miRNEST 2.0, an integrative microRNA resource :: BLAST
>54777_vvi-miR159c:pmrd
Length = 190
Score = 65.9 bits (33), Expect = 1e-11
Identities = 67/77 (87%), Gaps = 1/77 (1%)
Strand = Plus / Plus
Query: 11 gtggagctccttgaagtccaaaggagggtcttggttgggtggattgagctgctggtttat 70
||||||||||||||||||||| ||||||||| ||||| ||||||||||||| ||||
Sbjct: 8 gtggagctccttgaagtccaatagagggtctt-actgggtagattgagctgctgacttat 66
Query: 71 ggattccactgccctat 87
|||| |||| |||||||
Sbjct: 67 ggatcccacagccctat 83
Score = 63.9 bits (32), Expect = 5e-11
Identities = 69/80 (86%), Gaps = 1/80 (1%)
Strand = Plus / Plus
Query: 136 ggataggcttgtggtttgcataactcaggagctgcatcaacccagcct-gacctttattt 194
|||||||||||||| ||||||| |||||||||||||| | || || | || | || |||
Sbjct: 103 ggataggcttgtggcttgcatatctcaggagctgcattatccaagtttagatccttgttt 162
Query: 195 ggattgaagggagctctaca 214
||||||||||||||||||||
Sbjct: 163 ggattgaagggagctctaca 182
>54674_tae-miR159b:pmrd
Length = 255
Score = 58.0 bits (29), Expect = 3e-09
Identities = 71/85 (83%)
Strand = Plus / Plus
Query: 133 ttgggataggcttgtggtttgcataactcaggagctgcatcaacccagcctgacctttat 192
||||||||||||| ||| |||||| | |||||||||||||||||| | || | | |
Sbjct: 171 ttgggataggcttatggcttgcatgccccaggagctgcatcaaccctacatggaccctct 230
Query: 193 ttggattgaagggagctctacatct 217
||||||||||||||||||| |||||
Sbjct: 231 ttggattgaagggagctctgcatct 255
>48819_osa-miR159a:pmrd
Length = 272
Score = 58.0 bits (29), Expect = 3e-09
Identities = 71/85 (83%)
Strand = Plus / Plus
Query: 133 ttgggataggcttgtggtttgcataactcaggagctgcatcaacccagcctgacctttat 192
||||||||||||| ||| |||||| | |||||||||||||||||| | || | | |
Sbjct: 183 ttgggataggcttatggcttgcatgccccaggagctgcatcaaccctacatggaccctct 242
Query: 193 ttggattgaagggagctctacatct 217
||||||||||||||||||| |||||
Sbjct: 243 ttggattgaagggagctctgcatct 267
>48796_oru-miR159:pmrd
Length = 274
Score = 58.0 bits (29), Expect = 3e-09
Identities = 71/85 (83%)
Strand = Plus / Plus
Query: 133 ttgggataggcttgtggtttgcataactcaggagctgcatcaacccagcctgacctttat 192
||||||||||||| ||| |||||| | |||||||||||||||||| | || | | |
Sbjct: 183 ttgggataggcttatggcttgcatgccccaggagctgcatcaaccctacatggaccctct 242
Query: 193 ttggattgaagggagctctacatct 217
||||||||||||||||||| |||||
Sbjct: 243 ttggattgaagggagctctgcatct 267
>48825_osa-miR159m:pmrd
Length = 249
Score = 54.0 bits (27), Expect = 5e-08
Identities = 66/79 (83%)
Strand = Plus / Plus
Query: 133 ttgggataggcttgtggtttgcataactcaggagctgcatcaacccagcctgacctttat 192
||||||||||||| ||| |||||| | |||||||||||||||||| | || | | |
Sbjct: 170 ttgggataggcttatggcttgcatgccccaggagctgcatcaaccctacatggaccctct 229
Query: 193 ttggattgaagggagctct 211
|||||||||||||||||||
Sbjct: 230 ttggattgaagggagctct 248
>48820_osa-miR159b:pmrd
Length = 188
Score = 52.0 bits (26), Expect = 2e-07
Identities = 69/82 (84%), Gaps = 1/82 (1%)
Strand = Plus / Plus
Query: 137 gataggcttgtggtttgcataactcaggagctgcatcaac-ccagcctgacctttatttg 195
|||||||||||||||||||| || |||||| | |||||| || |||||| | ||||
