||
Sbjct: 128 gcattgcccacattcacatagaagttaatgaatctagacatat 86
Score = 50.1 bits (25), Expect = 1e-05
Identities = 37/41 (90%)
Strand = Plus / Plus
Query: 40 gcatttcccacattcatattgaagttaatgaatgtagacat 80
||||| |||||||||| || ||||||||||||| |||||||
Sbjct: 10 gcattgcccacattcacatagaagttaatgaatctagacat 50
>RF00906;MIR1122;AAAA02028024.1/19895-19754 39946:Oryza sativa
Indica Group
Length = 142
Score = 52.0 bits (26), Expect = 2e-06
Identities = 41/46 (89%)
Strand = Plus / Minus
Query: 41 catttcccacattcatattgaagttaatgaatgtagacatatatat 86
|||| ||||||||||||| || | |||||||| |||||||||||||
Sbjct: 104 cattgcccacattcatatagatgctaatgaatctagacatatatat 59
Score = 44.1 bits (22), Expect = 6e-04
Identities = 37/42 (88%)
Strand = Plus / Plus
Query: 79 atatatatgtatgtagattcattaacatcaatatgaatgtgg 120
|||||||| | | ||||||||||| |||| ||||||||||||
Sbjct: 57 atatatatatgtctagattcattagcatctatatgaatgtgg 98
>RF00906;MIR1122;AAAA02001474.1/15209-15351 39946:Oryza sativa
Indica Group
Length = 143
Score = 52.0 bits (26), Expect = 2e-06
Identities = 60/70 (85%), Gaps = 1/70 (1%)
Strand = Plus / Plus
Query: 92 tagattcattaacatcaatatgaatgtggagaatgctgaaatgacttacattgtgaaatg 151
|||||||| ||||||| | |||||||||| |||||| || | |||||||||||||| |
Sbjct: 72 tagattcaataacatctaaatgaatgtggc-aatgctagaaagtcttacattgtgaaacg 130
Query: 152 gaggaagtat 161
||||||||||
Sbjct: 131 gaggaagtat 140
>RF00906;MIR1122;AACV01012859.1/32289-32424 39947:Oryza sativa
Japonica Group
Length = 136
Score = 52.0 bits (26), Expect = 2e-06
Identities = 50/58 (86%)
Strand = Plus / Plus
Query: 92 tagattcattaacatcaatatgaatgtggagaatgctgaaatgacttacattgtgaaa 149
|||||||||||||||| ||||| |||||| |||||| ||||| ||||||| |||||
Sbjct: 64 tagattcattaacatctatatgcatgtgggcaatgctagaatgatttacattatgaaa 121
Score = 44.1 bits (22), Expect = 6e-04
Identities = 28/30 (93%)
Strand = Plus / Minus
Query: 131 aatgacttacattgtgaaatggaggaagta 160
||||||||||||| ||||| ||||||||||
Sbjct: 34 aatgacttacattatgaaacggaggaagta 5
>RF00906;MIR1122;AP008214.1/21547670-21547576 39947:Oryza sativa
Japonica Group
Length = 95
Score = 52.0 bits (26), Expect = 2e-06
Identities = 29/30 (96%)
Strand = Plus / Minus
Query: 131 aatgacttacattgtgaaatggaggaagta 160
||||||||||||||||||| ||||||||||
Sbjct: 34 aatgacttacattgtgaaacggaggaagta 5
>RF00906;MIR1122;ABRL01001491.1/12562-12416 65489:Oryza barthii
Length = 147
Score = 52.0 bits (26), Expect = 2e-06
Identities = 50/58 (86%)
Strand = Plus / Minus
Query: 104 catcaatatgaatgtggagaatgctgaaatgacttacattgtgaaatggaggaagtat 161
|||||||||||||||| ||| || ||||||||||||||||||| ||||| |||||
Sbjct: 61 catcaatatgaatgtgagaaatactagaatgacttacattgtgaaacggagggagtat 4
Score = 46.1 bits (23), Expect = 2e-04
Identities = 47/55 (85%)
Strand = Plus / Plus
Query: 7 tactccctccagttcacaatttaagtcagtgtggcatttcccacattcatattga 61
|||||||||| |||||||| ||||||| | | | ||||| ||||||||||||||
Sbjct: 5 tactccctccgtttcacaatgtaagtcattctagtatttctcacattcatattga 59
