miRNEST 2.0, an integrative microRNA resource :: BLAST
>41572_vvi-MIR159c:mirbase
Length = 190
Score = 65.9 bits (33), Expect = 1e-11
Identities = 67/77 (87%), Gaps = 1/77 (1%)
Strand = Plus / Plus
Query: 11 gtggagctccttgaagtccaaaggagggtcttggttgggtggattgagctgctggtttat 70
||||||||||||||||||||| ||||||||| ||||| ||||||||||||| ||||
Sbjct: 8 gtggagctccttgaagtccaatagagggtctt-actgggtagattgagctgctgacttat 66
Query: 71 ggattccactgccctat 87
|||| |||| |||||||
Sbjct: 67 ggatcccacagccctat 83
Score = 58.0 bits (29), Expect = 3e-09
Identities = 35/37 (94%)
Strand = Plus / Plus
Query: 136 ggataggcttgtggtttgcataactcaggagctgcat 172
|||||||||||||| ||||||| ||||||||||||||
Sbjct: 103 ggataggcttgtggcttgcatatctcaggagctgcat 139
>40397_ahy-MIR159:mirbase
Length = 197
Score = 65.9 bits (33), Expect = 1e-11
Identities = 49/53 (92%), Gaps = 1/53 (1%)
Strand = Plus / Plus
Query: 11 gtggagctccttgaagtccaaaggagggtcttggttgggtggattgagctgct 63
||||||||||||||||||||| ||||||||||| ||||| ||||||||||||
Sbjct: 2 gtggagctccttgaagtccaacagagggtcttgg-tgggtagattgagctgct 53
Score = 54.0 bits (27), Expect = 5e-08
Identities = 27/27 (100%)
Strand = Plus / Plus
Query: 189 ttatttggattgaagggagctctacat 215
|||||||||||||||||||||||||||
Sbjct: 154 ttatttggattgaagggagctctacat 180
>42635_tae-MIR159b:mirbase
Length = 255
Score = 58.0 bits (29), Expect = 3e-09
Identities = 71/85 (83%)
Strand = Plus / Plus
Query: 133 ttgggataggcttgtggtttgcataactcaggagctgcatcaacccaccctgacctttat 192
||||||||||||| ||| |||||| | |||||||||||||||||| | || | | |
Sbjct: 171 ttgggataggcttatggcttgcatgccccaggagctgcatcaaccctacatggaccctct 230
Query: 193 ttggattgaagggagctctacatct 217
||||||||||||||||||| |||||
Sbjct: 231 ttggattgaagggagctctgcatct 255
>41917_osa-MIR159a:mirbase
Length = 272
Score = 58.0 bits (29), Expect = 3e-09
Identities = 71/85 (83%)
Strand = Plus / Plus
Query: 133 ttgggataggcttgtggtttgcataactcaggagctgcatcaacccaccctgacctttat 192
||||||||||||| ||| |||||| | |||||||||||||||||| | || | | |
Sbjct: 183 ttgggataggcttatggcttgcatgccccaggagctgcatcaaccctacatggaccctct 242
Query: 193 ttggattgaagggagctctacatct 217
||||||||||||||||||| |||||
Sbjct: 243 ttggattgaagggagctctgcatct 267
>41916_osa-MIR159a:mirbase
Length = 272
Score = 58.0 bits (29), Expect = 3e-09
Identities = 71/85 (83%)
Strand = Plus / Plus
Query: 133 ttgggataggcttgtggtttgcataactcaggagctgcatcaacccaccctgacctttat 192
||||||||||||| ||| |||||| | |||||||||||||||||| | || | | |
Sbjct: 183 ttgggataggcttatggcttgcatgccccaggagctgcatcaaccctacatggaccctct 242
Query: 193 ttggattgaagggagctctacatct 217
||||||||||||||||||| |||||
Sbjct: 243 ttggattgaagggagctctgcatct 267
>40338_rco-MIR159:mirbase
Length = 180
Score = 58.0 bits (29), Expect = 3e-09
Identities = 66/77 (85%), Gaps = 1/77 (1%)
Strand = Plus / Plus
Query: 11 gtggagctccttgaagtccaaaggagggtcttggttgggtggattgagctgctggtttat 70
||||||||||||||||||||| |||| |||| | ||||| ||||||||||||| |||
Sbjct: 3 gtggagctccttgaagtccaatagaggatctt-gatgggtagattgagctgctgagctat 61
Query: 71 ggattccactgccctat 87
|||| |||| |||||||
Sbjct: 62 ggatcccacagccctat 78
