miRNEST 2.0, an integrative microRNA resource :: BLAST
>40338_rco-MIR159:mirbase
Length = 180
Score = 196 bits (99), Expect = 4e-51
Identities = 165/185 (89%), Gaps = 9/185 (4%)
Strand = Plus / Plus
Query: 2 agtggagctccttgaagtccaatagaggatcttgctgggtagattgagctgctgagctat 61
|||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||
Sbjct: 2 agtggagctccttgaagtccaatagaggatcttgatgggtagattgagctgctgagctat 61
Query: 62 ggatcccacagccctatctcataataaagactctagtcttcttggataggcttgtggctt 121
||||||||||||||||| | | ||| | || | |||||||||||||||||||
Sbjct: 62 ggatcccacagccctat----aagcagagattata---attttggataggcttgtggctt 114
Query: 122 gcatatctcaggagcttcattacctcttatgttagatccttgtttggattgaagggagct 181
||||||||||||||||||||||| ||| | |||||||||||||||||||||||||||||
Sbjct: 115 gcatatctcaggagcttcattac--cttgtattagatccttgtttggattgaagggagct 172
Query: 182 ctaca 186
|||||
Sbjct: 173 ctaca 177
>41572_vvi-MIR159c:mirbase
Length = 190
Score = 137 bits (69), Expect = 3e-33
Identities = 159/186 (85%), Gaps = 11/186 (5%)
Strand = Plus / Plus
Query: 2 agtggagctccttgaagtccaatagaggatcttgctgggtagattgagctgctgagctat 61
|||||||||||||||||||||||||||| |||| ||||||||||||||||||||| |||
Sbjct: 7 agtggagctccttgaagtccaatagagggtcttactgggtagattgagctgctgacttat 66
Query: 62 ggatcccacagccctatctcat-aataaagactctagtcttcttggataggcttgtggct 120
|||||||||||||||||| | | ||| | | | ||||||||||||||||||
Sbjct: 67 ggatcccacagccctatcccgtcaatgggg------ggc--attggataggcttgtggct 118
Query: 121 tgcatatctcaggagcttcattacctcttatgttagatccttgtttggattgaagggagc 180
||||||||||||||||| ||||| || | ||||||||||||||||||||||||||||
Sbjct: 119 tgcatatctcaggagctgcatta--tccaagtttagatccttgtttggattgaagggagc 176
Query: 181 tctaca 186
||||||
Sbjct: 177 tctaca 182
>41300_ptc-MIR159b:mirbase
Length = 187
Score = 115 bits (58), Expect = 1e-26
Identities = 73/78 (93%)
Strand = Plus / Plus
Query: 2 agtggagctccttgaagtccaatagaggatcttgctgggtagattgagctgctgagctat 61
|||||||||||||||||||||||||| | || |||||||||||| |||||||||||||||
Sbjct: 9 agtggagctccttgaagtccaatagaagctcctgctgggtagatcgagctgctgagctat 68
Query: 62 ggatcccacagccctatc 79
| ||||||||||||||||
Sbjct: 69 gaatcccacagccctatc 86
>41301_ptc-MIR159c:mirbase
Length = 183
Score = 109 bits (55), Expect = 8e-25
Identities = 74/79 (93%), Gaps = 1/79 (1%)
Strand = Plus / Plus
Query: 2 agtggagctccttgaagtccaatagaggatcttgctgggtagattgagctgctgagctat 61
|||||||||||||||||||||||||||| |||||||||||||||| ||||||| ||||||
Sbjct: 9 agtggagctccttgaagtccaatagaggttcttgctgggtagattaagctgctaagctat 68
Query: 62 ggatcccacagccctatct 80
|||| |||||| |||||||
Sbjct: 69 ggat-ccacagtcctatct 86
>41299_ptc-MIR159a:mirbase
Length = 183
Score = 109 bits (55), Expect = 8e-25
Identities = 74/79 (93%), Gaps = 1/79 (1%)
Strand = Plus / Plus
Query: 2 agtggagctccttgaagtccaatagaggatcttgctgggtagattgagctgctgagctat 61
|||||||||||||||||||||||||||| |||||||||||||||| ||||||| ||||||
Sbjct: 9 agtggagctccttgaagtccaatagaggttcttgctgggtagattaagctgctaagctat 68
Query: 62 ggatcccacagccctatct 80
|||| |||||| |||||||
Sbjct: 69 ggat-ccacagtcctatct 86
>40397_ahy-MIR159:mirbase
Length = 197
Score = 109 bits (55), Expect = 8e-25
Identities = 67/71 (94%)
Strand = Plus / Plus
Query: 2 agtggagctccttgaagtccaatagaggatcttgctgggtagattgagctgctgagctat 61