Score = 44.1 bits (22), Expect = 6e-04
Identities = 40/46 (86%)
Strand = Plus / Plus
Query: 104 catcaatatgaatgtggagaatgctgaaatgacttacattgtgaaa 149
||||||||| |||||| | |||| | |||||||||||||| |||||
Sbjct: 87 catcaatataaatgtgaaaaatgttaaaatgacttacattatgaaa 132
>RF00906;MIR1122;AC134931.2/49884-50026 39947:Oryza sativa Japonica
Group
Length = 143
Score = 52.0 bits (26), Expect = 2e-06
Identities = 50/58 (86%)
Strand = Plus / Plus
Query: 104 catcaatatgaatgtggagaatgctgaaatgacttacattgtgaaatggaggaagtat 161
||||||||| ||| |||| |||||| ||||||||| ||| ||||||||||| |||||
Sbjct: 83 catcaatataaatatggaaaatgctagaatgacttatattatgaaatggagggagtat 140
>RF00906;MIR1122;AACV01009998.1/1442-1290 39947:Oryza sativa
Japonica Group
Length = 153
Score = 52.0 bits (26), Expect = 2e-06
Identities = 44/50 (88%)
Strand = Plus / Plus
Query: 114 aatgtggagaatgctgaaatgacttacattgtgaaatggaggaagtatgt 163
||||||| |||||| ||||||||||||||||||| ||||| |||||||
Sbjct: 103 aatgtgggaaatgctagaatgacttacattgtgaaacggagggagtatgt 152
Score = 50.1 bits (25), Expect = 1e-05
Identities = 46/53 (86%)
Strand = Plus / Minus
Query: 109 atatgaatgtggagaatgctgaaatgacttacattgtgaaatggaggaagtat 161
|||| ||||||| |||||| ||||||||||||||||||| ||||| |||||
Sbjct: 56 atataaatgtgggaaatgctagaatgacttacattgtgaaacggagggagtat 4
Score = 48.1 bits (24), Expect = 4e-05
Identities = 45/52 (86%)
Strand = Plus / Plus
Query: 7 tactccctccagttcacaatttaagtcagtgtggcatttcccacattcatat 58
|||||||||| |||||||| ||||||| | | |||||||||||||| ||||
Sbjct: 5 tactccctccgtttcacaatgtaagtcattctagcatttcccacatttatat 56
Score = 46.1 bits (23), Expect = 2e-04
Identities = 41/47 (87%)
Strand = Plus / Minus
Query: 7 tactccctccagttcacaatttaagtcagtgtggcatttcccacatt 53
|||||||||| |||||||| ||||||| | | ||||||||||||||
Sbjct: 149 tactccctccgtttcacaatgtaagtcattctagcatttcccacatt 103
>RF00906;MIR1122;AACV01016547.1/15069-15198 39947:Oryza sativa
Japonica Group
Length = 130
Score = 52.0 bits (26), Expect = 2e-06
Identities = 59/70 (84%)
Strand = Plus / Plus
Query: 92 tagattcattaacatcaatatgaatgtggagaatgctgaaatgacttacattgtgaaatg 151
|||||||||||||||| |||||||||||| |||||| || | |||| | | ||||| |
Sbjct: 58 tagattcattaacatctatatgaatgtgggcaatgctagaaagtcttataatatgaaacg 117
Query: 152 gaggaagtat 161
||||||||||
Sbjct: 118 gaggaagtat 127
Score = 50.1 bits (25), Expect = 1e-05
Identities = 37/41 (90%)
Strand = Plus / Minus
Query: 40 gcatttcccacattcatattgaagttaatgaatgtagacat 80
||||| ||||||||||||| || |||||||||| |||||||
Sbjct: 93 gcattgcccacattcatatagatgttaatgaatctagacat 53
>RF00906;MIR1122;AAAA02023450.1/14767-14902 39946:Oryza sativa
Indica Group
Length = 136
Score = 50.1 bits (25), Expect = 1e-05
Identities = 28/29 (96%)
Strand = Plus / Plus
Query: 92 tagattcattaacatcaatatgaatgtgg 120
|||||||||||||||| ||||||||||||
Sbjct: 64 tagattcattaacatctatatgaatgtgg 92
>RF00906;MIR1122;AAAA02033622.1/8442-8581 39946:Oryza sativa Indica
Group
Length = 140