Score = 52.0 bits (26), Expect = 2e-07
Identities = 26/26 (100%)
Strand = Plus / Plus
Query: 192 tttggattgaagggagctctacatct 217
||||||||||||||||||||||||||
Sbjct: 155 tttggattgaagggagctctacatct 180
Score = 50.1 bits (25), Expect = 7e-07
Identities = 31/33 (93%)
Strand = Plus / Plus
Query: 136 ggataggcttgtggtttgcataactcaggagct 168
|||||||||||||| ||||||| ||||||||||
Sbjct: 98 ggataggcttgtggcttgcatatctcaggagct 130
>40657_mtr-MIR159a:mirbase
Length = 183
Score = 54.0 bits (27), Expect = 5e-08
Identities = 30/31 (96%)
Strand = Plus / Plus
Query: 187 ctttatttggattgaagggagctctacatct 217
|||| ||||||||||||||||||||||||||
Sbjct: 147 ctttctttggattgaagggagctctacatct 177
>41918_osa-MIR159b:mirbase
Length = 188
Score = 52.0 bits (26), Expect = 2e-07
Identities = 69/82 (84%), Gaps = 1/82 (1%)
Strand = Plus / Plus
Query: 137 gataggcttgtggtttgcataactcaggagctgcatcaac-ccaccctgacctttatttg 195
|||||||||||||||||||| || |||||| | |||||| || |||||| | ||||
Sbjct: 102 gataggcttgtggtttgcatgaccaaggagccgaatcaactccttgctgaccactctttg 161
Query: 196 gattgaagggagctctacatct 217
|||||||||||||||| |||||
Sbjct: 162 gattgaagggagctctgcatct 183
>39804_aly-MIR159a:mirbase
Length = 222
Score = 52.0 bits (26), Expect = 2e-07
Identities = 26/26 (100%)
Strand = Plus / Plus
Query: 192 tttggattgaagggagctctacatct 217
||||||||||||||||||||||||||
Sbjct: 183 tttggattgaagggagctctacatct 208
>42695_zma-MIR159f:mirbase
Length = 215
Score = 50.1 bits (25), Expect = 7e-07
Identities = 37/41 (90%)
Strand = Plus / Plus
Query: 131 ttttgggataggcttgtggtttgcataactcaggagctgca 171
||||| |||||||||||||||||||| || ||||||||||
Sbjct: 132 ttttgagataggcttgtggtttgcatgaccgaggagctgca 172
>41024_pvu-MIR159a:mirbase
Length = 174
Score = 50.1 bits (25), Expect = 7e-07
Identities = 47/53 (88%), Gaps = 1/53 (1%)
Strand = Plus / Plus
Query: 11 gtggagctccttgaagtccaaaggagggtcttggttgggtggattgagctgct 63
||||||||||||||||||||| |||| |||| ||||||||||||||||||
Sbjct: 1 gtggagctccttgaagtccaattgaggatctt-actgggtggattgagctgct 52
Score = 44.1 bits (22), Expect = 4e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 192 tttggattgaagggagctctac 213
||||||||||||||||||||||
Sbjct: 153 tttggattgaagggagctctac 174
>41023_pvu-MIR159a:mirbase
Length = 174
Score = 50.1 bits (25), Expect = 7e-07
Identities = 47/53 (88%), Gaps = 1/53 (1%)
Strand = Plus / Plus
Query: 11 gtggagctccttgaagtccaaaggagggtcttggttgggtggattgagctgct 63
||||||||||||||||||||| |||| |||| ||||||||||||||||||
Sbjct: 1 gtggagctccttgaagtccaattgaggatctt-actgggtggattgagctgct 52
Score = 44.1 bits (22), Expect = 4e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 192 tttggattgaagggagctctac 213
||||||||||||||||||||||
Sbjct: 153 tttggattgaagggagctctac 174
>42690_zma-MIR159a:mirbase
Length = 246
Score = 48.1 bits (24), Expect = 3e-06
Identities = 36/40 (90%)
Strand = Plus / Plus
Query: 132 tttgggataggcttgtggtttgcataactcaggagctgca 171
|||| |||||||||||||||||||| || ||||||||||
Sbjct: 146 tttgagataggcttgtggtttgcatgaccgaggagctgca 185
Score = 42.1 bits (21), Expect = 2e-04
Identities = 24/25 (96%)