|||||||||||||||||||||| ||||| ||||| |||||||||||||||||| ||||||
Sbjct: 1 agtggagctccttgaagtccaacagagggtcttggtgggtagattgagctgctaagctat 60
Query: 62 ggatcccacag 72
|||||||||||
Sbjct: 61 ggatcccacag 71
Score = 56.0 bits (28), Expect = 1e-08
Identities = 31/32 (96%)
Strand = Plus / Plus
Query: 155 agatccttgtttggattgaagggagctctaca 186
|||||||| |||||||||||||||||||||||
Sbjct: 148 agatccttatttggattgaagggagctctaca 179
>41024_pvu-MIR159a:mirbase
Length = 174
Score = 107 bits (54), Expect = 3e-24
Identities = 66/70 (94%)
Strand = Plus / Plus
Query: 3 gtggagctccttgaagtccaatagaggatcttgctgggtagattgagctgctgagctatg 62
|||||||||||||||||||||| ||||||||| |||||| |||||||||||| |||||||
Sbjct: 1 gtggagctccttgaagtccaattgaggatcttactgggtggattgagctgcttagctatg 60
Query: 63 gatcccacag 72
||||||||||
Sbjct: 61 gatcccacag 70
Score = 50.1 bits (25), Expect = 6e-07
Identities = 28/29 (96%)
Strand = Plus / Plus
Query: 157 atccttgtttggattgaagggagctctac 185
|||||| ||||||||||||||||||||||
Sbjct: 146 atccttctttggattgaagggagctctac 174
>41023_pvu-MIR159a:mirbase
Length = 174
Score = 107 bits (54), Expect = 3e-24
Identities = 66/70 (94%)
Strand = Plus / Plus
Query: 3 gtggagctccttgaagtccaatagaggatcttgctgggtagattgagctgctgagctatg 62
|||||||||||||||||||||| ||||||||| |||||| |||||||||||| |||||||
Sbjct: 1 gtggagctccttgaagtccaattgaggatcttactgggtggattgagctgcttagctatg 60
Query: 63 gatcccacag 72
||||||||||
Sbjct: 61 gatcccacag 70
Score = 50.1 bits (25), Expect = 6e-07
Identities = 28/29 (96%)
Strand = Plus / Plus
Query: 157 atccttgtttggattgaagggagctctac 185
|||||| ||||||||||||||||||||||
Sbjct: 146 atccttctttggattgaagggagctctac 174
>40432_gma-MIR159a:mirbase
Length = 214
Score = 103 bits (52), Expect = 5e-23
Identities = 67/72 (93%)
Strand = Plus / Plus
Query: 1 aagtggagctccttgaagtccaatagaggatcttgctgggtagattgagctgctgagcta 60
|||||||||||||||||||||||| ||||||||| |||||| ||||||||||| |||||
Sbjct: 18 aagtggagctccttgaagtccaattgaggatcttactgggtgaattgagctgcttagcta 77
Query: 61 tggatcccacag 72
||||||||||||
Sbjct: 78 tggatcccacag 89
>41218_csi-MIR159:mirbase
Length = 216
Score = 91.7 bits (46), Expect = 2e-19
Identities = 71/78 (91%), Gaps = 1/78 (1%)
Strand = Plus / Plus
Query: 2 agtggagctccttgaagtccaatagaggatcttgct-gggtagattgagctgctgagcta 60
|||||||||||||||||||||| ||||| ||| || ||||| |||||||||||||||||
Sbjct: 10 agtggagctccttgaagtccaaaagaggttctagcaagggtaaattgagctgctgagcta 69
Query: 61 tggatcccacagccctat 78
|||||||||||| |||||
Sbjct: 70 tggatcccacagtcctat 87
Score = 58.0 bits (29), Expect = 2e-09
Identities = 41/45 (91%)
Strand = Plus / Plus
Query: 106 gataggcttgtggcttgcatatctcaggagcttcattacctctta 150
|||||||||||||||||||||| || ||| |||||||||| ||||
Sbjct: 125 gataggcttgtggcttgcatatttctggaccttcattacccctta 169
>41528_sly-MIR159:mirbase
Length = 177
Score = 58.0 bits (29), Expect = 2e-09
Identities = 65/77 (84%)
Strand = Plus / Plus
Query: 4 tggagctccttgaagtccaatagaggatcttgctgggtagattgagctgctgagctatgg 63
|||||||||||||||||||| | | |||| | || || ||||||||||||| ||||||
Sbjct: 1 tggagctccttgaagtccaacaaaaaatctaacaggttaaattgagctgctgacctatgg 60
Query: 64 atcccacagccctatct 80
|| || |||||||||||
Sbjct: 61 attcctcagccctatct 77
Score = 44.1 bits (22), Expect = 4e-05
Identities = 31/34 (91%)
Strand = Plus / Plus
Query: 151 tgttagatccttgtttggattgaagggagctcta 184
