miRNEST 2.0, an integrative microRNA resource :: BLAST
>54777_vvi-miR159c:pmrd
Length = 190
Score = 137 bits (69), Expect = 3e-33
Identities = 159/186 (85%), Gaps = 11/186 (5%)
Strand = Plus / Plus
Query: 2 agtggagctccttgaagtccaatagaggatcttgctgggtagattgagctgctgagctat 61
|||||||||||||||||||||||||||| |||| ||||||||||||||||||||| |||
Sbjct: 7 agtggagctccttgaagtccaatagagggtcttactgggtagattgagctgctgacttat 66
Query: 62 ggatcccacagccctatctcat-aataaagactctagtcttcttggataggcttgtggct 120
|||||||||||||||||| | | ||| | | | ||||||||||||||||||
Sbjct: 67 ggatcccacagccctatcccgtcaatgggg------ggc--attggataggcttgtggct 118
Query: 121 tgcatatctcaggagcttcattacctcttatgttagatccttgtttggattgaagggagc 180
||||||||||||||||| ||||| || | ||||||||||||||||||||||||||||
Sbjct: 119 tgcatatctcaggagctgcatta--tccaagtttagatccttgtttggattgaagggagc 176
Query: 181 tctaca 186
||||||
Sbjct: 177 tctaca 182
>51603_ptc-miR159b:pmrd
Length = 187
Score = 115 bits (58), Expect = 1e-26
Identities = 73/78 (93%)
Strand = Plus / Plus
Query: 2 agtggagctccttgaagtccaatagaggatcttgctgggtagattgagctgctgagctat 61
|||||||||||||||||||||||||| | || |||||||||||| |||||||||||||||
Sbjct: 9 agtggagctccttgaagtccaatagaagctcctgctgggtagatcgagctgctgagctat 68
Query: 62 ggatcccacagccctatc 79
| ||||||||||||||||
Sbjct: 69 gaatcccacagccctatc 86
>52093_ptc-miRf10271-akr:pmrd
Length = 174
Score = 109 bits (55), Expect = 8e-25
Identities = 74/79 (93%), Gaps = 1/79 (1%)
Strand = Plus / Plus
Query: 2 agtggagctccttgaagtccaatagaggatcttgctgggtagattgagctgctgagctat 61
|||||||||||||||||||||||||||| |||||||||||||||| ||||||| ||||||
Sbjct: 4 agtggagctccttgaagtccaatagaggttcttgctgggtagattaagctgctaagctat 63
Query: 62 ggatcccacagccctatct 80
|||| |||||| |||||||
Sbjct: 64 ggat-ccacagtcctatct 81
>51604_ptc-miR159c:pmrd
Length = 183
Score = 109 bits (55), Expect = 8e-25
Identities = 74/79 (93%), Gaps = 1/79 (1%)
Strand = Plus / Plus
Query: 2 agtggagctccttgaagtccaatagaggatcttgctgggtagattgagctgctgagctat 61
|||||||||||||||||||||||||||| |||||||||||||||| ||||||| ||||||
Sbjct: 9 agtggagctccttgaagtccaatagaggttcttgctgggtagattaagctgctaagctat 68
Query: 62 ggatcccacagccctatct 80
|||| |||||| |||||||
Sbjct: 69 ggat-ccacagtcctatct 86
>51602_ptc-miR159a:pmrd
Length = 183
Score = 109 bits (55), Expect = 8e-25
Identities = 74/79 (93%), Gaps = 1/79 (1%)
Strand = Plus / Plus
Query: 2 agtggagctccttgaagtccaatagaggatcttgctgggtagattgagctgctgagctat 61
|||||||||||||||||||||||||||| |||||||||||||||| ||||||| ||||||
Sbjct: 9 agtggagctccttgaagtccaatagaggttcttgctgggtagattaagctgctaagctat 68
Query: 62 ggatcccacagccctatct 80
|||| |||||| |||||||
Sbjct: 69 ggat-ccacagtcctatct 86
>54378_pvu-miR159:pmrd
Length = 174
Score = 107 bits (54), Expect = 3e-24
Identities = 66/70 (94%)
Strand = Plus / Plus
Query: 3 gtggagctccttgaagtccaatagaggatcttgctgggtagattgagctgctgagctatg 62
|||||||||||||||||||||| ||||||||| |||||| |||||||||||| |||||||
Sbjct: 1 gtggagctccttgaagtccaattgaggatcttactgggtggattgagctgcttagctatg 60
Query: 63 gatcccacag 72
||||||||||
Sbjct: 61 gatcccacag 70
Score = 50.1 bits (25), Expect = 6e-07
Identities = 28/29 (96%)
Strand = Plus / Plus
Query: 157 atccttgtttggattgaagggagctctac 185
|||||| ||||||||||||||||||||||
Sbjct: 146 atccttctttggattgaagggagctctac 174
>54377_pvu-miR159:pmrd
Length = 174
Score = 107 bits (54), Expect = 3e-24
Identities = 66/70 (94%)
Strand = Plus / Plus
Query: 3 gtggagctccttgaagtccaatagaggatcttgctgggtagattgagctgctgagctatg 62
|||||||||||||||||||||| ||||||||| |||||| |||||||||||| |||||||
Sbjct: 1 gtggagctccttgaagtccaattgaggatcttactgggtggattgagctgcttagctatg 60