Sbjct: 102 gataggcttgtggtttgcatgaccaaggagccgaatcaactccttgctgaccactctttg 161
Query: 196 gattgaagggagctctacatct 217
|||||||||||||||| |||||
Sbjct: 162 gattgaagggagctctgcatct 183
>48701_mtr-miR159c:pmrd
Length = 44
Score = 52.0 bits (26), Expect = 2e-07
Identities = 26/26 (100%)
Strand = Plus / Plus
Query: 192 tttggattgaagggagctctacatct 217
||||||||||||||||||||||||||
Sbjct: 1 tttggattgaagggagctctacatct 26
>54378_pvu-miR159:pmrd
Length = 174
Score = 50.1 bits (25), Expect = 7e-07
Identities = 47/53 (88%), Gaps = 1/53 (1%)
Strand = Plus / Plus
Query: 11 gtggagctccttgaagtccaaaggagggtcttggttgggtggattgagctgct 63
||||||||||||||||||||| |||| |||| ||||||||||||||||||
Sbjct: 1 gtggagctccttgaagtccaattgaggatctt-actgggtggattgagctgct 52
Score = 44.1 bits (22), Expect = 4e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 192 tttggattgaagggagctctac 213
||||||||||||||||||||||
Sbjct: 153 tttggattgaagggagctctac 174
>54377_pvu-miR159:pmrd
Length = 174
Score = 50.1 bits (25), Expect = 7e-07
Identities = 47/53 (88%), Gaps = 1/53 (1%)
Strand = Plus / Plus
Query: 11 gtggagctccttgaagtccaaaggagggtcttggttgggtggattgagctgct 63
||||||||||||||||||||| |||| |||| ||||||||||||||||||
Sbjct: 1 gtggagctccttgaagtccaattgaggatctt-actgggtggattgagctgct 52
Score = 44.1 bits (22), Expect = 4e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 192 tttggattgaagggagctctac 213
||||||||||||||||||||||
Sbjct: 153 tttggattgaagggagctctac 174
>48728_mtr-miR319b:pmrd
Length = 42
Score = 50.1 bits (25), Expect = 7e-07
Identities = 25/25 (100%)
Strand = Plus / Plus
Query: 193 ttggattgaagggagctctacatct 217
|||||||||||||||||||||||||
Sbjct: 1 ttggattgaagggagctctacatct 25
>54930_zma-miR159a:pmrd
Length = 246
Score = 48.1 bits (24), Expect = 3e-06
Identities = 36/40 (90%)
Strand = Plus / Plus
Query: 132 tttgggataggcttgtggtttgcataactcaggagctgca 171
|||| |||||||||||||||||||| || ||||||||||
Sbjct: 146 tttgagataggcttgtggtttgcatgaccgaggagctgca 185
Score = 42.1 bits (21), Expect = 2e-04
Identities = 24/25 (96%)
Strand = Plus / Plus
Query: 192 tttggattgaagggagctctacatc 216
|||||||||||||||||||| ||||
Sbjct: 207 tttggattgaagggagctctgcatc 231
>54629_sof-miR159b:pmrd
Length = 266
Score = 48.1 bits (24), Expect = 3e-06
Identities = 36/40 (90%)
Strand = Plus / Plus
Query: 132 tttgggataggcttgtggtttgcataactcaggagctgca 171
|||| |||||||||||||||||||| || ||||||||||
Sbjct: 166 tttgagataggcttgtggtttgcatgaccgaggagctgca 205
Score = 42.1 bits (21), Expect = 2e-04
Identities = 24/25 (96%)
Strand = Plus / Plus
Query: 192 tttggattgaagggagctctacatc 216
|||||||||||||||||||| ||||
Sbjct: 227 tttggattgaagggagctctgcatc 251
>54628_sof-miR159a:pmrd
Length = 265
Score = 48.1 bits (24), Expect = 3e-06
Identities = 36/40 (90%)
Strand = Plus / Plus
Query: 132 tttgggataggcttgtggtttgcataactcaggagctgca 171
|||| |||||||||||||||||||| || ||||||||||
Sbjct: 165 tttgagataggcttgtggtttgcatgaccgaggagctgca 204
