miRNEST 2.0, an integrative microRNA resource :: BLAST
>41572_vvi-MIR159c:mirbase
Length = 190
Score = 71.9 bits (36), Expect = 2e-13
Identities = 70/80 (87%), Gaps = 1/80 (1%)
Strand = Plus / Plus
Query: 133 ggataggcttgtggtttgcataactcaggagctgcatcagcccagcct-gacccttattt 191
|||||||||||||| ||||||| |||||||||||||| | || || | || |||| |||
Sbjct: 103 ggataggcttgtggcttgcatatctcaggagctgcattatccaagtttagatccttgttt 162
Query: 192 ggattgaagggagctctaca 211
||||||||||||||||||||
Sbjct: 163 ggattgaagggagctctaca 182
Score = 42.1 bits (21), Expect = 2e-04
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 21 gtggagctccttgaagtccaa 41
|||||||||||||||||||||
Sbjct: 8 gtggagctccttgaagtccaa 28
>42635_tae-MIR159b:mirbase
Length = 255
Score = 58.0 bits (29), Expect = 3e-09
Identities = 71/85 (83%)
Strand = Plus / Plus
Query: 130 ttgggataggcttgtggtttgcataactcaggagctgcatcagcccagcctgacccttat 189
||||||||||||| ||| |||||| | |||||||||||||| ||| | || || | |
Sbjct: 171 ttgggataggcttatggcttgcatgccccaggagctgcatcaaccctacatggaccctct 230
Query: 190 ttggattgaagggagctctacatct 214
||||||||||||||||||| |||||
Sbjct: 231 ttggattgaagggagctctgcatct 255
>41917_osa-MIR159a:mirbase
Length = 272
Score = 58.0 bits (29), Expect = 3e-09
Identities = 71/85 (83%)
Strand = Plus / Plus
Query: 130 ttgggataggcttgtggtttgcataactcaggagctgcatcagcccagcctgacccttat 189
||||||||||||| ||| |||||| | |||||||||||||| ||| | || || | |
Sbjct: 183 ttgggataggcttatggcttgcatgccccaggagctgcatcaaccctacatggaccctct 242
Query: 190 ttggattgaagggagctctacatct 214
||||||||||||||||||| |||||
Sbjct: 243 ttggattgaagggagctctgcatct 267
>41916_osa-MIR159a:mirbase
Length = 272
Score = 58.0 bits (29), Expect = 3e-09
Identities = 71/85 (83%)
Strand = Plus / Plus
Query: 130 ttgggataggcttgtggtttgcataactcaggagctgcatcagcccagcctgacccttat 189
||||||||||||| ||| |||||| | |||||||||||||| ||| | || || | |
Sbjct: 183 ttgggataggcttatggcttgcatgccccaggagctgcatcaaccctacatggaccctct 242
Query: 190 ttggattgaagggagctctacatct 214
||||||||||||||||||| |||||
Sbjct: 243 ttggattgaagggagctctgcatct 267
>40397_ahy-MIR159:mirbase
Length = 197
Score = 58.0 bits (29), Expect = 3e-09
Identities = 29/29 (100%)
Strand = Plus / Plus
Query: 184 ccttatttggattgaagggagctctacat 212
|||||||||||||||||||||||||||||
Sbjct: 152 ccttatttggattgaagggagctctacat 180
Score = 42.1 bits (21), Expect = 2e-04
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 21 gtggagctccttgaagtccaa 41
|||||||||||||||||||||
Sbjct: 2 gtggagctccttgaagtccaa 22
>40338_rco-MIR159:mirbase
Length = 180
Score = 54.0 bits (27), Expect = 5e-08
Identities = 30/31 (96%)
Strand = Plus / Plus
Query: 184 ccttatttggattgaagggagctctacatct 214
|||| ||||||||||||||||||||||||||
Sbjct: 150 ccttgtttggattgaagggagctctacatct 180
Score = 50.1 bits (25), Expect = 8e-07
Identities = 31/33 (93%)
Strand = Plus / Plus
Query: 133 ggataggcttgtggtttgcataactcaggagct 165
|||||||||||||| ||||||| ||||||||||
Sbjct: 98 ggataggcttgtggcttgcatatctcaggagct 130
Score = 42.1 bits (21), Expect = 2e-04
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 21 gtggagctccttgaagtccaa 41
|||||||||||||||||||||
Sbjct: 3 gtggagctccttgaagtccaa 23
>40657_mtr-MIR159a:mirbase
Length = 183
Score = 52.0 bits (26), Expect = 2e-07
Identities = 26/26 (100%)
Strand = Plus / Plus