Strand = Plus / Plus
Query: 192 tttggattgaagggagctctacatc 216
|||||||||||||||||||| ||||
Sbjct: 207 tttggattgaagggagctctgcatc 231
>42494_sbi-MIR159:mirbase
Length = 226
Score = 48.1 bits (24), Expect = 3e-06
Identities = 36/40 (90%)
Strand = Plus / Plus
Query: 132 tttgggataggcttgtggtttgcataactcaggagctgca 171
|||| |||||||||||||||||||| || ||||||||||
Sbjct: 143 tttgagataggcttgtggtttgcatgaccgaggagctgca 182
Score = 40.1 bits (20), Expect = 7e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 192 tttggattgaagggagctct 211
||||||||||||||||||||
Sbjct: 204 tttggattgaagggagctct 223
>42468_ssp-MIR159a:mirbase
Length = 261
Score = 48.1 bits (24), Expect = 3e-06
Identities = 36/40 (90%)
Strand = Plus / Plus
Query: 132 tttgggataggcttgtggtttgcataactcaggagctgca 171
|||| |||||||||||||||||||| || ||||||||||
Sbjct: 162 tttgagataggcttgtggtttgcatgaccgaggagctgca 201
Score = 42.1 bits (21), Expect = 2e-04
Identities = 24/25 (96%)
Strand = Plus / Plus
Query: 192 tttggattgaagggagctctacatc 216
|||||||||||||||||||| ||||
Sbjct: 223 tttggattgaagggagctctgcatc 247
>42453_sof-MIR159b:mirbase
Length = 266
Score = 48.1 bits (24), Expect = 3e-06
Identities = 36/40 (90%)
Strand = Plus / Plus
Query: 132 tttgggataggcttgtggtttgcataactcaggagctgca 171
|||| |||||||||||||||||||| || ||||||||||
Sbjct: 166 tttgagataggcttgtggtttgcatgaccgaggagctgca 205
Score = 42.1 bits (21), Expect = 2e-04
Identities = 24/25 (96%)
Strand = Plus / Plus
Query: 192 tttggattgaagggagctctacatc 216
|||||||||||||||||||| ||||
Sbjct: 227 tttggattgaagggagctctgcatc 251
>42452_sof-MIR159a:mirbase
Length = 265
Score = 48.1 bits (24), Expect = 3e-06
Identities = 36/40 (90%)
Strand = Plus / Plus
Query: 132 tttgggataggcttgtggtttgcataactcaggagctgca 171
|||| |||||||||||||||||||| || ||||||||||
Sbjct: 165 tttgagataggcttgtggtttgcatgaccgaggagctgca 204
Score = 42.1 bits (21), Expect = 2e-04
Identities = 24/25 (96%)
Strand = Plus / Plus
Query: 192 tttggattgaagggagctctacatc 216
|||||||||||||||||||| ||||
Sbjct: 226 tttggattgaagggagctctgcatc 250
>41218_csi-MIR159:mirbase
Length = 216
Score = 48.1 bits (24), Expect = 3e-06
Identities = 27/28 (96%)
Strand = Plus / Plus
Query: 186 cctttatttggattgaagggagctctac 213
||||| ||||||||||||||||||||||
Sbjct: 180 cctttttttggattgaagggagctctac 207
Score = 46.1 bits (23), Expect = 1e-05
Identities = 26/27 (96%)
Strand = Plus / Plus
Query: 11 gtggagctccttgaagtccaaaggagg 37
|||||||||||||||||||||| ||||
Sbjct: 11 gtggagctccttgaagtccaaaagagg 37
>40432_gma-MIR159a:mirbase
Length = 214
Score = 46.1 bits (23), Expect = 1e-05
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 192 tttggattgaagggagctctaca 214
|||||||||||||||||||||||
Sbjct: 175 tttggattgaagggagctctaca 197
Score = 42.1 bits (21), Expect = 2e-04
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 11 gtggagctccttgaagtccaa 31
|||||||||||||||||||||
Sbjct: 20 gtggagctccttgaagtccaa 40
>40311_bra-MIR159a:mirbase
Length = 185
Score = 46.1 bits (23), Expect = 1e-05
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 192 tttggattgaagggagctctaca 214