Score = 42.1 bits (21), Expect = 2e-04
Identities = 24/25 (96%)
Strand = Plus / Plus
Query: 192 tttggattgaagggagctctacatc 216
|||||||||||||||||||| ||||
Sbjct: 226 tttggattgaagggagctctgcatc 250
>48686_ltu-miR159:pmrd
Length = 345
Score = 46.1 bits (23), Expect = 1e-05
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 192 tttggattgaagggagctctaca 214
|||||||||||||||||||||||
Sbjct: 1 tttggattgaagggagctctaca 23
>48539_gma-miR159a:pmrd
Length = 214
Score = 46.1 bits (23), Expect = 1e-05
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 192 tttggattgaagggagctctaca 214
|||||||||||||||||||||||
Sbjct: 175 tttggattgaagggagctctaca 197
Score = 42.1 bits (21), Expect = 2e-04
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 11 gtggagctccttgaagtccaa 31
|||||||||||||||||||||
Sbjct: 20 gtggagctccttgaagtccaa 40
>48395_bra-miR159a:pmrd
Length = 185
Score = 46.1 bits (23), Expect = 1e-05
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 192 tttggattgaagggagctctaca 214
|||||||||||||||||||||||
Sbjct: 163 tttggattgaagggagctctaca 185
>48339_bna-miR159:pmrd
Length = 183
Score = 46.1 bits (23), Expect = 1e-05
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 192 tttggattgaagggagctctaca 214
|||||||||||||||||||||||
Sbjct: 161 tttggattgaagggagctctaca 183
>54931_zma-miR159b:pmrd
Length = 221
Score = 44.1 bits (22), Expect = 4e-05
Identities = 25/26 (96%)
Strand = Plus / Plus
Query: 192 tttggattgaagggagctctacatct 217
|||||||||||||||||||| |||||
Sbjct: 182 tttggattgaagggagctctgcatct 207
>51603_ptc-miR159b:pmrd
Length = 187
Score = 44.1 bits (22), Expect = 4e-05
Identities = 25/26 (96%)
Strand = Plus / Plus
Query: 187 ctttatttggattgaagggagctcta 212
|||| |||||||||||||||||||||
Sbjct: 153 ctttttttggattgaagggagctcta 178
Score = 42.1 bits (21), Expect = 2e-04
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 11 gtggagctccttgaagtccaa 31
|||||||||||||||||||||
Sbjct: 10 gtggagctccttgaagtccaa 30
>48824_osa-miR159f:pmrd
Length = 188
Score = 44.1 bits (22), Expect = 4e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 193 ttggattgaagggagctctaca 214
||||||||||||||||||||||
Sbjct: 159 ttggattgaagggagctctaca 180
>48699_mtr-miR159a:pmrd
Length = 168
Score = 44.1 bits (22), Expect = 4e-05
Identities = 25/26 (96%)
Strand = Plus / Plus
Query: 187 ctttatttggattgaagggagctcta 212
|||| |||||||||||||||||||||
Sbjct: 143 ctttctttggattgaagggagctcta 168
>48656_hvv-miR159a:pmrd
Length = 303
Score = 44.1 bits (22), Expect = 4e-05
Identities = 25/26 (96%)
Strand = Plus / Plus
Query: 192 tttggattgaagggagctctacatct 217
|||||||||||||||||||| |||||
Sbjct: 1 tttggattgaagggagctctgcatct 26
>46932_ath-miR159b:pmrd
Length = 196
Score = 44.1 bits (22), Expect = 4e-05
Identities = 25/26 (96%)
Strand = Plus / Plus
Query: 192 tttggattgaagggagctctacatct 217
|||||||||||||||||||| |||||
Sbjct: 168 tttggattgaagggagctcttcatct 193
>46931_ath-miR159a:pmrd
Length = 184