Query: 189 tttggattgaagggagctctacatct 214
||||||||||||||||||||||||||
Sbjct: 152 tttggattgaagggagctctacatct 177
>39804_aly-MIR159a:mirbase
Length = 222
Score = 52.0 bits (26), Expect = 2e-07
Identities = 26/26 (100%)
Strand = Plus / Plus
Query: 189 tttggattgaagggagctctacatct 214
||||||||||||||||||||||||||
Sbjct: 183 tttggattgaagggagctctacatct 208
>42695_zma-MIR159f:mirbase
Length = 215
Score = 48.1 bits (24), Expect = 3e-06
Identities = 36/40 (90%)
Strand = Plus / Plus
Query: 129 tttgggataggcttgtggtttgcataactcaggagctgca 168
|||| |||||||||||||||||||| || ||||||||||
Sbjct: 133 tttgagataggcttgtggtttgcatgaccgaggagctgca 172
>42690_zma-MIR159a:mirbase
Length = 246
Score = 48.1 bits (24), Expect = 3e-06
Identities = 36/40 (90%)
Strand = Plus / Plus
Query: 129 tttgggataggcttgtggtttgcataactcaggagctgca 168
|||| |||||||||||||||||||| || ||||||||||
Sbjct: 146 tttgagataggcttgtggtttgcatgaccgaggagctgca 185
Score = 42.1 bits (21), Expect = 2e-04
Identities = 24/25 (96%)
Strand = Plus / Plus
Query: 189 tttggattgaagggagctctacatc 213
|||||||||||||||||||| ||||
Sbjct: 207 tttggattgaagggagctctgcatc 231
>42494_sbi-MIR159:mirbase
Length = 226
Score = 48.1 bits (24), Expect = 3e-06
Identities = 36/40 (90%)
Strand = Plus / Plus
Query: 129 tttgggataggcttgtggtttgcataactcaggagctgca 168
|||| |||||||||||||||||||| || ||||||||||
Sbjct: 143 tttgagataggcttgtggtttgcatgaccgaggagctgca 182
Score = 40.1 bits (20), Expect = 7e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 189 tttggattgaagggagctct 208
||||||||||||||||||||
Sbjct: 204 tttggattgaagggagctct 223
>42468_ssp-MIR159a:mirbase
Length = 261
Score = 48.1 bits (24), Expect = 3e-06
Identities = 36/40 (90%)
Strand = Plus / Plus
Query: 129 tttgggataggcttgtggtttgcataactcaggagctgca 168
|||| |||||||||||||||||||| || ||||||||||
Sbjct: 162 tttgagataggcttgtggtttgcatgaccgaggagctgca 201
Score = 42.1 bits (21), Expect = 2e-04
Identities = 24/25 (96%)
Strand = Plus / Plus
Query: 189 tttggattgaagggagctctacatc 213
|||||||||||||||||||| ||||
Sbjct: 223 tttggattgaagggagctctgcatc 247
>42453_sof-MIR159b:mirbase
Length = 266
Score = 48.1 bits (24), Expect = 3e-06
Identities = 36/40 (90%)
Strand = Plus / Plus
Query: 129 tttgggataggcttgtggtttgcataactcaggagctgca 168
|||| |||||||||||||||||||| || ||||||||||
Sbjct: 166 tttgagataggcttgtggtttgcatgaccgaggagctgca 205
Score = 42.1 bits (21), Expect = 2e-04
Identities = 24/25 (96%)
Strand = Plus / Plus
Query: 189 tttggattgaagggagctctacatc 213
|||||||||||||||||||| ||||
Sbjct: 227 tttggattgaagggagctctgcatc 251
>42452_sof-MIR159a:mirbase
Length = 265
Score = 48.1 bits (24), Expect = 3e-06
Identities = 36/40 (90%)
Strand = Plus / Plus
Query: 129 tttgggataggcttgtggtttgcataactcaggagctgca 168
|||| |||||||||||||||||||| || ||||||||||
Sbjct: 165 tttgagataggcttgtggtttgcatgaccgaggagctgca 204
Score = 42.1 bits (21), Expect = 2e-04
Identities = 24/25 (96%)
Strand = Plus / Plus
Query: 189 tttggattgaagggagctctacatc 213
|||||||||||||||||||| ||||
Sbjct: 226 tttggattgaagggagctctgcatc 250
>40432_gma-MIR159a:mirbase
Length = 214
Score = 48.1 bits (24), Expect = 3e-06
Identities = 27/28 (96%)
Strand = Plus / Plus
Query: 184 ccttatttggattgaagggagctctaca 211
|||| |||||||||||||||||||||||
Sbjct: 170 ccttctttggattgaagggagctctaca 197
Score = 42.1 bits (21), Expect = 2e-04