|||||||||||||||||||||||
Sbjct: 163 tttggattgaagggagctctaca 185
>40261_bna-MIR159:mirbase
Length = 183
Score = 46.1 bits (23), Expect = 1e-05
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 192 tttggattgaagggagctctaca 214
|||||||||||||||||||||||
Sbjct: 161 tttggattgaagggagctctaca 183
>42691_zma-MIR159b:mirbase
Length = 221
Score = 44.1 bits (22), Expect = 4e-05
Identities = 25/26 (96%)
Strand = Plus / Plus
Query: 192 tttggattgaagggagctctacatct 217
|||||||||||||||||||| |||||
Sbjct: 182 tttggattgaagggagctctgcatct 207
>41922_osa-MIR159f:mirbase
Length = 188
Score = 44.1 bits (22), Expect = 4e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 193 ttggattgaagggagctctaca 214
||||||||||||||||||||||
Sbjct: 159 ttggattgaagggagctctaca 180
>41883_hvu-MIR159b:mirbase
Length = 122
Score = 44.1 bits (22), Expect = 4e-05
Identities = 25/26 (96%)
Strand = Plus / Plus
Query: 192 tttggattgaagggagctctacatct 217
|||||||||||||||||||| |||||
Sbjct: 11 tttggattgaagggagctctgcatct 36
>41868_far-MIR159:mirbase
Length = 200
Score = 44.1 bits (22), Expect = 4e-05
Identities = 25/26 (96%)
Strand = Plus / Plus
Query: 192 tttggattgaagggagctctacatct 217
|||||||||||||||||||| |||||
Sbjct: 169 tttggattgaagggagctctgcatct 194
>41300_ptc-MIR159b:mirbase
Length = 187
Score = 44.1 bits (22), Expect = 4e-05
Identities = 25/26 (96%)
Strand = Plus / Plus
Query: 187 ctttatttggattgaagggagctcta 212
|||| |||||||||||||||||||||
Sbjct: 153 ctttttttggattgaagggagctcta 178
Score = 42.1 bits (21), Expect = 2e-04
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 11 gtggagctccttgaagtccaa 31
|||||||||||||||||||||
Sbjct: 10 gtggagctccttgaagtccaa 30
>40017_ath-MIR159b:mirbase
Length = 196
Score = 44.1 bits (22), Expect = 4e-05
Identities = 25/26 (96%)
Strand = Plus / Plus
Query: 192 tttggattgaagggagctctacatct 217
|||||||||||||||||||| |||||
Sbjct: 168 tttggattgaagggagctcttcatct 193
>40016_ath-MIR159a:mirbase
Length = 184
Score = 44.1 bits (22), Expect = 4e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 192 tttggattgaagggagctctac 213
||||||||||||||||||||||
Sbjct: 163 tttggattgaagggagctctac 184
>39805_aly-MIR159b:mirbase
Length = 202
Score = 44.1 bits (22), Expect = 4e-05
Identities = 25/26 (96%)
Strand = Plus / Plus
Query: 192 tttggattgaagggagctctacatct 217
|||||||||||||||||||| |||||
Sbjct: 169 tttggattgaagggagctcttcatct 194
>42700_zma-MIR159k:mirbase
Length = 200
Score = 42.1 bits (21), Expect = 2e-04
Identities = 30/33 (90%)
Strand = Plus / Plus
Query: 141 ggcttgtggtttgcataactcaggagctgcatc 173
|||||||||||||||| || ||||||||||||
Sbjct: 126 ggcttgtggtttgcatgaccgaggagctgcatc 158
Score = 40.1 bits (20), Expect = 7e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 192 tttggattgaagggagctct 211
||||||||||||||||||||
Sbjct: 179 tttggattgaagggagctct 198
>42456_sof-MIR159e:mirbase
Length = 264
Score = 42.1 bits (21), Expect = 2e-04
Identities = 24/25 (96%)
Strand = Plus / Plus
Query: 132 tttgggataggcttgtggtttgcat 156
|||| ||||||||||||||||||||
Sbjct: 164 tttgagataggcttgtggtttgcat 188