Score = 44.1 bits (22), Expect = 4e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 192 tttggattgaagggagctctac 213
||||||||||||||||||||||
Sbjct: 163 tttggattgaagggagctctac 184
>54937_zma-miR159m:pmrd
Length = 457
Score = 42.1 bits (21), Expect = 2e-04
Identities = 24/25 (96%)
Strand = Plus / Plus
Query: 192 tttggattgaagggagctctacatc 216
|||||||||||||||||||| ||||
Sbjct: 1 tttggattgaagggagctctgcatc 25
>54653_spr-miR159:pmrd
Length = 392
Score = 42.1 bits (21), Expect = 2e-04
Identities = 24/25 (96%)
Strand = Plus / Plus
Query: 192 tttggattgaagggagctctacatc 216
|||||||||||||||||||| ||||
Sbjct: 1 tttggattgaagggagctctgcatc 25
>54632_sof-miR159e:pmrd
Length = 264
Score = 42.1 bits (21), Expect = 2e-04
Identities = 24/25 (96%)
Strand = Plus / Plus
Query: 132 tttgggataggcttgtggtttgcat 156
|||| ||||||||||||||||||||
Sbjct: 164 tttgagataggcttgtggtttgcat 188
>54631_sof-miR159d:pmrd
Length = 265
Score = 42.1 bits (21), Expect = 2e-04
Identities = 24/25 (96%)
Strand = Plus / Plus
Query: 192 tttggattgaagggagctctacatc 216
|||||||||||||||||||| ||||
Sbjct: 226 tttggattgaagggagctctgcatc 250
>54540_sly-miR159:pmrd
Length = 177
Score = 42.1 bits (21), Expect = 2e-04
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 192 tttggattgaagggagctcta 212
|||||||||||||||||||||
Sbjct: 157 tttggattgaagggagctcta 177
Score = 40.1 bits (20), Expect = 7e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 12 tggagctccttgaagtccaa 31
||||||||||||||||||||
Sbjct: 1 tggagctccttgaagtccaa 20
>52093_ptc-miRf10271-akr:pmrd
Length = 174
Score = 42.1 bits (21), Expect = 2e-04
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 11 gtggagctccttgaagtccaa 31
|||||||||||||||||||||
Sbjct: 5 gtggagctccttgaagtccaa 25
Score = 42.1 bits (21), Expect = 2e-04
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 192 tttggattgaagggagctcta 212
|||||||||||||||||||||
Sbjct: 149 tttggattgaagggagctcta 169
>51604_ptc-miR159c:pmrd
Length = 183
Score = 42.1 bits (21), Expect = 2e-04
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 11 gtggagctccttgaagtccaa 31
|||||||||||||||||||||
Sbjct: 10 gtggagctccttgaagtccaa 30
Score = 42.1 bits (21), Expect = 2e-04
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 192 tttggattgaagggagctcta 212
|||||||||||||||||||||
Sbjct: 154 tttggattgaagggagctcta 174
>51602_ptc-miR159a:pmrd
Length = 183
Score = 42.1 bits (21), Expect = 2e-04
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 11 gtggagctccttgaagtccaa 31
|||||||||||||||||||||
Sbjct: 10 gtggagctccttgaagtccaa 30
Score = 42.1 bits (21), Expect = 2e-04
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 192 tttggattgaagggagctcta 212
|||||||||||||||||||||
Sbjct: 154 tttggattgaagggagctcta 174
>48821_osa-miR159c:pmrd
Length = 197
Score = 42.1 bits (21), Expect = 2e-04
Identities = 24/25 (96%)
Strand = Plus / Plus
Query: 193 ttggattgaagggagctctacatct 217
|||||||||||||||||| ||||||
Sbjct: 168 ttggattgaagggagctccacatct 192