|||| |||| || |||||||||||||||||||||
Sbjct: 144 tgtttgatcattttttggattgaagggagctcta 177
>40435_gma-MIR159d:mirbase
Length = 103
Score = 50.1 bits (25), Expect = 6e-07
Identities = 28/29 (96%)
Strand = Plus / Plus
Query: 44 attgagctgctgagctatggatcccacag 72
||||||||||| |||||||||||||||||
Sbjct: 7 attgagctgcttagctatggatcccacag 35
>40657_mtr-MIR159a:mirbase
Length = 183
Score = 46.1 bits (23), Expect = 9e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 164 tttggattgaagggagctctaca 186
|||||||||||||||||||||||
Sbjct: 152 tttggattgaagggagctctaca 174
>40311_bra-MIR159a:mirbase
Length = 185
Score = 46.1 bits (23), Expect = 9e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 164 tttggattgaagggagctctaca 186
|||||||||||||||||||||||
Sbjct: 163 tttggattgaagggagctctaca 185
>40261_bna-MIR159:mirbase
Length = 183
Score = 46.1 bits (23), Expect = 9e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 164 tttggattgaagggagctctaca 186
|||||||||||||||||||||||
Sbjct: 161 tttggattgaagggagctctaca 183
>39804_aly-MIR159a:mirbase
Length = 222
Score = 46.1 bits (23), Expect = 9e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 116 tggcttgcatatctcaggagctt 138
|||||||||||||||||||||||
Sbjct: 130 tggcttgcatatctcaggagctt 152
Score = 46.1 bits (23), Expect = 9e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 164 tttggattgaagggagctctaca 186
|||||||||||||||||||||||
Sbjct: 183 tttggattgaagggagctctaca 205
>42700_zma-MIR159k:mirbase
Length = 200
Score = 44.1 bits (22), Expect = 4e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 162 tgtttggattgaagggagctct 183
||||||||||||||||||||||
Sbjct: 177 tgtttggattgaagggagctct 198
>42699_zma-MIR159j:mirbase
Length = 252
Score = 44.1 bits (22), Expect = 4e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 162 tgtttggattgaagggagctct 183
||||||||||||||||||||||
Sbjct: 229 tgtttggattgaagggagctct 250
>42691_zma-MIR159b:mirbase
Length = 221
Score = 44.1 bits (22), Expect = 4e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 162 tgtttggattgaagggagctct 183
||||||||||||||||||||||
Sbjct: 180 tgtttggattgaagggagctct 201
>42634_tae-MIR159a:mirbase
Length = 177
Score = 44.1 bits (22), Expect = 4e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 162 tgtttggattgaagggagctct 183
||||||||||||||||||||||
Sbjct: 152 tgtttggattgaagggagctct 173
>41922_osa-MIR159f:mirbase
Length = 188
Score = 44.1 bits (22), Expect = 4e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 165 ttggattgaagggagctctaca 186
||||||||||||||||||||||
Sbjct: 159 ttggattgaagggagctctaca 180
>41883_hvu-MIR159b:mirbase
Length = 122
Score = 44.1 bits (22), Expect = 4e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 162 tgtttggattgaagggagctct 183
||||||||||||||||||||||
Sbjct: 9 tgtttggattgaagggagctct 30
>41882_hvu-MIR159a:mirbase
Length = 178
Score = 44.1 bits (22), Expect = 4e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 162 tgtttggattgaagggagctct 183
||||||||||||||||||||||
Sbjct: 154 tgtttggattgaagggagctct 175
>40016_ath-MIR159a:mirbase
Length = 184
Score = 44.1 bits (22), Expect = 4e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 164 tttggattgaagggagctctac 185
||||||||||||||||||||||
Sbjct: 163 tttggattgaagggagctctac 184
