miRNEST 2.0, an integrative microRNA resource :: BLAST
>40646_lja-MIR396:mirbase
Length = 108
Score = 69.9 bits (35), Expect = 9e-13
Identities = 38/39 (97%)
Strand = Plus / Plus
Query: 17 gtcctctttgtattcttcctcagctttcttgaactgcat 55
||||||||||||||||||| |||||||||||||||||||
Sbjct: 1 gtcctctttgtattcttccacagctttcttgaactgcat 39
Score = 58.0 bits (29), Expect = 3e-09
Identities = 29/29 (100%)
Strand = Plus / Plus
Query: 190 ttgcggttcaataaagctgtgggaagata 218
|||||||||||||||||||||||||||||
Sbjct: 71 ttgcggttcaataaagctgtgggaagata 99
>41242_csi-MIR396b:mirbase
Length = 134
Score = 67.9 bits (34), Expect = 3e-12
Identities = 34/34 (100%)
Strand = Plus / Plus
Query: 189 gttgcggttcaataaagctgtgggaagatacaaa 222
||||||||||||||||||||||||||||||||||
Sbjct: 81 gttgcggttcaataaagctgtgggaagatacaaa 114
Score = 63.9 bits (32), Expect = 5e-11
Identities = 41/44 (93%)
Strand = Plus / Plus
Query: 13 tatggtcctctttgtattcttcctcagctttcttgaactgcatc 56
|||| ||||||||||||| |||| ||||||||||||||||||||
Sbjct: 1 tatgatcctctttgtatttttccacagctttcttgaactgcatc 44
>41058_ghr-MIR396b:mirbase
Length = 135
Score = 67.9 bits (34), Expect = 3e-12
Identities = 34/34 (100%)
Strand = Plus / Plus
Query: 189 gttgcggttcaataaagctgtgggaagatacaaa 222
||||||||||||||||||||||||||||||||||
Sbjct: 101 gttgcggttcaataaagctgtgggaagatacaaa 134
Score = 50.1 bits (25), Expect = 8e-07
Identities = 28/29 (96%)
Strand = Plus / Plus
Query: 26 gtattcttcctcagctttcttgaactgca 54
|||||||||| ||||||||||||||||||
Sbjct: 5 gtattcttccacagctttcttgaactgca 33
>41057_ghr-MIR396a:mirbase
Length = 136
Score = 67.9 bits (34), Expect = 3e-12
Identities = 34/34 (100%)
Strand = Plus / Plus
Query: 189 gttgcggttcaataaagctgtgggaagatacaaa 222
||||||||||||||||||||||||||||||||||
Sbjct: 101 gttgcggttcaataaagctgtgggaagatacaaa 134
Score = 50.1 bits (25), Expect = 8e-07
Identities = 28/29 (96%)
Strand = Plus / Plus
Query: 26 gtattcttcctcagctttcttgaactgca 54
|||||||||| ||||||||||||||||||
Sbjct: 5 gtattcttccacagctttcttgaactgca 33
>41435_ptc-MIR396a:mirbase
Length = 123
Score = 65.9 bits (33), Expect = 1e-11
Identities = 33/33 (100%)
Strand = Plus / Plus
Query: 189 gttgcggttcaataaagctgtgggaagatacaa 221
|||||||||||||||||||||||||||||||||
Sbjct: 91 gttgcggttcaataaagctgtgggaagatacaa 123
Score = 50.1 bits (25), Expect = 8e-07
Identities = 28/29 (96%)
Strand = Plus / Plus
Query: 26 gtattcttcctcagctttcttgaactgca 54
|||||||||| ||||||||||||||||||
Sbjct: 5 gtattcttccacagctttcttgaactgca 33
>40473_gma-MIR396a:mirbase
Length = 140
Score = 65.9 bits (33), Expect = 1e-11
Identities = 36/37 (97%)
Strand = Plus / Plus
Query: 20 ctctttgtattcttcctcagctttcttgaactgcatc 56
|||||||||||||||| ||||||||||||||||||||
Sbjct: 9 ctctttgtattcttccacagctttcttgaactgcatc 45
Score = 65.9 bits (33), Expect = 1e-11
Identities = 36/37 (97%)
Strand = Plus / Plus
Query: 190 ttgcggttcaataaagctgtgggaagatacaaatagg 226