Score = 50.1 bits (25), Expect = 1e-05
Identities = 46/53 (86%)
Strand = Plus / Plus
Query: 108 aatatgaatgtggagaatgctgaaatgacttacattgtgaaatggaggaagta 160
||||||||||||| ||| || ||| ||||||||||||||| ||||||||||
Sbjct: 88 aatatgaatgtgggaaattctacaataacttacattgtgaaacggaggaagta 140
Score = 44.1 bits (22), Expect = 6e-04
Identities = 25/26 (96%)
Strand = Plus / Minus
Query: 135 acttacattgtgaaatggaggaagta 160
||||||||||||||| ||||||||||
Sbjct: 30 acttacattgtgaaacggaggaagta 5
>RF00906;MIR1122;AC145367.2/80971-81106 39947:Oryza sativa Japonica
Group
Length = 136
Score = 50.1 bits (25), Expect = 1e-05
Identities = 28/29 (96%)
Strand = Plus / Plus
Query: 92 tagattcattaacatcaatatgaatgtgg 120
|||||||||||||||| ||||||||||||
Sbjct: 64 tagattcattaacatctatatgaatgtgg 92
>RF00906;MIR1122;AP005473.4/59321-59460 39947:Oryza sativa Japonica
Group
Length = 140
Score = 50.1 bits (25), Expect = 1e-05
Identities = 58/69 (84%)
Strand = Plus / Plus
Query: 92 tagattcattaacatcaatatgaatgtggagaatgctgaaatgacttacattgtgaaatg 151
|||||||||||||||| ||||| |||||| |||||| || | |||| ||||||||| |
Sbjct: 68 tagattcattaacatctatatgtatgtgggtaatgctagaaagtcttatattgtgaaacg 127
Query: 152 gaggaagta 160
|||| ||||
Sbjct: 128 gagggagta 136
>RF00906;MIR1122;AP008210.1/22180576-22180487 39947:Oryza sativa
Japonica Group
Length = 90
Score = 50.1 bits (25), Expect = 1e-05
Identities = 40/45 (88%)
Strand = Plus / Minus
Query: 94 gattcattaacatcaatatgaatgtggagaatgctgaaatgactt 138
||||||||| ||||||||||||||||| |||||| ||||||||
Sbjct: 45 gattcattagcatcaatatgaatgtgggaaatgctagaatgactt 1
Score = 50.1 bits (25), Expect = 1e-05
Identities = 31/33 (93%)
Strand = Plus / Plus
Query: 40 gcatttcccacattcatattgaagttaatgaat 72
|||||||||||||||||||||| | ||||||||
Sbjct: 12 gcatttcccacattcatattgatgctaatgaat 44
Score = 50.1 bits (25), Expect = 1e-05
Identities = 31/33 (93%)
Strand = Plus / Minus
Query: 40 gcatttcccacattcatattgaagttaatgaat 72
|||||||||||||||||||||| | ||||||||
Sbjct: 79 gcatttcccacattcatattgatgctaatgaat 47
Score = 46.1 bits (23), Expect = 2e-04
Identities = 26/27 (96%)
Strand = Plus / Plus
Query: 94 gattcattaacatcaatatgaatgtgg 120
||||||||| |||||||||||||||||
Sbjct: 46 gattcattagcatcaatatgaatgtgg 72
>RF00906;MIR1122;AP008213.1/2356452-2356313 39947:Oryza sativa
Japonica Group
Length = 140
Score = 50.1 bits (25), Expect = 1e-05
Identities = 58/69 (84%)
Strand = Plus / Minus
Query: 92 tagattcattaacatcaatatgaatgtggagaatgctgaaatgacttacattgtgaaatg 151
|||||||||||||||| ||||| |||||| |||||| || | |||| ||||||||| |
Sbjct: 73 tagattcattaacatctatatgtatgtgggtaatgctagaaagtcttatattgtgaaacg 14
Query: 152 gaggaagta 160
|||| ||||
Sbjct: 13 gagggagta 5
>RF00906;MIR1122;AACV01027096.1/420-516 39947:Oryza sativa Japonica
Group
Length = 97
Score = 50.1 bits (25), Expect = 1e-05
Identities = 55/65 (84%)
Strand = Plus / Plus
Query: 97 tcattaacatcaatatgaatgtggagaatgctgaaatgacttacattgtgaaatggagga 156
