miRNEST 2.0: an integrative microRNA resource miRNEST 2.0, an integrative microRNA resource :: BLAST


BLASTX 2.2.20 [Feb-08-2009]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.
>sp|Q9FE67|ERF80_ARATH Ethylene-responsive transcription factor 9
           OS=Arabidopsis thaliana GN=ERF9 PE=2 SV=1
          Length = 200

 Score = 49.3 bits (116), Expect = 8e-06
 Identities = 23/26 (88%), Positives = 23/26 (88%)
 Frame = -2

Query: 170 EEAARAYDNAARRFRGSKAKTNFPPP 93
           EEAARAYD AAR FRGSKAKTNFP P
Sbjct: 66  EEAARAYDTAAREFRGSKAKTNFPLP 91




>sp|Q40477|ERF4_TOBAC Ethylene-responsive transcription factor 4
           OS=Nicotiana tabacum GN=ERF4 PE=1 SV=1
          Length = 225

 Score = 47.0 bits (110), Expect = 4e-05
 Identities = 21/26 (80%), Positives = 22/26 (84%)
 Frame = -2

Query: 170 EEAARAYDNAARRFRGSKAKTNFPPP 93
           EEAA+AYD AAR FRG KAKTNFP P
Sbjct: 60  EEAAKAYDTAAREFRGPKAKTNFPSP 85




>sp|Q9LW49|ERF4_NICSY Ethylene-responsive transcription factor 4
           OS=Nicotiana sylvestris GN=ERF4 PE=2 SV=1
          Length = 227

 Score = 46.2 bits (108), Expect = 6e-05
 Identities = 21/26 (80%), Positives = 22/26 (84%)
 Frame = -2

Query: 170 EEAARAYDNAARRFRGSKAKTNFPPP 93
           EEAA+AYD AAR FRG KAKTNFP P
Sbjct: 60  EEAAKAYDTAAREFRGPKAKTNFPLP 85




>sp|O80340|ERF78_ARATH Ethylene-responsive transcription factor 4
           OS=Arabidopsis thaliana GN=ERF4 PE=1 SV=1
          Length = 222

 Score = 45.8 bits (107), Expect = 8e-05
 Identities = 21/24 (87%), Positives = 22/24 (91%)
 Frame = -2

Query: 170 EEAARAYDNAARRFRGSKAKTNFP 99
           EEAARAYD AAR FRG+KAKTNFP
Sbjct: 58  EEAARAYDTAARDFRGAKAKTNFP 81




>sp|Q9SSA8|RA212_ARATH Ethylene-responsive transcription factor
           RAP2-12 OS=Arabidopsis thaliana GN=RAP2-12 PE=2 SV=1
          Length = 358

 Score = 45.4 bits (106), Expect = 1e-04
 Identities = 22/31 (70%), Positives = 23/31 (74%)
 Frame = -2

Query: 170 EEAARAYDNAARRFRGSKAKTNFPPPDTDIN 78
           EEAARAYD AARR RGSKAK NFP  +   N
Sbjct: 158 EEAARAYDAAARRIRGSKAKVNFPEENMKAN 188




>sp|O80339|ERF82_ARATH Ethylene-responsive transcription factor 3
           OS=Arabidopsis thaliana GN=ERF3 PE=1 SV=1
          Length = 225

 Score = 45.4 bits (106), Expect = 1e-04
 Identities = 24/41 (58%), Positives = 26/41 (63%)
 Frame = -2

Query: 170 EEAARAYDNAARRFRGSKAKTNFPPPDTDINKANGFFTNIR 48
           EEAARAYD+AAR  RG KAKTNFP   +     N  F  IR
Sbjct: 61  EEAARAYDSAARNLRGPKAKTNFPIDSSSPPPPNLRFNQIR 101




>sp|Q9ZWA2|ERF77_ARATH Ethylene-responsive transcription factor 10
           OS=Arabidopsis thaliana GN=ERF10 PE=2 SV=1
          Length = 245

 Score = 44.7 bits (104), Expect = 2e-04
 Identities = 21/24 (87%), Positives = 22/24 (91%)
 Frame = -2

Query: 170 EEAARAYDNAARRFRGSKAKTNFP 99
           EEAARAYD+AA RFRGSKA TNFP
Sbjct: 86  EEAARAYDSAAIRFRGSKATTNFP 109




>sp|Q9LUM4|RAP22_ARATH Ethylene-responsive transcription factor
           RAP2-2 OS=Arabidopsis thaliana GN=RAP2-2 PE=2 SV=2
          Length = 379

 Score = 43.5 bits (101), Expect = 4e-04
 Identities = 20/24 (83%), Positives = 21/24 (87%)
 Frame = -2

Query: 170 EEAARAYDNAARRFRGSKAKTNFP 99
           EEAARAYD AARR RG+KAK NFP
Sbjct: 161 EEAARAYDAAARRIRGTKAKVNFP 184




>sp|Q9M8M5|ERF84_ARATH Ethylene-responsive transcription factor
           ERF084 OS=Arabidopsis thaliana GN=ERF084 PE=2 SV=1
          Length = 256

 Score = 43.5 bits (101), Expect = 4e-04
 Identities = 21/26 (80%), Positives = 22/26 (84%)
 Frame = -2

Query: 170 EEAARAYDNAARRFRGSKAKTNFPPP 93
           EEAARAYD AARR RG+KAKTNF  P
Sbjct: 149 EEAARAYDAAARRLRGTKAKTNFVIP 174




>sp|Q6K7E6|ERF1_ORYSJ Ethylene-responsive transcription factor 1
           OS=Oryza sativa subsp. japonica GN=EREBP1 PE=1 SV=1
          Length = 365

 Score = 43.1 bits (100), Expect = 5e-04
 Identities = 21/32 (65%), Positives = 21/32 (65%)
 Frame = -2

Query: 170 EEAARAYDNAARRFRGSKAKTNFPPPDTDINK 75
           EEAARAYD  ARR RG KAK NFP   T   K
Sbjct: 153 EEAARAYDAEARRIRGKKAKVNFPEAPTTAQK 184




>sp|Q9SXS8|ERF3_TOBAC Ethylene-responsive transcription factor 3
           OS=Nicotiana tabacum GN=ERF3 PE=2 SV=1
          Length = 225

 Score = 42.7 bits (99), Expect = 7e-04
 Identities = 20/26 (76%), Positives = 21/26 (80%)
 Frame = -2

Query: 170 EEAARAYDNAARRFRGSKAKTNFPPP 93
           E+AARAYD AAR  RG KAKTNFP P
Sbjct: 61  EDAARAYDAAARALRGPKAKTNFPLP 86