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 21 gtggagctccttgaagtccaa 41
|||||||||||||||||||||
Sbjct: 20 gtggagctccttgaagtccaa 40
>41024_pvu-MIR159a:mirbase
Length = 174
Score = 46.1 bits (23), Expect = 1e-05
Identities = 26/27 (96%)
Strand = Plus / Plus
Query: 184 ccttatttggattgaagggagctctac 210
|||| ||||||||||||||||||||||
Sbjct: 148 ccttctttggattgaagggagctctac 174
Score = 42.1 bits (21), Expect = 2e-04
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 21 gtggagctccttgaagtccaa 41
|||||||||||||||||||||
Sbjct: 1 gtggagctccttgaagtccaa 21
>41023_pvu-MIR159a:mirbase
Length = 174
Score = 46.1 bits (23), Expect = 1e-05
Identities = 26/27 (96%)
Strand = Plus / Plus
Query: 184 ccttatttggattgaagggagctctac 210
|||| ||||||||||||||||||||||
Sbjct: 148 ccttctttggattgaagggagctctac 174
Score = 42.1 bits (21), Expect = 2e-04
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 21 gtggagctccttgaagtccaa 41
|||||||||||||||||||||
Sbjct: 1 gtggagctccttgaagtccaa 21
>40311_bra-MIR159a:mirbase
Length = 185
Score = 46.1 bits (23), Expect = 1e-05
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 189 tttggattgaagggagctctaca 211
|||||||||||||||||||||||
Sbjct: 163 tttggattgaagggagctctaca 185
>40261_bna-MIR159:mirbase
Length = 183
Score = 46.1 bits (23), Expect = 1e-05
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 189 tttggattgaagggagctctaca 211
|||||||||||||||||||||||
Sbjct: 161 tttggattgaagggagctctaca 183
>42691_zma-MIR159b:mirbase
Length = 221
Score = 44.1 bits (22), Expect = 5e-05
Identities = 25/26 (96%)
Strand = Plus / Plus
Query: 189 tttggattgaagggagctctacatct 214
|||||||||||||||||||| |||||
Sbjct: 182 tttggattgaagggagctctgcatct 207
>41922_osa-MIR159f:mirbase
Length = 188
Score = 44.1 bits (22), Expect = 5e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 190 ttggattgaagggagctctaca 211
||||||||||||||||||||||
Sbjct: 159 ttggattgaagggagctctaca 180
>41918_osa-MIR159b:mirbase
Length = 188
Score = 44.1 bits (22), Expect = 5e-05
Identities = 25/26 (96%)
Strand = Plus / Plus
Query: 189 tttggattgaagggagctctacatct 214
|||||||||||||||||||| |||||
Sbjct: 158 tttggattgaagggagctctgcatct 183
>41883_hvu-MIR159b:mirbase
Length = 122
Score = 44.1 bits (22), Expect = 5e-05
Identities = 25/26 (96%)
Strand = Plus / Plus
Query: 189 tttggattgaagggagctctacatct 214
|||||||||||||||||||| |||||
Sbjct: 11 tttggattgaagggagctctgcatct 36
>41868_far-MIR159:mirbase
Length = 200
Score = 44.1 bits (22), Expect = 5e-05
Identities = 25/26 (96%)
Strand = Plus / Plus
Query: 189 tttggattgaagggagctctacatct 214
|||||||||||||||||||| |||||
Sbjct: 169 tttggattgaagggagctctgcatct 194
>41218_csi-MIR159:mirbase
Length = 216
Score = 44.1 bits (22), Expect = 5e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 21 gtggagctccttgaagtccaaa 42
||||||||||||||||||||||
Sbjct: 11 gtggagctccttgaagtccaaa 32
Score = 44.1 bits (22), Expect = 5e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 189 tttggattgaagggagctctac 210
||||||||||||||||||||||
Sbjct: 186 tttggattgaagggagctctac 207
>40017_ath-MIR159b:mirbase
Length = 196
Score = 44.1 bits (22), Expect = 5e-05
Identities = 25/26 (96%)
Strand = Plus / Plus
Query: 189 tttggattgaagggagctctacatct 214
|||||||||||||||||||| |||||