||||| |||||||||| |||||| |||||| ||||||||| ||||| ||| ||||||
Sbjct: 30 tcatttacatcaatataaatgtgagaaatgctagaatgacttatattgtaaaacggagga 89
Query: 157 agtat 161
|||||
Sbjct: 90 agtat 94
>RF00906;MIR1122;AP003932.3/46760-46610 39947:Oryza sativa Japonica
Group
Length = 151
Score = 50.1 bits (25), Expect = 1e-05
Identities = 58/69 (84%)
Strand = Plus / Minus
Query: 92 tagattcattaacatcaatatgaatgtggagaatgctgaaatgacttacattgtgaaatg 151
|||||||||||||||| | |||||||| |||||| || | |||||||||||||| |
Sbjct: 73 tagattcattaacatctaagtgaatgtgagcaatgctagaaagtcttacattgtgaaacg 14
Query: 152 gaggaagta 160
|||||||||
Sbjct: 13 gaggaagta 5
Score = 50.1 bits (25), Expect = 1e-05
Identities = 58/69 (84%)
Strand = Plus / Plus
Query: 92 tagattcattaacatcaatatgaatgtggagaatgctgaaatgacttacattgtgaaatg 151
|||||||||||||||| ||||| |||||| |||||| || | |||||||| ||||| |
Sbjct: 79 tagattcattaacatctatatgtatgtgggcaatgctagaaagtcttacattatgaaacg 138
Query: 152 gaggaagta 160
|||| ||||
Sbjct: 139 gagggagta 147
>RF00906;MIR1122;AL844497.4/117501-117363 4530:Oryza sativa (rice)
Length = 139
Score = 50.1 bits (25), Expect = 1e-05
Identities = 34/37 (91%)
Strand = Plus / Plus
Query: 92 tagattcattaacatcaatatgaatgtggagaatgct 128
||||||||||||||| ||||||||||||| ||||||
Sbjct: 67 tagattcattaacatatatatgaatgtggacaatgct 103
>RF00906;MIR1122;AAAA02025818.1/4289-4148 39946:Oryza sativa Indica
Group
Length = 142
Score = 50.1 bits (25), Expect = 1e-05
Identities = 58/69 (84%)
Strand = Plus / Plus
Query: 92 tagattcattaacatcaatatgaatgtggagaatgctgaaatgacttacattgtgaaatg 151
|||||||| ||||||| ||| ||||||||| |||| | ||||||||||||| | ||| |
Sbjct: 70 tagattcactaacatccatacgaatgtggaaaatgttagaatgacttacattataaaacg 129
Query: 152 gaggaagta 160
|||| ||||
Sbjct: 130 gagggagta 138
>RF00906;MIR1122;AAAA02022087.1/9518-9625 39946:Oryza sativa
Indica Group
Length = 108
Score = 48.1 bits (24), Expect = 4e-05
Identities = 48/56 (85%)
Strand = Plus / Plus
Query: 6 gtactccctccagttcacaatttaagtcagtgtggcatttcccacattcatattga 61
||||||||||| |||||||| ||||||| | | ||||||||||| || |||||||
Sbjct: 4 gtactccctccgtttcacaatgtaagtcattctagcatttcccacgtttatattga 59
Score = 46.1 bits (23), Expect = 2e-04
Identities = 47/55 (85%)
Strand = Plus / Minus
Query: 106 tcaatatgaatgtggagaatgctgaaatgacttacattgtgaaatggaggaagta 160
||||||| || |||| |||||| ||||||||||||||||||| ||||| ||||
Sbjct: 59 tcaatataaacgtgggaaatgctagaatgacttacattgtgaaacggagggagta 5
>RF00906;MIR1122;AP004764.2/29265-29128 39947:Oryza sativa Japonica
Group
Length = 138
Score = 48.1 bits (24), Expect = 4e-05
Identities = 69/83 (83%), Gaps = 2/83 (2%)
Strand = Plus / Minus
Query: 81 atatatgtatg--tagattcattaacatcaatatgaatgtggagaatgctgaaatgactt 138
||||||||||| ||||||| |||||||| |||||||||||| |||||| || | |||
Sbjct: 86 atatatgtatgcctagattcgttaacatctatatgaatgtgggcaatgctagaaagtctt 27
Query: 139 acattgtgaaatggaggaagtat 161
| | | ||||| |||||||||||
Sbjct: 26 ataatatgaaacggaggaagtat 4