||||||||||||||||||||||||||||||| |||||
Sbjct: 98 ttgcggttcaataaagctgtgggaagatacagatagg 134
>41139_tcc-MIR396b:mirbase
Length = 151
Score = 63.9 bits (32), Expect = 5e-11
Identities = 38/40 (95%)
Strand = Plus / Plus
Query: 14 atggtcctctttgtattcttcctcagctttcttgaactgc 53
|||| ||||||||||||||||| |||||||||||||||||
Sbjct: 3 atggccctctttgtattcttccacagctttcttgaactgc 42
Score = 54.0 bits (27), Expect = 5e-08
Identities = 30/31 (96%)
Strand = Plus / Plus
Query: 189 gttgcggttcaataaagctgtgggaagatac 219
||||| |||||||||||||||||||||||||
Sbjct: 107 gttgcagttcaataaagctgtgggaagatac 137
>41663_vvi-MIR396d:mirbase
Length = 120
Score = 61.9 bits (31), Expect = 2e-10
Identities = 31/31 (100%)
Strand = Plus / Plus
Query: 189 gttgcggttcaataaagctgtgggaagatac 219
|||||||||||||||||||||||||||||||
Sbjct: 84 gttgcggttcaataaagctgtgggaagatac 114
Score = 60.0 bits (30), Expect = 8e-10
Identities = 33/34 (97%)
Strand = Plus / Plus
Query: 22 ctttgtattcttcctcagctttcttgaactgcat 55
|||||||||||||| |||||||||||||||||||
Sbjct: 1 ctttgtattcttccacagctttcttgaactgcat 34
>41436_ptc-MIR396b:mirbase
Length = 132
Score = 61.9 bits (31), Expect = 2e-10
Identities = 31/31 (100%)
Strand = Plus / Plus
Query: 191 tgcggttcaataaagctgtgggaagatacaa 221
|||||||||||||||||||||||||||||||
Sbjct: 102 tgcggttcaataaagctgtgggaagatacaa 132
Score = 58.0 bits (29), Expect = 3e-09
Identities = 32/33 (96%)
Strand = Plus / Plus
Query: 22 ctttgtattcttcctcagctttcttgaactgca 54
|||||||||||||| ||||||||||||||||||
Sbjct: 1 ctttgtattcttccacagctttcttgaactgca 33
>40085_ath-MIR396a:mirbase
Length = 151
Score = 61.9 bits (31), Expect = 2e-10
Identities = 31/31 (100%)
Strand = Plus / Plus
Query: 190 ttgcggttcaataaagctgtgggaagataca 220
|||||||||||||||||||||||||||||||
Sbjct: 118 ttgcggttcaataaagctgtgggaagataca 148
Score = 52.0 bits (26), Expect = 2e-07
Identities = 29/30 (96%)
Strand = Plus / Plus
Query: 25 tgtattcttcctcagctttcttgaactgca 54
||||||||||| ||||||||||||||||||
Sbjct: 4 tgtattcttccacagctttcttgaactgca 33
>39877_aly-MIR396a:mirbase
Length = 172
Score = 60.0 bits (30), Expect = 8e-10
Identities = 30/30 (100%)
Strand = Plus / Plus
Query: 190 ttgcggttcaataaagctgtgggaagatac 219
||||||||||||||||||||||||||||||
Sbjct: 128 ttgcggttcaataaagctgtgggaagatac 157
Score = 56.0 bits (28), Expect = 1e-08
Identities = 34/36 (94%)
Strand = Plus / Plus
Query: 19 cctctttgtattcttcctcagctttcttgaactgca 54
||||| ||||||||||| ||||||||||||||||||
Sbjct: 11 cctctctgtattcttccacagctttcttgaactgca 46
>40727_mtr-MIR396b:mirbase
Length = 95
Score = 58.0 bits (29), Expect = 3e-09
Identities = 29/29 (100%)
Strand = Plus / Plus
Query: 190 ttgcggttcaataaagctgtgggaagata 218
|||||||||||||||||||||||||||||
Sbjct: 67 ttgcggttcaataaagctgtgggaagata 95
Score = 52.0 bits (26), Expect = 2e-07
Identities = 29/30 (96%)
Strand = Plus / Plus
Query: 27 tattcttcctcagctttcttgaactgcatc 56