Sbjct: 168 tttggattgaagggagctcttcatct 193
>40016_ath-MIR159a:mirbase
Length = 184
Score = 44.1 bits (22), Expect = 5e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 189 tttggattgaagggagctctac 210
||||||||||||||||||||||
Sbjct: 163 tttggattgaagggagctctac 184
>39805_aly-MIR159b:mirbase
Length = 202
Score = 44.1 bits (22), Expect = 5e-05
Identities = 25/26 (96%)
Strand = Plus / Plus
Query: 189 tttggattgaagggagctctacatct 214
|||||||||||||||||||| |||||
Sbjct: 169 tttggattgaagggagctcttcatct 194
>42700_zma-MIR159k:mirbase
Length = 200
Score = 42.1 bits (21), Expect = 2e-04
Identities = 30/33 (90%)
Strand = Plus / Plus
Query: 138 ggcttgtggtttgcataactcaggagctgcatc 170
|||||||||||||||| || ||||||||||||
Sbjct: 126 ggcttgtggtttgcatgaccgaggagctgcatc 158
Score = 40.1 bits (20), Expect = 7e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 189 tttggattgaagggagctct 208
||||||||||||||||||||
Sbjct: 179 tttggattgaagggagctct 198
>42456_sof-MIR159e:mirbase
Length = 264
Score = 42.1 bits (21), Expect = 2e-04
Identities = 24/25 (96%)
Strand = Plus / Plus
Query: 129 tttgggataggcttgtggtttgcat 153
|||| ||||||||||||||||||||
Sbjct: 164 tttgagataggcttgtggtttgcat 188
>42455_sof-MIR159d:mirbase
Length = 265
Score = 42.1 bits (21), Expect = 2e-04
Identities = 24/25 (96%)
Strand = Plus / Plus
Query: 189 tttggattgaagggagctctacatc 213
|||||||||||||||||||| ||||
Sbjct: 226 tttggattgaagggagctctgcatc 250
>41919_osa-MIR159c:mirbase
Length = 197
Score = 42.1 bits (21), Expect = 2e-04
Identities = 24/25 (96%)
Strand = Plus / Plus
Query: 190 ttggattgaagggagctctacatct 214
|||||||||||||||||| ||||||
Sbjct: 168 ttggattgaagggagctccacatct 192
>41528_sly-MIR159:mirbase
Length = 177
Score = 42.1 bits (21), Expect = 2e-04
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 189 tttggattgaagggagctcta 209
|||||||||||||||||||||
Sbjct: 157 tttggattgaagggagctcta 177
Score = 40.1 bits (20), Expect = 7e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 22 tggagctccttgaagtccaa 41
||||||||||||||||||||
Sbjct: 1 tggagctccttgaagtccaa 20
>41301_ptc-MIR159c:mirbase
Length = 183
Score = 42.1 bits (21), Expect = 2e-04
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 21 gtggagctccttgaagtccaa 41
|||||||||||||||||||||
Sbjct: 10 gtggagctccttgaagtccaa 30
Score = 42.1 bits (21), Expect = 2e-04
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 189 tttggattgaagggagctcta 209
|||||||||||||||||||||
Sbjct: 154 tttggattgaagggagctcta 174
>41300_ptc-MIR159b:mirbase
Length = 187
Score = 42.1 bits (21), Expect = 2e-04
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 21 gtggagctccttgaagtccaa 41
|||||||||||||||||||||
Sbjct: 10 gtggagctccttgaagtccaa 30
Score = 42.1 bits (21), Expect = 2e-04
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 189 tttggattgaagggagctcta 209
|||||||||||||||||||||
Sbjct: 158 tttggattgaagggagctcta 178
>41299_ptc-MIR159a:mirbase
Length = 183
Score = 42.1 bits (21), Expect = 2e-04
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 21 gtggagctccttgaagtccaa 41
|||||||||||||||||||||
Sbjct: 10 gtggagctccttgaagtccaa 30
Score = 42.1 bits (21), Expect = 2e-04
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 189 tttggattgaagggagctcta 209
|||||||||||||||||||||
Sbjct: 154 tttggattgaagggagctcta 174
