miRNEST 2.0: an integrative microRNA resource miRNEST 2.0, an integrative microRNA resource :: BLAST


>54884_vvi-miR399h:pmrd
          Length = 90

 Score = 56.0 bits (28), Expect = 6e-09
 Identities = 28/28 (100%)
 Strand = Plus / Minus

                                      
Query: 10 aatggcagggcaattctcctttggcaaa 37
          ||||||||||||||||||||||||||||
Sbjct: 85 aatggcagggcaattctcctttggcaaa 58




>52804_ptc-miRf10982-akr:pmrd
          Length = 94

 Score = 56.0 bits (28), Expect = 6e-09
 Identities = 28/28 (100%)
 Strand = Plus / Plus

                                      
Query: 10 aatggcagggcaattctcctttggcaaa 37
          ||||||||||||||||||||||||||||
Sbjct: 2  aatggcagggcaattctcctttggcaaa 29




>51752_ptc-miR399f:pmrd
          Length = 101

 Score = 56.0 bits (28), Expect = 6e-09
 Identities = 28/28 (100%)
 Strand = Plus / Minus

                                      
Query: 10 aatggcagggcaattctcctttggcaaa 37
          ||||||||||||||||||||||||||||
Sbjct: 97 aatggcagggcaattctcctttggcaaa 70




>55091_zma-miR399a:pmrd
          Length = 123

 Score = 54.0 bits (27), Expect = 2e-08
 Identities = 27/27 (100%)
 Strand = Plus / Minus

                                      
Query: 10  aatggcagggcaattctcctttggcaa 36
           |||||||||||||||||||||||||||
Sbjct: 109 aatggcagggcaattctcctttggcaa 83




>54496_sbi-miR399h:pmrd
          Length = 132

 Score = 52.0 bits (26), Expect = 9e-08
 Identities = 26/26 (100%)
 Strand = Plus / Minus

                                     
Query: 10  aatggcagggcaattctcctttggca 35
           ||||||||||||||||||||||||||
Sbjct: 118 aatggcagggcaattctcctttggca 93




>53710_ptc-miRf11888-akr:pmrd
          Length = 89

 Score = 52.0 bits (26), Expect = 9e-08
 Identities = 26/26 (100%)
 Strand = Plus / Plus

                                    
Query: 10 aatggcagggcaattctcctttggca 35
          ||||||||||||||||||||||||||
Sbjct: 3  aatggcagggcaattctcctttggca 28




>51753_ptc-miR399g:pmrd
          Length = 94

 Score = 52.0 bits (26), Expect = 9e-08
 Identities = 26/26 (100%)
 Strand = Plus / Minus

                                    
Query: 10 aatggcagggcaattctcctttggca 35
          ||||||||||||||||||||||||||
Sbjct: 90 aatggcagggcaattctcctttggca 65




>50193_osa-miRf10978-akr:pmrd
          Length = 105

 Score = 52.0 bits (26), Expect = 9e-08
 Identities = 26/26 (100%)
 Strand = Plus / Minus

                                     
Query: 10  aatggcagggcaattctcctttggca 35
           ||||||||||||||||||||||||||
Sbjct: 104 aatggcagggcaattctcctttggca 79




>48965_osa-miR399b:pmrd
          Length = 97

 Score = 52.0 bits (26), Expect = 9e-08
 Identities = 26/26 (100%)
 Strand = Plus / Minus

                                    
Query: 10 aatggcagggcaattctcctttggca 35
          ||||||||||||||||||||||||||
Sbjct: 92 aatggcagggcaattctcctttggca 67




>48752_mtr-miR399c:pmrd
          Length = 119

 Score = 50.1 bits (25), Expect = 4e-07
 Identities = 28/29 (96%)
 Strand = Plus / Minus

                                        
Query: 9   aaatggcagggcaattctcctttggcaaa 37
           |||||||||||||| ||||||||||||||
Sbjct: 106 aaatggcagggcaaatctcctttggcaaa 78




>54498_sbi-miR399j:pmrd
          Length = 93

 Score = 48.1 bits (24), Expect = 1e-06
 Identities = 24/24 (100%)
 Strand = Plus / Minus

                                  
Query: 13 ggcagggcaattctcctttggcaa 36
          ||||||||||||||||||||||||
Sbjct: 93 ggcagggcaattctcctttggcaa 70




>54877_vvi-miR399a:pmrd
          Length = 97

 Score = 46.1 bits (23), Expect = 6e-06
 Identities = 26/27 (96%)
 Strand = Plus / Minus

                                     
Query: 15 cagggcaattctcctttggcaaagcag 41
          ||||||||||||||||||||| |||||
Sbjct: 87 cagggcaattctcctttggcagagcag 61




>48964_osa-miR399a:pmrd
          Length = 149

 Score = 46.1 bits (23), Expect = 6e-06
 Identities = 26/27 (96%)
 Strand = Plus / Minus

                                      
Query: 9   aaatggcagggcaattctcctttggca 35
           |||| ||||||||||||||||||||||
Sbjct: 145 aaatcgcagggcaattctcctttggca 119




>55102_zma-miR399l:pmrd
          Length = 86

 Score = 44.1 bits (22), Expect = 2e-05
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                
Query: 15 cagggcaattctcctttggcaa 36
          ||||||||||||||||||||||
Sbjct: 85 cagggcaattctcctttggcaa 64




>55093_zma-miR399c:pmrd
          Length = 207

 Score = 44.1 bits (22), Expect = 2e-05
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                 
Query: 14  gcagggcaattctcctttggca 35
           ||||||||||||||||||||||
Sbjct: 189 gcagggcaattctcctttggca 168




>54491_sbi-miR399c:pmrd
          Length = 130

 Score = 44.1 bits (22), Expect = 2e-05
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                 
Query: 14  gcagggcaattctcctttggca 35
           ||||||||||||||||||||||
Sbjct: 112 gcagggcaattctcctttggca 91




>54489_sbi-miR399a:pmrd
          Length = 137

 Score = 44.1 bits (22), Expect = 2e-05
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                 
Query: 14  gcagggcaattctcctttggca 35
           ||||||||||||||||||||||
Sbjct: 119 gcagggcaattctcctttggca 98




>48966_osa-miR399c:pmrd
          Length = 110

 Score = 44.1 bits (22), Expect = 2e-05
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                 
Query: 14  gcagggcaattctcctttggca 35
           ||||||||||||||||||||||
Sbjct: 101 gcagggcaattctcctttggca 80




>55101_zma-miR399k:pmrd
          Length = 168

 Score = 42.1 bits (21), Expect = 9e-05
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                
Query: 15  cagggcaattctcctttggca 35
           |||||||||||||||||||||
Sbjct: 168 cagggcaattctcctttggca 148




>48316_bdi-miR399:pmrd
          Length = 100

 Score = 40.1 bits (20), Expect = 4e-04
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                  
Query: 12 tggcagggcaattctcctttggca 35
          |||||||| |||||||||||||||
Sbjct: 96 tggcagggtaattctcctttggca 73