||||||||| ||||||||||||||||||||
Sbjct: 1 tattcttccacagctttcttgaactgcatc 30
>42814_zma-MIR396h:mirbase
Length = 124
Score = 50.1 bits (25), Expect = 8e-07
Identities = 34/37 (91%)
Strand = Plus / Minus
Query: 21 tctttgtattcttcctcagctttcttgaactgcatct 57
||||||| |||||| |||||||||||||||||||||
Sbjct: 109 tctttgtgatcttccacagctttcttgaactgcatct 73
Score = 40.1 bits (20), Expect = 8e-04
Identities = 20/20 (100%)
Strand = Plus / Minus
Query: 195 gttcaataaagctgtgggaa 214
||||||||||||||||||||
Sbjct: 20 gttcaataaagctgtgggaa 1
>42808_zma-MIR396b:mirbase
Length = 136
Score = 50.1 bits (25), Expect = 8e-07
Identities = 34/37 (91%)
Strand = Plus / Plus
Query: 21 tctttgtattcttcctcagctttcttgaactgcatct 57
||||||| |||||| |||||||||||||||||||||
Sbjct: 10 tctttgtgatcttccacagctttcttgaactgcatct 46
Score = 40.1 bits (20), Expect = 8e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 195 gttcaataaagctgtgggaa 214
||||||||||||||||||||
Sbjct: 99 gttcaataaagctgtgggaa 118
>42583_sbi-MIR396b:mirbase
Length = 128
Score = 50.1 bits (25), Expect = 8e-07
Identities = 34/37 (91%)
Strand = Plus / Plus
Query: 21 tctttgtattcttcctcagctttcttgaactgcatct 57
||||||| |||||| |||||||||||||||||||||
Sbjct: 10 tctttgtgatcttccacagctttcttgaactgcatct 46
Score = 40.1 bits (20), Expect = 8e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 195 gttcaataaagctgtgggaa 214
||||||||||||||||||||
Sbjct: 91 gttcaataaagctgtgggaa 110
>42461_sof-MIR396:mirbase
Length = 134
Score = 50.1 bits (25), Expect = 8e-07
Identities = 34/37 (91%)
Strand = Plus / Plus
Query: 21 tctttgtattcttcctcagctttcttgaactgcatct 57
||||||| |||||| |||||||||||||||||||||
Sbjct: 10 tctttgtgatcttccacagctttcttgaactgcatct 46
Score = 40.1 bits (20), Expect = 8e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 195 gttcaataaagctgtgggaa 214
||||||||||||||||||||
Sbjct: 97 gttcaataaagctgtgggaa 116
>42027_osa-MIR396b:mirbase
Length = 116
Score = 50.1 bits (25), Expect = 8e-07
Identities = 28/29 (96%)
Strand = Plus / Plus
Query: 30 tcttcctcagctttcttgaactgcatctt 58
|||||| ||||||||||||||||||||||
Sbjct: 9 tcttccacagctttcttgaactgcatctt 37
Score = 40.1 bits (20), Expect = 8e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 195 gttcaataaagctgtgggaa 214
||||||||||||||||||||
Sbjct: 88 gttcaataaagctgtgggaa 107
>41241_csi-MIR396a:mirbase
Length = 153
Score = 50.1 bits (25), Expect = 8e-07
Identities = 34/37 (91%)
Strand = Plus / Plus
Query: 16 ggtcctctttgtattcttcctcagctttcttgaactg 52
|||||||||||| |||||| ||||||||||||||||
Sbjct: 5 ggtcctctttgtgatcttccacagctttcttgaactg 41
>41188_aqc-MIR396a:mirbase
Length = 122
Score = 50.1 bits (25), Expect = 8e-07
Identities = 25/25 (100%)
Strand = Plus / Plus
Query: 190 ttgcggttcaataaagctgtgggaa 214
|||||||||||||||||||||||||
Sbjct: 97 ttgcggttcaataaagctgtgggaa 121
Score = 40.1 bits (20), Expect = 8e-04
Identities = 23/24 (95%)