Query: 63 gatcccacag 72
||||||||||
Sbjct: 61 gatcccacag 70
Score = 50.1 bits (25), Expect = 6e-07
Identities = 28/29 (96%)
Strand = Plus / Plus
Query: 157 atccttgtttggattgaagggagctctac 185
|||||| ||||||||||||||||||||||
Sbjct: 146 atccttctttggattgaagggagctctac 174
>48539_gma-miR159a:pmrd
Length = 214
Score = 103 bits (52), Expect = 5e-23
Identities = 67/72 (93%)
Strand = Plus / Plus
Query: 1 aagtggagctccttgaagtccaatagaggatcttgctgggtagattgagctgctgagcta 60
|||||||||||||||||||||||| ||||||||| |||||| ||||||||||| |||||
Sbjct: 18 aagtggagctccttgaagtccaattgaggatcttactgggtgaattgagctgcttagcta 77
Query: 61 tggatcccacag 72
||||||||||||
Sbjct: 78 tggatcccacag 89
>54540_sly-miR159:pmrd
Length = 177
Score = 58.0 bits (29), Expect = 2e-09
Identities = 65/77 (84%)
Strand = Plus / Plus
Query: 4 tggagctccttgaagtccaatagaggatcttgctgggtagattgagctgctgagctatgg 63
|||||||||||||||||||| | | |||| | || || ||||||||||||| ||||||
Sbjct: 1 tggagctccttgaagtccaacaaaaaatctaacaggttaaattgagctgctgacctatgg 60
Query: 64 atcccacagccctatct 80
|| || |||||||||||
Sbjct: 61 attcctcagccctatct 77
Score = 44.1 bits (22), Expect = 4e-05
Identities = 31/34 (91%)
Strand = Plus / Plus
Query: 151 tgttagatccttgtttggattgaagggagctcta 184
|||| |||| || |||||||||||||||||||||
Sbjct: 144 tgtttgatcattttttggattgaagggagctcta 177
>48701_mtr-miR159c:pmrd
Length = 44
Score = 46.1 bits (23), Expect = 9e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 164 tttggattgaagggagctctaca 186
|||||||||||||||||||||||
Sbjct: 1 tttggattgaagggagctctaca 23
>48686_ltu-miR159:pmrd
Length = 345
Score = 46.1 bits (23), Expect = 9e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 164 tttggattgaagggagctctaca 186
|||||||||||||||||||||||
Sbjct: 1 tttggattgaagggagctctaca 23
>48395_bra-miR159a:pmrd
Length = 185
Score = 46.1 bits (23), Expect = 9e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 164 tttggattgaagggagctctaca 186
|||||||||||||||||||||||
Sbjct: 163 tttggattgaagggagctctaca 185
>48339_bna-miR159:pmrd
Length = 183
Score = 46.1 bits (23), Expect = 9e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 164 tttggattgaagggagctctaca 186
|||||||||||||||||||||||
Sbjct: 161 tttggattgaagggagctctaca 183
>54931_zma-miR159b:pmrd
Length = 221
Score = 44.1 bits (22), Expect = 4e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 162 tgtttggattgaagggagctct 183
||||||||||||||||||||||
Sbjct: 180 tgtttggattgaagggagctct 201
>54673_tae-miR159a:pmrd
Length = 177
Score = 44.1 bits (22), Expect = 4e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 162 tgtttggattgaagggagctct 183
||||||||||||||||||||||
Sbjct: 152 tgtttggattgaagggagctct 173
>48824_osa-miR159f:pmrd
Length = 188
Score = 44.1 bits (22), Expect = 4e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 165 ttggattgaagggagctctaca 186
||||||||||||||||||||||
Sbjct: 159 ttggattgaagggagctctaca 180
>48728_mtr-miR319b:pmrd
Length = 42
Score = 44.1 bits (22), Expect = 4e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 165 ttggattgaagggagctctaca 186
||||||||||||||||||||||
Sbjct: 1 ttggattgaagggagctctaca 22
>48657_hvv-miR159b:pmrd
Length = 174
Score = 44.1 bits (22), Expect = 4e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 162 tgtttggattgaagggagctct 183
||||||||||||||||||||||
Sbjct: 152 tgtttggattgaagggagctct 173
>46931_ath-miR159a:pmrd
Length = 184
Score = 44.1 bits (22), Expect = 4e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 164 tttggattgaagggagctctac 185
||||||||||||||||||||||
Sbjct: 163 tttggattgaagggagctctac 184