Strand = Plus / Plus
Query: 32 ttcctcagctttcttgaactgcat 55
|||| |||||||||||||||||||
Sbjct: 1 ttccacagctttcttgaactgcat 24
>41794_bdi-MIR396d:mirbase
Length = 152
Score = 48.1 bits (24), Expect = 3e-06
Identities = 27/28 (96%)
Strand = Plus / Plus
Query: 30 tcttcctcagctttcttgaactgcatct 57
|||||| |||||||||||||||||||||
Sbjct: 31 tcttccacagctttcttgaactgcatct 58
Score = 40.1 bits (20), Expect = 8e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 195 gttcaataaagctgtgggaa 214
||||||||||||||||||||
Sbjct: 101 gttcaataaagctgtgggaa 120
>42813_zma-MIR396g:mirbase
Length = 114
Score = 46.1 bits (23), Expect = 1e-05
Identities = 26/27 (96%)
Strand = Plus / Minus
Query: 30 tcttcctcagctttcttgaactgcatc 56
|||||| ||||||||||||||||||||
Sbjct: 113 tcttccacagctttcttgaactgcatc 87
Score = 40.1 bits (20), Expect = 8e-04
Identities = 20/20 (100%)
Strand = Plus / Minus
Query: 195 gttcaataaagctgtgggaa 214
||||||||||||||||||||
Sbjct: 20 gttcaataaagctgtgggaa 1
>42807_zma-MIR396a:mirbase
Length = 137
Score = 44.1 bits (22), Expect = 5e-05
Identities = 25/26 (96%)
Strand = Plus / Plus
Query: 30 tcttcctcagctttcttgaactgcat 55
|||||| |||||||||||||||||||
Sbjct: 19 tcttccacagctttcttgaactgcat 44
Score = 40.1 bits (20), Expect = 8e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 195 gttcaataaagctgtgggaa 214
||||||||||||||||||||
Sbjct: 100 gttcaataaagctgtgggaa 119
>42582_sbi-MIR396a:mirbase
Length = 125
Score = 44.1 bits (22), Expect = 5e-05
Identities = 25/26 (96%)
Strand = Plus / Plus
Query: 30 tcttcctcagctttcttgaactgcat 55
|||||| |||||||||||||||||||
Sbjct: 19 tcttccacagctttcttgaactgcat 44
Score = 40.1 bits (20), Expect = 8e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 195 gttcaataaagctgtgggaa 214
||||||||||||||||||||
Sbjct: 88 gttcaataaagctgtgggaa 107
>42472_ssp-MIR396:mirbase
Length = 95
Score = 44.1 bits (22), Expect = 5e-05
Identities = 25/26 (96%)
Strand = Plus / Plus
Query: 32 ttcctcagctttcttgaactgcatct 57
|||| |||||||||||||||||||||
Sbjct: 1 ttccacagctttcttgaactgcatct 26
>42026_osa-MIR396a:mirbase
Length = 154
Score = 42.1 bits (21), Expect = 2e-04
Identities = 24/25 (96%)
Strand = Plus / Plus
Query: 30 tcttcctcagctttcttgaactgca 54
|||||| ||||||||||||||||||
Sbjct: 9 tcttccacagctttcttgaactgca 33
Score = 40.1 bits (20), Expect = 8e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 195 gttcaataaagctgtgggaa 214
||||||||||||||||||||
Sbjct: 126 gttcaataaagctgtgggaa 145
>41793_bdi-MIR396c:mirbase
Length = 153
Score = 40.1 bits (20), Expect = 8e-04
Identities = 23/24 (95%)
Strand = Plus / Plus
Query: 30 tcttcctcagctttcttgaactgc 53
|||||| |||||||||||||||||
Sbjct: 31 tcttccacagctttcttgaactgc 54
Score = 40.1 bits (20), Expect = 8e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 195 gttcaataaagctgtgggaa 214
||||||||||||||||||||
Sbjct: 102 gttcaataaagctgtgggaa 121
